View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16902_low_15 (Length: 305)
Name: NF16902_low_15
Description: NF16902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16902_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 6 - 293
Target Start/End: Complemental strand, 50786999 - 50786698
Alignment:
| Q |
6 |
atgtataattcaggatacgtacgtaacagcttttagatactactatcatagttacagtgtctacaatagtattaccatcattttcaacaaatttatttta |
105 |
Q |
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| T |
50786999 |
atgtataattcaggatacgtacgtaacagcttttagatactactatcatagttacagtgtctacaatagtattaccatcattttcaacaaatttatttta |
50786900 |
T |
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| Q |
106 |
ataaatttaaataataaaaattctagctgatctctcattgatttgatatata--------------tatagaaattttagccgctattatattttatgtg |
191 |
Q |
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| T |
50786899 |
ataaatttaaataataaaaattctagctgatctctcattgatttgatatatatatatatatatatatatagaaattttagccgctagtatattttatgtg |
50786800 |
T |
|
| Q |
192 |
cttttttagtaattaacctctgagaaactaatgattaaatgagtaatatcattgatctaattcttctgtcaaaaataattattaatctaattcatgcatt |
291 |
Q |
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| T |
50786799 |
cttttttagtaattaacctctgagaaactaatgattaaatgagtaatatcattgatctaattcttctgtcaaaaataattattaatctaattcatgcatt |
50786700 |
T |
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| Q |
292 |
tt |
293 |
Q |
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|| |
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| T |
50786699 |
tt |
50786698 |
T |
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