View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16895_low_3 (Length: 261)

Name: NF16895_low_3
Description: NF16895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16895_low_3
NF16895_low_3
[»] chr6 (19 HSPs)
chr6 (166-261)||(393751-393846)
chr6 (8-58)||(28748125-28748175)
chr6 (7-58)||(28041821-28041872)
chr6 (22-58)||(2777350-2777386)
chr6 (7-58)||(5028273-5028324)
chr6 (22-58)||(5327626-5327662)
chr6 (1-53)||(14699665-14699717)
chr6 (22-58)||(15368857-15368893)
chr6 (1-56)||(14693253-14693308)
chr6 (59-87)||(393642-393670)
chr6 (2-58)||(2060636-2060692)
chr6 (22-58)||(2075485-2075521)
chr6 (22-58)||(3610995-3611031)
chr6 (22-58)||(4820252-4820288)
chr6 (22-58)||(15318222-15318258)
chr6 (22-58)||(22341208-22341244)
chr6 (22-58)||(30036828-30036864)
chr6 (2-58)||(32644624-32644680)
chr6 (22-58)||(33421761-33421797)
[»] chr2 (39 HSPs)
chr2 (1-58)||(42678762-42678819)
chr2 (1-58)||(26277108-26277165)
chr2 (7-58)||(6646836-6646887)
chr2 (1-56)||(42372494-42372549)
chr2 (1-58)||(3012847-3012904)
chr2 (7-56)||(32972914-32972963)
chr2 (8-58)||(2971823-2971873)
chr2 (1-59)||(23352906-23352964)
chr2 (1-58)||(40937065-40937122)
chr2 (1-58)||(42866763-42866820)
chr2 (2-58)||(7121391-7121447)
chr2 (7-58)||(10711737-10711788)
chr2 (22-58)||(670501-670537)
chr2 (2-58)||(15141474-15141530)
chr2 (2-58)||(24727427-24727483)
chr2 (22-58)||(29051687-29051723)
chr2 (2-58)||(29795448-29795504)
chr2 (2-58)||(33737336-33737392)
chr2 (22-58)||(37257450-37257486)
chr2 (2-58)||(38600826-38600882)
chr2 (1-56)||(36212060-36212115)
chr2 (8-58)||(285478-285528)
chr2 (12-58)||(6511569-6511615)
chr2 (1-58)||(41586668-41586725)
chr2 (2-58)||(4138188-4138244)
chr2 (26-58)||(5200263-5200295)
chr2 (7-59)||(9377468-9377520)
chr2 (26-58)||(12498674-12498706)
chr2 (22-58)||(18176941-18176977)
chr2 (22-58)||(20911802-20911838)
chr2 (2-58)||(22353178-22353234)
chr2 (2-58)||(25801816-25801872)
chr2 (22-58)||(30977890-30977926)
chr2 (22-58)||(35589421-35589457)
chr2 (22-58)||(36802897-36802933)
chr2 (22-58)||(39449151-39449187)
chr2 (2-58)||(40700208-40700264)
chr2 (2-58)||(43725217-43725273)
chr2 (2-58)||(45202135-45202191)
[»] chr8 (39 HSPs)
chr8 (7-58)||(37657002-37657053)
chr8 (1-58)||(30439507-30439564)
chr8 (1-58)||(41541870-41541927)
chr8 (7-58)||(22706248-22706299)
chr8 (7-58)||(32954853-32954904)
chr8 (2-58)||(7325727-7325783)
chr8 (12-56)||(42885990-42886034)
chr8 (7-58)||(6968240-6968291)
chr8 (7-58)||(39211054-39211105)
chr8 (1-58)||(7586163-7586220)
chr8 (7-56)||(28646686-28646735)
chr8 (7-56)||(28651270-28651319)
chr8 (2-58)||(1370288-1370344)
chr8 (22-58)||(1633924-1633960)
chr8 (22-58)||(16966786-16966822)
chr8 (2-58)||(37392131-37392187)
chr8 (2-58)||(41639802-41639858)
chr8 (11-58)||(35356179-35356226)
chr8 (7-58)||(42569736-42569787)
chr8 (10-64)||(9630130-9630184)
chr8 (2-56)||(14710896-14710950)
chr8 (1-51)||(20174695-20174745)
chr8 (1-51)||(20219422-20219472)
chr8 (1-58)||(5502372-5502429)
chr8 (1-58)||(40413351-40413408)
chr8 (13-58)||(44607702-44607747)
chr8 (22-58)||(3946241-3946277)
chr8 (22-58)||(7592850-7592886)
chr8 (22-58)||(11017806-11017842)
chr8 (8-56)||(11138910-11138958)
chr8 (22-58)||(16872190-16872226)
chr8 (22-58)||(18651371-18651407)
chr8 (22-58)||(29991413-29991449)
chr8 (22-58)||(33589264-33589300)
chr8 (22-58)||(34591263-34591299)
chr8 (22-58)||(34718116-34718152)
chr8 (22-58)||(36110139-36110175)
chr8 (22-58)||(41520969-41521005)
chr8 (2-58)||(45405822-45405878)
[»] chr7 (34 HSPs)
chr7 (1-58)||(7817650-7817707)
chr7 (2-58)||(3937124-3937180)
chr7 (7-58)||(3062343-3062394)
chr7 (7-58)||(11352981-11353032)
chr7 (7-58)||(33224836-33224887)
chr7 (1-58)||(47078252-47078309)
chr7 (22-58)||(29163010-29163046)
chr7 (7-58)||(3293142-3293193)
chr7 (7-58)||(25887595-25887646)
chr7 (22-59)||(19786113-19786150)
chr7 (1-58)||(22330633-22330690)
chr7 (1-58)||(37351992-37352049)
chr7 (2-58)||(6822536-6822592)
chr7 (22-58)||(39331986-39332022)
chr7 (7-58)||(2469704-2469755)
chr7 (7-58)||(27570356-27570407)
chr7 (7-58)||(31711944-31711995)
chr7 (7-58)||(35293129-35293180)
chr7 (8-58)||(8459615-8459665)
chr7 (1-58)||(21347320-21347375)
chr7 (1-51)||(44303934-44303984)
chr7 (1-58)||(26749018-26749074)
chr7 (1-58)||(41985102-41985159)
chr7 (22-58)||(13162920-13162956)
chr7 (22-58)||(13729727-13729763)
chr7 (22-58)||(21023151-21023187)
chr7 (2-58)||(37856168-37856224)
chr7 (22-58)||(37899324-37899360)
chr7 (22-58)||(39231762-39231798)
chr7 (22-58)||(41402508-41402544)
chr7 (2-58)||(41989745-41989800)
chr7 (2-58)||(43213320-43213376)
chr7 (2-58)||(43942650-43942705)
chr7 (2-58)||(45420063-45420119)
[»] chr5 (30 HSPs)
chr5 (1-58)||(9226314-9226371)
chr5 (1-56)||(1839346-1839401)
chr5 (1-58)||(3640198-3640255)
chr5 (8-58)||(15953053-15953103)
chr5 (8-53)||(31284403-31284448)
chr5 (9-58)||(34270340-34270389)
chr5 (22-58)||(4430970-4431006)
chr5 (22-58)||(9977120-9977156)
chr5 (2-58)||(14206401-14206457)
chr5 (22-58)||(23126377-23126413)
chr5 (2-58)||(42267358-42267414)
chr5 (22-58)||(43441739-43441775)
chr5 (7-58)||(372728-372779)
chr5 (7-58)||(6865795-6865846)
chr5 (7-58)||(14923084-14923134)
chr5 (1-56)||(33567225-33567280)
chr5 (1-58)||(2224803-2224860)
chr5 (26-58)||(5042249-5042281)
chr5 (26-58)||(8267858-8267890)
chr5 (22-58)||(8920079-8920115)
chr5 (2-58)||(13734363-13734419)
chr5 (22-58)||(15267785-15267821)
chr5 (2-58)||(16202732-16202788)
chr5 (22-58)||(16594410-16594446)
chr5 (22-58)||(18842355-18842391)
chr5 (22-58)||(21064260-21064296)
chr5 (22-58)||(30640791-30640827)
chr5 (22-58)||(33620609-33620645)
chr5 (2-58)||(33910091-33910147)
chr5 (22-58)||(35099039-35099075)
[»] chr4 (48 HSPs)
chr4 (1-58)||(28657442-28657499)
chr4 (1-58)||(39312617-39312674)
chr4 (1-58)||(43769724-43769781)
chr4 (7-58)||(31657659-31657710)
chr4 (7-58)||(4949519-4949570)
chr4 (1-58)||(5386385-5386442)
chr4 (22-58)||(36111430-36111466)
chr4 (7-58)||(26718381-26718432)
chr4 (7-58)||(26731009-26731060)
chr4 (8-58)||(17683360-17683410)
chr4 (2-59)||(28676155-28676212)
chr4 (22-58)||(14451394-14451430)
chr4 (22-58)||(30079847-30079883)
chr4 (2-58)||(30778267-30778323)
chr4 (2-58)||(39241304-39241360)
chr4 (15-59)||(45143688-45143732)
chr4 (15-59)||(45152457-45152501)
chr4 (2-58)||(46686246-46686301)
chr4 (12-56)||(54802688-54802732)
chr4 (2-58)||(55601703-55601759)
chr4 (7-58)||(17683237-17683288)
chr4 (23-58)||(31076055-31076090)
chr4 (7-58)||(32365675-32365726)
chr4 (7-58)||(32621639-32621690)
chr4 (7-58)||(52846234-52846285)
chr4 (22-56)||(12112633-12112667)
chr4 (8-58)||(54036538-54036588)
chr4 (22-59)||(2401610-2401647)
chr4 (7-56)||(22072263-22072312)
chr4 (7-56)||(29974335-29974384)
chr4 (1-58)||(46173551-46173608)
chr4 (22-58)||(624346-624382)
chr4 (2-58)||(4511826-4511882)
chr4 (22-58)||(5932191-5932227)
chr4 (22-58)||(9362712-9362748)
chr4 (22-58)||(14010152-14010188)
chr4 (22-58)||(22819650-22819686)
chr4 (22-58)||(37514166-37514202)
chr4 (2-58)||(37731927-37731983)
chr4 (2-58)||(39605980-39606035)
chr4 (22-58)||(41486177-41486213)
chr4 (2-58)||(42490921-42490977)
chr4 (22-58)||(42959272-42959308)
chr4 (22-58)||(50273101-50273137)
chr4 (2-58)||(50980603-50980659)
chr4 (22-58)||(51194270-51194306)
chr4 (22-58)||(51887664-51887700)
chr4 (2-58)||(52851341-52851397)
[»] chr3 (45 HSPs)
chr3 (1-58)||(49761320-49761377)
chr3 (1-58)||(54195352-54195409)
chr3 (1-58)||(11234204-11234261)
chr3 (7-58)||(21005183-21005234)
chr3 (7-58)||(47683802-47683853)
chr3 (8-58)||(28430743-28430793)
chr3 (8-58)||(32421637-32421687)
chr3 (8-58)||(51465922-51465972)
chr3 (1-58)||(1337840-1337897)
chr3 (7-56)||(24645371-24645420)
chr3 (1-58)||(26672413-26672469)
chr3 (1-58)||(43169755-43169812)
chr3 (2-58)||(1765405-1765461)
chr3 (22-58)||(10207007-10207043)
chr3 (22-58)||(11633614-11633650)
chr3 (22-58)||(26996317-26996353)
chr3 (2-58)||(28700473-28700529)
chr3 (22-58)||(33976428-33976464)
chr3 (22-58)||(44677518-44677554)
chr3 (22-58)||(49363285-49363321)
chr3 (22-58)||(54773788-54773824)
chr3 (7-58)||(3281723-3281774)
chr3 (7-58)||(23906995-23907046)
chr3 (1-58)||(23868980-23869037)
chr3 (10-47)||(29097564-29097601)
chr3 (1-58)||(39907547-39907604)
chr3 (1-58)||(55361235-55361292)
chr3 (2-58)||(3484771-3484827)
chr3 (22-58)||(8821631-8821667)
chr3 (22-58)||(22371192-22371228)
chr3 (22-58)||(24482997-24483033)
chr3 (22-58)||(28419248-28419284)
chr3 (2-58)||(29057660-29057716)
chr3 (2-58)||(29846894-29846950)
chr3 (22-58)||(30909030-30909066)
chr3 (22-58)||(32767677-32767713)
chr3 (22-58)||(33375861-33375897)
chr3 (22-58)||(37508532-37508568)
chr3 (22-58)||(37927239-37927275)
chr3 (22-58)||(39671132-39671168)
chr3 (7-58)||(42718132-42718184)
chr3 (2-58)||(46952950-46953006)
chr3 (22-58)||(49983385-49983421)
chr3 (22-58)||(50207004-50207040)
chr3 (8-56)||(54260212-54260260)
[»] chr1 (53 HSPs)
chr1 (1-58)||(8200088-8200145)
chr1 (1-58)||(33358160-33358217)
chr1 (1-58)||(44632541-44632598)
chr1 (1-58)||(48220145-48220202)
chr1 (8-56)||(36494478-36494526)
chr1 (7-58)||(45065909-45065960)
chr1 (1-58)||(32319310-32319367)
chr1 (1-58)||(49241506-49241563)
chr1 (7-58)||(18336159-18336210)
chr1 (7-58)||(19969569-19969620)
chr1 (7-58)||(50781577-50781628)
chr1 (2-58)||(40596057-40596113)
chr1 (2-58)||(41507197-41507253)
chr1 (8-58)||(34818053-34818103)
chr1 (22-63)||(756852-756893)
chr1 (1-58)||(6143696-6143753)
chr1 (22-58)||(3603112-3603148)
chr1 (22-58)||(7128119-7128155)
chr1 (22-58)||(8411752-8411788)
chr1 (26-58)||(20565156-20565188)
chr1 (22-58)||(26585913-26585949)
chr1 (22-58)||(26837453-26837489)
chr1 (2-58)||(27687522-27687578)
chr1 (2-58)||(40139127-40139183)
chr1 (22-58)||(46082155-46082191)
chr1 (2-58)||(46903482-46903538)
chr1 (2-58)||(47398454-47398510)
chr1 (2-58)||(49453492-49453548)
chr1 (1-56)||(5477165-5477220)
chr1 (8-58)||(36673739-36673790)
chr1 (7-58)||(50797792-50797843)
chr1 (8-58)||(48103398-48103447)
chr1 (12-58)||(50882122-50882168)
chr1 (22-59)||(30658882-30658919)
chr1 (2-58)||(51718629-51718686)
chr1 (22-58)||(902639-902675)
chr1 (22-58)||(1852985-1853021)
chr1 (22-58)||(4470348-4470384)
chr1 (2-58)||(5975549-5975605)
chr1 (2-58)||(14983785-14983841)
chr1 (2-58)||(15466759-15466815)
chr1 (2-58)||(16836118-16836174)
chr1 (22-58)||(33024605-33024641)
chr1 (22-58)||(35136845-35136881)
chr1 (22-58)||(36577446-36577482)
chr1 (2-58)||(42539419-42539475)
chr1 (2-58)||(43757600-43757656)
chr1 (22-58)||(43893258-43893294)
chr1 (22-58)||(44789177-44789213)
chr1 (2-58)||(45272163-45272219)
chr1 (2-58)||(48325781-48325837)
chr1 (1-58)||(48624885-48624946)
chr1 (22-58)||(52714935-52714971)
[»] scaffold0100 (1 HSPs)
scaffold0100 (10-58)||(44787-44835)
[»] scaffold0321 (1 HSPs)
scaffold0321 (22-58)||(19637-19673)
[»] scaffold0054 (1 HSPs)
scaffold0054 (2-58)||(31603-31659)
[»] scaffold0471 (1 HSPs)
scaffold0471 (22-58)||(8-44)


Alignment Details
Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 393751 - 393846
Alignment:
Q  166 ctaattaagctatgtttgataagagatattcatttgcacttataacttatcacatgagtgacatgactaaaaaatactcatttgataattatcatt 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  393751 ctaattaagctatgtttgataagagatattcatttgcacttataacttatcacatgagtgacatgactaaaaaatactcatttgataattatcatt 393846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 28748175 - 28748125
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  28748175 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 28748125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 28041821 - 28041872
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  28041821 gtgagtatgagagaaaaagttgttaccaaatggatgtttaaatatcatttct 28041872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 2777350 - 2777386
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  2777350 aaagttgttactaaatggatgttcaaatatcatttct 2777386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 5028273 - 5028324
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| || ||||||||||| |||||||||||||    
T  5028273 gtgagtataagagagaaagttgtcacaaaatggatgtttaaatatcatttct 5028324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5327626 - 5327662
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5327626 aaagttgtcactaaatggatgttcaaatatcatttct 5327662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14699665 - 14699717
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatca 53  Q
    ||||| |||||||||||| |||||||| | || ||||||||||||||||||||    
T  14699665 aataatgtgagtatgagaaagaaagttatcacaaaatggatgttcaaatatca 14699717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 15368857 - 15368893
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||| |||||||||||||||||||||||||    
T  15368857 aaagttgttacaaaatggatgttcaaatatcatttct 15368893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14693253 - 14693308
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||| |||||||| | |||||||||| | || |||||||||||||||||||||||    
T  14693253 aataatgtgagtatcaaagagaaagttatcacaaaatggatgttcaaatatcattt 14693308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 393642 - 393670
Alignment:
Q  59 agttaatcaatcttgtgaatgtattaatt 87  Q
    |||||||||||||||||||||||||||||    
T  393642 agttaatcaatcttgtgaatgtattaatt 393670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 2060636 - 2060692
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| |||||||| |  |||||| | ||||||||||||||||    
T  2060636 ataatgtgagtatgagagaaaaagttgtcataaaatggttattcaaatatcatttct 2060692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 2075485 - 2075521
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  2075485 aaagctgtcactaaatggatgttcaaatatcatttct 2075521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 3610995 - 3611031
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  3610995 aaagttatcactaaatggatgttcaaatatcatttct 3611031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 4820288 - 4820252
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  4820288 aaagttatcactaaatggatgttcaaatatcatttct 4820252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 15318222 - 15318258
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  15318222 aaagttgtcacaaaatggatgttcaaatatcatttct 15318258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 22341208 - 22341244
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  22341208 aaagttgttaccaaatggatgttcaaatattatttct 22341244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30036828 - 30036864
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  30036828 aaagttgtcactaaatagatgttcaaatatcatttct 30036864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 32644680 - 32644624
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||| | ||| ||||||||||||||    
T  32644680 ataatgtgagtatgagagagaaagttgtcaaaaaatagttgtacaaatatcatttct 32644624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33421797 - 33421761
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  33421797 aaagttgtcacaaaatggatgttcaaatatcatttct 33421761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42678819 - 42678762
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42678819 aataatgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttct 42678762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26277165 - 26277108
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  26277165 aataatgtgagtataagagagaaagttgtcactaaatggatgttcaaatatcatttct 26277108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 6646887 - 6646836
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  6646887 gtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 6646836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42372549 - 42372494
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  42372549 aataatgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcattt 42372494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3012847 - 3012904
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| || |||||||||||||||||||| || |||||||||||||||||||||||||    
T  3012847 aataatgtaagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 3012904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 32972914 - 32972963
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  32972914 gtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 32972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 2971823 - 2971873
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  2971823 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcttttct 2971873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23352906 - 23352964
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    ||||| ||||||||||||||||||||||| || |||||| ||||||| |||||||||||    
T  23352906 aataatgtgagtatgagagagaaagttgtcacaaaatggctgttcaagtatcatttcta 23352964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40937065 - 40937122
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||| | || |||||||||||||||| ||||||||    
T  40937065 aataatgtgagtatgagagagaaagttatcacaaaatggatgttcaaatgtcatttct 40937122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42866820 - 42866763
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||||||||| |||||||| || ||||||| |||||||||||||||||    
T  42866820 aataatgtgagtatgagagaaaaagttgtcacaaaatggacgttcaaatatcatttct 42866763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7121447 - 7121391
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||||| |||||| | | ||||||||||||||    
T  7121447 ataatgtgagtatgagagagaaagttgttacaaaatggttatacaaatatcatttct 7121391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 10711788 - 10711737
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||| |||| || |||| ||||||||||||||||||||    
T  10711788 gtgagtatgagagagaaaattgtcacaaaatagatgttcaaatatcatttct 10711737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 670501 - 670537
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  670501 aaagttgtcactaaatggatgttcaaatatcatttct 670537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 15141530 - 15141474
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||| ||||| ||||||||||||||    
T  15141530 ataatgtgagtatgagagagaaagttgtcataaaatagatgtacaaatatcatttct 15141474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 24727483 - 24727427
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||  | |||||| ||| ||||||||||||||    
T  24727483 ataatgtgagtatgagagagaaagttgtaccaaaatggttgtacaaatatcatttct 24727427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 29051687 - 29051723
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  29051687 aaagttgtcactaaatggatgttcaaatatcatttct 29051723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 29795504 - 29795448
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||| ||||||||||||| || |||||| ||| ||||||||||||||    
T  29795504 ataatgtgagtatgtgagagaaagttgtcacaaaatggttgtacaaatatcatttct 29795448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 33737336 - 33737392
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||| |||| || ||||||  |||||||||||||||||    
T  33737336 ataacgtgagtatgagagagaaatttgtcacaaaatggtagttcaaatatcatttct 33737392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 37257486 - 37257450
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  37257486 aaagttgtcactaaatggatgttcaaatatcatttct 37257450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 38600882 - 38600826
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||||||| || |||||||||||    
T  38600882 ataatgtgagtatgagagagaaagttgtcaaaaaatggatgtacatatatcatttct 38600826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36212060 - 36212115
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||| |||||||||| ||| |||||||| || ||||||||||||| |||||||||    
T  36212060 aataatgtgagtatgaaagataaagttgtcacaaaatggatgttcagatatcattt 36212115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 285478 - 285528
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| | ||||| |||| ||||||||||||||    
T  285478 tgagtatgcgagagaaagttgttccaaaatgaatgtacaaatatcatttct 285528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 6511569 - 6511615
Alignment:
Q  12 tatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||| |||| || |||||||||| ||||||||||||||    
T  6511569 tatgagagagaaaattgtcacaaaatggatgtccaaatatcatttct 6511615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41586668 - 41586725
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||| |||||||||||||||| || |||||||| || |||| ||||||||    
T  41586668 aataatgtgagtgtgagagagaaagttgtaacaaaatggatatttaaatgtcatttct 41586725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 4138188 - 4138244
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||||  |||| | | | ||||||||||||||    
T  4138188 ataatgtgagtatgagagagaaagttgttagaaaatagttatacaaatatcatttct 4138244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 5200263 - 5200295
Alignment:
Q  26 ttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||||||| |||||    
T  5200263 ttgttactaaatggatgttcaaatatcctttct 5200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 9377520 - 9377468
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    |||| |||||||||||||||| | || ||||||| |||| |||||||||||||    
T  9377520 gtgaatatgagagagaaagttatcacaaaatggacgttcgaatatcatttcta 9377468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 12498674 - 12498706
Alignment:
Q  26 ttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||| |||||||||||||||||||||||||    
T  12498674 ttgttaccaaatggatgttcaaatatcatttct 12498706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 18176977 - 18176941
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  18176977 aaagttgtcactaaatagatgttcaaatatcatttct 18176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 20911838 - 20911802
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  20911838 aaagttgttaccaaatgaatgttcaaatatcatttct 20911802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 22353178 - 22353234
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||| |||||||||| || |||||  ||| ||||||||||||||    
T  22353178 ataatgtgagtatgagaaagaaagttgtcacaaaatgattgtacaaatatcatttct 22353234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 25801816 - 25801872
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| |||||||| || || ||| ||| ||||||||||||||    
T  25801816 ataatgtgagtatgagagataaagttgtcacaaattggttgtacaaatatcatttct 25801872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30977926 - 30977890
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  30977926 aaagttgtcacaaaatggatgttcaaatatcatttct 30977890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 35589421 - 35589457
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  35589421 aaagttgtcacaaaatggatgttcaaatatcatttct 35589457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 36802933 - 36802897
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  36802933 aaagttgtcacaaaatggatgttcaaatatcatttct 36802897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39449151 - 39449187
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  39449151 aaagttgtcacaaaatggatgttcaaatatcatttct 39449187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40700264 - 40700208
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||||  |||| | ||| |||||| |||||||    
T  40700264 ataatgtgagtatgagagagaaagttgttataaaatagttgtacaaataccatttct 40700208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 43725273 - 43725217
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  || | ||||| ||||||||||||||    
T  43725273 ataatgtgagtatgagagagaaagttgtcataaagtagatgtacaaatatcatttct 43725217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 45202135 - 45202191
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||| |||||||||||||||||| |  |||||| ||| ||||||||||||||    
T  45202135 ataatgtgaatatgagagagaaagttgtaaaaaaatggttgtacaaatatcatttct 45202191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 37657053 - 37657002
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37657053 gtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttct 37657002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30439507 - 30439564
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  30439507 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 30439564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41541927 - 41541870
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  41541927 aataatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttct 41541870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 22706248 - 22706299
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  22706248 gtgagtatgagagataaagttgtcactaaatggatattcaaatatcatttct 22706299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 32954904 - 32954853
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  32954904 gtgagtatcagagagaaagttgtcacaaaatggatgttcaaatatcatttct 32954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7325783 - 7325727
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||||  || ||||||| ||||||||||||||    
T  7325783 ataatgtgagtatgagagagaaagttgttataaagtggatgtacaaatatcatttct 7325727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 42886034 - 42885990
Alignment:
Q  12 tatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  42886034 tatgagagagaaagttgtcaccaaatggatgttcaaatatcattt 42885990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 6968240 - 6968291
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || | || ||||||||||||||||||||    
T  6968240 gtgagtatgagagagaaagttgtcaccagattgatgttcaaatatcatttct 6968291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 39211105 - 39211054
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| |  |||||| ||||||||||||||||||    
T  39211105 gtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7586163 - 7586220
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||||| | |||||||||| || |||| ||||||||||||||||||||    
T  7586163 aataatgtgagtatgaaaaagaaagttgtcaccaaatagatgttcaaatatcatttct 7586220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 28646735 - 28646686
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||||||    
T  28646735 gtgagtatgagagagaaagttgtcatcaaatagatgttcaaatatcattt 28646686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 28651319 - 28651270
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||||||    
T  28651319 gtgagtatgagagagaaagttgtcatcaaatagatgttcaaatatcattt 28651270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 1370288 - 1370344
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||| |||||||||||||||| || ||| ||| ||||||||||||||    
T  1370288 ataatgtgagtatgtgagagaaagttgttacaaagtggttgtacaaatatcatttct 1370344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1633924 - 1633960
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1633924 aaagttgtcactaaatggatgttcaaatatcatttct 1633960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 16966822 - 16966786
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  16966822 aaagttgtcactaaatggatgttcaaatatcatttct 16966786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 37392131 - 37392187
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| ||| ||||||||||||||    
T  37392131 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttct 37392187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 41639802 - 41639858
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| ||| ||||||  |||||||||| ||||||||||||||    
T  41639802 ataatgtgagtatgagagaaaaaattgttagaaaatggatgtacaaatatcatttct 41639858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 35356179 - 35356226
Alignment:
Q  11 gtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||| | || ||||| |||||||||||||||||||    
T  35356179 gtatgagagagaaagttatcacaaaatgaatgttcaaatatcatttct 35356226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 42569736 - 42569787
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||| |  ||||| |||||||||||||||||||    
T  42569736 gtgaatatgagagagaaagttgtcataaaatgaatgttcaaatatcatttct 42569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 9630184 - 9630130
Alignment:
Q  10 agtatgagagagaaagttgttactaaatggatgttcaaatatcatttctagttaa 64  Q
    ||||||| ||||||||||||||  |||||  ||||||||||||||||||| ||||    
T  9630184 agtatgaaagagaaagttgttaaaaaatgattgttcaaatatcatttctatttaa 9630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 14710896 - 14710950
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||| ||||||||||||||||||||||| || |||||  ||| ||||||||||||    
T  14710896 ataatgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcattt 14710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20174745 - 20174695
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatat 51  Q
    ||||| |||||||||||| | |||||||| || ||||||||||||||||||    
T  20174745 aataatgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatat 20174695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20219472 - 20219422
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatat 51  Q
    ||||| |||||||||||| | |||||||| || ||||||||||||||||||    
T  20219472 aataatgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatat 20219422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5502429 - 5502372
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||| |||||||||||||||||| || || ||| ||| ||||||||||||||    
T  5502429 aataatgtgaatatgagagagaaagttgtcacaaagtggttgtacaaatatcatttct 5502372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40413351 - 40413408
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || ||||   ||| ||||||||||||||    
T  40413351 aataacgtgagtatgagagagaaagttgtcacaaaataattgtacaaatatcatttct 40413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 44607747 - 44607702
Alignment:
Q  13 atgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||| || |||||| ||| ||||||||||||||    
T  44607747 atgagagagaaagttgtcaccaaatggttgtacaaatatcatttct 44607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 3946277 - 3946241
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  3946277 aaagttgtcacaaaatggatgttcaaatatcatttct 3946241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7592886 - 7592850
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||| |||||||||||||||||||    
T  7592886 aaagttgtcactaaatgaatgttcaaatatcatttct 7592850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11017842 - 11017806
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| | ||||||||||||||||||||||||||    
T  11017842 aaagttgtcattaaatggatgttcaaatatcatttct 11017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 11138958 - 11138910
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||||||||||||||||||||| || |||| | ||| ||||||||||||    
T  11138958 tgagtatgagagagaaagttgtcacaaaatagttgtacaaatatcattt 11138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 16872190 - 16872226
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  16872190 aaagttgtcacaaaatggatgttcaaatatcatttct 16872226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 18651407 - 18651371
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  18651407 aaagttgttaccaaatagatgttcaaatatcatttct 18651371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29991449 - 29991413
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  29991449 aaagttgtcacaaaatggatgttcaaatatcatttct 29991413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 33589264 - 33589300
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| |||||||||||||    
T  33589264 aaagttgtcactaaatggatgttgaaatatcatttct 33589300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34591299 - 34591263
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||| |||||||||||||||||||    
T  34591299 aaagttgtgactaaatgaatgttcaaatatcatttct 34591263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34718152 - 34718116
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  34718152 aaagttgtcacaaaatggatgttcaaatatcatttct 34718116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 36110175 - 36110139
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  36110175 aaagttttcactaaatggatgttcaaatatcatttct 36110139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 41521005 - 41520969
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  41521005 aaagttatcactaaatggatgttcaaatatcatttct 41520969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 45405822 - 45405878
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| ||||||||  | |||||| ||| ||||||||||||||    
T  45405822 ataatgtgagtatgagagaaaaagttgtatcaaaatggttgtacaaatatcatttct 45405878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7817707 - 7817650
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  7817707 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 7817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 3937124 - 3937180
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  3937124 ataatgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttct 3937180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 3062394 - 3062343
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  3062394 gtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 11352981 - 11353032
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  11352981 gtgagtatgagagagaaagttgtcacaaaattgatgttcaaatatcatttct 11353032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 33224887 - 33224836
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  33224887 gtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttct 33224836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47078252 - 47078309
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| |  |||| ||||||||||||||||||||    
T  47078252 aataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcatttct 47078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 29163010 - 29163046
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  29163010 aaagttgttactaaatggatgttcaaatatcatttct 29163046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 3293193 - 3293142
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||| || ||||| |||||||||||||||||||    
T  3293193 gtgaatatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttct 3293142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 25887646 - 25887595
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || || ||||||| ||||||||||||||    
T  25887646 gtgagtatgagagagaaagttgtcacaaagtggatgtacaaatatcatttct 25887595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 19786113 - 19786150
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19786113 aaagttgtcactaaatggatgttcaaatatcatttcta 19786150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22330633 - 22330690
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || || ||| ||| ||||||||||||||    
T  22330633 aataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttct 22330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37351992 - 37352049
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || || ||| ||| ||||||||||||||    
T  37351992 aataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttct 37352049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6822536 - 6822592
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| ||||||||||  |||||| ||| ||||||||||||||    
T  6822536 ataatgtgagtatgagagaaaaagttgttagaaaatggttgtacaaatatcatttct 6822592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 39332022 - 39331986
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  39332022 aaagttgtcactaaatggatgttcaaatatcatttct 39331986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 2469755 - 2469704
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || || ||| ||| ||||||||||||||    
T  2469755 gtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttct 2469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 27570407 - 27570356
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||| |||  |||| | ||||||||||||||||||    
T  27570407 gtgagtatgagagagaaagttattaaaaaatagttgttcaaatatcatttct 27570356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 31711944 - 31711995
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||| |||||||||| || ||||| || ||||||||||||||||    
T  31711944 gtgagtatgagaaagaaagttgtcacaaaatgaatattcaaatatcatttct 31711995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 35293180 - 35293129
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||| |||||||||| |  |||||||||||||||||||||||||    
T  35293180 gtgagtataagaaagaaagttgtcaaaaaatggatgttcaaatatcatttct 35293129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 8459665 - 8459615
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||||  || ||| ||| ||||||||||||||    
T  8459665 tgagtatgagagagaaagttgttaaaaagtggttgtacaaatatcatttct 8459615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21347320 - 21347375
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||  ||||||||| || |||||||| ||||||||||||||||    
T  21347320 aataatgtgagtatgaga--gaaagttgtcacaaaatggatcttcaaatatcatttct 21347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44303984 - 44303934
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatat 51  Q
    ||||| |||||||||||| | |||||||| || ||||||||||||||||||    
T  44303984 aataatgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatat 44303934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26749074 - 26749018
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| |  |||| | ||||||||||||||||||    
T  26749074 aataaagtgagtatgagagagaaagttgtca-aaaattgttgttcaaatatcatttct 26749018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41985102 - 41985159
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || || ||  ||| ||||||||||||||    
T  41985102 aataatgtgagtatgagagagaaagttgtcacaaattgattgtacaaatatcatttct 41985159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 13162956 - 13162920
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  13162956 aaagttgtcactaaatagatgttcaaatatcatttct 13162920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 13729763 - 13729727
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  13729763 aaagttgtcacaaaatggatgttcaaatatcatttct 13729727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 21023151 - 21023187
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||| |||||||||||||||||||    
T  21023151 aaagttgtcactaaatgaatgttcaaatatcatttct 21023187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 37856168 - 37856224
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||| |||| |||||||| || |||||| ||| ||||||||||||||    
T  37856168 ataatgtgagtatgtgagataaagttgtcacaaaatggttgtacaaatatcatttct 37856224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 37899360 - 37899324
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  37899360 aaagttgtcacaaaatggatgttcaaatatcatttct 37899324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39231762 - 39231798
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  39231762 aaagttgtcactaactggatgttcaaatatcatttct 39231798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 41402544 - 41402508
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  41402544 aaagttgtcactaaatggatattcaaatatcatttct 41402508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 41989745 - 41989800
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||| ||  |||||| |||| |||||||||||||    
T  41989745 ataatgtgagtatgagagagaaagttg-taaaaaatggttgttaaaatatcatttct 41989800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 43213376 - 43213320
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||| ||||||  || ||| ||| ||||||||||||||    
T  43213376 ataatgtgagtatgagagagaaaattgttagaaagtggttgtacaaatatcatttct 43213320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 43942705 - 43942650
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||| ||  |||| | ||||||||||||||||||    
T  43942705 ataatgtgagtatgagagagaaagttg-taaaaaatagttgttcaaatatcatttct 43942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 45420063 - 45420119
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||| |||||||||||||||||| |  |||| | ||||||||||||||||||    
T  45420063 ataatgtgaatatgagagagaaagttgtcaaaaaatagttgttcaaatatcatttct 45420119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9226371 - 9226314
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  9226371 aataatgtgagtatgagagagaaagttgtcattaaatggatgttcaaatatcatttct 9226314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1839346 - 1839401
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  1839346 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3640198 - 3640255
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||||||||||||||||||  | |||| ||||||||||||||||||||    
T  3640198 aataatgtgagtatgagagagaaagttgtctcaaaatagatgttcaaatatcatttct 3640255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 15953053 - 15953103
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||| |||||||| || |||| ||||||||||||||||||||    
T  15953053 tgagtatgagagaaaaagttgtcacaaaatagatgttcaaatatcatttct 15953103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 31284403 - 31284448
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatca 53  Q
    |||||||||||||||||||||| || |||||||||| |||||||||    
T  31284403 tgagtatgagagagaaagttgtcacaaaatggatgtacaaatatca 31284448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 34270389 - 34270340
Alignment:
Q  9 gagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||| |||| || || ||||||||||||||||||||||    
T  34270389 gagtatgagagagaaaattgtcacaaagtggatgttcaaatatcatttct 34270340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4430970 - 4431006
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  4430970 aaagttgtcactaaatggatgttcaaatatcatttct 4431006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9977156 - 9977120
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  9977156 aaagttgtcactaaatggatgttcaaatatcatttct 9977120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 14206457 - 14206401
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| ||| ||||||||||||||    
T  14206457 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttct 14206401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 23126377 - 23126413
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  23126377 aaagttgtcactaaatggatgttcaaatatcatttct 23126413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 42267414 - 42267358
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||| |||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  42267414 ataatgtgtgtatgagagaaaaagttgtcactaaatgaatgatcaaatatcatttct 42267358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 43441775 - 43441739
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||| |||||||||||||||||||||||||    
T  43441775 aaagttgttacaaaatggatgttcaaatatcatttct 43441739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 372728 - 372779
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||||| ||| |||| |||||||||    
T  372728 gtgagtatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttct 372779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 6865795 - 6865846
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || || ||| ||| ||||||||||||||    
T  6865795 gtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttct 6865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 14923134 - 14923084
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  14923134 gtgagtatgagagagaaagttg-taaaaaatggttgttcaaatatcatttct 14923084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33567225 - 33567280
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||| ||||||||||||||||||||||| || || ||| ||| ||||||||||||    
T  33567225 aataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 33567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2224860 - 2224803
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| || ||||||||||| ||| |||| || |||| ||||||||||||||||||||    
T  2224860 aataatgtaagtatgagagataaaattgtcaccaaatagatgttcaaatatcatttct 2224803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 5042281 - 5042249
Alignment:
Q  26 ttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||||||||    
T  5042281 ttgtcactaaatggatgttcaaatatcatttct 5042249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 8267858 - 8267890
Alignment:
Q  26 ttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||||||||    
T  8267858 ttgtcactaaatggatgttcaaatatcatttct 8267890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8920115 - 8920079
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  8920115 aaagttgtcacaaaatggatgttcaaatatcatttct 8920079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13734363 - 13734419
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  || ||| ||| ||||||||||||||    
T  13734363 ataatgtgagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttct 13734419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 15267821 - 15267785
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| |||||||||||||    
T  15267821 aaagttgtcactaaatggatgttaaaatatcatttct 15267785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 16202788 - 16202732
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| || |||| | ||| || |||||||||||    
T  16202788 ataatgtgagtatgagagagaaagttgtcacaaaataggtgtacatatatcatttct 16202732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 16594410 - 16594446
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||  |||||||||||||||||||||||||    
T  16594410 aaagttgttaaaaaatggatgttcaaatatcatttct 16594446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 18842355 - 18842391
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  18842355 aaagttatcactaaatggatgttcaaatatcatttct 18842391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 21064260 - 21064296
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||| |||||||||||||||||||    
T  21064260 aaagttgtcactaaatgaatgttcaaatatcatttct 21064296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30640827 - 30640791
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  30640827 aaagttgtcacaaaatggatgttcaaatatcatttct 30640791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33620645 - 33620609
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  33620645 aaagttgtcactaaatggatattcaaatatcatttct 33620609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 33910091 - 33910147
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| ||  ||||||||||||||    
T  33910091 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgaacaaatatcatttct 33910147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 35099039 - 35099075
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  35099039 aaagttgtcactaaatagatgttcaaatatcatttct 35099075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28657442 - 28657499
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  28657442 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 28657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39312617 - 39312674
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  39312617 aataatgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcatttct 39312674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43769781 - 43769724
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  43769781 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 43769724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 31657710 - 31657659
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  31657710 gtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 31657659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 4949570 - 4949519
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||    
T  4949570 gtgagtatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttct 4949519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5386442 - 5386385
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| |  |||||| ||||||||||||||||||    
T  5386442 aataatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 36111430 - 36111466
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  36111430 aaagttgttactaaatggatgttcaaatatcatttct 36111466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 26718432 - 26718381
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||| |||| |  |||||||||||||||||||||||||    
T  26718432 gtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttct 26718381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 26731060 - 26731009
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||| |||| |  |||||||||||||||||||||||||    
T  26731060 gtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttct 26731009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17683410 - 17683360
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||||||    
T  17683410 tgagtatgagagataaagttgtcataaaatggatgttcaaatatcatttct 17683360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 28676155 - 28676212
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    |||| |||||||||| |||||||||||| || |||||| ||| |||||||||||||||    
T  28676155 ataatgtgagtatgaaagagaaagttgtcacaaaatggttgtacaaatatcatttcta 28676212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14451430 - 14451394
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  14451430 aaagttgtcactaaatggatgttcaaatatcatttct 14451394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30079883 - 30079847
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  30079883 aaagttgtcactaaatggatgttcaaatatcatttct 30079847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 30778267 - 30778323
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| || || ||| ||| ||||||||||||||    
T  30778267 ataatgtgagtatgagagagaaagttgtcacaaattggctgtacaaatatcatttct 30778323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 39241304 - 39241360
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| || || ||| ||| ||||||||||||||    
T  39241304 ataatgtgagtatgagagagaaagttgtcacaaattggttgtacaaatatcatttct 39241360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 45143688 - 45143732
Alignment:
Q  15 gagagagaaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||    
T  45143688 gagagagaaagttgtcataaaatggatgttcaaatatcatttcta 45143732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 45152457 - 45152501
Alignment:
Q  15 gagagagaaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||    
T  45152457 gagagagaaagttgtcataaaatggatgttcaaatatcatttcta 45152501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 46686301 - 46686246
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||| ||| |||||| ||| ||||||||||||||    
T  46686301 ataatgtgagtatgagagagaaagttg-tacaaaatggttgtacaaatatcatttct 46686246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 54802688 - 54802732
Alignment:
Q  12 tatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||| ||||||||||||| || |||||||||||||||||||||||    
T  54802688 tatgtgagagaaagttgtcacaaaatggatgttcaaatatcattt 54802732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 55601703 - 55601759
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||| |||||||||||||| |||||    
T  55601703 ataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcttttct 55601759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 17683288 - 17683237
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| |  ||||| |||||||||||||||||||    
T  17683288 gtgagtataagagagaaagttgtcataaaatgaatgttcaaatatcatttct 17683237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 31076090 - 31076055
Alignment:
Q  23 aagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||| |||||||||||||||||||||||||    
T  31076090 aagttgttaccaaatggatgttcaaatatcatttct 31076055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 32365675 - 32365726
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||| || |||||| ||| ||||||||||||||    
T  32365675 gtgaatatgagagagaaagttgtcacaaaatggttgtacaaatatcatttct 32365726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 32621690 - 32621639
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| || |||||| ||| ||||||||||||||    
T  32621690 gtgagtattagagagaaagttgtcacaaaatggttgtgcaaatatcatttct 32621639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 52846234 - 52846285
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| |  |||| |||||| |||||||||||||    
T  52846234 gtgagtatgagagagaaagttgtcataaaatagatgtttaaatatcatttct 52846285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 12112667 - 12112633
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||||||| ||||||||||||||||||||||||||    
T  12112667 aaagttgtcactaaatggatgttcaaatatcattt 12112633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 54036538 - 54036588
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||| |||||||| || |||||| ||| ||||||||||||||    
T  54036538 tgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttct 54036588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 2401647 - 2401610
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    |||||||| || ||||||||||||||||||||||||||    
T  2401647 aaagttgtcacaaaatggatgttcaaatatcatttcta 2401610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 22072312 - 22072263
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||||||||||||| |||||||| || |||||  ||||||||||||||||    
T  22072312 gtgagtatgagagaaaaagttgtaacaaaatgattgttcaaatatcattt 22072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 29974335 - 29974384
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||||||||| |||||||||||| || |||| | ||||||||||||||||    
T  29974335 gtgagtatgaaagagaaagttgtcacaaaatagttgttcaaatatcattt 29974384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46173608 - 46173551
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||| ||||||||||||||| || || ||| ||| ||||||||||||||    
T  46173608 aataatgtgagtacgagagagaaagttgtcacaaagtggttgtacaaatatcatttct 46173551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 624346 - 624382
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  624346 aaagttgtcactaaatagatgttcaaatatcatttct 624382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4511882 - 4511826
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| | | ||||||||||||||    
T  4511882 ataatgtgagtatgagagagaaagttgtcataaaatggttatacaaatatcatttct 4511826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5932191 - 5932227
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| |||||||||||||    
T  5932191 aaagttgtcactaaatggatgtttaaatatcatttct 5932227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9362712 - 9362748
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| | ||||||||||||||||||||||||||    
T  9362712 aaagttgtcattaaatggatgttcaaatatcatttct 9362748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 14010152 - 14010188
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  14010152 aaagttgtcacaaaatggatgttcaaatatcatttct 14010188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 22819686 - 22819650
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  22819686 aaagttgtcacaaaatggatgttcaaatatcatttct 22819650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37514166 - 37514202
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  37514166 aaagttgttacaaaatggatgtacaaatatcatttct 37514202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37731983 - 37731927
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||  | |||||  ||| ||||||||||||||    
T  37731983 ataatgtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttct 37731927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 39606035 - 39605980
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| |||||| |||||||||||    
T  39606035 ataatgtgagtatgagagagaaagttgtca-aaaatggttgttcatatatcatttct 39605980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 41486177 - 41486213
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  41486177 aaagttatcactaaatggatgttcaaatatcatttct 41486213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 42490977 - 42490921
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  || ||| ||| ||||||||||||||    
T  42490977 ataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttct 42490921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 42959308 - 42959272
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||  ||||||||||||||||||||||||||||    
T  42959308 aaagttgccactaaatggatgttcaaatatcatttct 42959272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 50273101 - 50273137
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| | ||||||||||||||||||||||||||    
T  50273101 aaagttgtcattaaatggatgttcaaatatcatttct 50273137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 50980659 - 50980603
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||| |||||||  |||||  ||| ||||||||||||||    
T  50980659 ataatgtgagtatgagagagaaggttgttagaaaatgattgtacaaatatcatttct 50980603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 51194306 - 51194270
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  51194306 aaagttgtcactaaatggatgttcaaatattatttct 51194270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 51887700 - 51887664
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  51887700 aaagttgtcacaaaatggatgttcaaatatcatttct 51887664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 52851397 - 52851341
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||| ||||||||||||| |  |||||| ||| ||||||||||||||    
T  52851397 ataatgtgagtatgtgagagaaagttgtcatgaaatggttgtgcaaatatcatttct 52851341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49761377 - 49761320
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  49761377 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 49761320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 54195409 - 54195352
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  54195409 aataatgtgagtataaaagagaaagttgtcactaaatggatgttcaaatatcatttct 54195352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11234261 - 11234204
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||||    
T  11234261 aataacgtgagaatgagagaaaaagttgtcagtaaatggatgttcaaatatcatttct 11234204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 21005183 - 21005234
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| || |||| ||||||||||||||||||||    
T  21005183 gtgagtataagagagaaagttgtcacaaaatagatgttcaaatatcatttct 21005234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 47683853 - 47683802
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||||| ||| ||||||||||||||    
T  47683853 gtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttct 47683802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 28430793 - 28430743
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||| ||||||||||||||  |||||||||||||||||| ||||||    
T  28430793 tgagtatgatagagaaagttgttatcaaatggatgttcaaatattatttct 28430743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 32421637 - 32421687
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  32421637 tgagtatgagagagaaagttattatcaaatagatgttcaaatatcatttct 32421687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 51465922 - 51465972
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||| || || |||| ||||||||||||||||||||    
T  51465922 tgagtatgagagagaaagtggtcacaaaatagatgttcaaatatcatttct 51465972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1337840 - 1337897
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||||||| ||||| |||| |  |||||||||||||||||||||||||    
T  1337840 aataatgtgagtatgagatagaaaattgtcataaaatggatgttcaaatatcatttct 1337897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 24645420 - 24645371
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||||||||||||| |||||||| |  |||||||||||||||||||||||    
T  24645420 gtgagtatgagagaaaaagttgtcataaaatggatgttcaaatatcattt 24645371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26672469 - 26672413
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||| ||||| || ||||| |||||||||||||||||||    
T  26672469 aataatgtgagtatgagagagaa-gttgtcacaaaatgaatgttcaaatatcatttct 26672413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43169755 - 43169812
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||||||||| |||||||| || |||||| ||| ||||||||||||||    
T  43169755 aataatgtgagtatgagagaaaaagttgtcacaaaatggttgtacaaatatcatttct 43169812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1765461 - 1765405
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||| ||||||||||||||||||| || ||||| |||| ||||||||||||||    
T  1765461 ataatgtgcgtatgagagagaaagttgtcacaaaatgaatgtacaaatatcatttct 1765405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 10207007 - 10207043
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  10207007 aaagttgtcactaaatggatgttcaaatatcatttct 10207043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11633650 - 11633614
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||| |||||||||||||||||||||||||||    
T  11633650 aaagttgttgctaaatggatgttcaaatatcatttct 11633614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 26996353 - 26996317
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  26996353 aaagttgttactaaatgaatgttcaaatatcatttct 26996317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 28700529 - 28700473
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| |||||||| |  |||||| ||||||||||||||||||    
T  28700529 ataatgtgagtatgagagataaagttgtcaaaaaatggttgttcaaatatcatttct 28700473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 33976428 - 33976464
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33976428 aaagttgttacaaaatggatgttcaaatatcatttct 33976464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 44677518 - 44677554
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  44677518 aaagttgtcactaaatggatgttcaaatatcatttct 44677554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 49363285 - 49363321
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  49363285 aaagttgtcactaaatggatgttcaaatatcatttct 49363321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 54773788 - 54773824
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  54773788 aaagttgtcactaaatggatgttcaaatatcatttct 54773824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 3281723 - 3281774
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| || ||||  |||||||||||||||||||    
T  3281723 gtgagtataagagagaaagttgtcacaaaataaatgttcaaatatcatttct 3281774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 23906995 - 23907046
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| ||  ||||| ||| ||||||||||||||    
T  23906995 gtgagtatgagagagaaagttgtaacataatggttgtacaaatatcatttct 23907046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23868980 - 23869037
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||||| ||||||| ||||||  |||||| ||| ||||||||||||||    
T  23868980 aataatgtgagtatgaaagagaaaattgttataaaatggttgtacaaatatcatttct 23869037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 29097564 - 29097601
Alignment:
Q  10 agtatgagagagaaagttgttactaaatggatgttcaa 47  Q
    |||||||||||||||||||| || ||||||||||||||    
T  29097564 agtatgagagagaaagttgtcacaaaatggatgttcaa 29097601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39907547 - 39907604
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||||||||| |||||| | | |||||  |||||||||||||||||||    
T  39907547 aataatgtgagtatgagagaaaaagttatcattaaataaatgttcaaatatcatttct 39907604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 55361235 - 55361292
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||| |||||||||||||| |  |||||| ||| ||||||||||||||    
T  55361235 aataatgtgagtataagagagaaagttgtcaagaaatggttgtacaaatatcatttct 55361292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 3484827 - 3484771
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| ||  ||||||||||||||    
T  3484827 ataatgtgagtatgagagagaaagttgtaataaaatggttggacaaatatcatttct 3484771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8821667 - 8821631
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  8821667 aaagttgtcactaaatagatgttcaaatatcatttct 8821631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 22371228 - 22371192
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  22371228 aaagttatcactaaatggatgttcaaatatcatttct 22371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 24482997 - 24483033
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  24482997 aaagttgtcacaaaatggatgttcaaatatcatttct 24483033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 28419248 - 28419284
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  28419248 aaagttgttaataaatagatgttcaaatatcatttct 28419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 29057716 - 29057660
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||    |||||| ||| ||||||||||||||    
T  29057716 ataatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttct 29057660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 29846894 - 29846950
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||    |||||| ||| ||||||||||||||    
T  29846894 ataatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttct 29846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30909066 - 30909030
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||| |||||||||||||||||||    
T  30909066 aaagttgtcactaaatgaatgttcaaatatcatttct 30909030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 32767713 - 32767677
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  32767713 aaagttgtcactaaatggatattcaaatatcatttct 32767677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33375897 - 33375861
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| |||||||||||||| |||||||||||||    
T  33375897 aaagttgtcactaaatggatgttgaaatatcatttct 33375861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37508532 - 37508568
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  37508532 aaagttatcactaaatggatgttcaaatatcatttct 37508568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37927239 - 37927275
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  37927239 aaagttgtcaccaaatggatgttcaaatatcatttct 37927275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39671132 - 39671168
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  39671132 aaagttgtcactaaatagatgttcaaatatcatttct 39671168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 42718184 - 42718132
Alignment:
Q  7 gtgagtatgagagagaaagttgttact-aaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||| | |||||| ||| ||||||||||||||    
T  42718184 gtgaatatgagagagaaagttgttaataaaatggttgtacaaatatcatttct 42718132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 46953006 - 46952950
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||| | |  |||||| ||| ||||||||||||||    
T  46953006 ataatgtgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcatttct 46952950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 49983385 - 49983421
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  49983385 aaagttgtaaccaaatggatgttcaaatatcatttct 49983421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 50207004 - 50207040
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  50207004 aaagttgtcacaaaatggatgttcaaatatcatttct 50207040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 54260212 - 54260260
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||||||||| ||||||||||||  |||| |||||| |||||||||||    
T  54260212 tgagtatgagaaagaaagttgttataaaatagatgttgaaatatcattt 54260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8200145 - 8200088
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  8200145 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 8200088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33358160 - 33358217
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  33358160 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 33358217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44632598 - 44632541
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  44632598 aataatgtgagtatgagagagaaagttgtcaccaaatggatgttcaaatatcatttct 44632541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48220145 - 48220202
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  48220145 aataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 48220202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 36494526 - 36494478
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36494526 tgagtatgagagagaaagttgtcactaaatggatgttcaaatatcattt 36494478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 45065909 - 45065960
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  45065909 gtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 45065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32319310 - 32319367
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  32319310 aataatgtgagtatgagagagaaagttgtcaccaaatggatgtttaaatatcatttct 32319367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49241506 - 49241563
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| ||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  49241506 aataatgtgagtatgagagagaaagttgtcacaaagtggatgttcaaatatcatttct 49241563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 18336210 - 18336159
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||    
T  18336210 gtgagtatgagagagaaagttgtcacaaaatgaatgttcaaatatcatttct 18336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 19969569 - 19969620
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  19969569 gtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 50781577 - 50781628
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  50781577 gtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 50781628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 40596057 - 40596113
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| || |||||| ||| ||||||||||||||    
T  40596057 ataatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttct 40596113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 41507197 - 41507253
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| || |||||| ||| ||||||||||||||    
T  41507197 ataatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttct 41507253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 34818053 - 34818103
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||||||||||    
T  34818053 tgagtatgagagagaaagttgttaggaaatgaatgtacaaatatcatttct 34818103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 756893 - 756852
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttctagtta 63  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  756893 aaagttgtcactaaatggatgttcaaatatcatttctcgtta 756852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6143753 - 6143696
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| || |||||||||||||||||||| || || |||||||||||| |||||||||    
T  6143753 aataatgtaagtatgagagagaaagttgtcacaaagtggatgttcaaacatcatttct 6143696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 3603148 - 3603112
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  3603148 aaagttgtcactaaatggatgttcaaatatcatttct 3603112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7128155 - 7128119
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  7128155 aaagttgtcactaaatggatgttcaaatatcatttct 7128119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8411752 - 8411788
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  8411752 aaagttgtcactaaatggatgttcaaatatcatttct 8411788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 20565156 - 20565188
Alignment:
Q  26 ttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||||||||||||||    
T  20565156 ttgttactaaatggatgttcaaatatcatttct 20565188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 26585913 - 26585949
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  26585913 aaagttgtcactaaatggatgttcaaatatcatttct 26585949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 26837489 - 26837453
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26837489 aaagttgttactaagtggatgttcaaatatcatttct 26837453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 27687522 - 27687578
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| |||||||| || |||||| ||| ||||||||||||||    
T  27687522 ataatgtgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttct 27687578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40139183 - 40139127
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| ||| ||||||||||||||    
T  40139183 ataatgtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcatttct 40139127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 46082155 - 46082191
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  46082155 aaagttgtcactaaatggatgttcaaatatcatttct 46082191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 46903538 - 46903482
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||  | |||||| ||| ||||||||||||||    
T  46903538 ataatgtgagtatgagagagaaagttgtatcaaaatggttgtacaaatatcatttct 46903482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 47398454 - 47398510
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  47398454 ataatgtgagtatgagagagaaaattgtcaaaaaatgaatgttcaaatatcatttct 47398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 49453548 - 49453492
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| || || ||| ||| ||||||||||||||    
T  49453548 ataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttct 49453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5477165 - 5477220
Alignment:
Q  1 aataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcattt 56  Q
    ||||| ||||||||||||||||||||||| || || ||| ||| ||||||||||||    
T  5477165 aataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 36673739 - 36673790
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatg-ttcaaatatcatttct 58  Q
    |||||||||||||||||||||| || ||||||||| || |||||||||||||    
T  36673739 tgagtatgagagagaaagttgtcaccaaatggatgttttaaatatcatttct 36673790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 50797843 - 50797792
Alignment:
Q  7 gtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||||||||||||| || |||||  ||| ||||||||||||||    
T  50797843 gtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttct 50797792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 48103398 - 48103447
Alignment:
Q  8 tgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||||| || |||| | ||||||||||||||||||    
T  48103398 tgagtatgagagagaaagttgtcac-aaatagttgttcaaatatcatttct 48103447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 50882122 - 50882168
Alignment:
Q  12 tatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||||| |||| || ||||| |||||||||||||||||||    
T  50882122 tatgagagagaaaattgtcacaaaatgaatgttcaaatatcatttct 50882168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 30658882 - 30658919
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttcta 59  Q
    |||||||| || ||||||||||||||||||||||||||    
T  30658882 aaagttgtcacaaaatggatgttcaaatatcatttcta 30658919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 51718629 - 51718686
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgt-tactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||||||||||||  |  |||||| ||||||||||||||||||    
T  51718629 ataatgtgagtatgagagagaaagttgtgaaaaaaatggttgttcaaatatcatttct 51718686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 902675 - 902639
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  902675 aaagttgtcactaaatagatgttcaaatatcatttct 902639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1852985 - 1853021
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  1852985 aaagttgtcactaaatagatgttcaaatatcatttct 1853021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4470348 - 4470384
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  4470348 aaagttgtcacaaaatggatgttcaaatatcatttct 4470384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 5975605 - 5975549
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  || ||||||| || |||||||||||    
T  5975605 ataatgtgagtatgagagagaaagttgtcaaaaagtggatgtacatatatcatttct 5975549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 14983841 - 14983785
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||| ||||||||||||||||||||  || ||| ||| ||||||||||||||    
T  14983841 ataatgtgaatatgagagagaaagttgttaaaaagtggttgtacaaatatcatttct 14983785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 15466815 - 15466759
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||| |||| |||| ||||||||||| || ||||||| ||||||||||||||    
T  15466815 ataatgtgaatatgtgagataaagttgttacaaagtggatgtacaaatatcatttct 15466759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 16836118 - 16836174
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||||| |||||||| || |||||  ||| ||||||||||||||    
T  16836118 ataatgtgagtatgagagaaaaagttgtcacaaaatgattgtacaaatatcatttct 16836174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 33024605 - 33024641
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  33024605 aaagttgtcactaaatagatgttcaaatatcatttct 33024641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 35136881 - 35136845
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  35136881 aaagttgtcacaaaatggatgttcaaatatcatttct 35136845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 36577446 - 36577482
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  36577446 aaagttgtcacaaaatggatgttcaaatatcatttct 36577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 42539475 - 42539419
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||| |||||||||||||||| ||  ||||| ||| ||||||||||||||    
T  42539475 ataatgtgagtctgagagagaaagttgtcacataatggttgtacaaatatcatttct 42539419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 43757656 - 43757600
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||| ||||||||||||  | |||||| ||| ||||||||||||||    
T  43757656 ataatgtgagtatgaaagagaaagttgtatcaaaatggttgtacaaatatcatttct 43757600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 43893294 - 43893258
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  43893294 aaagttgtgacaaaatggatgttcaaatatcatttct 43893258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 44789177 - 44789213
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| || |||||||||||||||||||||||||    
T  44789177 aaagttgtcacaaaatggatgttcaaatatcatttct 44789213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 45272163 - 45272219
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  || ||| ||| ||||||||||||||    
T  45272163 ataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttct 45272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 48325781 - 48325837
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| |||||||||||| ||||| |||| || |||||| ||| ||||||||||||||    
T  48325781 ataatgtgagtatgagatagaaaattgtcacaaaatggttgtacaaatatcatttct 48325837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48624946 - 48624885
Alignment:
Q  1 aataaggtgagtatgagagagaaagt----tgttactaaatggatgttcaaatatcatttct 58  Q
    ||||| |||||||| |||||||||||    ||| || |||||||||||||||||||||||||    
T  48624946 aataatgtgagtataagagagaaagtaagttgtcacaaaatggatgttcaaatatcatttct 48624885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 52714935 - 52714971
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    ||||||||||  |||||||||||||||||||||||||    
T  52714935 aaagttgttataaaatggatgttcaaatatcatttct 52714971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 44835 - 44787
Alignment:
Q  10 agtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||    
T  44835 agtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 44787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 19673 - 19637
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  19673 aaagttgtcactaaatggatgttcaaatatcatttct 19637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 31603 - 31659
Alignment:
Q  2 ataaggtgagtatgagagagaaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||| ||||||||||||||||||||||| |  |||||| ||| ||||||||||||||    
T  31603 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttct 31659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 44 - 8
Alignment:
Q  22 aaagttgttactaaatggatgttcaaatatcatttct 58  Q
    |||||| | ||||||||||||||||||||||||||||    
T  44 aaagttttcactaaatggatgttcaaatatcatttct 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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