View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16904_high_58 (Length: 300)
Name: NF16904_high_58
Description: NF16904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16904_high_58 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 6 - 286
Target Start/End: Original strand, 42028971 - 42029250
Alignment:
| Q |
6 |
agtagcataggtcaaggtgcttaattcgatatatgccaagattatttaatgaacttgtaagctttggttggattacaattacataccatcaagatattct |
105 |
Q |
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| T |
42028971 |
agtagtataggtcaaggtgcttaattcgatatatgccaagattatttaatgaacttgtaagctttggttggattacaattacataccatcaagatattct |
42029070 |
T |
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| Q |
106 |
tatctaaaatttgaaccctacccaaattaaacatgttgaaagggaaattacattaacatatcatccaaatatacatgacatatcatccaaacacttctat |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||| ||| |
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| T |
42029071 |
tatctaaaatttgaaccctacccaaattaaacatgttgaaagggaaattacattaac-tcggacacttatatacatgacatatcatccaaacacttgtat |
42029169 |
T |
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| Q |
206 |
cgttttccattataattaatcaataaaaattgtcattaaaaaattgacatatcaactttttgttttaagggaataatattg |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
42029170 |
cgttttccattataattaatcaataaaaattgtcattaaaaaattgacatatcaattttttgttttaagggaataatattg |
42029250 |
T |
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