View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16887_low_7 (Length: 247)
Name: NF16887_low_7
Description: NF16887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16887_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 8357763 - 8357983
Alignment:
| Q |
18 |
atttagattgatatctacggtagtgaagggtgacgtgtgaaagactcaaacatatttaattaactttccatagttgagctaaaaaacaaattaaatacag |
117 |
Q |
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| T |
8357763 |
atttagattgatatctacggtagtgaagggtgacgtgtgaaagactcaa-catatttaattaactttccatagttgagctaaaaaacaaattaaatacag |
8357861 |
T |
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| Q |
118 |
tctagattgctgttcacgggtccataaataggaggacattaataataaatccacaattattgtggctcctagaaagaattatgttcagtttgtattcaaa |
217 |
Q |
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| T |
8357862 |
tctagattgctgttcacgggtccataaataggaggacattaataataaatccacaattattgtggctcctagaaagaactatgttcagtttgtcttcaaa |
8357961 |
T |
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| Q |
218 |
acctctaaagtagtttcttctc |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
8357962 |
acctctaaagtagtttcttctc |
8357983 |
T |
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