View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16892_high_11 (Length: 318)

Name: NF16892_high_11
Description: NF16892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16892_high_11
NF16892_high_11
[»] chr7 (42 HSPs)
chr7 (13-156)||(539886-540029)
chr7 (13-156)||(12565947-12566090)
chr7 (13-156)||(14222842-14222985)
chr7 (13-156)||(13355183-13355326)
chr7 (13-156)||(5396072-5396216)
chr7 (13-156)||(10439465-10439608)
chr7 (13-156)||(16326906-16327049)
chr7 (14-156)||(23514013-23514155)
chr7 (15-156)||(4311670-4311811)
chr7 (15-156)||(9581848-9581988)
chr7 (13-156)||(8783228-8783371)
chr7 (222-301)||(539733-539813)
chr7 (222-301)||(16326736-16326816)
chr7 (225-301)||(9582077-9582154)
chr7 (225-301)||(13673019-13673096)
chr7 (225-301)||(16466590-16466667)
chr7 (225-301)||(27290524-27290601)
chr7 (222-301)||(10432716-10432796)
chr7 (222-301)||(14222672-14222752)
chr7 (222-301)||(23514228-23514308)
chr7 (225-301)||(824809-824886)
chr7 (225-301)||(5396299-5396376)
chr7 (225-301)||(8717028-8717105)
chr7 (225-301)||(14550260-14550337)
chr7 (225-301)||(15064955-15065032)
chr7 (225-301)||(15207536-15207613)
chr7 (225-297)||(15917737-15917810)
chr7 (225-301)||(16150458-16150535)
chr7 (225-301)||(16531269-16531346)
chr7 (225-301)||(16634316-16634393)
chr7 (225-301)||(18594241-18594318)
chr7 (225-301)||(18617366-18617443)
chr7 (223-301)||(12566181-12566260)
chr7 (226-301)||(11927883-11927960)
chr7 (225-301)||(13657085-13657162)
chr7 (225-301)||(18286787-18286864)
chr7 (225-301)||(13355401-13355479)
chr7 (225-301)||(48802824-48802901)
chr7 (225-301)||(20107457-20107534)
chr7 (225-291)||(4311905-4311972)
chr7 (257-301)||(4792393-4792437)
chr7 (264-301)||(8782968-8783005)
[»] chr5 (35 HSPs)
chr5 (13-156)||(23601767-23601910)
chr5 (13-156)||(24218773-24218916)
chr5 (13-156)||(18487190-18487333)
chr5 (13-156)||(24939474-24939617)
chr5 (13-156)||(22827886-22828029)
chr5 (13-156)||(20445975-20446118)
chr5 (13-156)||(21282038-21282180)
chr5 (15-156)||(23711832-23711972)
chr5 (222-301)||(20445805-20445885)
chr5 (222-301)||(21281886-21281966)
chr5 (222-301)||(23601618-23601698)
chr5 (222-301)||(23711651-23711731)
chr5 (225-301)||(15734697-15734774)
chr5 (225-301)||(20596804-20596881)
chr5 (225-301)||(20609381-20609458)
chr5 (225-301)||(20791690-20791767)
chr5 (225-301)||(23747213-23747290)
chr5 (225-301)||(24954149-24954226)
chr5 (225-301)||(25007758-25007835)
chr5 (225-301)||(26846836-26846913)
chr5 (225-301)||(30760596-30760673)
chr5 (222-301)||(22854739-22854819)
chr5 (222-301)||(24218994-24219074)
chr5 (222-301)||(24939689-24939769)
chr5 (225-301)||(18072063-18072140)
chr5 (225-301)||(20621325-20621402)
chr5 (225-301)||(22318465-22318542)
chr5 (225-301)||(25117118-25117195)
chr5 (225-301)||(25176209-25176286)
chr5 (225-301)||(20603090-20603168)
chr5 (222-301)||(18487038-18487118)
chr5 (33-156)||(25007923-25008046)
chr5 (33-156)||(22318624-22318747)
chr5 (222-256)||(20574610-20574644)
chr5 (264-301)||(22947643-22947680)
[»] chr4 (25 HSPs)
chr4 (13-156)||(11497740-11497883)
chr4 (13-156)||(10629691-10629834)
chr4 (14-156)||(18290965-18291107)
chr4 (13-156)||(15348970-15349114)
chr4 (13-156)||(14686899-14687042)
chr4 (13-156)||(45235358-45235501)
chr4 (15-156)||(42710905-42711046)
chr4 (13-93)||(45240047-45240127)
chr4 (222-301)||(11497588-11497668)
chr4 (225-301)||(13822077-13822154)
chr4 (225-301)||(15261063-15261140)
chr4 (225-301)||(22110122-22110199)
chr4 (225-301)||(42710707-42710784)
chr4 (222-301)||(10629906-10629986)
chr4 (222-301)||(14686742-14686822)
chr4 (223-301)||(18082438-18082517)
chr4 (222-301)||(45235202-45235281)
chr4 (225-301)||(3353812-3353889)
chr4 (222-301)||(18291176-18291256)
chr4 (222-301)||(10649572-10649652)
chr4 (222-301)||(15348788-15348868)
chr4 (225-301)||(15253511-15253588)
chr4 (225-301)||(15864672-15864749)
chr4 (222-299)||(17485871-17485949)
chr4 (256-301)||(38425938-38425983)
[»] chr1 (13 HSPs)
chr1 (13-156)||(27045811-27045954)
chr1 (222-301)||(27046035-27046115)
chr1 (225-301)||(17095577-17095654)
chr1 (225-301)||(21799638-21799715)
chr1 (81-156)||(21785591-21785666)
chr1 (222-289)||(20071902-20071970)
chr1 (225-291)||(3989259-3989326)
chr1 (222-301)||(21785429-21785510)
chr1 (225-301)||(8652186-8652263)
chr1 (225-301)||(20236631-20236708)
chr1 (225-301)||(8948529-8948604)
chr1 (35-156)||(19876814-19876935)
chr1 (13-68)||(21785658-21785713)
[»] scaffold0220 (2 HSPs)
scaffold0220 (13-156)||(9452-9595)
scaffold0220 (222-271)||(9322-9371)
[»] scaffold0026 (3 HSPs)
scaffold0026 (13-156)||(17301-17444)
scaffold0026 (222-301)||(10320-10399)
scaffold0026 (222-301)||(17519-17598)
[»] chr8 (30 HSPs)
chr8 (13-156)||(17619685-17619828)
chr8 (13-156)||(20040196-20040339)
chr8 (13-156)||(20001242-20001385)
chr8 (21-156)||(21854903-21855038)
chr8 (222-301)||(20001481-20001561)
chr8 (222-301)||(20711626-20711706)
chr8 (222-301)||(21854754-21854834)
chr8 (225-301)||(8313630-8313707)
chr8 (225-301)||(8323826-8323903)
chr8 (225-301)||(16419585-16419662)
chr8 (225-301)||(19766714-19766791)
chr8 (225-301)||(21099765-21099842)
chr8 (225-301)||(21381255-21381332)
chr8 (225-301)||(21955238-21955315)
chr8 (225-301)||(22101578-22101655)
chr8 (225-301)||(23910603-23910680)
chr8 (225-301)||(29333780-29333857)
chr8 (222-301)||(19365190-19365270)
chr8 (222-301)||(20039963-20040043)
chr8 (225-301)||(22034512-22034589)
chr8 (225-301)||(22100610-22100687)
chr8 (225-301)||(22369128-22369205)
chr8 (222-297)||(17619901-17619977)
chr8 (225-301)||(21942412-21942488)
chr8 (225-301)||(11347910-11347988)
chr8 (256-301)||(21830232-21830277)
chr8 (33-156)||(22034670-22034793)
chr8 (225-260)||(21826596-21826631)
chr8 (98-156)||(16419740-16419798)
chr8 (38-139)||(21826341-21826442)
[»] chr6 (27 HSPs)
chr6 (13-156)||(18188700-18188843)
chr6 (13-156)||(18852961-18853104)
chr6 (13-156)||(22062640-22062781)
chr6 (13-156)||(17818460-17818603)
chr6 (225-301)||(15698719-15698796)
chr6 (225-301)||(20169407-20169484)
chr6 (225-301)||(21561403-21561480)
chr6 (225-301)||(22166524-22166601)
chr6 (225-301)||(22242976-22243053)
chr6 (222-301)||(18853176-18853256)
chr6 (227-301)||(29594867-29594942)
chr6 (225-301)||(11218790-11218867)
chr6 (225-301)||(18011030-18011107)
chr6 (225-301)||(18447381-18447458)
chr6 (225-301)||(20017203-20017280)
chr6 (222-301)||(22062479-22062559)
chr6 (222-301)||(18188547-18188628)
chr6 (13-94)||(19586777-19586857)
chr6 (225-301)||(25624931-25625008)
chr6 (222-301)||(25632319-25632399)
chr6 (13-155)||(23518879-23519021)
chr6 (225-301)||(22768093-22768170)
chr6 (225-301)||(24856219-24856296)
chr6 (222-301)||(15850956-15851036)
chr6 (222-297)||(19967010-19967086)
chr6 (222-260)||(20079668-20079706)
chr6 (100-148)||(23344507-23344555)
[»] chr3 (50 HSPs)
chr3 (13-156)||(6813806-6813949)
chr3 (13-156)||(9362084-9362227)
chr3 (13-156)||(13089934-13090077)
chr3 (13-156)||(20559973-20560116)
chr3 (13-156)||(20562281-20562424)
chr3 (13-156)||(20564589-20564732)
chr3 (13-156)||(13096654-13096794)
chr3 (20-156)||(12777631-12777767)
chr3 (13-136)||(3246663-3246786)
chr3 (222-301)||(6814030-6814110)
chr3 (222-301)||(13096859-13096939)
chr3 (223-301)||(12777494-12777573)
chr3 (225-301)||(3340179-3340256)
chr3 (225-301)||(4369853-4369930)
chr3 (225-301)||(7599518-7599595)
chr3 (225-301)||(10146174-10146251)
chr3 (225-301)||(10161151-10161228)
chr3 (225-301)||(10603446-10603523)
chr3 (225-301)||(13188392-13188469)
chr3 (225-301)||(13505481-13505558)
chr3 (225-301)||(15557920-15557997)
chr3 (225-301)||(15629931-15630008)
chr3 (225-301)||(15945794-15945871)
chr3 (225-301)||(22165286-22165363)
chr3 (222-301)||(9361943-9362023)
chr3 (222-301)||(11946574-11946654)
chr3 (222-301)||(13089782-13089862)
chr3 (222-301)||(20560188-20560268)
chr3 (222-301)||(20562496-20562576)
chr3 (222-301)||(20564804-20564884)
chr3 (225-298)||(12194467-12194541)
chr3 (225-301)||(11865959-11866036)
chr3 (225-301)||(13137144-13137221)
chr3 (225-301)||(15644252-15644329)
chr3 (225-301)||(16449709-16449786)
chr3 (225-301)||(16654893-16654970)
chr3 (222-301)||(10547845-10547925)
chr3 (225-298)||(12188053-12188127)
chr3 (225-301)||(13694064-13694142)
chr3 (225-301)||(13689819-13689896)
chr3 (225-301)||(13196413-13196491)
chr3 (225-301)||(16374455-16374531)
chr3 (225-300)||(3246480-3246555)
chr3 (225-301)||(13064132-13064208)
chr3 (225-301)||(17386927-17387003)
chr3 (225-287)||(1991889-1991950)
chr3 (256-299)||(12161168-12161211)
chr3 (243-301)||(37941556-37941619)
chr3 (47-128)||(16654682-16654763)
chr3 (98-156)||(13196569-13196627)
[»] scaffold0012 (4 HSPs)
scaffold0012 (13-156)||(8399-8542)
scaffold0012 (13-156)||(12571-12714)
scaffold0012 (223-301)||(8241-8320)
scaffold0012 (223-301)||(12413-12492)
[»] scaffold0566 (2 HSPs)
scaffold0566 (13-155)||(1551-1693)
scaffold0566 (222-301)||(1777-1857)
[»] scaffold0035 (2 HSPs)
scaffold0035 (13-156)||(51673-51817)
scaffold0035 (225-301)||(51467-51544)
[»] scaffold0384 (1 HSPs)
scaffold0384 (225-301)||(9748-9824)
[»] scaffold0404 (1 HSPs)
scaffold0404 (225-301)||(201-278)
[»] scaffold0156 (1 HSPs)
scaffold0156 (225-301)||(6-83)
[»] scaffold0078 (1 HSPs)
scaffold0078 (225-301)||(29674-29751)
[»] scaffold0032 (2 HSPs)
scaffold0032 (225-301)||(90438-90515)
scaffold0032 (20-149)||(90222-90351)
[»] scaffold0029 (1 HSPs)
scaffold0029 (225-301)||(122533-122610)
[»] scaffold0004 (3 HSPs)
scaffold0004 (225-301)||(18937-19014)
scaffold0004 (225-301)||(355470-355547)
scaffold0004 (225-301)||(252843-252920)
[»] chr2 (23 HSPs)
chr2 (225-301)||(116707-116784)
chr2 (225-301)||(16774813-16774890)
chr2 (225-301)||(17589570-17589647)
chr2 (225-301)||(22045635-22045712)
chr2 (225-301)||(23160341-23160418)
chr2 (225-301)||(23571598-23571675)
chr2 (225-301)||(25356674-25356751)
chr2 (225-301)||(27626756-27626833)
chr2 (225-301)||(27630681-27630758)
chr2 (225-301)||(27769770-27769847)
chr2 (225-301)||(24170498-24170574)
chr2 (225-301)||(22664249-22664326)
chr2 (225-301)||(23647100-23647177)
chr2 (225-301)||(25145739-25145816)
chr2 (222-301)||(24517296-24517376)
chr2 (225-301)||(24820996-24821074)
chr2 (225-301)||(12589-12666)
chr2 (225-301)||(24796259-24796336)
chr2 (225-301)||(23630553-23630630)
chr2 (225-301)||(26192592-26192669)
chr2 (15-148)||(25339250-25339383)
chr2 (13-60)||(24501257-24501304)
chr2 (21-145)||(25368772-25368896)
[»] scaffold0206 (2 HSPs)
scaffold0206 (222-301)||(17519-17599)
scaffold0206 (93-156)||(17752-17815)
[»] scaffold0485 (1 HSPs)
scaffold0485 (13-156)||(11044-11187)
[»] scaffold0116 (1 HSPs)
scaffold0116 (225-301)||(38697-38775)
[»] scaffold0974 (2 HSPs)
scaffold0974 (225-301)||(276-353)
scaffold0974 (33-155)||(75-197)
[»] scaffold0473 (1 HSPs)
scaffold0473 (225-301)||(13200-13277)
[»] scaffold0374 (1 HSPs)
scaffold0374 (225-301)||(9355-9432)
[»] scaffold0346 (2 HSPs)
scaffold0346 (225-301)||(4581-4658)
scaffold0346 (46-156)||(4730-4841)
[»] scaffold0258 (1 HSPs)
scaffold0258 (225-301)||(23113-23190)
[»] scaffold0117 (1 HSPs)
scaffold0117 (225-301)||(46178-46255)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-86)||(29705-29778)
[»] scaffold0051 (1 HSPs)
scaffold0051 (225-301)||(25352-25429)
[»] scaffold0022 (1 HSPs)
scaffold0022 (225-301)||(24750-24827)
[»] scaffold0020 (4 HSPs)
scaffold0020 (225-301)||(115810-115887)
scaffold0020 (225-301)||(120114-120191)
scaffold0020 (33-156)||(115597-115720)
scaffold0020 (33-156)||(119901-120024)
[»] scaffold0679 (1 HSPs)
scaffold0679 (226-301)||(7177-7252)
[»] scaffold0031 (1 HSPs)
scaffold0031 (37-120)||(22215-22298)
[»] scaffold0018 (1 HSPs)
scaffold0018 (225-301)||(19162-19240)
[»] scaffold0577 (1 HSPs)
scaffold0577 (225-301)||(5768-5845)
[»] scaffold0322 (1 HSPs)
scaffold0322 (225-301)||(7911-7988)
[»] scaffold0230 (1 HSPs)
scaffold0230 (225-301)||(12650-12727)
[»] scaffold0216 (1 HSPs)
scaffold0216 (225-301)||(10584-10661)
[»] scaffold0146 (1 HSPs)
scaffold0146 (225-301)||(22043-22120)
[»] scaffold0127 (1 HSPs)
scaffold0127 (225-297)||(167-240)
[»] scaffold0037 (2 HSPs)
scaffold0037 (225-301)||(44613-44690)
scaffold0037 (225-301)||(52002-52079)
[»] scaffold0162 (1 HSPs)
scaffold0162 (225-300)||(36080-36156)
[»] scaffold0215 (1 HSPs)
scaffold0215 (225-301)||(7942-8019)
[»] scaffold2037 (1 HSPs)
scaffold2037 (222-284)||(1-64)
[»] scaffold0402 (1 HSPs)
scaffold0402 (32-149)||(6836-6953)
[»] scaffold0367 (1 HSPs)
scaffold0367 (222-288)||(11758-11823)
[»] scaffold0375 (2 HSPs)
scaffold0375 (225-290)||(11699-11765)
scaffold0375 (32-145)||(11479-11592)
[»] scaffold0011 (1 HSPs)
scaffold0011 (225-290)||(161009-161075)
[»] scaffold0328 (1 HSPs)
scaffold0328 (228-301)||(1212-1285)
[»] scaffold0034 (1 HSPs)
scaffold0034 (261-301)||(59596-59636)
[»] scaffold1620 (1 HSPs)
scaffold1620 (225-260)||(2-37)


Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 540029 - 539886
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  540029 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 539930  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  539929 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 539886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 12565947 - 12566090
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12565947 agacaaagtgttgaaacgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 12566046  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  12566047 ttcacctccaagttctaccttatggacttcaataaaattgtgag 12566090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 14222985 - 14222842
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  14222985 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaatgaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 14222886  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  14222885 ttcacctccaaggtccaccttatggactacaataaaattgtgag 14222842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 13355183 - 13355326
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |    
T  13355183 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcacttaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 13355282  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13355283 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 13355326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 5396072 - 5396216
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaa-taaatgaataaaacaatcaaatgttccgatacatgatgcaacat 111  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  5396072 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacac 5396171  T
Q  112 cttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
     |||||||||||||||||||||||| |||||||||||||||||||    
T  5396172 attcacctccaaggtccaccttatgaacttcaataaaattgtgag 5396216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 10439608 - 10439465
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |    
T  10439608 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaaataaatgcataaaacaatcaaatgttctgatacatgatgcaacacc 10439509  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  10439508 ttcacctccaaggtctaccttttggacttcaataaaattgtgag 10439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 16327049 - 16326906
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| |    
T  16327049 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggagcaatcaaatgaatgaataaaacaatccaatgttccgatacatgatgcaacacc 16326950  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  16326949 ttcacctccaaggtccaccttatggactacaataaaattctgag 16326906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 23514013 - 23514155
Alignment:
Q  14 gacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatct 113  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||    
T  23514013 gacaaggtgttgaaatgatcgggctaagaaatgatgtcctaaggggcaatcaaataaatgaataacacaatccaatgttccgatacatgatgcaacacct 23514112  T
Q  114 tcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||| |||||||||||| | ||||||||||||||||||||    
T  23514113 tcacctctaaggtccaccttctagacttcaataaaattgtgag 23514155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 4311670 - 4311811
Alignment:
Q  15 acaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatctt 114  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| |||    
T  4311670 acaaggtgttgaaatggtcgggataagaaacgatgtcctaaggggcaatcgaataaatgaataaaacaatcaaatgctccgaaacatgatgcaacacctt 4311769  T
Q  115 cacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||| ||| || ||||||||||||||||    
T  4311770 cacctccaaggtccacctaatgaacctcaataaaattgtgag 4311811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 9581848 - 9581988
Alignment:
Q  15 acaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatctt 114  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||    
T  9581848 acaaggtgttgaaatggtcgggataagaaacgatgtcctaaggggcaatcaaataaatgaataacacaatcaaatgttccgat-catgatgcaacacctt 9581946  T
Q  115 cacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||| |||| ||| |||||||||||||    
T  9581947 cacctccaaggtccaccttgtggatttccataaaattgtgag 9581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 8783371 - 8783228
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||| ||  | ||||||||| ||| |    
T  8783371 agacaaagtgttgaaatggtcgggctaagaaacgatgtcctaaggggcaattgaataaatgaagaaaataatcaaatgctctaaaacatgatgctacacc 8783272  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  8783271 ttcacctccaaggtccaccttatggacctcaataaaattgtgag 8783228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 539813 - 539733
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  539813 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 16326816 - 16326736
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16326816 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 16326736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 9582077 - 9582154
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  9582077 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 9582154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13673019 - 13673096
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  13673019 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13673096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 16466667 - 16466590
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16466667 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 16466590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 27290524 - 27290601
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27290524 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 27290601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 10432796 - 10432716
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  10432796 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 10432716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 14222752 - 14222672
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  14222752 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtatctttagtcgtagtgtttccaaactcc 14222672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 23514228 - 23514308
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  23514228 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcattagtcgtagtgtttccaaactcc 23514308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 824809 - 824886
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  824809 aatcattgaggacaatgcttcttctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 824886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 5396299 - 5396376
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  5396299 aatcattgaggacaatgtttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 5396376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 8717028 - 8717105
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  8717028 aatcattgaggacaatgcttctcctaagcgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 8717105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 14550260 - 14550337
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  14550260 aatcattgagaacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 14550337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 15064955 - 15065032
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  15064955 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgttttcaaactcc 15065032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 15207613 - 15207536
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  15207613 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcatagtgtttccaaactcc 15207536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 15917810 - 15917737
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaa 297  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  15917810 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaa 15917737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 16150535 - 16150458
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  16150535 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgttttcaaactcc 16150458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 16531269 - 16531346
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  16531269 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtttttagtcgtagtgtttccaaactcc 16531346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 16634393 - 16634316
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  16634393 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtttttagtcgtagtgtttccaaactcc 16634316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 18594318 - 18594241
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  18594318 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgcttccaaactcc 18594241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 18617366 - 18617443
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  18617366 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgcttccaaactcc 18617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 12566181 - 12566260
Alignment:
Q  223 taaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  12566181 taaatcattgaggacaatgcttctcctaactgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 12566260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 11927960 - 11927883
Alignment:
Q  226 atcattgaggacaatgcttctcctaagtgtgggggag--cctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||||||    
T  11927960 atcattgaggacaatgcttctcctaagtgtgggggggggcctaataaagtgtctttagtcgtagtgtttccaaactcc 11927883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13657085 - 13657162
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  13657085 aatcattgaggacaatgcttctcgtaattgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13657162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 18286787 - 18286864
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  18286787 aatcatttaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcatagtgtttccaaactcc 18286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13355401 - 13355479
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg--ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||| |||||    
T  13355401 aatcattgaggacaatgcttctcctaagtgtggaggggagcctaataaagtgtcttgagtcgtagtgtttccagactcc 13355479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 48802901 - 48802824
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||  |||||||||||||||||||||    
T  48802901 aatcattgaggacaatgcttctcctaagtgtggggggagtctaataaagtgtcttgtgtcgtagtgtttccaaactcc 48802824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 20107457 - 20107534
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||  |||||||||||| ||||||||    
T  20107457 aatcattgaggacaatgtttctcctaagtgtggggggagcctaataaagtgtcttgtgtcgtagtgttttcaaactcc 20107534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 4311905 - 4311972
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtg-tgggggagcctaataaattgtctttagtcgtagtgtt 291  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||  |||| |||||||    
T  4311905 aatcatcgaggacaatgcttatcctaagtgttgggggagcctaataaagtgtctagagtcatagtgtt 4311972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 4792437 - 4792393
Alignment:
Q  257 ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||    
T  4792437 ggggagcctaataaagtgtcttgagtcatagtgtttccaaactcc 4792393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 8783005 - 8782968
Alignment:
Q  264 ctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  8783005 ctaataaagtgtcttgagtcgtagtgtttccaaactcc 8782968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 6e-71; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 23601910 - 23601767
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23601910 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 23601811  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  23601810 ttcatctccaaggtccaccttatggacttcaataaaattgtgag 23601767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 24218773 - 24218916
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  24218773 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttctgatacatgatgcaacacc 24218872  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24218873 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 24218916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 18487333 - 18487190
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  18487333 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttctgatacatgatgcaacacc 18487234  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  18487233 ttcacctccaaggtccaccttatggactacaataaaattgtgag 18487190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 24939474 - 24939617
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24939474 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 24939573  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24939574 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 24939617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 22828029 - 22827886
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |    
T  22828029 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaataatcaaatgttctgatacatgatgcaacacc 22827930  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||    
T  22827929 ttcacctccaaggtctaccttatggacttcattaaaattgtgag 22827886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 20446118 - 20445975
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||| |    
T  20446118 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaagtaaatgaataaagcaatcaaatgttccgatacatgatgcaacacc 20446019  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  20446018 ttcacctccaaggtctaccttatggacttcaataaacttgtgag 20445975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 21282180 - 21282038
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  21282180 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggaactcaaataaatgaataaaa-aatcaaatgttccgatacatgatgcaacacc 21282082  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  21282081 ttcacctccaaggtctatcttatggacttcaataaaattgtgag 21282038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 23711972 - 23711832
Alignment:
Q  15 acaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatctt 114  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||    
T  23711972 acaaggtgttgaaatggtcgggataagaaacgatgtcctaaggggcaaccaaataaatgaataacacaatcaaatgttccgat-catgatgcaacacctt 23711874  T
Q  115 cacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||| |||| ||| |||||||||||||    
T  23711873 cacctccaaggtccaccttgtggatttccataaaattgtgag 23711832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 20445885 - 20445805
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  20445885 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20445805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 21281966 - 21281886
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  21281966 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 21281886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 23601698 - 23601618
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  23601698 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 23601618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 23711731 - 23711651
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  23711731 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 23711651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 15734697 - 15734774
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15734697 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 15734774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 20596881 - 20596804
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  20596881 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20596804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 20609458 - 20609381
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  20609458 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20609381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 20791767 - 20791690
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  20791767 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20791690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 23747213 - 23747290
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  23747213 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 23747290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 24954226 - 24954149
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  24954226 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 24954149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 25007835 - 25007758
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  25007835 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 25007758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 26846836 - 26846913
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  26846836 aatcattgaggacaatgcttctcctaagtgttgggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 26846913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 30760673 - 30760596
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  30760673 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 30760596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 22854739 - 22854819
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22854739 ttaaatcattgaggacaatgcttctcctaagcgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22854819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 24218994 - 24219074
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||    
T  24218994 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 24219074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 24939689 - 24939769
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  24939689 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagttgtagtgtttccaaactcc 24939769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 18072063 - 18072140
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  18072063 aatcattgaggacaatgcttctcctaggtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 18072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 20621325 - 20621402
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  20621325 aatcattgaggacaatgcttctcctaagtttggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20621402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 22318542 - 22318465
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  22318542 aatcattgatgacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22318465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 25117195 - 25117118
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  25117195 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgttgtgtttccaaactcc 25117118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 25176286 - 25176209
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  25176286 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgttgtgtttccaaactcc 25176209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 20603168 - 20603090
Alignment:
Q  225 aatcattgagg-acaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  20603168 aatcattgaggcacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20603090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 18487118 - 18487038
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||    
T  18487118 ttaaatcatggaggacaatgcttctcctaagtgtggggggagtctaataaagtgtcttgagtcgtagtgtttccaaactcc 18487038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 25008046 - 25007923
Alignment:
Q  33 cgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttc-acctccaaggtccacc 131  Q
    |||||||||||| ||||||||| ||||||| |  |||   ||| |||| || |||||||| ||  ||||||||||||| |||| |||||||||| || ||    
T  25008046 cgggctaagaaatgatgtcctacggggcaaccgcatatccgaagaaaataaccaaatgtttcggaacatgatgcaaca-cttcaacctccaaggccctcc 25007948  T
Q  132 ttatggacttcaataaaattgtgag 156  Q
     ||||||| ||||||||| ||||||    
T  25007947 ctatggacctcaataaaaatgtgag 25007923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 22318747 - 22318624
Alignment:
Q  33 cgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccacct 132  Q
    |||||||||||| || |||||||||||||| |  |||   ||| | || || |||||| | ||  |||||||||||||  | |||||||||||||| ||     
T  22318747 cgggctaagaaatgacgtcctaaggggcaaccgcatatccgaagagaataaccaaatgcttcggcacatgatgcaacacttccacctccaaggtcctccc 22318648  T
Q  133 tatggacttcaataaaattgtgag 156  Q
    ||||||| ||||||||| ||||||    
T  22318647 tatggacctcaataaaaatgtgag 22318624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 20574610 - 20574644
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg 256  Q
    ||||||||||||||||||||||||||| |||||||    
T  20574610 ttaaatcattgaggacaatgcttctccaaagtgtg 20574644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 22947643 - 22947680
Alignment:
Q  264 ctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  22947643 ctaataaagtgtcttgagtcgtagtgtttccaaactcc 22947680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 6e-71; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 11497883 - 11497740
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11497883 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 11497784  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11497783 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 11497740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 10629691 - 10629834
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10629691 agacaaggtgttgaaatgatcgggctaagaaacggtgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 10629790  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10629791 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 10629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 18290965 - 18291107
Alignment:
Q  14 gacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatct 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18290965 gacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggaaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacct 18291064  T
Q  114 tcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    | ||||| |||||||||||||||||||||||||||||||||||    
T  18291065 taacctctaaggtccaccttatggacttcaataaaattgtgag 18291107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 15349114 - 15348970
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaa-taaatgaataaaacaatcaaatgttccgatacatgatgcaacat 111  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||     
T  15349114 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaaataaatgaataaaataatcaaatgttccgatacatgatgcaacac 15349015  T
Q  112 cttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  15349014 cttcacctccaaggtccaccttatgaacttcaataaaattgtgag 15348970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 14687042 - 14686899
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| |    
T  14687042 agacaaggtgttgaaatgatcaggctaagaaacgatgtcctaaggggcaatacaataaatgaataaaacaatcaaatgttctgatacatgatgcaacacc 14686943  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14686942 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 14686899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 45235501 - 45235358
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  45235501 agacaaggtgttgaaatgatcgggctaagaaacgatttcctaaggggcaatcaaataaatgaataaaacaatcaaatgttctgatacatgatgcaacacc 45235402  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||    
T  45235401 ttcacctcaaaggtctaccttatggacttcattaaaattgtgag 45235358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 42711046 - 42710905
Alignment:
Q  15 acaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatctt 114  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||    
T  42711046 acaaggtgttgaaatggtcgggataagaaacgatgtcctaaggggcaatcaaataaatgaataacacaatcaaatgttccaatacatgatgcaacacctt 42710947  T
Q  115 cacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||| |||| ||| |||||||||||||    
T  42710946 cacctccaaggtccaccttgtggatttccataaaattgtgag 42710905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 45240127 - 45240047
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttc 93  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45240127 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttc 45240047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 11497668 - 11497588
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  11497668 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 11497588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13822077 - 13822154
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  13822077 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13822154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 15261140 - 15261063
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15261140 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 15261063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 22110122 - 22110199
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22110122 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22110199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 42710784 - 42710707
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42710784 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 42710707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 10629906 - 10629986
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  10629906 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcatagtgtttccaaactcc 10629986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 14686822 - 14686742
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  14686822 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 14686742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 18082517 - 18082438
Alignment:
Q  223 taaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  18082517 taaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 18082438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 45235281 - 45235202
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  45235281 ttaaatcattgaggacaatgtttctcctaagtgtgggggagcctaataaagtgtctttagtcatagtgttttcaaactcc 45235202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 3353812 - 3353889
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  3353812 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 3353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 18291176 - 18291256
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  18291176 ttaaatcattgaggaaaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 18291256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 10649572 - 10649652
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||    
T  10649572 ttaactcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcattagtcatagtgtttccaaactcc 10649652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 15348868 - 15348788
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  15348868 ttaaatcatttaggacaatgtttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 15348788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 15253511 - 15253588
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  15253511 aatcattgaggacaatgcgtctcttaagtgtggggggagcctaataaagtatctttagtcgtagtgtttccaaactcc 15253588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 15864672 - 15864749
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||  |||||||    
T  15864672 aatcattgaggacaatgcttctgctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttaaaaactcc 15864749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 17485949 - 17485871
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaact 299  Q
    ||||||||||||||||||||||||||| ||||||| |||| || ||||||| |||||| ||||||||||||||||||||    
T  17485949 ttaaatcattgaggacaatgcttctcccaagtgtggggggggcttaataaagtgtcttgagtcgtagtgtttccaaact 17485871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 38425938 - 38425983
Alignment:
Q  256 gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  38425938 gggggagcctaataaagtgtcttgagtcgtagtgttttcaaactcc 38425983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 6e-71; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 27045811 - 27045954
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045811 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 27045910  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  27045911 ttcacctccaaggtccaccttaaggacttcaataaaattgtgag 27045954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 27046035 - 27046115
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27046035 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 27046115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 17095654 - 17095577
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  17095654 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 17095577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 21799715 - 21799638
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  21799715 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 21799638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 21785666 - 21785591
Alignment:
Q  81 caatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  21785666 caatcaaatgttccgatacatgatgcaacaccttcacctccaagatccaccttatggactacaataaaattgtgag 21785591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 20071970 - 20071902
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20071970 ttaaatcattgaggacaatgcttctcctaagtgtgaggggagcctaataaagtgtctttagtcgtagtg 20071902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 3989259 - 3989326
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtt 291  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  3989259 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtt 3989326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 21785510 - 21785429
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg--agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||||||| |||||||||||||||||    
T  21785510 ttaaatcattgaggacaatgcttctcctaagtatggggggaagcttaataaagtgtctttagtcctagtgtttccaaactcc 21785429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 8652186 - 8652263
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||  |||||||||||||||||||||    
T  8652186 aatcattgaggacaatgcttctcctaagtgtggggggagccaaataaagtgtcttgtgtcgtagtgtttccaaactcc 8652263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 20236631 - 20236708
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  20236631 aatcattgaggacaatgcttctcttgagtgtggggggagcctaataaagtgtctttagttgtagtgtttccaaactcc 20236708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 8948604 - 8948529
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||    
T  8948604 aatcattgagaacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgta--gtttccaaactcc 8948529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 19876935 - 19876814
Alignment:
Q  35 ggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccacctta 134  Q
    |||||||||| ||||||||||||||||| || || |  ||| |||||||||||||| | ||| |||||||| | ||  | |||||||||||||| |||||    
T  19876935 ggctaagaaatgatgtcctaaggggcaaccacatgaccgaagaaaacaatcaaatgcttcgaaacatgatggagcacttccacctccaaggtcctcctta 19876836  T
Q  135 tggacttcaataaaattgtgag 156  Q
    ||||| ||||||||| ||||||    
T  19876835 tggacctcaataaaaatgtgag 19876814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 21785713 - 21785658
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaat 68  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21785713 agacaaggtgttgaaatgatcgggttaagaaacgatgtcctaaggggcaatcaaat 21785658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 9595 - 9452
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9595 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacata 9496  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  9495 ttcacctccaaggtccaacttatggacttcaataaaattgtgag 9452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 9371 - 9322
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggggagcctaataaa 271  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9371 ttaaatcattgaggaaaatgcttctcctaagtgtgggggagcctaataaa 9322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 128; Significance: 4e-66; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 17301 - 17444
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  17301 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaatacaacaatcaaatgttccgatacatgatgcaacacc 17400  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17401 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 17444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 10320 - 10399
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  10320 ttaaatcattgaggagaatgcttctcctaagtgtgggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 10399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 17519 - 17598
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  17519 ttaaatcattgaggagaatgcttctcctaagtgtgggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 17598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 4e-66; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 17619685 - 17619828
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17619685 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcagtcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 17619784  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17619785 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 17619828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 20040339 - 20040196
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20040339 agacaaggtgttgaaatgatcaggctaagaaacgatttcctaaggggcaatcaaataaatgaataaaacaatcaaatgtttcgatacatgatgcaacatc 20040240  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20040239 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 20040196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 20001242 - 20001385
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |    
T  20001242 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaatgaatgaatcaaacaatccaatgttccgatacatgatgcaacacc 20001341  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  20001342 ttcacctccaaggtccaccttatggactacaataaaattgtgag 20001385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 21855038 - 21854903
Alignment:
Q  21 tgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctc 120  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21855038 tgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaaataaacgaataaaacaatcaaatgtttcgatacatgatgcaacaccttcacctc 21854939  T
Q  121 caaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21854938 caaggtctaccttatggacttcaataaaattgtgag 21854903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 20001481 - 20001561
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  20001481 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 20711626 - 20711706
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  20711626 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20711706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 21854834 - 21854754
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  21854834 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 21854754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 8313630 - 8313707
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  8313630 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 8313707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 8323903 - 8323826
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8323903 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 8323826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 16419662 - 16419585
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16419662 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 16419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 19766714 - 19766791
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  19766714 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 19766791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 21099842 - 21099765
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  21099842 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 21099765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 21381255 - 21381332
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  21381255 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 21381332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 21955238 - 21955315
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  21955238 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 21955315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 22101578 - 22101655
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22101578 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22101655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 23910603 - 23910680
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  23910603 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 23910680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 29333780 - 29333857
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29333780 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 29333857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 19365190 - 19365270
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||    
T  19365190 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttcctaactcc 19365270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 20040043 - 20039963
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||    
T  20040043 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttcccaactcc 20039963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 22034589 - 22034512
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  22034589 aatcattgaggacaatgcttctactaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 22100687 - 22100610
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  22100687 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttggtcgtagtgtttccaaactcc 22100610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 22369128 - 22369205
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  22369128 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgttcccaaactcc 22369205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 17619901 - 17619977
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaa 297  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17619901 ttaaatcattgagtacaatgcttctcctaagtgtgtggggagcctaataaagtgtctttagtcgtagtgtttccaaa 17619977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 21942488 - 21942412
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||    
T  21942488 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtg-ttccaaactcc 21942412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 11347988 - 11347910
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaa-taaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  11347988 aatcattgaggacaatgtttctcctaagtgtggggggagcctaaataaagtgtctttagtcgtagtgtttccaaactcc 11347910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 21830232 - 21830277
Alignment:
Q  256 gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  21830232 gggggagcctaataaagtgtctttagtcatagtgtttccaaactcc 21830277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 22034793 - 22034670
Alignment:
Q  33 cgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttc-acctccaaggtccacc 131  Q
    |||||||||||| ||||||||||||||||| |  |||   ||| |||| ||||||||| | ||  ||||||||||||| |||| ||||||||| ||| ||    
T  22034793 cgggctaagaaatgatgtcctaaggggcaaccgcatatccgaagaaaataatcaaatgcttcggaacatgatgcaaca-cttcaacctccaagttcctcc 22034695  T
Q  132 ttatggacttcaataaaattgtgag 156  Q
     ||||||| ||||||||| ||||||    
T  22034694 ctatggacctcaataaaaatgtgag 22034670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 21826596 - 21826631
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg 260  Q
    ||||||||||||||||||||||||||||||||||||    
T  21826596 aatcattgaggacaatgcttctcctaagtgtggggg 21826631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 16419798 - 16419740
Alignment:
Q  98 acatgatgcaacatcttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||  | |||||||||||||| || ||||||| ||||||||| ||||||    
T  16419798 acatgatgcaacacttccacctccaaggtcctccctatggacctcaataaaaatgtgag 16419740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 21826341 - 21826442
Alignment:
Q  38 taagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccaccttatgg 137  Q
    |||| |||||||||| ||||||||| || |||   ||| ||||||| |||||| | ||  |||||||||| ||  |||||||||||||||| || |||||    
T  21826341 taaggaacgatgtccaaaggggcaaccacatatccgaagaaaacaaccaaatgcttcggaacatgatgcaccactttcacctccaaggtcctccatatgg 21826440  T
Q  138 ac 139  Q
    ||    
T  21826441 ac 21826442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 18188843 - 18188700
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18188843 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 18188744  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18188743 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 18188700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 18852961 - 18853104
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |    
T  18852961 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaattaaataaatgaataaaacaatcaaatgttctgatacatgatgcaacacc 18853060  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18853061 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 18853104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 22062781 - 22062640
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  22062781 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataa--caatcaaatgttccgatacatgatgcaacatc 22062684  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  22062683 ttcacctccaaggtccaccttaaggacttcaataaaattgtgag 22062640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 17818460 - 17818603
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||| |    
T  17818460 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaaataaatgaataaaaaaatcaaatgttctgatacatgatgcaacacc 17818559  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17818560 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 17818603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 15698719 - 15698796
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15698719 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 15698796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 20169407 - 20169484
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  20169407 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20169484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 21561480 - 21561403
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  21561480 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 21561403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 22166601 - 22166524
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  22166601 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22166524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 22242976 - 22243053
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22242976 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22243053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 18853176 - 18853256
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||    
T  18853176 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 18853256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 29594867 - 29594942
Alignment:
Q  227 tcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29594867 tcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 29594942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 11218790 - 11218867
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  11218790 aatcattgaggacaatgcttctcctaagtgtgggggaagcctaataaagtgtcttttgtcgtagtgtttccaaactcc 11218867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 18011030 - 18011107
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  18011030 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgttttcaaactcc 18011107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 18447381 - 18447458
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  18447381 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 18447458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 20017280 - 20017203
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  20017280 aatcattgaggacaatgcttctcctaagtttggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 20017203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 22062559 - 22062479
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||    
T  22062559 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcaatagtcgtagtgtttccaaactcc 22062479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 18188628 - 18188547
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg--agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||| ||||||||||||||||||||||    
T  18188628 ttaaatcattgaggacaatgcttctcctacgtgtgggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 18188547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 19586857 - 19586777
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttcc 94  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  19586857 agacaaggtgttgaaatggccgggctaagaaacgatgtcctaaggggcaatcgaataaatgaat-aaacaatcaaatgttcc 19586777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 25624931 - 25625008
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  25624931 aatcattgaggacaatgcttctcctaagtgtggggggagcttaataaagtgtcttgagtcgtagtgtttccaaactcc 25625008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 25632399 - 25632319
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  25632399 ttaattcattgaggacaatgcttctcccaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 25632319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 23519021 - 23518879
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||   | |||||||||| ||||||| |||| ||||||| || |  ||| |||| ||| ||||  ||||  ||||||||||||| |    
T  23519021 agacaaggtgttgaaatctccaggctaagaaatgatgtccaaaggagcaatcacatgaccgaagaaaataataaaattctccggaacatgatgcaacaac 23518922  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtga 155  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  23518921 ttcacctacaaggtccaccttatggacctcaataaaattgtga 23518879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 22768170 - 22768093
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||| ||||||||||||    
T  22768170 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcagtagtcgtagtatttccaaactcc 22768093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 24856296 - 24856219
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || |  |||||||||||||||||||||||    
T  24856296 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgacagtagtcgtagtgtttccaaactcc 24856219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 15851036 - 15850956
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||  |||||||||||||||||||||||    
T  15851036 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcataataaagtatcaatagtcgtagtgtttccaaactcc 15850956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 19967086 - 19967010
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaa 297  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |  |||||||||||||||||    
T  19967086 ttaaatcattgaggacaatgcttctcctaagtgtgaggggagcctaataaagtgtcgtgtgtcgtagtgtttccaaa 19967010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 260
Target Start/End: Original strand, 20079668 - 20079706
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg 260  Q
    |||||||||||||||||||||||| || |||||||||||    
T  20079668 ttaaatcattgaggacaatgcttcacccaagtgtggggg 20079706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 23344507 - 23344555
Alignment:
Q  100 atgatgcaacatcttcacctccaaggtccaccttatggacttcaataaa 148  Q
    ||||||||||| ||||||||||||||||| |||| | |||| |||||||    
T  23344507 atgatgcaacaccttcacctccaaggtcccccttttagactccaataaa 23344555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 6813806 - 6813949
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6813806 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttctgatacatgatgcaacatc 6813905  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  6813906 ttcacctccaaggtccactttaaggacttcaataaaattgtgag 6813949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 9362227 - 9362084
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9362227 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 9362128  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9362127 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 9362084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 13090077 - 13089934
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13090077 agacaaggtgttgaaatgaccgggctaagaaacgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 13089978  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13089977 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 13089934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 20559973 - 20560116
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20559973 agacaaggtgttaaaatgatcgggctaagaaatgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 20560072  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20560073 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 20560116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 20562281 - 20562424
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20562281 agacaaggtgttaaaatgatcgggctaagaaatgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 20562380  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20562381 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 20562424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 20564589 - 20564732
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20564589 agacaaggtgttaaaatgatcgggctaagaaatgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 20564688  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20564689 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 20564732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 13096654 - 13096794
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||      
T  13096654 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcactcaaataaatgaataaaacaatcaaatgttccgatacatgatggaaca-- 13096751  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
      ||||||||||||| ||||||||||||||||||||||||||||    
T  13096752 -ccacctccaaggtctaccttatggacttcaataaaattgtgag 13096794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 12777767 - 12777631
Alignment:
Q  20 gtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacct 119  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||    
T  12777767 gtgttgaaatggtcgggataagaaacgatgtgctaaggggcaatcaaataaatgcataagacaatcaaatgttccgatacatgatacaacaccttcacct 12777668  T
Q  120 ccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  12777667 ccaaggtccaccttatggacttcaataaaattgtgag 12777631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 136
Target Start/End: Complemental strand, 3246786 - 3246663
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||||| |    
T  3246786 agacaaggtgttgaaataatcgggctaagaaacgatgtcctaaggggcaatcgaataaatgaataaaacaatcaaatgctctgaaacatgatgcaacacc 3246687  T
Q  113 ttcacctccaaggtccaccttatg 136  Q
    ||||||||||||||||||||||||    
T  3246686 ttcacctccaaggtccaccttatg 3246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 6814030 - 6814110
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  6814030 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 6814110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 13096859 - 13096939
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  13096859 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13096939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 12777573 - 12777494
Alignment:
Q  223 taaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  12777573 taaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 12777494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 3340256 - 3340179
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3340256 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 3340179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 4369853 - 4369930
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  4369853 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 4369930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 7599518 - 7599595
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  7599518 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 7599595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 10146174 - 10146251
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  10146174 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 10146251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 10161228 - 10161151
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10161228 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 10161151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 10603523 - 10603446
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10603523 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 10603446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 13188469 - 13188392
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13188469 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13188392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 13505558 - 13505481
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13505558 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13505481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 15557997 - 15557920
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15557997 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 15557920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 15630008 - 15629931
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15630008 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 15629931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 15945794 - 15945871
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15945794 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 15945871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 22165363 - 22165286
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  22165363 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22165286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 9362023 - 9361943
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  9362023 ttaaatcattgaggacaatgcttctcctaagtgtggggggggcctaataaagtgtctttagtcgtagtgtttccaaactcc 9361943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 11946574 - 11946654
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  11946574 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtaatgtttccaaactcc 11946654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 13089862 - 13089782
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13089862 ttaaatcattgaggacaatgcttctcttaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13089782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 20560188 - 20560268
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  20560188 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtactgtttccaaactcc 20560268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 20562496 - 20562576
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  20562496 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtactgtttccaaactcc 20562576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 20564804 - 20564884
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  20564804 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtactgtttccaaactcc 20564884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 12194541 - 12194467
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaac 298  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  12194541 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaac 12194467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 11865959 - 11866036
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  11865959 aatcattgaggataatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 11866036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 13137221 - 13137144
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  13137221 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgttttcaaactcc 13137144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 15644252 - 15644329
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15644252 aatcattgagggcaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 15644329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 16449786 - 16449709
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16449786 aatcattgatgacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 16449709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 16654893 - 16654970
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  16654893 aatcattgaggacaatgattctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 16654970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 10547925 - 10547845
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  10547925 ttaaatcattgaggaaaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtatttccaaactcc 10547845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 12188127 - 12188053
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaac 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  12188127 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttctaaac 12188053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13694064 - 13694142
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcct-aataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  13694064 aatcattgaggacaatgcttctcctaagtgtggggggagcctaaataaagtgtctttagtcgtagtgtttccaaactcc 13694142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13689819 - 13689896
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  13689819 aatcattgaggacaatgcttctcgtaattgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 13689896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 13196491 - 13196413
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcct-aataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||    
T  13196491 aatcattgaggacaatgcttctcctaagtgtggggcgagcctaaataaagtgtctttagtagtagtgtttccaaactcc 13196413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 16374531 - 16374455
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||    
T  16374531 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtc-atagtcgtagtgtttccaaactcc 16374455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 3246555 - 3246480
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactc 300  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||  |||||||||| ||||||||||    
T  3246555 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctagagtcgtagtg-ttccaaactc 3246480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13064132 - 13064208
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtg-tgggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||| |||||||||| |||||| |||||||||||    
T  13064132 aatcatggaggacaatgcttctcctaagtgaggggggagcctaataaagtgtctttagtggtagtg-ttccaaactcc 13064208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 17386927 - 17387003
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||| ||||| |||||||||||    
T  17386927 aatcattgaggacaatgcttttcctaagtgtggggggagcctaataaagtttctttagtcatagtg-ttccaaactcc 17387003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 1991889 - 1991950
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtag 287  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||    
T  1991889 aatcattgaggacaatgcttctcccaagtgtggggg-gcctaataaagtgtcttgagtcgtag 1991950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 12161211 - 12161168
Alignment:
Q  256 gggggagcctaataaattgtctttagtcgtagtgtttccaaact 299  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  12161211 gggggagcctaataaagggtctttagtcgtagtgtttccaaact 12161168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 37941556 - 37941619
Alignment:
Q  243 ttctcctaagtgtggggg-agcctaataaat----tgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||| |||||||||||     |||||||||||||||||||||||||||||    
T  37941556 ttctcctaagtgtggggggagcctaataaagaaagtgtctttagtcgtagtgtttccaaactcc 37941619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 16654682 - 16654763
Alignment:
Q  47 atgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtcc 128  Q
    ||||||||||||||||||  |||   ||| |||| ||||||||| | ||  |||||||||| ||||||||||||||||||||    
T  16654682 atgtcctaaggggcaatcgcatatccgaagaaaataatcaaatgcttcggaacatgatgcaccatcttcacctccaaggtcc 16654763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 13196627 - 13196569
Alignment:
Q  98 acatgatgcaacatcttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    |||||||||||||| | |||||||||||||| || ||||||  ||||||||| ||||||    
T  13196627 acatgatgcaacatttccacctccaaggtcctccctatggaactcaataaaaatgtgag 13196569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 124; Significance: 9e-64; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 8542 - 8399
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  8542 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaatgggcaatcaaataaatgaataaaacaatcaaatgttccaatacatgatgcaacacc 8443  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8442 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 12714 - 12571
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  12714 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaatgggcaatcaaataaatgaataaaacaatcaaatgttccaatacatgatgcaacacc 12615  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  12614 ttcacctccaaggtctaccttatggacttcaataaaattgtgag 12571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 8320 - 8241
Alignment:
Q  223 taaatcattgaggacaatgcttctcctaagtgtggg-ggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||    
T  8320 taaatcattgaggacaatgcttctcctaagtgtgggaggagcctaataaagtgtctttagttgtagtgtttccaatctcc 8241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 12492 - 12413
Alignment:
Q  223 taaatcattgaggacaatgcttctcctaagtgtggg-ggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||    
T  12492 taaatcattgaggacaatgcttctcctaagtgtgggaggagcctaataaagtgtctttagttgtagtgtttccaatctcc 12413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 1551 - 1693
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1551 agacaaggtgttgaaatgatcgggctaagaaatgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacacc 1650  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtga 155  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  1651 ttcacctccaaagtccaccttatggactacaataaaattgtga 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 1777 - 1857
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  1777 ttaaatcattgaggacaatgcttatcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 51817 - 51673
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaa-taaatgaataaaacaatcaaatgttccgatacatgatgcaacat 111  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||     
T  51817 agacaaggtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaaatacatgaataaaacaatcaaatgttccgatacatgatgcaacac 51718  T
Q  112 cttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  51717 cttcacctccaaggtccaccttatggacttcaatacaattgtgag 51673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 51544 - 51467
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||    
T  51544 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgttaccaaactcc 51467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 9748 - 9824
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9748 aatcattgaggacaatgcttctcctaagtgtgggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 9824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 201 - 278
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  201 aatcattgaggacaatgcttctcctaagtgttgggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 6 - 83
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  6 aatcattgaggacaatgcttctcctaagtgtggggagagcctaataaagtgtctttagtcgtagtgtttccaaactcc 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 29674 - 29751
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29674 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 29751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 90438 - 90515
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  90438 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 90515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 90222 - 90351
Alignment:
Q  20 gtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacct 119  Q
    |||||||| |||  || ||||| || ||||||||||||||||| |  |||   ||| |||| || |||||| | ||| |||||||||| ||  |||||||    
T  90222 gtgttgaattgacgggactaaggaatgatgtcctaaggggcaaccgcatatccgaagaaaataaccaaatgcttcgaaacatgatgcaccactttcacct 90321  T
Q  120 ccaaggtccaccttatggacttcaataaaa 149  Q
    ||||||||| || ||||||| |||||||||    
T  90322 ccaaggtcctccctatggacctcaataaaa 90351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 122533 - 122610
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  122533 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 122610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 19014 - 18937
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  19014 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 18937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 355547 - 355470
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  355547 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 355470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 252920 - 252843
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  252920 aatcattgaggacaatgtttctcctaagtttggggggagcctaataaagtgtctttagtcgtagtgttttcaaactcc 252843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 116707 - 116784
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  116707 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 116784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 16774813 - 16774890
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  16774813 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 16774890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 17589570 - 17589647
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  17589570 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 17589647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 22045712 - 22045635
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  22045712 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22045635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 23160418 - 23160341
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  23160418 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 23160341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 23571675 - 23571598
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  23571675 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 23571598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 25356674 - 25356751
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  25356674 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 25356751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 27626756 - 27626833
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27626756 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 27626833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 27630681 - 27630758
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27630681 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 27630758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 27769847 - 27769770
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  27769847 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 27769770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 24170498 - 24170574
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  24170498 aatcattgaggacaatgcttctcctaagtgtgggggagcctaataaagtgtcttgtgtcgtagtgtttccaaactcc 24170574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 22664249 - 22664326
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22664249 aatcattgatgacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 22664326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 23647100 - 23647177
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  23647100 aatcattgaggacaatgcttctcctaagtgtggggggatcctaataaagtgtctttagtcgtagtgtttccaaactcc 23647177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 25145816 - 25145739
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  25145816 aatcattgaggacaatgcttctcctaagtgtggggggagtctaataaagtgtctttagtcgtagtgtttccaaactcc 25145739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 24517376 - 24517296
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| |||||||    
T  24517376 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtatctttagtcgtagtgtttcaaaactcc 24517296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 24821074 - 24820996
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg--agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||    
T  24821074 aatcattgaggacaatgcttctcctaagtgtgggggggagcctaataaagtgtctttagtcgtagtgtttcccaactcc 24820996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 12666 - 12589
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  12666 aatcattgaggacagtgcttctcctaagtgtggggggagtctaataaagtgtctttagtcgtagtgtttccaaactcc 12589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 24796336 - 24796259
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||    
T  24796336 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcagtagtcgtagtgtttccaaactcc 24796259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 23630553 - 23630630
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||  ||| |||||||||||||||||    
T  23630553 aatcattgaggacaatgcttctcctgagtgttgggggagcctaataaagtgtcttgtgtcatagtgtttccaaactcc 23630630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 26192669 - 26192592
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||    
T  26192669 aatcatttagggcaatgcttctcctaagtgtggggggagcctaataaagtgtttttagtcgtagtgttttcaaactcc 26192592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 25339383 - 25339250
Alignment:
Q  15 acaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatctt 114  Q
    |||| |||||||||||  ||||||  | || ||||||| |||||||||||  || | |||  ||||||| |||||| || |  ||||||||||||| |||    
T  25339383 acaaggtgttgaaatggacgggctgcggaatgatgtccaaaggggcaatcgcatgactgaggaaaacaaccaaatgctctggaacatgatgcaacacctt 25339284  T
Q  115 cacctccaaggtccaccttatggacttcaataaa 148  Q
    || || |||||||| |||||||||| ||||||||    
T  25339283 catctgcaaggtcccccttatggacctcaataaa 25339250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 24501257 - 24501304
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggc 60  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||    
T  24501257 agacaaggtgttgaaatggccgggctaagaaacgatgtcctaaggggc 24501304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 25368896 - 25368772
Alignment:
Q  21 tgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatg-ttccgatacatgatgcaacatcttcacct 119  Q
    |||||||||  |||||| |||||| ||||||||||||| ||| |  |||   ||| | || ||||||||| ||| || ||||||||||||||||  ||||    
T  25368896 tgttgaaatattcgggcaaagaaatgatgtcctaagggccaaccgcatatccgaagagaataatcaaatgcttcaga-acatgatgcaacatctcaacct 25368798  T
Q  120 ccaaggtccaccttatggacttcaat 145  Q
    ||||||||| |||||||||| |||||    
T  25368797 ccaaggtcctccttatggacctcaat 25368772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 17599 - 17519
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||    
T  17599 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttcccaactcc 17519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 17815 - 17752
Alignment:
Q  93 ccgatacatgatgcaacatcttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17815 ccgatacatgatgcaacatcttcacctccaaggtccaccttatggacttcaataaaattgtgag 17752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 11187 - 11044
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatc 112  Q
    |||||| |||||||||||  || |||||  ||| |||||  ||||||||||| |||||||| | |||| ||||||||| || |  ||||| ||||||| |    
T  11187 agacaaggtgttgaaatggccgagctaatgaacaatgtctaaaggggcaatcgaataaatgtagaaaataatcaaatgctctggaacatgctgcaacacc 11088  T
Q  113 ttcacctccaaggtccaccttatggacttcaataaaattgtgag 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  11087 ttcacctccaaggtccaccttatggacctcaataaaattgtgag 11044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 38775 - 38697
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg--agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  38775 aatcattgaggacaatgcttctcctaagtgtgggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 38697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 276 - 353
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  276 aatcattgaggacaatgcttctcctaagtgtggggggagccaaataaagtgtctttagtcgtagtgtttccaaactcc 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 155
Target Start/End: Original strand, 75 - 197
Alignment:
Q  33 cgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatg-ttccgatacatgatgcaacatcttcacctccaaggtccacc 131  Q
    |||||||||||| ||||||||||||||||| |  |||   ||| |||| || |||||| ||| || |||||||||||||  | |||||||||||||| ||    
T  75 cgggctaagaaatgatgtcctaaggggcaaccgcatatccgaagaaaataaccaaatgcttcaga-acatgatgcaacacttccacctccaaggtcctcc 173  T
Q  132 ttatggacttcaataaaattgtga 155  Q
     ||||||| ||||||||| |||||    
T  174 ctatggacctcaataaaaatgtga 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 13200 - 13277
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  13200 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttacaaactcc 13277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 9355 - 9432
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  9355 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 4658 - 4581
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  4658 aatcattgaggacaatgcttctcctaagtgtggggggagccttataaagtgtctttagtcgtagtgtttccaaactcc 4581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 4841 - 4730
Alignment:
Q  46 gatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccaccttatggacttcaat 145  Q
    ||||||||||||||||| || || |  ||| | || ||||||||| | ||  ||||||||||||| ||  ||||||||||||| || ||||||| |||||    
T  4841 gatgtcctaaggggcaaccacatcaccgaagagaataatcaaatgcttcggcacatgatgcaacacctaaacctccaaggtcctccctatggacctcaat 4742  T
Q  146 -aaaattgtgag 156  Q
     |||||||||||    
T  4741 gaaaattgtgag 4730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 23190 - 23113
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  23190 aatcattgaggacaatgtttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 23113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 46255 - 46178
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  46255 aatcattgaggacaatgcttctcctaagtttggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 46178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 29705 - 29778
Alignment:
Q  13 agacaaagtgttgaaatgatcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatca 86  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29705 agacaaggtgttgaaatgatcggactaagaaactatgtcctaaggggcaatcaaataaatgaataaaacaatca 29778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 25429 - 25352
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  25429 aatcattgagggcaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 25352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 24750 - 24827
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  24750 aatcattgaggacaatgcttctcctaagtatggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 24827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 115810 - 115887
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  115810 aatcattgaggacaatgtttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 115887  T

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Target: scaffold0020; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 120114 - 120191
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  120114 aatcattgaggacaatgtttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaactcc 120191  T

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Target: scaffold0020; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 115597 - 115720
Alignment:
Q  33 cgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccacct 132  Q
    |||||||||||| |||||||||||||| || |  |||   ||| | || || |||||| | ||  |||||||||||||  | |||||||||||||| ||     
T  115597 cgggctaagaaatgatgtcctaaggggaaaccgcatatccgaagagaataaccaaatgcttcggaacatgatgcaacacttccacctccaaggtcctccc 115696  T
Q  133 tatggacttcaataaaattgtgag 156  Q
    ||||||| ||||||||| ||||||    
T  115697 tatggacctcaataaaaatgtgag 115720  T

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Target: scaffold0020; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 119901 - 120024
Alignment:
Q  33 cgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccacct 132  Q
    |||||||||||| |||||||||||||| || |  |||   ||| | || || |||||| | ||  |||||||||||||  | |||||||||||||| ||     
T  119901 cgggctaagaaatgatgtcctaaggggaaaccgcatatccgaagagaataaccaaatgcttcggaacatgatgcaacacttccacctccaaggtcctccc 120000  T
Q  133 tatggacttcaataaaattgtgag 156  Q
    ||||||| ||||||||| ||||||    
T  120001 tatggacctcaataaaaatgtgag 120024  T

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Target: scaffold0679 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 226 - 301
Target Start/End: Original strand, 7177 - 7252
Alignment:
Q  226 atcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  7177 atcattgaggacaatgtttctcctaagtgtgggggaacctaataaagtgtctttagtagtagtgtttccaaactcc 7252  T

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Target: scaffold0031 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 22215 - 22298
Alignment:
Q  37 ctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctc 120  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  22215 ctaagaaacaatgtcctaaggggcgatcaaataaatgaataaaacaatcaaattctccgaaacatgatgcaacaccttcacctc 22298  T

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Target: scaffold0018 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 19240 - 19162
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg--agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||    
T  19240 aatcattgaggacaatgcttctcctaagtgtgggggggagcctaataaagtgtctttagtcgtagtgtttcctaactcc 19162  T

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Target: scaffold0577 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 5768 - 5845
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  5768 aatcattaaggacaatgcttctcctaagtgtagggggagcctaataaagtgtctttagtcgtagtgttttcaaactcc 5845  T

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Target: scaffold0322 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 7911 - 7988
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| |||||||    
T  7911 aatcattgaggacaatgcttctcctaagggtggggggagcctaataaagtgtctttagtcgtagtgtttctaaactcc 7988  T

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Target: scaffold0230 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 12650 - 12727
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  12650 aatcattgaggataatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgttaccaaactcc 12727  T

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Target: scaffold0216 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 10584 - 10661
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  10584 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttacaaactcc 10661  T

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Target: scaffold0146 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 22043 - 22120
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  22043 aatcattgaggacaatgcttctcctaagtttggggggagcctaataaagtgtctttagtcgtagtttttccaaactcc 22120  T

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Target: scaffold0127 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 240 - 167
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaa 297  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  240 aatcattgaggaaaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcgtagtgtttccaaa 167  T

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Target: scaffold0037 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 44613 - 44690
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  44613 aatcattgaggacaatgcttctcctcagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 44690  T

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Target: scaffold0037; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 52002 - 52079
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtgggg-gagcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  52002 aatcattgaggacaatgcttctcctcagtgtggggggagcctaataaagtgtcttgagtcgtagtgtttccaaactcc 52079  T

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Target: scaffold0162 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 36156 - 36080
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgtttccaaactc 300  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||    
T  36156 aatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtcttttgtcgtagtatttccaaactc 36080  T

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Target: scaffold0215 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 8019 - 7942
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg-agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||    
T  8019 aatcattgaggacaatgtttctcctaagtgtggggggagcctaataaagtgtctttagtcgtattgttttcaaactcc 7942  T

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Target: scaffold2037 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold2037
Description:

Target: scaffold2037; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 64 - 1
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcg 284  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  64 ttaaatcattgaggacaatgcttctcctaagtgtggggggagcctaataaagtgtctttagtcg 1  T

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Target: scaffold0402 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 6836 - 6953
Alignment:
Q  32 tcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccacc 131  Q
    ||||||||||||| |||||||||||||| || || |||   ||| | || ||||||||| | ||| ||||||||||||||||  ||||||||||||||||    
T  6836 tcgggctaagaaatgatgtcctaaggggaaaccacatatccgaagagaataatcaaatgcttcgaaacatgatgcaacatctcaacctccaaggtccacc 6935  T
Q  132 ttatggacttcaataaaa 149  Q
     ||||||| |||||||||    
T  6936 ctatggacctcaataaaa 6953  T

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Target: scaffold0367 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 11758 - 11823
Alignment:
Q  222 ttaaatcattgaggacaatgcttctcctaagtgtgggggagcctaataaattgtctttagtcgtagt 288  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||| |||||||||    
T  11758 ttaaatcattgaggacaatgcttctcctaagtatggggg-gcctaataaagtgtcttgagtcgtagt 11823  T

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Target: scaffold0375 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 11699 - 11765
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtg-ggggagcctaataaattgtctttagtcgtagtgt 290  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||    
T  11699 aatcattgaggacaatgcttctcctaagtgtgcgggaagcctaataaagtgtcttgtgtcgtagtgt 11765  T

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Target: scaffold0375; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 11479 - 11592
Alignment:
Q  32 tcgggctaagaaacgatgtcctaaggggcaatcaaataaatgaataaaacaatcaaatgttccgatacatgatgcaacatcttcacctccaaggtccacc 131  Q
    ||||||||||||| |||||||||||||||||||| |||   ||| |||| |||| |||| | ||  |||||||| |||||||  ||||||||||||| ||    
T  11479 tcgggctaagaaatgatgtcctaaggggcaatcacatatccgaagaaaataatcgaatgcttcggaacatgatgtaacatctcaacctccaaggtcctcc 11578  T
Q  132 ttatggacttcaat 145  Q
     ||||||| |||||    
T  11579 ctatggacctcaat 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 161009 - 161075
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgt-gggggagcctaataaattgtctttagtcgtagtgt 290  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||  ||||||||||    
T  161009 aatcattgaggacaatgcttcccctaagtgtggggggagcctaataaagtgtcttgtgtcgtagtgt 161075  T

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Target: scaffold0328 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 1285 - 1212
Alignment:
Q  228 cattgaggacaatgcttctcctaagtgtggggga-gcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| |||||| |||||| ||| |||||||||||    
T  1285 cattgaggacaatgcttctcccaagtgtgggggaggcgtaataaagtgtcttgagtcgttgtg-ttccaaactcc 1212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 59636 - 59596
Alignment:
Q  261 agcctaataaattgtctttagtcgtagtgtttccaaactcc 301  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  59636 agcctaataaagtgtctttagtcgtagtgtttccaaactcc 59596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1620 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 37 - 2
Alignment:
Q  225 aatcattgaggacaatgcttctcctaagtgtggggg 260  Q
    ||||||||||||||||||||||||||||||||||||    
T  37 aatcattgaggacaatgcttctcctaagtgtggggg 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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