View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16887_low_4 (Length: 319)

Name: NF16887_low_4
Description: NF16887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16887_low_4
NF16887_low_4
[»] chr7 (23 HSPs)
chr7 (11-199)||(40949928-40950116)
chr7 (155-199)||(40693556-40693600)
chr7 (152-193)||(37385267-37385308)
chr7 (157-194)||(38547312-38547349)
chr7 (153-193)||(37392040-37392080)
chr7 (151-194)||(2323299-2323342)
chr7 (154-193)||(30391157-30391196)
chr7 (265-304)||(40949823-40949862)
chr7 (155-194)||(45420082-45420121)
chr7 (151-189)||(47905154-47905192)
chr7 (156-193)||(8742394-8742431)
chr7 (153-194)||(23848086-23848127)
chr7 (152-193)||(23910285-23910326)
chr7 (156-193)||(26153646-26153683)
chr7 (152-193)||(27704431-27704472)
chr7 (157-193)||(44216174-44216211)
chr7 (153-193)||(23389627-23389667)
chr7 (150-194)||(26041315-26041359)
chr7 (154-182)||(27331072-27331100)
chr7 (154-194)||(28030884-28030924)
chr7 (153-193)||(33845039-33845079)
chr7 (159-199)||(34304706-34304746)
chr7 (153-193)||(48395245-48395285)
[»] chr5 (22 HSPs)
chr5 (152-199)||(34428156-34428203)
chr5 (153-193)||(29803222-29803262)
chr5 (153-193)||(36572688-36572728)
chr5 (151-194)||(14206395-14206438)
chr5 (152-193)||(19844343-19844384)
chr5 (155-199)||(36548408-36548452)
chr5 (154-193)||(32872932-32872971)
chr5 (151-193)||(3960203-3960245)
chr5 (153-199)||(5996664-5996710)
chr5 (159-193)||(25561048-25561082)
chr5 (152-194)||(38919859-38919901)
chr5 (155-193)||(42446325-42446363)
chr5 (152-193)||(125088-125129)
chr5 (149-194)||(372742-372787)
chr5 (156-193)||(2629818-2629855)
chr5 (152-189)||(4434478-4434515)
chr5 (150-199)||(11881015-11881064)
chr5 (156-193)||(31748336-31748373)
chr5 (153-186)||(35165676-35165709)
chr5 (156-193)||(42643244-42643281)
chr5 (155-191)||(14508193-14508229)
chr5 (151-191)||(20270565-20270605)
[»] chr3 (31 HSPs)
chr3 (153-199)||(45528970-45529016)
chr3 (151-193)||(50559246-50559288)
chr3 (154-193)||(44855249-44855288)
chr3 (151-193)||(7867745-7867787)
chr3 (157-193)||(3282534-3282570)
chr3 (153-193)||(32146020-32146060)
chr3 (155-199)||(36869865-36869909)
chr3 (154-194)||(44937217-44937257)
chr3 (155-194)||(11056944-11056983)
chr3 (151-190)||(32575429-32575468)
chr3 (151-194)||(46952944-46952987)
chr3 (155-194)||(50876384-50876423)
chr3 (155-193)||(36799397-36799435)
chr3 (155-193)||(41637314-41637352)
chr3 (156-193)||(25188499-25188536)
chr3 (152-193)||(34456786-34456827)
chr3 (156-193)||(37988632-37988669)
chr3 (152-193)||(53392098-53392139)
chr3 (151-199)||(1901954-1902002)
chr3 (151-199)||(1911400-1911448)
chr3 (153-193)||(8254024-8254064)
chr3 (155-199)||(8868871-8868915)
chr3 (153-193)||(34627916-34627955)
chr3 (152-199)||(37035611-37035659)
chr3 (153-193)||(40159872-40159912)
chr3 (157-193)||(40499737-40499773)
chr3 (152-180)||(46323149-46323177)
chr3 (153-193)||(49196693-49196733)
chr3 (153-193)||(54134849-54134889)
chr3 (148-192)||(55344331-55344375)
chr3 (154-194)||(55361255-55361295)
[»] chr4 (29 HSPs)
chr4 (154-199)||(42853937-42853982)
chr4 (153-193)||(44272844-44272884)
chr4 (151-194)||(4511820-4511863)
chr4 (154-194)||(33093137-33093177)
chr4 (156-194)||(4974111-4974149)
chr4 (153-199)||(18874950-18874995)
chr4 (151-189)||(23667870-23667908)
chr4 (155-193)||(35017152-35017190)
chr4 (155-193)||(47014938-47014976)
chr4 (152-193)||(3316346-3316387)
chr4 (156-189)||(9776370-9776403)
chr4 (156-193)||(23220335-23220372)
chr4 (152-193)||(33278671-33278712)
chr4 (152-193)||(33820370-33820411)
chr4 (153-194)||(37393339-37393380)
chr4 (156-193)||(41154048-41154085)
chr4 (157-193)||(1368192-1368228)
chr4 (156-184)||(4701533-4701561)
chr4 (153-193)||(20760252-20760292)
chr4 (153-193)||(20766643-20766683)
chr4 (154-194)||(31413808-31413848)
chr4 (150-182)||(32079121-32079153)
chr4 (146-194)||(32365689-32365737)
chr4 (146-194)||(32621628-32621676)
chr4 (153-193)||(38864770-38864810)
chr4 (154-194)||(41262651-41262691)
chr4 (153-193)||(42815401-42815441)
chr4 (141-193)||(51255731-51255783)
chr4 (145-193)||(53583162-53583210)
[»] chr6 (20 HSPs)
chr6 (145-193)||(27334847-27334895)
chr6 (145-193)||(27395587-27395635)
chr6 (150-194)||(32644617-32644661)
chr6 (154-199)||(12044330-12044375)
chr6 (156-193)||(12280440-12280477)
chr6 (153-189)||(9083099-9083135)
chr6 (145-193)||(17551413-17551461)
chr6 (153-193)||(30767300-30767340)
chr6 (150-193)||(32729883-32729926)
chr6 (152-194)||(12441534-12441576)
chr6 (155-193)||(17902726-17902764)
chr6 (266-304)||(32644724-32644762)
chr6 (156-193)||(958696-958733)
chr6 (154-199)||(9188972-9189017)
chr6 (152-189)||(12280706-12280743)
chr6 (152-193)||(13658326-13658367)
chr6 (153-193)||(2060656-2060696)
chr6 (153-193)||(3180026-3180066)
chr6 (153-193)||(3339533-3339573)
chr6 (151-199)||(11743010-11743058)
[»] chr1 (18 HSPs)
chr1 (150-193)||(18610767-18610810)
chr1 (154-193)||(35883641-35883680)
chr1 (154-193)||(37843466-37843505)
chr1 (148-199)||(48872371-48872422)
chr1 (155-193)||(3697177-3697215)
chr1 (152-194)||(43612102-43612144)
chr1 (156-194)||(48872050-48872088)
chr1 (154-199)||(16987445-16987490)
chr1 (150-199)||(25989012-25989061)
chr1 (153-194)||(40596076-40596117)
chr1 (152-193)||(42256456-42256497)
chr1 (153-193)||(7078534-7078574)
chr1 (153-193)||(9011642-9011682)
chr1 (157-193)||(9897596-9897632)
chr1 (149-193)||(27742610-27742654)
chr1 (154-194)||(45272182-45272222)
chr1 (153-193)||(48983702-48983742)
chr1 (153-193)||(49804969-49805009)
[»] chr8 (15 HSPs)
chr8 (151-192)||(13885770-13885811)
chr8 (154-199)||(36497659-36497704)
chr8 (152-193)||(41955925-41955966)
chr8 (154-194)||(14233666-14233706)
chr8 (154-194)||(37392150-37392190)
chr8 (154-193)||(13592764-13592803)
chr8 (150-193)||(30170763-30170806)
chr8 (151-194)||(40413371-40413414)
chr8 (152-193)||(5772006-5772047)
chr8 (152-193)||(7678728-7678769)
chr8 (156-193)||(23265377-23265414)
chr8 (148-193)||(45101388-45101433)
chr8 (155-199)||(37562169-37562213)
chr8 (153-193)||(40380278-40380318)
chr8 (157-193)||(45108691-45108727)
[»] chr2 (15 HSPs)
chr2 (152-189)||(18531597-18531634)
chr2 (156-193)||(22303203-22303240)
chr2 (154-194)||(4138207-4138247)
chr2 (151-194)||(4263886-4263928)
chr2 (154-193)||(29168723-29168762)
chr2 (153-199)||(8352832-8352878)
chr2 (155-193)||(18510674-18510712)
chr2 (154-199)||(1052524-1052569)
chr2 (148-193)||(4738606-4738651)
chr2 (156-193)||(15123970-15124007)
chr2 (156-193)||(31629604-31629641)
chr2 (154-194)||(694278-694318)
chr2 (150-186)||(18423802-18423838)
chr2 (154-194)||(29795445-29795485)
chr2 (157-193)||(40635714-40635750)
[»] scaffold0054 (1 HSPs)
scaffold0054 (154-194)||(31622-31662)
[»] scaffold0662 (1 HSPs)
scaffold0662 (155-193)||(1077-1115)
[»] scaffold0041 (1 HSPs)
scaffold0041 (159-193)||(34411-34445)
[»] scaffold0036 (1 HSPs)
scaffold0036 (151-193)||(17999-18041)
[»] scaffold0154 (1 HSPs)
scaffold0154 (156-193)||(19725-19762)
[»] scaffold0016 (1 HSPs)
scaffold0016 (152-193)||(204479-204520)
[»] scaffold0514 (1 HSPs)
scaffold0514 (153-193)||(1530-1570)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 6e-65; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 40950116 - 40949928
Alignment:
Q  11 atgaatgacaataatagacagcagataaagacctattataggtggttaatttgatgttgtaatggaatagtttgtttagnnnnnnn--ggtacaaaatcg 108  Q
    ||||||||||||||| ||| |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||         |||||||||| |    
T  40950116 atgaatgacaataattgactgcagataaagacctattataggt---taatttgatgttgtaatggaatagtttgtttagtttttttttggtacaaaatag 40950020  T
Q  109 tttgtttagttaatcgtgttgttttgtggaatccgtcaatataaaaagagaaatgatatttgtataactatt-ttttgacaactttcagaca 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40950019 tttgtttagttaatcgtgttgttttgtggaatccgtcaatataaaaagagaaatgatatttgtataactatttttttgacaactttcagaca 40949928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 40693600 - 40693556
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  40693600 agagaaatgatatttgtacaactattttttgacaacttttagaca 40693556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 37385308 - 37385267
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  37385308 aaaagataaatgatatttgtacaactattttttgacaacttt 37385267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 38547349 - 38547312
Alignment:
Q  157 agaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||| |||||||||||||||||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttc 38547312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 37392040 - 37392080
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  37392040 aaagagaaatgatatttgtacaaccattttttgacaacttt 37392080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 2323299 - 2323342
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||    
T  2323299 aaaaagagaaatgatatttgtacaacaattttatgacaactttc 2323342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 30391157 - 30391196
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  30391157 aagagaaatgatatttgtataactattttattacaacttt 30391196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 304
Target Start/End: Complemental strand, 40949862 - 40949823
Alignment:
Q  265 gaccaataagaagagggaaaaatgaggttgtcatagaagt 304  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  40949862 gaccaataagaagaggaaaaaaggaggttgtcatagaagt 40949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 45420121 - 45420082
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  45420121 agagaaatgatatttgaacaactattttttgacaactttc 45420082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 47905192 - 47905154
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaa 189  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  47905192 aaaaagagaaatgatatttgtacaaccattttttgacaa 47905154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 8742394 - 8742431
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  8742394 gagaaatgatatttgtacaactatgttttgacaacttt 8742431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 23848086 - 23848127
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||||||  ||||||| |||||||||    
T  23848086 aaagagaaatgatatttgtataatcattttttaacaactttc 23848127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 23910326 - 23910285
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||| |||||||||||||||| ||| ||||||||||||||||    
T  23910326 aaaatagaaatgatatttgtacaaccattttttgacaacttt 23910285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 26153646 - 26153683
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  26153646 gagaaatgatatttgtacaactattttatgacaacttt 26153683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 27704431 - 27704472
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||| ||||||||||  ||||||||    
T  27704431 aaaagagaaatgatatttgtacaactatttttgtacaacttt 27704472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 44216211 - 44216174
Alignment:
Q  157 agaaatgatatttgtataactattttt-tgacaacttt 193  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  44216211 agaaatgatatttgtataactatttttgtgacaacttt 44216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 23389667 - 23389627
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||||||||||| ||| ||||    
T  23389667 aaagagaaatgatatttgtacaactatttttttacaccttt 23389627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 26041315 - 26041359
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| ||| ||||| |||||||||||    
T  26041315 taaaaagagaaatgatattcgtacaaccattttatgacaactttc 26041359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 27331100 - 27331072
Alignment:
Q  154 aagagaaatgatatttgtataactatttt 182  Q
    |||||||||||||||||||||||||||||    
T  27331100 aagagaaatgatatttgtataactatttt 27331072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 28030884 - 28030924
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  28030884 aagagaaatggtatatgtataattattttttgacaactttc 28030924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 33845039 - 33845079
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| ||||| | ||||||||||||||    
T  33845039 aaagagaaatgatatttgaataaccactttttgacaacttt 33845079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 34304746 - 34304706
Alignment:
Q  159 aaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||| |||||||||||||||| ||| |||||    
T  34304746 aaatgatatttgtacaactattttttgacaatttttagaca 34304706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 48395245 - 48395285
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||| | ||||||||||||||    
T  48395245 aaagagaaatgatatttgtacaaccactttttgacaacttt 48395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 34428156 - 34428203
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  34428156 aaaagagaaatgatatttgtacaactattttttgacaacttttagaca 34428203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 29803222 - 29803262
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  29803222 aaagagaaatgatatttgtacaactattttttgacaacttt 29803262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 36572688 - 36572728
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  36572688 aaagagaaatgatatttgtataactattttgtgacaacttt 36572728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 14206395 - 14206438
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  14206395 aaaaagagaaatgatatttgtacaaccattttttgacaactttc 14206438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 19844384 - 19844343
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  19844384 aaaagagaaatgatatttgtacaactattttttgataacttt 19844343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 36548452 - 36548408
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||    
T  36548452 agagaaatgatatttgtataaccattttgtgacaactttctgaca 36548408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 32872971 - 32872932
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  32872971 aagagaaatgatatttgaacaactattttttgacaacttt 32872932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 3960245 - 3960203
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||| ||||||||||||  ||||||||||||||||    
T  3960245 aaaaagagaaatcatatttgtataatcattttttgacaacttt 3960203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 5996664 - 5996710
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||||| ||||||||||| |||| ||| |||||    
T  5996664 aaagagaaatgatatttgtacaactattttttaacaatttttagaca 5996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 25561082 - 25561048
Alignment:
Q  159 aaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||||||| ||||||||    
T  25561082 aaatgatatttgtataactattttttaacaacttt 25561048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 38919859 - 38919901
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||||| ||||||||||  |||||||||    
T  38919859 aaaagagaaatgatatttgtacaactatttttgtacaactttc 38919901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 42446363 - 42446325
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  42446363 agagaaatgatatttgaacaactattttttgacaacttt 42446325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 125088 - 125129
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||    
T  125088 aaaagagaaatgatatttgtacaactactttgtgacaacttt 125129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 372787 - 372742
Alignment:
Q  149 ataaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  372787 ataaaaagagaaatgatttttgtacaaccattttgtgacaactttc 372742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 2629818 - 2629855
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  2629818 gagaaatgatatttgtacaaccattttttgacaacttt 2629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 4434478 - 4434515
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaa 189  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  4434478 aaaagagaaatgatatttgtacaaccattttttgacaa 4434515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 11881064 - 11881015
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||| |||||||||||||||||| || |||||||| |||||||| |||||    
T  11881064 taaatagagaaatgatatttgtacaattattttttaacaacttttagaca 11881015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 31748336 - 31748373
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  31748336 gagaaatgatatttgtacaactatttttttacaacttt 31748373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 35165676 - 35165709
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttga 186  Q
    |||||||||||||||||||| |||||||||||||    
T  35165676 aaagagaaatgatatttgtacaactattttttga 35165709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 42643281 - 42643244
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  42643281 gagaaattatatttgaataactattttttgacaacttt 42643244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 14508229 - 14508193
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaact 191  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  14508229 agagaaatgatatttgtacaactattttgtgacaact 14508193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 20270565 - 20270605
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaact 191  Q
    |||||| ||||||||||||||| ||||||||| ||||||||    
T  20270565 aaaaagtgaaatgatatttgtaaaactattttatgacaact 20270605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 45529016 - 45528970
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||    
T  45529016 aaagagaaatgatatttgtacaactattttttgacaacttttagaca 45528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 50559288 - 50559246
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  50559288 aaaaagagaaatgatatttgtacaactattttttgacaacttt 50559246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 44855249 - 44855288
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  44855249 aagagaaatgatatttgtataactattttgtgacaacttt 44855288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 7867787 - 7867745
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  7867787 aaaaagagaaatgatatttgtacaactattttgtgacaacttt 7867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 3282534 - 3282570
Alignment:
Q  157 agaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3282534 agaaatgatatttgtataagtattttttgacaacttt 3282570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 32146060 - 32146020
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  32146060 aaagagaaatgatatttgaacaactattttttgacaacttt 32146020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 36869909 - 36869865
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||    
T  36869909 agagaaatgatatttgtacaaccattttttgacaacttttagaca 36869865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 44937217 - 44937257
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  44937217 aagagaaatgatatttgtacaacaattttttgacaactttc 44937257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 11056983 - 11056944
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  11056983 agagaaatgatatttgtacaacaattttttgacaactttc 11056944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 32575468 - 32575429
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaac 190  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  32575468 aaaaagagaaatgatatttgtataaccattttgtgacaac 32575429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 46952944 - 46952987
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||    
T  46952944 aaaaagagaaatgatatttgtacaaccattttttgataactttc 46952987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 50876423 - 50876384
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  50876423 agagaaatgatatttgtacaacaattttttgacaactttc 50876384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 36799397 - 36799435
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  36799397 agagaaatgatatttgtacaactattttttgataacttt 36799435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 41637352 - 41637314
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  41637352 agagaagtgatatttgtacaactattttttgacaacttt 41637314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 25188536 - 25188499
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  25188536 gagaaatgatatttgaacaactattttttgacaacttt 25188499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 34456786 - 34456827
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| ||||| | ||||||||||||||    
T  34456786 aaaagagaaatgatatttgaataaccactttttgacaacttt 34456827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 37988632 - 37988669
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  37988632 gagaaatgatatttatataactattttgtgacaacttt 37988669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 53392139 - 53392098
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||    
T  53392139 aaaagagaaataatatttgtacaacaattttttgacaacttt 53392098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 1902002 - 1901954
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||||||| ||| | ||| |||||||||| |||||    
T  1902002 aaaaagagaaatgatatttgtacaaccactttgtgacaacttttagaca 1901954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 1911448 - 1911400
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||||||| ||| | ||| |||||||||| |||||    
T  1911448 aaaaagagaaatgatatttgtacaaccactttgtgacaacttttagaca 1911400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 8254024 - 8254064
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  8254024 aaagagaaatgatatttgtacaaccattttgtgacaacttt 8254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 8868871 - 8868915
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||| ||   |||||||||||||||||||||    
T  8868871 agagaaatgatatttgtacaatctttttttgacaactttcagaca 8868915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 34627955 - 34627916
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  34627955 aaagagaaat-atatttgtacaactattttttgacaacttt 34627916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 37035611 - 37035659
Alignment:
Q  152 aaaagagaaatgatatttgtataacta-ttttttgacaactttcagaca 199  Q
    |||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  37035611 aaaagataaatgatatttgtataaccatttttttgacaacttttagaca 37035659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 40159912 - 40159872
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||||||||| | ||||||||    
T  40159912 aaagagaaatgatatttgtacaactattttctaacaacttt 40159872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 40499737 - 40499773
Alignment:
Q  157 agaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  40499737 agaaatgatatttgtataattattttatgacaacttt 40499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 180
Target Start/End: Complemental strand, 46323177 - 46323149
Alignment:
Q  152 aaaagagaaatgatatttgtataactatt 180  Q
    |||||||||||||||||||||||||||||    
T  46323177 aaaagagaaatgatatttgtataactatt 46323149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 49196693 - 49196733
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  49196693 aaagagaaatgatatttgtacaaccattttgtgacaacttt 49196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 54134849 - 54134889
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||| ||||||| ||||||||    
T  54134849 aaagagaaatgatatttgtacaaccatttttttacaacttt 54134889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 55344375 - 55344331
Alignment:
Q  148 tataaaaagagaaatgatatttgtataactattttttgacaactt 192  Q
    ||||||||||||||||||||||||| ||| ||||| ||| |||||    
T  55344375 tataaaaagagaaatgatatttgtacaaccattttgtgataactt 55344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 55361295 - 55361255
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| |||| ||||||||||||    
T  55361295 aagagaaatgatatttgtacaaccatttcttgacaactttc 55361255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 42853937 - 42853982
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||    
T  42853937 aagagaaatgatatttgtacaactattttttgacaacttttagaca 42853982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 44272884 - 44272844
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  44272884 aaagagaaatgatatttgtacaactattttttgacaacttt 44272844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 4511820 - 4511863
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  4511820 aaaaagagaaatgatatttgtataaccattttatgacaactttc 4511863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 33093177 - 33093137
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  33093177 aagagaaatgatatttgtacaactattttgtgacaactttc 33093137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 4974111 - 4974149
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttc 4974149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 18874995 - 18874950
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||    
T  18874995 aaagagaaatgatatttgtacaac-attttttgacaacttttagaca 18874950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 23667870 - 23667908
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaa 189  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  23667870 aaaaagagaaatgatattcgtataattattttttgacaa 23667908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 35017152 - 35017190
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  35017152 agagaaatgatatttgtacaactattttgtgacaacttt 35017190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 47014938 - 47014976
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  47014938 agagaaatgatatttgtacaactattttgtgacaacttt 47014976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 3316346 - 3316387
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||| |||| ||||| ||||||||||||||||    
T  3316346 aaaagagaaatgatttttgaataaccattttttgacaacttt 3316387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 9776403 - 9776370
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaa 189  Q
    ||||||||||||||||| ||||||||||||||||    
T  9776403 gagaaatgatatttgtacaactattttttgacaa 9776370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 23220335 - 23220372
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  23220335 gagaaatgatatttgtacaaccattttttgacaacttt 23220372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 33278671 - 33278712
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| | ||||||||| ||||||||||    
T  33278671 aaaagagaaatgatatttgaacaactattttgtgacaacttt 33278712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 33820411 - 33820370
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||| ||||||||| | ||||||||    
T  33820411 aaaagagaaatgatatttgtacaactattttctaacaacttt 33820370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 37393339 - 37393380
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  37393339 aaagagaaatgatatttgtataattattttgagacaactttc 37393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 41154048 - 41154085
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||| || ||||||||||||||||||||    
T  41154048 gagaaatgatatttatacaactattttttgacaacttt 41154085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 1368228 - 1368192
Alignment:
Q  157 agaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  1368228 agaaatgatatttatataactattttatgacaacttt 1368192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 4701533 - 4701561
Alignment:
Q  156 gagaaatgatatttgtataactatttttt 184  Q
    |||||||||||||||||||||||||||||    
T  4701533 gagaaatgatatttgtataactatttttt 4701561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 20760252 - 20760292
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  20760252 aaagagaaatgatatttgtacaattattttttaacaacttt 20760292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 20766643 - 20766683
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  20766643 aaagagaaatgatatttgtacaattattttttaacaacttt 20766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 31413848 - 31413808
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  31413848 aagagaaatgatatttgtacaactatttttgtacaactttc 31413808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 32079121 - 32079153
Alignment:
Q  150 taaaaagagaaatgatatttgtataactatttt 182  Q
    ||||||||||||||||||||||||||| |||||    
T  32079121 taaaaagagaaatgatatttgtataaccatttt 32079153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 32365737 - 32365689
Alignment:
Q  146 aatataaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||| | ||||||||||||||||| ||| ||||| |||||||||||    
T  32365737 aatataacatgagaaatgatatttgtacaaccattttgtgacaactttc 32365689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 32621628 - 32621676
Alignment:
Q  146 aatataaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||| |||||||||||||||| | ||| ||||| |||||||||||    
T  32621628 aatataaatagagaaatgatatttgcacaaccattttgtgacaactttc 32621676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 38864810 - 38864770
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| || |||||| ||||||||||    
T  38864810 aaagagaaatgatatttgtacaattattttgtgacaacttt 38864770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 41262691 - 41262651
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  41262691 aagagaaatgatatttgtacaattattttgtgacaactttc 41262651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 42815401 - 42815441
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||||||||| | ||||||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttt 42815441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 51255731 - 51255783
Alignment:
Q  141 ccgtcaatataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||| ||| | ||||||||||||||||| | ||| ||||||||||||||||    
T  51255731 ccgtcattattataagagaaatgatatttgaacaaccattttttgacaacttt 51255783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 53583210 - 53583162
Alignment:
Q  145 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||||||||| ||| | ||| | ||||||||    
T  53583210 caatataaaaagagaaatgatatttgtacaaccactttctcacaacttt 53583162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 27334847 - 27334895
Alignment:
Q  145 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  27334847 caatttaaaaagagaaatgatatttgtacaactattttgtgacaacttt 27334895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 27395587 - 27395635
Alignment:
Q  145 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  27395587 caatttaaaaagagaaatgatatttgtacaactattttgtgacaacttt 27395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 32644617 - 32644661
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  32644617 taaaatgagaaatgatatttgtacaactattttttgacaactttc 32644661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 12044330 - 12044375
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||| || |||||||||||||||||||| |||||    
T  12044330 aagagaaatgatatttatacaactattttttgacaacttttagaca 12044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 12280440 - 12280477
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  12280440 gagaaatgatatttgtataactattttctgacaacttt 12280477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 9083135 - 9083099
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaa 189  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9083135 aaagagaaatgatatttgtataactattttttaacaa 9083099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 17551461 - 17551413
Alignment:
Q  145 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||| |||||||||||||||||||| | ||| ||||||||||||||||    
T  17551461 caataaaaaaagagaaatgatatttgaacaaccattttttgacaacttt 17551413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 30767340 - 30767300
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  30767340 aaagagaaatgatatttgtttaactattttgtgacaacttt 30767300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 32729883 - 32729926
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||    
T  32729883 taaaaagagaaatgatatttgtacaaccattttctgacaacttt 32729926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 12441534 - 12441576
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||    
T  12441534 aaaagagaaatgatatttgtacaactactttgtgacaactttc 12441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 17902764 - 17902726
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  17902764 agagaaatgatatttgtataactaatttatgacaacttt 17902726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 32644724 - 32644762
Alignment:
Q  266 accaataagaagagggaaaaatgaggttgtcatagaagt 304  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  32644724 accaatgagaagagagaaaaatgaggttgtcatagaagt 32644762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 958733 - 958696
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  958733 gagaaatgatatttgtataattattttttaacaacttt 958696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 9189017 - 9188972
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  9189017 aagagaaatgatatttgtacaaccattttttaacaacttttagaca 9188972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 12280706 - 12280743
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaa 189  Q
    |||||||||||||||||| || ||||||||||||||||    
T  12280706 aaaagagaaatgatatttatacaactattttttgacaa 12280743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 13658326 - 13658367
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| | |||| ||||||||||||||||    
T  13658326 aaaagagaaatgatatttttctaacaattttttgacaacttt 13658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 2060696 - 2060656
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| ||||| ||||| ||||||||||    
T  2060696 aaagagaaatgatatttgaataaccattttatgacaacttt 2060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 3180066 - 3180026
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||  ||||||||||||||||    
T  3180066 aaagagaaatgatatttgtacaatcattttttgacaacttt 3180026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 3339573 - 3339533
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  3339573 aaagagaaatgatatttgtacaaccattttgtgacaacttt 3339533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 11743058 - 11743010
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||| ||||||||| ||||||||||||| || ||| |||||    
T  11743058 aaaaagagaaataatatttgtacaactattttttgataatttttagaca 11743010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 18610767 - 18610810
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  18610767 taaaaagagaaatgatatttgtacaactattttgtgacaacttt 18610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 35883680 - 35883641
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  35883680 aagagaaatgatatttgtacaattattttttgacaacttt 35883641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 37843505 - 37843466
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  37843505 aagagaaatgatatttgtacaactactttttgacaacttt 37843466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 48872371 - 48872422
Alignment:
Q  148 tataaaaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    ||||||||||||||||||||||||| ||| | ||| |||||||||| |||||    
T  48872371 tataaaaagagaaatgatatttgtacaaccactttatgacaacttttagaca 48872422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 3697215 - 3697177
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  3697215 agagaaatgatatttgtacaactatttgttgacaacttt 3697177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 43612144 - 43612102
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||    
T  43612144 aaaagagaaatgatatttgtacaaccattttatgacaactttc 43612102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 48872088 - 48872050
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttc 48872050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 16987445 - 16987490
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    ||||||||||||||||||| || |||||||| |||||||| |||||    
T  16987445 aagagaaatgatatttgtacaattattttttaacaacttttagaca 16987490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 25989061 - 25989012
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||| |||||||||||||||||| ||| ||||||| |||||||| |||||    
T  25989061 taaatagagaaatgatatttgtacaaccattttttaacaacttttagaca 25989012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 40596117 - 40596076
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||| ||| ||||| |||||||||||    
T  40596117 aaagagaaatgatatttgtacaaccattttgtgacaactttc 40596076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 42256456 - 42256497
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||    
T  42256456 aaaagagaaatgatatttgtacaaccattttgtgacaacttt 42256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 7078574 - 7078534
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  7078574 aaagagaaatgatatttgtacatctattttgtgacaacttt 7078534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 9011642 - 9011682
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  9011642 aaagagaaatgatatttgtacaaccattttgtgacaacttt 9011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 9897632 - 9897596
Alignment:
Q  157 agaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  9897632 agaaatgatatttgtagaaccattttttgacaacttt 9897596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 27742610 - 27742654
Alignment:
Q  149 ataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||| | ||| | ||||||||||||||    
T  27742610 ataaaaagagaaatgatatttgaacaaccactttttgacaacttt 27742654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 45272222 - 45272182
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| | |||||||||||||||    
T  45272222 aagagaaatgatatttgtacaaccactttttgacaactttc 45272182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 48983742 - 48983702
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  48983742 aaagagaaatgatatttgaacaaccattttttgacaacttt 48983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 49805009 - 49804969
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||| |||| |||||||||||||| ||||||||||||||    
T  49805009 aaagaggaatggtatttgtataactactttttgacaacttt 49804969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 13885770 - 13885811
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactt 192  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  13885770 aaaaagagaaatgatatttgtataaccaatttttgacaactt 13885811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 36497659 - 36497704
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||    
T  36497659 aagagaaatgatatttgtacaactattttgtgacaacttttagaca 36497704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 41955925 - 41955966
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  41955925 aaaagagaaatgatatttgtataaccattttttaacaacttt 41955966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 14233706 - 14233666
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  14233706 aagagaaatgatatttgtacaactatttttttacaactttc 14233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 37392190 - 37392150
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  37392190 aagagaaatgatatttgtacaaccattttttgacaactttc 37392150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 13592764 - 13592803
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  13592764 aagagaaatgatatttgtacacctattttttgacaacttt 13592803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 30170806 - 30170763
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||    
T  30170806 taaaaagagaaatgatatttgtacaaccactttttgacaacttt 30170763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 40413414 - 40413371
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||||| || |||||| |||||||||||    
T  40413414 aaaaagagaaatgatatttgtacaattattttgtgacaactttc 40413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 5772047 - 5772006
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| | ||| ||||||||||||||||    
T  5772047 aaaagagaaatgatatttgaacaaccattttttgacaacttt 5772006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 7678728 - 7678769
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||| ||| | ||||||||||||||    
T  7678728 aaaagagaaatgatatttgtacaaccactttttgacaacttt 7678769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 23265414 - 23265377
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  23265414 gagaaatgatatttgtataactatttttatacaacttt 23265377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 45101388 - 45101433
Alignment:
Q  148 tataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||||| ||| | ||| ||||||||||    
T  45101388 tataaaaagagaaatgatatttgtacaaccactttgtgacaacttt 45101433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 37562213 - 37562169
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||| ||||||| | |||||||||| |||||    
T  37562213 agagaaatgatatttgtacaactattatgtgacaacttttagaca 37562169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 40380278 - 40380318
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  40380278 aaagagaaatgatatttgtacatctattttatgacaacttt 40380318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 45108727 - 45108691
Alignment:
Q  157 agaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||| | ||||||||||||||||||    
T  45108727 agaaatgatatttgtacatctattttttgacaacttt 45108691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 18531597 - 18531634
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaa 189  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  18531597 aaaagagaaatgatatttgtacaactattttttgacaa 18531634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 22303203 - 22303240
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  22303203 gagaaatgatatttgtacaactattttttgacaacttt 22303240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 4138247 - 4138207
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  4138247 aagagaaatgatatttgtataactattttctaacaactttc 4138207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 4263928 - 4263886
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaactttc 194  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  4263928 aaaaagagaaatgatatttgtacaac-attttttgacaactttc 4263886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 29168723 - 29168762
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  29168723 aagagaaatgatatttgtacaaccattttttgacaacttt 29168762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 8352832 - 8352878
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    |||||||||||||||||||| ||||||||||| | |||||| |||||    
T  8352832 aaagagaaatgatatttgtacaactattttttaataacttttagaca 8352878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 18510674 - 18510712
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  18510674 agagaaatgatatttgaacaactattttttgacaacttt 18510712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 1052569 - 1052524
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttcagaca 199  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  1052569 aagagaaatgatatttgtacaaccattttttaacaacttttagaca 1052524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 4738651 - 4738606
Alignment:
Q  148 tataaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||||||| ||| | ||| ||||||||||    
T  4738651 tataaaaagagaaatgatatttgtacaaccactttgtgacaacttt 4738606  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 15124007 - 15123970
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  15124007 gagaaatgatatttgtacaaccattttttgacaacttt 15123970  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 31629604 - 31629641
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  31629604 gagaaatgatatttgtacaactactttttgacaacttt 31629641  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 694278 - 694318
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| |||||||||||| ||||    
T  694278 aagagaaatgatatttgtacaaccattttttgacaattttc 694318  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 18423838 - 18423802
Alignment:
Q  150 taaaaagagaaatgatatttgtataactattttttga 186  Q
    ||||||||||||||||||||||| | |||||||||||    
T  18423838 taaaaagagaaatgatatttgtacatctattttttga 18423802  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 29795445 - 29795485
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| ||||| |||||||||||    
T  29795445 aagagaaatgatatttgtacaaccattttgtgacaactttc 29795485  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 40635714 - 40635750
Alignment:
Q  157 agaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  40635714 agaaatgatatttgaataactattttttaacaacttt 40635750  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 31662 - 31622
Alignment:
Q  154 aagagaaatgatatttgtataactattttttgacaactttc 194  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  31662 aagagaaatgatatttgtacaaccattttttgacaactttc 31622  T

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Target: scaffold0662 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 1077 - 1115
Alignment:
Q  155 agagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  1077 agagaaatgatatttgtacaactattttgtgacaacttt 1115  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 34411 - 34445
Alignment:
Q  159 aaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||| ||||||||||||||||||||    
T  34411 aaatgatatttgtacaactattttttgacaacttt 34445  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 17999 - 18041
Alignment:
Q  151 aaaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||| | || |||||||||||||||||    
T  17999 aaaaagagaaatgatatttggacaattattttttgacaacttt 18041  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 19762 - 19725
Alignment:
Q  156 gagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  19762 gagaaatgatatttgtacaactattttgtgacaacttt 19725  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 204520 - 204479
Alignment:
Q  152 aaaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  204520 aaaagagaaatgatatttgtacatctattttctgacaacttt 204479  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 1570 - 1530
Alignment:
Q  153 aaagagaaatgatatttgtataactattttttgacaacttt 193  Q
    |||||||||||||||||||||||| | ||| ||||||||||    
T  1570 aaagagaaatgatatttgtataaccaatttgtgacaacttt 1530  T

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