View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16902_high_18 (Length: 218)
Name: NF16902_high_18
Description: NF16902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16902_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8649790 - 8649953
Alignment:
| Q |
1 |
gtgaaagtgattggtctcaaatatttaagagcatcgtaaactccaaggtgatgtaagaccaaaatattttacactattattatttaaagatatagaaagg |
100 |
Q |
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| T |
8649790 |
gtgaaagtgattgatctgaaatatctaagagcatcgtaaactccaaggtgatgtaagaccaaaatattttacactattattatttaaagatatagaaagg |
8649889 |
T |
|
| Q |
101 |
atgtaacactaatgcatttgcctctgcatttctattcaacttagttgtatatggaaaatgatgt |
164 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8649890 |
atgtaacactaatgcatttgcctctgcatttctattcaacttagttgtatatggaaaatgatgt |
8649953 |
T |
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