View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16904_high_62 (Length: 288)
Name: NF16904_high_62
Description: NF16904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16904_high_62 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 21740188 - 21739918
Alignment:
| Q |
1 |
gcaaaacctgattttcagagctttctgcagcattagaacctttcacattttctacatccttagtagcttcaggaataggactttgagacactgatgaaga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
21740188 |
gcaaaacctgattttcagagctttctgcagcattagaacctttaacattttctacatccttagtagcttcaggaatagaactttgagacactgatgaaga |
21740089 |
T |
|
| Q |
101 |
tactttcccgtcaaattccctggtctcaggttccttcaaactcgatattctaacattctcatcaggcaagacatgtactttatcctcacttctcttcaca |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |
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| T |
21740088 |
tactttcccgtcaaattccctggtctcgggttccttcaaacttgatattctaacaacctcatcaggtaagacatgtactttatcctcatttctcttcaca |
21739989 |
T |
|
| Q |
201 |
gcaagatcattttccgctactcgagagcccaatggtttctctagtatatcattcacagtacctccgctttg |
271 |
Q |
| |
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||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21739988 |
gcaagatcagtttccgctgctcgagagcccaatggtttctctagtatatcattcacagtacctccgctttg |
21739918 |
T |
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