View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16890_high_19 (Length: 301)
Name: NF16890_high_19
Description: NF16890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16890_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 45615885 - 45616122
Alignment:
| Q |
13 |
agaacctgtggctactctttatttatgccgctctggaatttgaactaatagaa--gattataaaccataagtagggtccatctaagaatatagctaggtt |
110 |
Q |
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| T |
45615885 |
agaacctgtggctactctttatttatgccgctctggaatttggactaatagcacagattataagccataagtagggtccatctaagaatatagctaggtt |
45615984 |
T |
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| Q |
111 |
caaagtaggataccagcttgcccttttagaaatagaactttggaaaagaaatcatta-agaaaatgggtggttaagacatcagtcaaaaataaaata-tt |
208 |
Q |
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| T |
45615985 |
caaagtaggataccagcttgcccttttagaaatagaatttttgaaaagaaatcattagagaaaatggttggttaagtcatcagtcaaaaataagatactt |
45616084 |
T |
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| Q |
209 |
aaatcatagactaaacaataagagtaattagtaggcac |
246 |
Q |
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||||||||||||||||| |||||||||||||||||||| |
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| T |
45616085 |
aaatcatagactaaacattaagagtaattagtaggcac |
45616122 |
T |
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