View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16890_low_1 (Length: 288)
Name: NF16890_low_1
Description: NF16890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16890_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 25777590 - 25777328
Alignment:
| Q |
7 |
gagaaagttgatgcaaattaaagagtgaaaaccagagcatctatattgtaattttgacgaagaaccttgtcaatagaatcccaaaggttcacatcacgct |
106 |
Q |
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| T |
25777590 |
gagaaagttgatgcaaa----agagtgaaaaccagagcatctatattgtaattttgatgaagaaccttgtcaattgaatcccaaaggttcacatcacgct |
25777495 |
T |
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| Q |
107 |
aaacttaagtaacacttgggcactctatcaaaacatggatgatgccttcataattacttccacaaagatcacaatcaagtggccaagacactcctatatt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25777494 |
aaacttaagtaacacttgggcactctatcaaaacatggatgatgccttcataattacttccacaaagatcacaatcaagtggccaagacactcctatatt |
25777395 |
T |
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| Q |
207 |
attactaaggcgtgctcgagttgggaaccacccatggcacaccctatgaacataattcttgacctga |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25777394 |
attactaaggcgtgctcgagttgggaaccacccatggcacaccctatgaacataattcttgacctga |
25777328 |
T |
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