View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16905_high_31 (Length: 253)

Name: NF16905_high_31
Description: NF16905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16905_high_31
NF16905_high_31
[»] chr1 (39 HSPs)
chr1 (170-241)||(33706557-33706628)
chr1 (170-241)||(31032063-31032134)
chr1 (171-234)||(44510431-44510494)
chr1 (171-241)||(7154849-7154919)
chr1 (170-241)||(21097380-21097450)
chr1 (173-240)||(35956305-35956371)
chr1 (171-241)||(36732474-36732543)
chr1 (184-241)||(30838850-30838907)
chr1 (173-241)||(14535353-14535421)
chr1 (173-240)||(7557512-7557578)
chr1 (192-241)||(10772562-10772611)
chr1 (184-241)||(33704416-33704473)
chr1 (184-241)||(36307665-36307722)
chr1 (170-238)||(46464550-46464617)
chr1 (172-241)||(30301000-30301066)
chr1 (179-241)||(23264140-23264201)
chr1 (184-241)||(24780881-24780938)
chr1 (170-241)||(30837761-30837829)
chr1 (192-241)||(31029913-31029962)
chr1 (172-240)||(29647541-29647608)
chr1 (178-241)||(29522057-29522119)
chr1 (170-241)||(33004462-33004532)
chr1 (170-241)||(52407380-52407449)
chr1 (171-241)||(35954145-35954214)
chr1 (183-241)||(44512531-44512589)
chr1 (184-241)||(7556108-7556164)
chr1 (171-240)||(44110214-44110282)
chr1 (172-241)||(44299066-44299134)
chr1 (192-241)||(48127597-48127646)
chr1 (173-241)||(12769624-12769691)
chr1 (184-240)||(52404484-52404539)
chr1 (170-241)||(11757152-11757222)
chr1 (210-241)||(46118145-46118176)
chr1 (172-241)||(5328854-5328922)
chr1 (184-241)||(21096654-21096710)
chr1 (184-241)||(25655678-25655734)
chr1 (184-241)||(35954238-35954294)
chr1 (180-241)||(43846213-43846273)
chr1 (168-241)||(43847739-43847810)
[»] chr4 (62 HSPs)
chr4 (83-169)||(28814242-28814324)
chr4 (173-241)||(8941233-8941301)
chr4 (169-241)||(20352024-20352096)
chr4 (173-241)||(30823697-30823765)
chr4 (170-241)||(7489264-7489335)
chr4 (170-241)||(23417197-23417268)
chr4 (170-241)||(54921380-54921451)
chr4 (171-241)||(41039572-41039642)
chr4 (173-240)||(4654973-4655040)
chr4 (171-241)||(46719694-46719763)
chr4 (171-241)||(52449340-52449410)
chr4 (168-240)||(3033853-3033925)
chr4 (173-241)||(13530035-13530102)
chr4 (173-241)||(47805597-47805664)
chr4 (173-241)||(49875724-49875792)
chr4 (173-241)||(16666665-16666732)
chr4 (173-241)||(28172149-28172216)
chr4 (183-241)||(4652798-4652856)
chr4 (183-241)||(41041603-41041661)
chr4 (171-241)||(43304851-43304920)
chr4 (184-241)||(7487074-7487131)
chr4 (170-241)||(47649398-47649468)
chr4 (171-241)||(17363040-17363110)
chr4 (183-241)||(52447211-52447269)
chr4 (200-241)||(9366912-9366953)
chr4 (184-241)||(23419467-23419524)
chr4 (174-241)||(31289460-31289526)
chr4 (170-212)||(7489375-7489417)
chr4 (175-241)||(23931593-23931658)
chr4 (183-241)||(49970384-49970442)
chr4 (184-241)||(17360974-17361031)
chr4 (184-241)||(20354236-20354292)
chr4 (184-241)||(20787202-20787258)
chr4 (184-241)||(31292762-31292818)
chr4 (184-241)||(34072866-34072922)
chr4 (169-241)||(10659166-10659236)
chr4 (169-241)||(10873311-10873381)
chr4 (173-241)||(17518858-17518925)
chr4 (178-241)||(31309420-31309482)
chr4 (170-241)||(43940386-43940457)
chr4 (171-241)||(7113861-7113930)
chr4 (183-241)||(13534725-13534782)
chr4 (184-242)||(16664495-16664552)
chr4 (171-241)||(19869707-19869776)
chr4 (171-241)||(34074967-34075036)
chr4 (179-241)||(38623619-38623680)
chr4 (184-241)||(23933716-23933772)
chr4 (174-239)||(24577922-24577986)
chr4 (178-239)||(47650796-47650856)
chr4 (194-241)||(42180221-42180267)
chr4 (171-241)||(14270105-14270173)
chr4 (210-240)||(20785168-20785198)
chr4 (171-241)||(26923820-26923889)
chr4 (183-241)||(27956538-27956595)
chr4 (175-241)||(31624682-31624747)
chr4 (179-241)||(48952784-48952845)
chr4 (184-241)||(17520091-17520147)
chr4 (180-241)||(19871241-19871300)
chr4 (173-241)||(35046221-35046287)
chr4 (184-241)||(49873561-49873617)
chr4 (184-241)||(50496291-50496347)
chr4 (185-241)||(7111062-7111117)
[»] chr8 (55 HSPs)
chr8 (173-241)||(4621484-4621552)
chr8 (170-241)||(16097612-16097683)
chr8 (170-241)||(3703167-3703238)
chr8 (170-241)||(26965363-26965434)
chr8 (171-241)||(278731-278801)
chr8 (171-241)||(637051-637121)
chr8 (171-241)||(822854-822924)
chr8 (171-241)||(17946583-17946653)
chr8 (171-241)||(18957404-18957474)
chr8 (171-241)||(23345171-23345241)
chr8 (171-240)||(38059243-38059312)
chr8 (170-241)||(41182399-41182470)
chr8 (171-241)||(2081366-2081436)
chr8 (171-241)||(17852389-17852459)
chr8 (171-241)||(39859947-39860016)
chr8 (173-241)||(15881233-15881301)
chr8 (173-241)||(38576588-38576655)
chr8 (173-241)||(6096831-6096898)
chr8 (173-237)||(30475974-30476038)
chr8 (171-241)||(35019235-35019304)
chr8 (171-237)||(40618499-40618564)
chr8 (184-241)||(25583755-25583812)
chr8 (184-241)||(27911894-27911951)
chr8 (184-241)||(27958313-27958370)
chr8 (169-241)||(40302412-40302483)
chr8 (183-241)||(276589-276647)
chr8 (183-241)||(639202-639260)
chr8 (183-241)||(825008-825066)
chr8 (183-241)||(4622893-4622951)
chr8 (168-241)||(41546848-41546921)
chr8 (179-241)||(44255961-44256023)
chr8 (184-241)||(17853425-17853482)
chr8 (173-241)||(38099263-38099331)
chr8 (173-241)||(45407245-45407312)
chr8 (170-241)||(30112180-30112250)
chr8 (190-241)||(38060915-38060966)
chr8 (170-241)||(39070307-39070377)
chr8 (183-241)||(17948647-17948705)
chr8 (171-240)||(42647305-42647373)
chr8 (176-232)||(28084755-28084810)
chr8 (192-240)||(39857878-39857926)
chr8 (198-241)||(18955120-18955163)
chr8 (175-241)||(15825071-15825136)
chr8 (179-237)||(41671489-41671546)
chr8 (192-241)||(15883566-15883615)
chr8 (184-241)||(41544849-41544905)
chr8 (192-241)||(45409293-45409341)
chr8 (179-239)||(43129344-43129403)
chr8 (210-241)||(40304551-40304582)
chr8 (199-241)||(2082423-2082465)
chr8 (210-240)||(13141448-13141478)
chr8 (210-240)||(16095805-16095835)
chr8 (192-241)||(3846520-3846568)
chr8 (172-241)||(5588110-5588179)
chr8 (184-241)||(38577195-38577251)
[»] chr2 (36 HSPs)
chr2 (169-241)||(38280257-38280329)
chr2 (173-241)||(25225390-25225458)
chr2 (171-234)||(3904919-3904982)
chr2 (173-241)||(39965180-39965248)
chr2 (173-240)||(75574-75641)
chr2 (171-234)||(14004023-14004086)
chr2 (171-241)||(21191852-21191922)
chr2 (173-241)||(2290386-2290453)
chr2 (170-241)||(28389953-28390022)
chr2 (171-241)||(1053134-1053203)
chr2 (172-241)||(15400924-15400992)
chr2 (183-241)||(3907048-3907106)
chr2 (183-241)||(14006193-14006251)
chr2 (171-241)||(39067041-39067110)
chr2 (173-241)||(4736713-4736779)
chr2 (174-241)||(3849795-3849861)
chr2 (184-241)||(38282406-38282463)
chr2 (184-240)||(3851820-3851875)
chr2 (171-241)||(7575628-7575696)
chr2 (184-241)||(77742-77799)
chr2 (184-241)||(4738407-4738463)
chr2 (184-241)||(27551741-27551797)
chr2 (168-241)||(36603012-36603084)
chr2 (173-241)||(38932518-38932585)
chr2 (179-241)||(518047-518108)
chr2 (175-241)||(3753008-3753072)
chr2 (179-241)||(18248664-18248725)
chr2 (184-241)||(37726063-37726118)
chr2 (179-241)||(39159852-39159913)
chr2 (179-241)||(39209281-39209342)
chr2 (184-241)||(15152384-15152440)
chr2 (192-241)||(25223330-25223378)
chr2 (184-241)||(28391946-28392002)
chr2 (171-240)||(33182850-33182918)
chr2 (173-241)||(10455681-10455748)
chr2 (173-237)||(24457845-24457908)
[»] chr7 (49 HSPs)
chr7 (170-241)||(16273907-16273978)
chr7 (168-241)||(41338282-41338355)
chr7 (172-241)||(44456896-44456965)
chr7 (171-241)||(4861912-4861982)
chr7 (170-239)||(723483-723552)
chr7 (171-239)||(38179659-38179727)
chr7 (173-241)||(40013623-40013691)
chr7 (173-241)||(47906947-47907015)
chr7 (173-240)||(3412676-3412743)
chr7 (171-241)||(20122326-20122396)
chr7 (170-234)||(33244606-33244670)
chr7 (173-241)||(41856272-41856340)
chr7 (170-241)||(48950230-48950301)
chr7 (173-241)||(9659011-9659078)
chr7 (173-241)||(46553435-46553503)
chr7 (171-241)||(21817361-21817429)
chr7 (170-241)||(23592537-23592607)
chr7 (171-241)||(19063904-19063974)
chr7 (171-241)||(41287553-41287622)
chr7 (171-241)||(48684578-48684647)
chr7 (184-241)||(20119885-20119942)
chr7 (184-240)||(725636-725692)
chr7 (173-241)||(17286327-17286394)
chr7 (171-241)||(4657018-4657082)
chr7 (184-241)||(4859584-4859641)
chr7 (192-241)||(16277675-16277724)
chr7 (184-241)||(44459405-44459462)
chr7 (173-241)||(47505679-47505746)
chr7 (184-241)||(41336130-41336187)
chr7 (184-241)||(41858655-41858712)
chr7 (197-241)||(40015786-40015830)
chr7 (184-240)||(46555594-46555650)
chr7 (170-241)||(41405937-41406007)
chr7 (181-241)||(44884763-44884819)
chr7 (183-241)||(9663701-9663758)
chr7 (183-241)||(21737446-21737502)
chr7 (183-241)||(33246751-33246808)
chr7 (171-241)||(47251966-47252035)
chr7 (171-240)||(33982603-33982671)
chr7 (210-241)||(18995079-18995110)
chr7 (174-241)||(38224340-38224406)
chr7 (178-241)||(44882577-44882639)
chr7 (210-241)||(47909447-47909478)
chr7 (171-241)||(586169-586238)
chr7 (171-241)||(8391439-8391508)
chr7 (179-241)||(37624154-37624215)
chr7 (183-241)||(38229776-38229833)
chr7 (192-241)||(17968410-17968458)
chr7 (173-214)||(28588193-28588234)
[»] chr3 (77 HSPs)
chr3 (170-241)||(13243564-13243635)
chr3 (171-241)||(11123636-11123706)
chr3 (171-241)||(23022016-23022086)
chr3 (171-241)||(27330113-27330183)
chr3 (170-241)||(8849751-8849822)
chr3 (170-241)||(41695913-41695984)
chr3 (171-241)||(40908480-40908550)
chr3 (171-241)||(53583695-53583765)
chr3 (172-241)||(37218168-37218237)
chr3 (169-241)||(2219967-2220039)
chr3 (173-241)||(27128160-27128228)
chr3 (173-241)||(44841226-44841294)
chr3 (173-241)||(50546473-50546541)
chr3 (170-241)||(29894748-29894819)
chr3 (172-241)||(45051738-45051807)
chr3 (173-237)||(4230848-4230912)
chr3 (173-241)||(47910953-47911021)
chr3 (173-241)||(30438267-30438335)
chr3 (173-241)||(37787254-37787322)
chr3 (170-241)||(15082708-15082779)
chr3 (171-241)||(41103715-41103785)
chr3 (183-241)||(45172705-45172763)
chr3 (171-241)||(51720860-51720929)
chr3 (173-239)||(55219875-55219940)
chr3 (171-240)||(22606837-22606906)
chr3 (184-241)||(53845139-53845196)
chr3 (169-241)||(50610588-50610660)
chr3 (170-237)||(18763909-18763975)
chr3 (179-241)||(11121080-11121142)
chr3 (183-241)||(30043634-30043692)
chr3 (171-241)||(31311666-31311735)
chr3 (184-241)||(13213299-13213356)
chr3 (184-241)||(37785292-37785349)
chr3 (184-241)||(44843341-44843398)
chr3 (173-241)||(38698800-38698867)
chr3 (183-241)||(2217883-2217941)
chr3 (179-241)||(27239205-27239267)
chr3 (171-241)||(52745654-52745724)
chr3 (184-241)||(4233191-4233248)
chr3 (192-241)||(15084714-15084763)
chr3 (184-241)||(22604724-22604781)
chr3 (192-241)||(23019699-23019748)
chr3 (192-241)||(27320873-27320922)
chr3 (176-241)||(50535960-50536024)
chr3 (171-240)||(50935460-50935528)
chr3 (177-241)||(3890777-3890840)
chr3 (171-238)||(42827983-42828049)
chr3 (178-241)||(43338222-43338284)
chr3 (171-241)||(36465585-36465654)
chr3 (183-241)||(40906007-40906065)
chr3 (192-241)||(6177354-6177403)
chr3 (184-241)||(8852293-8852350)
chr3 (184-241)||(37220249-37220306)
chr3 (184-241)||(41101517-41101574)
chr3 (192-241)||(42825876-42825925)
chr3 (173-241)||(30361644-30361711)
chr3 (184-240)||(47913099-47913155)
chr3 (173-241)||(54410696-54410763)
chr3 (173-241)||(55413165-55413232)
chr3 (179-241)||(32001225-32001286)
chr3 (171-241)||(37178242-37178311)
chr3 (184-241)||(18410065-18410122)
chr3 (184-241)||(45169828-45169885)
chr3 (184-241)||(50548637-50548694)
chr3 (173-241)||(10825749-10825816)
chr3 (171-239)||(22981399-22981466)
chr3 (173-241)||(53776402-53776469)
chr3 (210-241)||(30440429-30440460)
chr3 (210-241)||(38235378-38235409)
chr3 (190-241)||(41698234-41698285)
chr3 (178-241)||(54409366-54409428)
chr3 (210-240)||(18412109-18412139)
chr3 (179-241)||(22977835-22977896)
chr3 (183-241)||(39129070-39129126)
chr3 (172-241)||(22731373-22731442)
chr3 (184-240)||(3892828-3892883)
chr3 (168-240)||(48071719-48071790)
[»] chr6 (21 HSPs)
chr6 (171-241)||(16922248-16922318)
chr6 (171-241)||(17557572-17557642)
chr6 (171-241)||(14105938-14106008)
chr6 (170-241)||(4587860-4587931)
chr6 (171-241)||(23582213-23582283)
chr6 (171-241)||(27784425-27784495)
chr6 (173-241)||(953654-953722)
chr6 (172-241)||(5686338-5686406)
chr6 (184-241)||(11837789-11837846)
chr6 (184-241)||(23580091-23580148)
chr6 (184-241)||(27782272-27782329)
chr6 (184-241)||(11154825-11154882)
chr6 (184-241)||(14103797-14103854)
chr6 (184-241)||(17551019-17551076)
chr6 (174-241)||(28580959-28581025)
chr6 (184-241)||(4590013-4590070)
chr6 (184-241)||(24083004-24083060)
chr6 (184-241)||(27438218-27438275)
chr6 (192-241)||(25109367-25109415)
chr6 (171-241)||(13866014-13866081)
chr6 (183-241)||(28578430-28578487)
[»] chr5 (41 HSPs)
chr5 (171-241)||(39590716-39590786)
chr5 (171-240)||(9593835-9593904)
chr5 (173-241)||(37938494-37938562)
chr5 (171-241)||(822818-822888)
chr5 (171-241)||(12501408-12501478)
chr5 (172-241)||(30128626-30128695)
chr5 (169-241)||(27018120-27018192)
chr5 (171-241)||(744072-744142)
chr5 (171-240)||(20544189-20544258)
chr5 (171-241)||(19666627-19666697)
chr5 (172-241)||(31547465-31547534)
chr5 (171-241)||(42609905-42609974)
chr5 (178-241)||(9591612-9591675)
chr5 (183-241)||(27020219-27020277)
chr5 (184-241)||(745739-745796)
chr5 (172-241)||(7179660-7179728)
chr5 (177-241)||(15527420-15527483)
chr5 (179-241)||(29390984-29391046)
chr5 (184-241)||(12499226-12499283)
chr5 (184-241)||(19664770-19664827)
chr5 (180-241)||(37272717-37272777)
chr5 (192-241)||(37940127-37940176)
chr5 (184-241)||(42612394-42612451)
chr5 (170-241)||(19505048-19505118)
chr5 (183-241)||(20546329-20546387)
chr5 (171-241)||(27552669-27552738)
chr5 (184-241)||(39588266-39588323)
chr5 (173-241)||(6720888-6720955)
chr5 (173-241)||(11986593-11986659)
chr5 (179-241)||(5099856-5099917)
chr5 (171-241)||(9985359-9985428)
chr5 (171-241)||(15527279-15527348)
chr5 (172-241)||(29388962-29389031)
chr5 (184-241)||(34401523-34401579)
chr5 (184-241)||(34663579-34663635)
chr5 (197-241)||(7181216-7181259)
chr5 (173-241)||(34402156-34402222)
chr5 (174-241)||(3033069-3033135)
chr5 (210-241)||(27550636-27550667)
chr5 (179-241)||(15524119-15524180)
chr5 (184-241)||(37270252-37270308)
[»] scaffold0115 (2 HSPs)
scaffold0115 (173-241)||(30687-30755)
scaffold0115 (184-241)||(20729-20786)
[»] scaffold0779 (1 HSPs)
scaffold0779 (171-241)||(147-217)
[»] scaffold0006 (1 HSPs)
scaffold0006 (171-241)||(56491-56561)
[»] scaffold0208 (2 HSPs)
scaffold0208 (169-241)||(3858-3929)
scaffold0208 (188-241)||(5884-5936)
[»] scaffold0003 (1 HSPs)
scaffold0003 (184-241)||(49087-49144)


Alignment Details
Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 33706628 - 33706557
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33706628 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 33706557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 31032134 - 31032063
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31032134 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 31032063  T

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Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 44510431 - 44510494
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaat 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44510431 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaat 44510494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 7154919 - 7154849
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  7154919 ggttttttttagattaccctctcttatttagagggtattttaccttatcatgatatcaaccaatcaaaatg 7154849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 21097450 - 21097380
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| ||||||||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||||    
T  21097450 aggttttttttagattaccctatcttatttataaggtattt-accttctcatgatatcaaccaatcaaaatg 21097380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 35956371 - 35956305
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  35956371 ttttttctatattaccctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaat 35956305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 36732543 - 36732474
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  36732543 ggttttttctagattaccctcgcttatttagagggta-tttaccctttcatgatatcaaccaattaaaatg 36732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 30838907 - 30838850
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  30838907 ttaccctctcttatttagagggtaatttaccctcttatgatatcaaccaatcaaaatg 30838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 14535353 - 14535421
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  14535353 ttttttttagattagcctctcttatttagatggtattttatcctctcatgatatcaaccaattaaaatg 14535421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 7557578 - 7557512
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||||||| || |||| | |||||||||||| |||||||||||||||||||||||||||||    
T  7557578 ttttttctagattactctctcttgtctagagggtattt-accctctcatgatatcaaccaatcaaaat 7557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 10772562 - 10772611
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  10772562 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 10772611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 33704416 - 33704473
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  33704416 ttaccctctcttgtttagagggtaatttaccctctcatgttatcaaccaatcaaaatg 33704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 36307665 - 36307722
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  36307665 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaatcaaaatg 36307722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 46464617 - 46464550
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 238  Q
    ||||||||||||||||||||| |||| ||||| |||| ||| | |||||||||||||||||||||||||    
T  46464617 aggttttttctagattaccctctcttgtttagggggtgttt-atcctctcatgatatcaaccaatcaaa 46464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 30301000 - 30301066
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||| |||||||||||||||||||  |||   ||| |||||||||||||||||||    
T  30301000 gttttttctagattaccctctcttatttagagggtatttacccc---catcatatcaaccaatcaaaatg 30301066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 23264201 - 23264140
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| ||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  23264201 ctagattaccctatcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatg 23264140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 24780881 - 24780938
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||| ||||| |||||    
T  24780881 ttaccctatcttgtttagagggtaatttaccgtctcatgatatcaatcaatcgaaatg 24780938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 30837761 - 30837829
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| |||||||||||||   | ||| | |||||||||||||| |||||||||||    
T  30837761 aggttttttctagattaccctctcttatttagagg---tattatcatctcatgatatcaatcaatcaaaatg 30837829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 31029913 - 31029962
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  31029913 tcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatg 31029962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 29647541 - 29647608
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||| ||||||||||| | |||||||||||  |||| ||| |||||||||||||||||||||||||    
T  29647541 gttttttttagattaccctctgttatttagaggacattt-accgtctcatgatatcaaccaatcaaaat 29647608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 29522119 - 29522057
Alignment:
Q  178 tctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| ||||||| |||| ||||||||||| || ||||| ||||||||||||||||||||||||    
T  29522119 tctaggttaccctctcttgtttagagggtaatt-accctgtcatgatatcaaccaatcaaaatg 29522057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 33004462 - 33004532
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| ||||| || |||| ||||| |||||||| |||||||||| |||||||| ||||||||||    
T  33004462 aggttttttctaaattactctctcttgtttagggggtattt-accctctcataatatcaactaatcaaaatg 33004532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 52407449 - 52407380
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| ||||||||||| ||||  |||| |||||||| |||| |||||||||||||||||||||||||    
T  52407449 aggttttttatagattaccctctcttggttag-gggtattt-accccctcatgatatcaaccaatcaaaatg 52407380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 35954145 - 35954214
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| || ||||| || | || ||||||| |||||| ||||||||||||||||||||||||||||||    
T  35954145 ggttttttttaaattactctcttttgtttagagagtattt-accctctcatgatatcaaccaatcaaaatg 35954214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 44512589 - 44512531
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| || |||| |||||||| || ||||| |||||||||||||||||||||||||||    
T  44512589 attactctctcttgtttagaggttaatttactctctcatgatatcaaccaatcaaaatg 44512531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 7556108 - 7556164
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || |||||||||||||||||| |||||||||||    
T  7556108 ttaccctctcttgtttagagggtaatt-accctctcatgatatcaatcaatcaaaatg 7556164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 44110282 - 44110214
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||| |||||||||| ||||||||||| |||||  |||| ||| || ||||||||||||||||    
T  44110282 ggttttttctacattaccctattttatttagaggatatttatccct-tcaagacatcaaccaatcaaaat 44110214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 44299066 - 44299134
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||| |||||||| |||| ||||||||||| |||||||  ||| |||| |||||||||||||||    
T  44299066 gttttttctacattaccctctcttgtttagagggta-tttaccccttcaagataccaaccaatcaaaatg 44299134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 48127597 - 48127646
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| |||||||| || |||||||||| ||||||||||||||||||||||    
T  48127597 tcttgtttagaggataatttaccctcttatgatatcaaccaatcaaaatg 48127646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 12769691 - 12769624
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| |||| ||||| || | ||| ||| ||||||||||||| ||||||||||||    
T  12769691 ttttttctagattaccctctcttgtttaggggatcttt-accttctcatgatatcacccaatcaaaatg 12769624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 52404484 - 52404539
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||| ||||  ||||| || |||||||||||||||||||||||||||||    
T  52404484 ttaccctatcttgtttatggggtaatt-accctctcatgatatcaaccaatcaaaat 52404539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 11757222 - 11757152
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| ||||| || ||||||||||| |||| ||||| |  ||| ||||||||||||||||||||    
T  11757222 aggttttttctacattacactttcttatttagaaggta-tttacaccttcaagatatcaaccaatcaaaatg 11757152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 241
Target Start/End: Original strand, 46118145 - 46118176
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||    
T  46118145 ttaccctctcatgatatcaaccaatcaaaatg 46118176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 5328922 - 5328854
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| ||||||||||| |||| ||||| ||| ||||  |||| |||||||||||| |||||||||||    
T  5328922 gttttttttagattaccctctcttgtttagggggcatttacccct-tcatgatatcaatcaatcaaaatg 5328854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 21096654 - 21096710
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||||||||||  | || |||||||||||||||||||||||||||    
T  21096654 ttaccctctcttgtttagagggtaaat-actctctcatgatatcaaccaatcaaaatg 21096710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 25655678 - 25655734
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || ||||| |||||||||||| |||||||||||    
T  25655678 ttaccctttcttgtttagagggtaatt-accctttcatgatatcaatcaatcaaaatg 25655734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 35954238 - 35954294
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || ||||| |||||||||||||||||| |||||    
T  35954238 ttaccctctcttgtttagagggtaatt-accctatcatgatatcaaccaatcgaaatg 35954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 43846213 - 43846273
Alignment:
Q  180 tagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||||  ||||| |||| ||| ||| ||||||||| ||||||||||    
T  43846213 tagattaccctatcttatttaaggggta-tttatcctttcaagatatcaactaatcaaaatg 43846273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 43847810 - 43847739
Alignment:
Q  168 taaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| |||||||| |||| ||||| ||||| ||||||   ||| ||||||||||||||||||||    
T  43847810 taaggttttttctacattaccctctcttgtttag-gggta-tttacctcttcaagatatcaaccaatcaaaatg 43847739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 28814242 - 28814324
Alignment:
Q  83 ttatttagtctttggattgtgcgagaaattaatccaatgaaattttttcgacaaaccttaattctttgtatttgttataagtttcta 169  Q
    |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28814242 ttatttagtctttggattgtgcgagaaat----ccaatgaaattttttcgacaaaccttaattctttgtatttgttataagtttcta 28814324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 8941301 - 8941233
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8941301 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 8941233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 20352024 - 20352096
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20352024 aaggttttttctagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatg 20352096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 30823697 - 30823765
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30823697 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 30823765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 7489335 - 7489264
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7489335 aggttttttctagattaccctctcttatttagagggtattttaccctttcatgatatcaaccaatcaaaatg 7489264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 23417197 - 23417268
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23417197 aggtttttgctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 23417268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 54921451 - 54921380
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54921451 aggttttttctagattaccctctcttatttagagggtattttaccctctcataatatcaaccaatcaaaatg 54921380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 41039572 - 41039642
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41039572 ggttttttctagattaccctctcttatttagaaggtattttaccctctcatgatatcaaccaatcaaaatg 41039642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 4655040 - 4654973
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  4655040 ttttttctagattaccctatcttgtttagagggtattttaccctctcatgatatcaaccaattaaaat 4654973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 46719763 - 46719694
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46719763 ggttttttatagattaccctctcttatttagagggtattt-accctctcatgatatcaaccaatcaaaatg 46719694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 52449410 - 52449340
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  52449410 ggttttttctagattaccctctgttatttagaagatattttaccctctcatgatatcaaccaatcaaaatg 52449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 3033853 - 3033925
Alignment:
Q  168 taaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||||||| ||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||    
T  3033853 taaggttttttctagcttaccctctcttatttatatgatattttaccctctcatgatatcaaccaatcaaaat 3033925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 13530035 - 13530102
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  13530035 ttttttctagattaccctatcttgtttagagggta-tttaccctctcatgatataaaccaatcaaaatg 13530102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 47805597 - 47805664
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||    
T  47805597 ttttttctagattaccctatcttgtttagaggatattt-accctctcatgatatcaaccaatcaaaatg 47805664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 49875792 - 49875724
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  49875792 ttttttttagattaccctctcttgtttagagggtattttaccttctcatgatatcaaccaatcaaaatg 49875724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 16666732 - 16666665
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  16666732 ttttttcaagattaccctctcttatttagaaggtattt-accctctcatgatatcaaccaatcaaaatg 16666665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 28172149 - 28172216
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28172149 ttttttttaaattacactatcttatttagagggtattt-accctctcatgatatcaaccaatcaaaatg 28172216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 4652798 - 4652856
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  4652798 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 4652856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 41041661 - 41041603
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  41041661 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 41041603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 43304920 - 43304851
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  43304920 ggttttttttagattaccctctcttgtttagagggtattt-accctttcatgatatcaaccaatcaaaatg 43304851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 7487074 - 7487131
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  7487074 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 7487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 47649398 - 47649468
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||  ||| ||||||||||||||||||||    
T  47649398 aggttttttctacattaccctatcttgtttagagggta-tttaccccttcaagatatcaaccaatcaaaatg 47649468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 17363110 - 17363040
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||| ||||||||||| | ||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  17363110 ggttgtttttagattaccctcttttatttaaaggatattttaccctctcatgatatcaatcaatcaaaatg 17363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 52447211 - 52447269
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  52447211 attatcctctcttatttagagggtaatttaccctctcatgatatcaatcaatcaaaatg 52447269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 9366912 - 9366953
Alignment:
Q  200 agagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9366912 agagggtattttaccctctcatgatatcaaccaatcaaaatg 9366953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 23419524 - 23419467
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  23419524 ttaccctctcttgtttagagggtaatttaccatctcatgatatcaaccaatcaaaatg 23419467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 31289460 - 31289526
Alignment:
Q  174 tttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| |||||||| |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||    
T  31289460 tttttttagattactctatcttatttagaaggta-tttatcctctcatgatatcaaccaattaaaatg 31289526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 7489417 - 7489375
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtatttta 212  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  7489417 aggttttttctagattaccctctcttatttagagggtatttta 7489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 23931593 - 23931658
Alignment:
Q  175 ttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||| |||| ||||||||||| ||||| |||| ||||||||||| ||||||||||    
T  23931593 ttttctagattaccctctcttgtttagagggta-tttactctcttatgatatcaacaaatcaaaatg 23931658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 49970442 - 49970384
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| | |||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  49970442 attaccttctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatg 49970384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 17360974 - 17361031
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||| ||||||||||||||||||| ||||||    
T  17360974 ttaccctctcttgtttagagggtaatttaccatctcatgatatcaaccaattaaaatg 17361031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 20354292 - 20354236
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  20354292 ttaccctctcttgtttagagggtaatttacc-tctcatgatatcaaccaatcaaaatg 20354236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 20787258 - 20787202
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||||||| || |||||||||||||||||||||||||||||||||    
T  20787258 ttaccctctcttgtttagagg-taatttaccctctcatgatatcaaccaatcaaaatg 20787202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 31292818 - 31292762
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  31292818 ttaccctctcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatg 31292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 34072866 - 34072922
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  34072866 ttaccctctcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatg 34072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 10659236 - 10659166
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||| |||||||| |||| ||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  10659236 aaggttttttctacattaccctctcttgtttagagagta-tttaccct-tcaagatatcaaccaatcaaaatg 10659166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 10873381 - 10873311
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||| |||||||| |||| ||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  10873381 aaggttttttctacattaccctctcttgtttagagagta-tttaccct-tcaagatatcaaccaatcaaaatg 10873311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 17518858 - 17518925
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| |||| |||||| |||| ||||||||||||||||| ||  |||||||||||    
T  17518858 ttttttctagattaccctctcttgtttagacggta-tttaccctctcatgataccagtcaatcaaaatg 17518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 31309420 - 31309482
Alignment:
Q  178 tctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| |||||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||||    
T  31309420 tctacattaccctctcttgtttagggggtaatt-accctctcatgatatcaaccaatcaaaatg 31309482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 43940457 - 43940386
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||||||| |||| ||||||||||| |||||||  | | |||||||| |||||||||||    
T  43940457 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatg 43940386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 7113930 - 7113861
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||  |||||||| |||| ||||||||||| |||||||  ||| ||||||||||||||||||||    
T  7113930 ggttttttctgcattaccctctcttgtttagagggta-tttaccccttcaagatatcaaccaatcaaaatg 7113861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 13534782 - 13534725
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| || || |||||||||||||||||||||||||||    
T  13534782 attaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatg 13534725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 16664495 - 16664552
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatga 242  Q
    ||||||| |||| |||||||| || || |||||||||||||||||||||||||||||||    
T  16664495 ttaccctctcttgtttagaggataatt-accctctcatgatatcaaccaatcaaaatga 16664552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 19869707 - 19869776
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||| ||| |||| |||| ||||||||| ||||| ||| ||||||||||||||||||||    
T  19869707 ggttttttctacattatcctctcttgtttatagggtattt-accctttcaagatatcaaccaatcaaaatg 19869776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 34075036 - 34074967
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| || |||| |||| || ||||||  |||| ||||||||||||||||||||||||    
T  34075036 ggttttttctagattactctctcttgtttaaagtgtatttacccct-tcatgatatcaaccaatcaaaatg 34074967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 38623680 - 38623619
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||| ||||||||||| |||||||| ||| |||||||| |||||||||||    
T  38623680 ctagattaccctctcttgtttagagggta-tttaccctttcaagatatcaatcaatcaaaatg 38623619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 23933772 - 23933716
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| ||||||||||| || ||| ||||||||||||||||||| ||||||    
T  23933772 ttaccctatcttgtttagagggtaatt-accatctcatgatatcaaccaattaaaatg 23933716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 24577986 - 24577922
Alignment:
Q  174 tttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 239  Q
    |||||||| |||||||| |||| |||| ||||||||| ||||| ||| ||||||||||||||||||    
T  24577986 tttttctacattaccctctcttgtttatagggtattt-accctttcaagatatcaaccaatcaaaa 24577922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 47650856 - 47650796
Alignment:
Q  178 tctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 239  Q
    |||||||||||||||||||||||| ||||| |||||||| | | |||| |||||||||||||    
T  47650856 tctagattaccctatcttatttagggggta-tttacccttttaagatagcaaccaatcaaaa 47650796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 42180267 - 42180221
Alignment:
Q  194 ttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||    
T  42180267 ttatttagagggtatttatccct-tcatgatatcaaccaatcaaaatg 42180221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 14270173 - 14270105
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||  ||||||| |||| ||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  14270173 ggttttttctacgttaccctctcttgtttagggggtattt-accct-tcaagatatcaaccaatcaaaatg 14270105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 20785168 - 20785198
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||||||||||||||||    
T  20785168 ttaccctctcatgatatcaaccaatcaaaat 20785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 26923889 - 26923820
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| |||| |||||||| || ||||||   ||| ||||||||||||||||||||    
T  26923889 ggttttttctacattaccctctcttgtttagaggata-tttaccacttcaagatatcaaccaatcaaaatg 26923820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 27956538 - 27956595
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| | ||||| |||||| |||||||||||||||||| |||||||||||    
T  27956538 attaccctctcttgtctagagtgtattt-accctctcatgatatcaatcaatcaaaatg 27956595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 31624747 - 31624682
Alignment:
Q  175 ttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||  ||||||| |||||||||||||||| |||||||| | | ||||| ||||||||||||||    
T  31624747 ttttctactttaccctctcttatttagagggta-tttacccttttaagatattaaccaatcaaaatg 31624682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 48952784 - 48952845
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||| | |||| ||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  48952784 ctagattaccttctcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatg 48952845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 17520147 - 17520091
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || | |||||||||||||||| |||||||||||    
T  17520147 ttaccctctcttgtttagagggtaatt-atcctctcatgatatcaatcaatcaaaatg 17520091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 19871300 - 19871241
Alignment:
Q  180 tagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||| ||||||||||| |||||||| |||  |||||||||||||||||||    
T  19871300 tagattaccctctcttgtttagagggta-tttaccctttca-aatatcaaccaatcaaaatg 19871241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 35046287 - 35046221
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||| | ||| |||| ||||||||||||||  |||||  ||||||||||||||||||||||    
T  35046287 ttttttttagatcatcctctcttgtttagagggtatttatccctc--atgatatcaaccaatcaaaatg 35046221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 49873561 - 49873617
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||||| |||| || || |||||||||||||||||||||||||||    
T  49873561 ttaccctctcttttttagatggtaatt-actctctcatgatatcaaccaatcaaaatg 49873617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 50496347 - 50496291
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||| ||||| || ||||||| ||||||||||||||||||||||    
T  50496347 ttaccctctcttgtttagggggtaatt-accctctaatgatatcaaccaatcaaaatg 50496291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 7111062 - 7111117
Alignment:
Q  185 taccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| |||| ||||||||||| |||||||| ||| ||||||||| ||||||||||    
T  7111062 taccctctcttgtttagagggta-tttaccctttcaagatatcaactaatcaaaatg 7111117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 4621484 - 4621552
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4621484 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 4621552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 16097683 - 16097612
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16097683 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 16097612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 3703167 - 3703238
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3703167 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatg 3703238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 26965363 - 26965434
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26965363 aggttttttctaaattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 26965434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 278801 - 278731
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  278801 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 278731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 637051 - 637121
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  637051 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 637121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 822854 - 822924
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  822854 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 822924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 17946583 - 17946653
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17946583 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaattaaaatg 17946653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 18957474 - 18957404
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18957474 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatg 18957404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 23345171 - 23345241
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23345171 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatg 23345241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 38059243 - 38059312
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38059243 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 38059312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 41182399 - 41182470
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41182399 aggttttttctagattatcctctcttatttagagggtattttaccctctcatgatatcaacaaatcaaaatg 41182470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 2081366 - 2081436
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  2081366 ggttttttctagattaccctatcttatttagagtgtattttaccttatcatgatatcaaccaatcaaaatg 2081436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 17852389 - 17852459
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  17852389 ggttttttctagattaccctctcatatttagagggtattttactctctcatgatatcaaccaatcaaaatg 17852459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 39860016 - 39859947
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  39860016 ggttttttctagattaccctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaatg 39859947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 15881233 - 15881301
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15881233 ttttttttagattactctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatg 15881301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 38576588 - 38576655
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  38576588 ttttttctagattaccctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaatg 38576655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 6096898 - 6096831
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  6096898 ttttttctagattaccctctcttatttagaggata-tttaccctctcataatatcaaccaatcaaaatg 6096831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 30475974 - 30476038
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaa 237  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||    
T  30475974 ttttttctagattaccctctcttgtttatagggtattttaccctcttatgatatcaaccaatcaa 30476038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 35019235 - 35019304
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| ||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||    
T  35019235 ggttttttctacattaccctatcttatttagagggtatttatccct-tcaagatatcaaccaatcaaaatg 35019304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 40618564 - 40618499
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaa 237  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||    
T  40618564 ggttttttctagattaccctatcttgtttagggggta-tttaccccctcatgatatcaaccaatcaa 40618499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 25583812 - 25583755
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  25583812 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 25583755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 27911894 - 27911951
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  27911894 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 27911951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 27958313 - 27958370
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  27958313 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 27958370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 40302412 - 40302483
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||| ||||  || |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  40302412 aaggttttttctatattattctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaatg 40302483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 276589 - 276647
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  276589 attaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatg 276647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 639260 - 639202
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  639260 attaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatg 639202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 825066 - 825008
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  825066 attaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatg 825008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 4622951 - 4622893
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  4622951 attaccctctcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatg 4622893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 41546921 - 41546848
Alignment:
Q  168 taaggtttttt-ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| ||||||||| || || |||||||||||||||| |||||||||| |||||||||||||||||||    
T  41546921 taaggttttttactagattactctctcctatttagagggtattt-accctctcatcatatcaaccaatcaaaatg 41546848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 44255961 - 44256023
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  44255961 ctaggttaccctctcttatttagaggataatttaccctctcatgatatcaaccaattaaaatg 44256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 17853482 - 17853425
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  17853482 ttaccctctcttgtttagagggtaatttactctctcatgatatcaaccaatcaaaatg 17853425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 38099331 - 38099263
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| |||||||| |||| |||||||||||||||| ||||| || ||||||| |||||||||||    
T  38099331 ttttttctaaattaccctctcttgtttagagggtattttatcctcttataatatcaatcaatcaaaatg 38099263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 45407245 - 45407312
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| ||| |||| ||||||||||| |||||||  ||||||||||||||||||||||||    
T  45407245 ttttttctagattatcctctcttgtttagagggta-tttaccccttcatgatatcaaccaatcaaaatg 45407312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 30112250 - 30112180
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||||||| |||||||||||    
T  30112250 aggttttttctagatgaccctctcttgtttagggagtattt-accctctcatgatatcaatcaatcaaaatg 30112180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 38060966 - 38060915
Alignment:
Q  190 tatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  38060966 tatcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatg 38060915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 39070377 - 39070307
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||| |||||||| ||||||| |||||| ||||| ||| ||||||||||||||||||||    
T  39070377 aggttttttctacattatcctatcttgtttagagtgtattt-accctttcaagatatcaaccaatcaaaatg 39070307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 17948705 - 17948647
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| |||| ||||||||||||||||||||| ||||||    
T  17948705 attaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaattaaaatg 17948647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 42647373 - 42647305
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||| ||||||||||| | || ||||||||||||||  |||| |||||||||||||||||||||||    
T  42647373 ggttttttttagattaccctctattgtttagagggtatttacccct-tcatgatatcaaccaatcaaaat 42647305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 28084755 - 28084810
Alignment:
Q  176 tttctagattaccctatcttatttagagggtattttaccctctcatgatatcaacca 232  Q
    |||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  28084755 tttctaaattaccctatcttgtttagggggtattt-accctctcatgatatcaacca 28084810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 39857878 - 39857926
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  39857878 tcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaat 39857926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 18955120 - 18955163
Alignment:
Q  198 ttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  18955120 ttagagggtaatttatcctctcatgatatcaaccaatcaaaatg 18955163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 15825071 - 15825136
Alignment:
Q  175 ttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||| ||||||||| ||| ||||| ||||| ||| ||||||||||||||||||||    
T  15825071 ttttctacattaccctctcttatttataggatattt-accctttcaagatatcaaccaatcaaaatg 15825136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 41671546 - 41671489
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaa 237  Q
    ||||||||||||||||| |||| |||||| |||||||| ||| ||||||||||||||||    
T  41671546 ctagattaccctatcttgtttatagggta-tttaccctttcaagatatcaaccaatcaa 41671489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 15883615 - 15883566
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||||||||    
T  15883615 tcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatg 15883566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 41544849 - 41544905
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||||| |||| || | ||||||||||||||||||||||||||||    
T  41544849 ttaccctatcttgtttagatggtaatt-atcctctcatgatatcaaccaatcaaaatg 41544905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 45409341 - 45409293
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  45409341 tcttatttatagggtaatt-accctctcatgatatcaaccaatcaaaatg 45409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 43129344 - 43129403
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 239  Q
    ||||| |||| |||||||||||||||||| ||||| || ||| ||||||||||||||||||    
T  43129344 ctagactaccttatcttatttagagggta-tttacgctttcaagatatcaaccaatcaaaa 43129403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 40304582 - 40304551
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||    
T  40304582 ttaccctctcatgatatcaaccaatcaaaatg 40304551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 2082465 - 2082423
Alignment:
Q  199 tagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||    
T  2082465 tagagagtaatttaccctctcatgatatcaatcaatcaaaatg 2082423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 13141478 - 13141448
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||||||||||||||||    
T  13141478 ttaccctctcatgatatcaaccaatcaaaat 13141448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 16095805 - 16095835
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||||||||||||||||    
T  16095805 ttaccctctcatgatatcaaccaatcaaaat 16095835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 3846520 - 3846568
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| || ||||||||||||||| ||||||||||||||    
T  3846520 tcttgtttagagggtaatt-accctctcatgatataaaccaatcaaaatg 3846568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 5588179 - 5588110
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||| || ||||  |||  ||||  ||||||| |||||||||||||||||||||||||    
T  5588179 gttttttttagattactctctcttgattaaggggtgatttaccccctcatgatatcaaccaatcaaaatg 5588110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 38577251 - 38577195
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| | |||||||||||||| || || |||||||||||||||||| ||||||||    
T  38577251 ttaccctcttttatttagagggtaatt-actctctcatgatatcaaccattcaaaatg 38577195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 38280257 - 38280329
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38280257 aaggttttttctagattaccctattttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 38280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 25225458 - 25225390
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25225458 ttttttttagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatg 25225390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 3904919 - 3904982
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaat 234  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3904919 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaat 3904982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 39965180 - 39965248
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  39965180 ttttttctggattaccctctcttatttagagggtattttattctctcatgatatcaaccaatcaaaatg 39965248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 75574 - 75641
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  75574 ttttttctagattaccctcttttatttagagggtattttaccttcttatgatatcaaccaatcaaaat 75641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 14004023 - 14004086
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaat 234  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  14004023 ggttttttttagattaccctctcttatttagagggtattttaccgtctcatgatatcaaccaat 14004086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 21191922 - 21191852
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  21191922 ggttttttctacattaccctctcttgtttagagggtattttaccctttcaagatatcaaccaatcaaaatg 21191852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 2290386 - 2290453
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  2290386 ttttttttagattaccctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaatg 2290453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 28389953 - 28390022
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| ||||||||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  28389953 aggttttttttagattaccctctcttatttagagggtatttta--ctctcatgatattaaccaatcaaaatg 28390022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 1053134 - 1053203
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  1053134 ggttttttctagattactctctcttgtttagagggtattt-accctctcatgatatcaacaaatcaaaatg 1053203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 15400992 - 15400924
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  15400992 gttttttttagattactctatcttgtttagagggtattt-accctatcatgatatcaaccaatcaaaatg 15400924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 3907106 - 3907048
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  3907106 attacactctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 3907048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 14006251 - 14006193
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||    
T  14006251 attaccctctcttgttaagagggtaatttaccctctcatgatatcaaccaatcaaaatg 14006193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 39067041 - 39067110
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||||||||| ||||||||||||||||| |||| |||||||||||||||| |||| ||||||    
T  39067041 ggttttttttagattacccaatcttatttagagggta-tttatcctctcatgatatcaatcaattaaaatg 39067110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 4736713 - 4736779
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| |||| ||  |||||||||||||||||||||||||||||||||| ||||||    
T  4736713 ttttttttagattaccctctcttgtt--gagggtattttaccctctcatgatatcaaccaattaaaatg 4736779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 3849795 - 3849861
Alignment:
Q  174 tttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| |||| |||| ||||||||| |  |||||||||||||||||||||||||||    
T  3849795 tttttctagattaccctctcttgtttaaagggtattt-atactctcatgatatcaaccaatcaaaatg 3849861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 38282463 - 38282406
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||| |||||||||||||||| |||||||||||    
T  38282463 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatg 38282406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 3851875 - 3851820
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||| ||||| || | |||||||||||||||||||||||||||    
T  3851875 ttaccctatcttatttagggggtaatt-agcctctcatgatatcaaccaatcaaaat 3851820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 7575696 - 7575628
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| |||| ||||| ||||||||   ||| ||||||||||||||||||||||||    
T  7575696 ggttttttctacattaccctctcttgtttagggggtattta--cctttcatgatatcaaccaatcaaaatg 7575628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 77799 - 77742
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||||| |||| |||| ||||||||||||||||| ||||||||||    
T  77799 ttaccctctcttgtttagaaggtaatttatcctctcatgatatcaacgaatcaaaatg 77742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 4738463 - 4738407
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| ||||||||||| || ||||||| ||||||| ||||||||||||||    
T  4738463 ttaccctatcttgtttagagggtaatt-accctcttatgatatgaaccaatcaaaatg 4738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 27551797 - 27551741
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || |||||||| |||||||||||||||||||||    
T  27551797 ttaccctctcttgtttagagggtaatt-accctctcctgatatcaaccaatcaaaatg 27551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 36603084 - 36603012
Alignment:
Q  168 taaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| |||||||| ||||||||| | |||| ||||| |  ||| ||||||||||||||||||||    
T  36603084 taaggttttttctacattaccctctcttatttaaaaggta-tttactccttcaagatatcaaccaatcaaaatg 36603012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 38932585 - 38932518
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| |||||||| |||| ||||||||||| ||||| |  ||| ||||||||||||||||||||    
T  38932585 ttttttctacattaccctctcttgtttagagggta-tttactccttcaagatatcaaccaatcaaaatg 38932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 518047 - 518108
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| ||||| | |||||| ||||| ||| |||||||| |||||||||||    
T  518047 ctagattaccctatcttgtttagggtgtattt-accctttcaagatatcaatcaatcaaaatg 518108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 3753008 - 3753072
Alignment:
Q  175 ttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| || | ||||| |||||||| ||||||||||||||||||||||||| ||||    
T  3753008 ttttttagattaccctctcctgtttag-gggtattt-accctctcatgatatcaaccaatcataatg 3753072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 18248725 - 18248664
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| ||||||| ||| ||||||   ||| ||||||||||||||||||||    
T  18248725 ctagattaccctatcttgtttagagagta-tttaccaattcaagatatcaaccaatcaaaatg 18248664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 37726118 - 37726063
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||  |||||||| ||||||||||||||| ||||||||||    
T  37726118 ttaccctctcttgtttagagg--attttaccttctcatgatatcaacaaatcaaaatg 37726063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 39159852 - 39159913
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||| ||||||| |||||| ||||| | | ||||||||||||||||||||    
T  39159852 ctagattaccctctcttgtttagagagtattt-acccttttaagatatcaaccaatcaaaatg 39159913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 39209342 - 39209281
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||| ||||||| |||||| ||||| | | ||||||||||||||||||||    
T  39209342 ctagattaccctctcttgtttagagagtattt-acccttttaagatatcaaccaatcaaaatg 39209281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 15152384 - 15152440
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || || ||||||| |||||||||||||||||||    
T  15152384 ttaccctctcttgtttagagggtaatt-actctctcataatatcaaccaatcaaaatg 15152440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 25223330 - 25223378
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||| ||||||||||| ||||||||||||||    
T  25223330 tcttgtttagagggtaatttacc-tctcatgatattaaccaatcaaaatg 25223378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 28392002 - 28391946
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||||||| || || |||||||||||||||||| |||||||||||    
T  28392002 ttaccctctcttgtttagaggataatt-accctctcatgatatcaatcaatcaaaatg 28391946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 33182918 - 33182850
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||| |||||||| | ||||||||| |||| |||||||  | | |||||||||||||||||||    
T  33182918 ggttttttctacattaccctcttttatttagatggta-tttacccctttaagatatcaaccaatcaaaat 33182850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 10455748 - 10455681
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| |||| ||| |||| ||||||||||||||  |||| ||| ||||||||||||| ||||||    
T  10455748 ttttttctacattatcctctcttgtttagagggtatttatccct-tcaagatatcaaccaattaaaatg 10455681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 24457845 - 24457908
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaa 237  Q
    ||||||||| |||||||| |||| ||||||||||| |||||||  ||| ||||| ||||||||||    
T  24457845 ttttttctacattaccctctcttgtttagagggta-tttaccccttcaagatattaaccaatcaa 24457908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 16273907 - 16273978
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16273907 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 16273978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 41338355 - 41338282
Alignment:
Q  168 taaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41338355 taaggttttttctagattaccctctcttatttagagggtattttaccttctcatgatatcaaccaatcaaaatg 41338282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 44456896 - 44456965
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44456896 gttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 44456965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 4861982 - 4861912
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4861982 ggttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatg 4861912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 723483 - 723552
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 239  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  723483 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaataaaaa 723552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 38179659 - 38179727
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 239  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38179659 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 38179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 40013623 - 40013691
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40013623 ttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatg 40013691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 47906947 - 47907015
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47906947 ttttttctagatttccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 47907015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 3412676 - 3412743
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3412676 ttttttctagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaat 3412743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 20122396 - 20122326
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  20122396 ggttttttctagattaccctctcttatttagagggtattttaccctctcattatatcaacctatcaaaatg 20122326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 33244606 - 33244670
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaat 234  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33244606 aggttttttctagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaat 33244670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 41856272 - 41856340
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||    
T  41856272 ttttttctagattaccctcttttatatagagggtattttaccctctcatgatatcaaccaatcaaaatg 41856340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 48950230 - 48950301
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  48950230 aggttttttctagattaccctctcttatataaagggtattttaccctctcatgatattaaccaatcaaaatg 48950301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 9659011 - 9659078
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  9659011 ttttttctagattaccctatcttgtttagagggta-tttaccctctcatgatataaaccaatcaaaatg 9659078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 46553435 - 46553503
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46553435 ttttttttagattatcctcttttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 46553503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 21817429 - 21817361
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  21817429 ggtttcttctatattaccctctcttatttagagggtattttacc--ctcatgatatcaaccaatcaaaatg 21817361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 23592537 - 23592607
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||| |||||||||||    
T  23592537 aggttttttctagattaccctctcttatttagagggta-tttatcctttcatgatatcaatcaatcaaaatg 23592607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 19063904 - 19063974
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| |||| |||||||| ||||||||||| ||| ||||||||||||||||||||    
T  19063904 ggttttttctacattaccctctcttgtttagaggatattttaccctttcaagatatcaaccaatcaaaatg 19063974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 41287553 - 41287622
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  41287553 ggttttttctagataaccctctcttgtttagagggtattt-accctctcatgatatcaactaatcaaaatg 41287622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 48684647 - 48684578
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||| || |||||||| | ||||||||||||||||||||||    
T  48684647 ggttttttctagattaccctctcttatttagaggata-tttacccttttatgatatcaaccaatcaaaatg 48684578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 20119885 - 20119942
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20119885 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 20119942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 725692 - 725636
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  725692 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaat 725636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 17286327 - 17286394
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  17286327 ttttttttagattaccctctcttgtttagagggtattt-accctctcatgatatcaatcaatcaaaatg 17286394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 4657018 - 4657082
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||||||||||||      |||||||||||||||||||||||    
T  4657018 ggttttttctagattaccctctcttatttagagggtatttta------catgatatcaaccaatcaaaatg 4657082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 4859584 - 4859641
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  4859584 ttaccctctcttgtttagagggtaatttaccctctcatcatatcaaccaatcaaaatg 4859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 16277724 - 16277675
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  16277724 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 16277675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 44459462 - 44459405
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  44459462 ttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatg 44459405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 47505746 - 47505679
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| |||| |||||||| || |||||||  ||||||||||||||||||||||||    
T  47505746 ttttttctagattaccctctcttgtttagaggata-tttaccccttcatgatatcaaccaatcaaaatg 47505679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 41336130 - 41336187
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||| |||||||||||||||| |||||||||||    
T  41336130 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatg 41336187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 41858712 - 41858655
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||| ||| ||||||    
T  41858712 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaactaattaaaatg 41858655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 40015830 - 40015786
Alignment:
Q  197 tttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  40015830 tttagagggtaatttaccctctcatgatatcaatcaatcaaaatg 40015786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 46555650 - 46555594
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||| |||| ||||||||||| |||| |||||||| ||||||||||||||||||    
T  46555650 ttaccctctcttgtttagagggtaatttatcctctcataatatcaaccaatcaaaat 46555594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 41405937 - 41406007
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||||||| |||| ||||| ||||||||  |||| ||| ||||||||||||||||||||    
T  41405937 aggttttttctacattaccctctcttgtttagggggtatttatccct-tcaagatatcaaccaatcaaaatg 41406007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 44884819 - 44884763
Alignment:
Q  181 agattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| || |||||||||||||||||||||||    |||||||||||||||||||||||    
T  44884819 agattactctctcttatttagagggtattttacc----catgatatcaaccaatcaaaatg 44884763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 9663758 - 9663701
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| || || |||||||||||||||||||||||||||    
T  9663758 attaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatg 9663701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 21737502 - 21737446
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  21737502 attaccctctcttatttag-gtgtattt-accctctcatgatatcaaccaatcaaaatg 21737446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 33246808 - 33246751
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| |||||||| || ||||| |||||||||||||||||||||||||||    
T  33246808 attaccctctcttgtttagagg-taatttactctctcatgatatcaaccaatcaaaatg 33246751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 47251966 - 47252035
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| |||| ||||| ||||| |||||||  ||| ||||||||||||||||||||    
T  47251966 ggttttttctacattaccctctcttgtttagggggta-tttaccccttcaagatatcaaccaatcaaaatg 47252035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 33982671 - 33982603
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||| |||||||| |||| ||||||||||| |||||||  ||| |||| ||||||||||||||    
T  33982671 ggttttttctacattaccctctcttgtttagagggta-tttaccccttcaagataccaaccaatcaaaat 33982603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 18995110 - 18995079
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||    
T  18995110 ttaccctctcatgatatcaaccaatcaaaatg 18995079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 38224340 - 38224406
Alignment:
Q  174 tttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||| ||||||| |||||||| |||||  |||| ||| ||||||||||||||||||||    
T  38224340 tttttctacattactctatcttgtttagaggatatttatccct-tcaagatatcaaccaatcaaaatg 38224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 44882577 - 44882639
Alignment:
Q  178 tctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| |||||||  |||| |||||||| || |||||||||| ||||||||||||||||||||||    
T  44882577 tctacattacccactcttgtttagagg-taatttaccctcttatgatatcaaccaatcaaaatg 44882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 47909478 - 47909447
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||    
T  47909478 ttaccctctcatgatatcaaccaatcaaaatg 47909447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 586238 - 586169
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| ||||| || |||||||||  ||||||||  |||| ||| ||||||||||||||||||||    
T  586238 ggttttttctacattactctctcttatttatggggtatttacccct-tcaagatatcaaccaatcaaaatg 586169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 8391439 - 8391508
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||||||| |||| ||||  ||||||||  ||| ||||||||||||| |||||||||||    
T  8391439 ggtttttcctagattaccctctcttgtttatggggtatttatccc-ctcatgatatcaaacaatcaaaatg 8391508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 37624215 - 37624154
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||| |||| ||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  37624215 ctagataaccctctcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatg 37624154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 38229833 - 38229776
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| | |||| |||||||||||||| ||||| ||| ||||||||||||||||||||    
T  38229833 attaccatctcttgtttagagggtattt-accctttcaagatatcaaccaatcaaaatg 38229776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 17968458 - 17968410
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||| || || |||| ||||||||||||||||||||||    
T  17968458 tcttatttagagggtaatt-acgctcttatgatatcaaccaatcaaaatg 17968410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 28588193 - 28588234
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttacc 214  Q
    |||||| ||||||| ||| |||||||||||||||||||||||    
T  28588193 ttttttttagattatcctctcttatttagagggtattttacc 28588234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 13243635 - 13243564
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13243635 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 13243564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 11123706 - 11123636
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11123706 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 11123636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 23022086 - 23022016
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23022086 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 23022016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 27330113 - 27330183
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330113 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 27330183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 8849751 - 8849822
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8849751 aggttttttctaggttaccctatcttatttagagggtattttaccatctcatgatatcaaccaatcaaaatg 8849822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 41695913 - 41695984
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  41695913 aggttttttctagattaccctatcttatttagaggttattttactctctcatgatatcaaccaatcaaaatg 41695984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 40908550 - 40908480
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40908550 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 40908480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 53583765 - 53583695
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  53583765 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatg 53583695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 37218168 - 37218237
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37218168 gttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 37218237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 2220039 - 2219967
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2220039 aaggttttttttagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatg 2219967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 27128228 - 27128160
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27128228 ttttttctagattaccctatcttatttagagggtattttactctatcatgatatcaaccaatcaaaatg 27128160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 44841226 - 44841294
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44841226 ttttttctagattaccgtctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 44841294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 50546473 - 50546541
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50546473 ttttttctagattaccctctcttatttatagggtattttaccctctcatgatatcaaccaatcaaaatg 50546541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 29894819 - 29894748
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29894819 aggttttttctagattatcctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatg 29894748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 45051738 - 45051807
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45051738 gttttttctagattatcctctcttatttagaggatattttaccctctcatgatatcaaccaatcaaaatg 45051807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 4230848 - 4230912
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaa 237  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4230848 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaactaatcaa 4230912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 47910953 - 47911021
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47910953 ttttttctagattatcctctcttatttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 47911021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 30438267 - 30438335
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  30438267 ttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaacaaattaaaatg 30438335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 37787322 - 37787254
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  37787322 ttttttttagattaccctctcttatttagagggtattttaccctcttatgatataaaccaatcaaaatg 37787254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 15082708 - 15082779
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| || |||||||||||    
T  15082708 aggttttttctagattatcctctcttatttagaaggtattttaccctctcatgatataaatcaatcaaaatg 15082779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 41103785 - 41103715
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  41103785 ggttttttctagatcaccatctcttatttagagggtattttaccctctcatgatatcaacaaattaaaatg 41103715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 45172763 - 45172705
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45172763 attaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatg 45172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 51720860 - 51720929
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  51720860 ggttttttctagattaccctctcttatttagagagta-tttaccctctcatgaaatcaaccaatcaaaatg 51720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 55219940 - 55219875
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 239  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  55219940 ttttttctagattaccctctcttatttagagggta-tttaccctctcatgatatcaaccaattaaaa 55219875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 22606906 - 22606837
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  22606906 ggttttttttagattatcctctcttatttagagggtattttaccctcttattatatcaaccaatcaaaat 22606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 53845139 - 53845196
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53845139 ttaccctctcttatttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 53845196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 50610660 - 50610588
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||| |||||||| || | ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  50610660 aaggttttttttagattactctcttttatttagagggtattttatcctctaatgatatcaaccaatcaaaatg 50610588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 18763975 - 18763909
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaa 237  Q
    ||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||||||||||||||    
T  18763975 aggttttttctagattaccttctcttatttagagggta-tttatcctctcatgatatcaaccaatcaa 18763909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 11121080 - 11121142
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  11121080 ctaggttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 11121142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 30043692 - 30043634
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  30043692 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 30043634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 31311666 - 31311735
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||| ||||||||||||||    
T  31311666 ggttttttctagattaccctctcttgtttagagcgtattt-accctctcatgatataaaccaatcaaaatg 31311735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 13213299 - 13213356
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  13213299 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 13213356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 37785292 - 37785349
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  37785292 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 37785349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 44843398 - 44843341
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  44843398 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 44843341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 38698867 - 38698800
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||    
T  38698867 ttttttttagattaccctctcttgtttagaggatattt-accctctcatgatatcaaccaatcaaaatg 38698800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 2217883 - 2217941
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| || ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  2217883 attactctctcttatttagaaggtaatttaccctctcatgatatcaaccaatcaaaatg 2217941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 27239267 - 27239205
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  27239267 ctaggttaccctcacttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 27239205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 52745654 - 52745724
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| ||||| ||||||||||||||||   |||||||| |||||||||| |||||||||||    
T  52745654 ggttttttctagatcaccctctcttatttagagggtaaaataccctcttatgatatcaatcaatcaaaatg 52745724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 4233248 - 4233191
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  4233248 ttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatg 4233191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 15084763 - 15084714
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  15084763 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 15084714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 22604724 - 22604781
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  22604724 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatg 22604781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 23019699 - 23019748
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  23019699 tcttatttagagggtaatttaccctctcatgatatcaaccaatcgaaatg 23019748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 27320873 - 27320922
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  27320873 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 27320922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 50535960 - 50536024
Alignment:
Q  176 tttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| |||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  50535960 tttctaaattaccctctcttgtttatagggtattt-accctctcatgatatcaaccaatcaaaatg 50536024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 50935460 - 50935528
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||| |||||||| |||| ||||||||||| |||||||| ||| |||||||||||||||||||    
T  50935460 ggttttttctacattaccctctcttgtttagagggta-tttaccctttcaagatatcaaccaatcaaaat 50935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 3890777 - 3890840
Alignment:
Q  177 ttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||| ||||||| ||| |||||||  ||||||||||||||||||||||||    
T  3890777 ttctagattaccctatcttgtttagagagta-tttaccccttcatgatatcaaccaatcaaaatg 3890840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 42828049 - 42827983
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 238  Q
    |||||||||||||||||| | | || |||||||||||||| |||||||||||||||||| ||||||||    
T  42828049 ggttttttctagattaccatcttttgtttagagggtattt-accctctcatgatatcaatcaatcaaa 42827983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 43338222 - 43338284
Alignment:
Q  178 tctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  43338222 tctacattacccaatcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatg 43338284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 36465585 - 36465654
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| | |||  |||||||||||||||||||    
T  36465585 ggttttttctagattaccctctcttgtttagagggta-tttaccttttcaacatatcaaccaatcaaaatg 36465654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 40906007 - 40906065
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| ||||||||||| |||||| ||||||||||||||    
T  40906007 attaccctctcttgtttagagggtaatttaccctctcgtgatattaaccaatcaaaatg 40906065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 6177403 - 6177354
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  6177403 tcttgtttagagggtaatttaccctctcatgatatcaactaatcaaaatg 6177354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 8852350 - 8852293
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||||||| || ||||| |||||||||||||||||||||||||||    
T  8852350 ttaccctctcttgtttagaggataatttactctctcatgatatcaaccaatcaaaatg 8852293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 37220306 - 37220249
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||  ||||||||||||||||||||||||||    
T  37220306 ttaccctctcttgtttagagggtaatttactatctcatgatatcaaccaatcaaaatg 37220249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 41101517 - 41101574
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| ||||||||||||| || |||||| |||||||||||||| |||||||||||    
T  41101517 ttaccctctcttatttagaggataatttaccttctcatgatatcaatcaatcaaaatg 41101574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 42825876 - 42825925
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||||||||||||||||||||| ||||||||    
T  42825876 tcttgtttagagggtaatttaccctctcatgatatcaaccagtcaaaatg 42825925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 30361644 - 30361711
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||| |||||| |||||||  |||| | ||||||||||||||| ||||||    
T  30361644 ttttttctagattaccctatcttgtttagaaggtatttatccct-taatgatatcaaccaattaaaatg 30361711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 47913155 - 47913099
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||| |||| ||||||||||| ||||| |||||| |||||||||||||||||||    
T  47913155 ttaccctctcttttttagagggtaatttactctctcaagatatcaaccaatcaaaat 47913099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 54410763 - 54410696
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||   | ||||||||||||||||||||    
T  54410763 ttttttctagattaccctatcttgtttagagggtatttacccctaaaa-gatatcaaccaatcaaaatg 54410696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 55413232 - 55413165
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| |||| ||||  |||||||| | ||||| ||||||||||||||||||||||    
T  55413232 ttttttctagattaccctttcttgtttaaggggtattt-atcctcttatgatatcaaccaatcaaaatg 55413165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 32001286 - 32001225
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||||||||| ||||| |||||||| |||  |||||||||||||||||||    
T  32001286 ctagattaccctctcttatttagggggta-tttaccctttcaaaatatcaaccaatcaaaatg 32001225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 37178242 - 37178311
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| |||| ||||||| |||||   |||| ||||||||||||||||||||||||    
T  37178242 ggttttttctaaattaccctctcttgtttagagcgtattaacccct-tcatgatatcaaccaatcaaaatg 37178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 18410065 - 18410122
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| ||||||||| ||| || ||||  |||||||||||||||||||||||||||    
T  18410065 ttaccctctcttatttaaaggataatttattctctcatgatatcaaccaatcaaaatg 18410122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 45169828 - 45169885
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  45169828 ttaccctctcttttttagagggtaatttactctctcataatatcaactaatcaaaatg 45169885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 50548694 - 50548637
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||||| |||| |||| | ||||||||||||||||||||||||||    
T  50548694 ttaccctctcttgtttagatggtaatttatcatctcatgatatcaaccaatcaaaatg 50548637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 10825749 - 10825816
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||||||| |||| ||||| ||||| ||| |||||||||||||| ||||||| ||||||    
T  10825749 ttttttttagattaccctctcttgtttagggggta-tttgccctctcatgatattaaccaatgaaaatg 10825816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 22981466 - 22981399
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaa 239  Q
    ||||||||||| |||||||| |||| |||||||| || |||||||  ||| ||||||||||||||||||    
T  22981466 ggttttttctacattaccctgtcttgtttagaggata-tttaccccttcaagatatcaaccaatcaaaa 22981399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 53776402 - 53776469
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| ||| | ||||||||  ||||||| ||| ||||||||||||||||||| ||||||    
T  53776402 ttttttctagattatcctcttttatttaggaggtattt-accatctcatgatatcaaccaattaaaatg 53776469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 30440460 - 30440429
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||    
T  30440460 ttaccctctcatgatatcaaccaatcaaaatg 30440429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 241
Target Start/End: Original strand, 38235378 - 38235409
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||    
T  38235378 ttaccctctcatgatatcaaccaatcaaaatg 38235409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 41698285 - 41698234
Alignment:
Q  190 tatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| |||||| ||||  ||| ||||||||||||||||||||||||||||    
T  41698285 tatcttgtttagaaggtaacttatcctctcatgatatcaaccaatcaaaatg 41698234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 54409366 - 54409428
Alignment:
Q  178 tctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| ||||| ||||| |||||| | ||| ||||| ||||||||||||||    
T  54409366 tctagattaccctatcttgtttagggggta-tttaccttttcaagatataaaccaatcaaaatg 54409428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 18412139 - 18412109
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||||||||||||||||    
T  18412139 ttaccctctcatgatatcaaccaatcaaaat 18412109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 22977835 - 22977896
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||| ||||| |||||||| ||||| | | ||||||||||||||||||||    
T  22977835 ctagattaccctctcttgtttagggggtattt-acccttttaagatatcaaccaatcaaaatg 22977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 39129070 - 39129126
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||| ||||||||||| |||||||| | | ||||||||||||||||||||    
T  39129070 attaccctatcttgtttagagggta-tttaccct-ttaagatatcaaccaatcaaaatg 39129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 22731373 - 22731442
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||| || ||||  |||  ||||  ||||||| |||||||||||||||||||||||||    
T  22731373 gttttttttagattactctctcttgattaaggggtgatttaccccctcatgatatcaaccaatcaaaatg 22731442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 3892883 - 3892828
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||| |||| ||||||||||| || || ||||||||||||||| ||||||||||    
T  3892883 ttaccctctcttgtttagagggtaatt-acactctcatgatatcaatcaatcaaaat 3892828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 48071719 - 48071790
Alignment:
Q  168 taaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    ||||||||||| || |||||||| |||| |||||  ||||||| ||||| | | |||||||||||||||||||    
T  48071719 taaggttttttttacattaccctctcttgtttaggaggtattt-acccttttaagatatcaaccaatcaaaat 48071790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 16922318 - 16922248
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16922318 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 16922248  T

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Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 17557572 - 17557642
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17557572 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 17557642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 14106008 - 14105938
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14106008 ggttttttctagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatg 14105938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 4587860 - 4587931
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  4587860 aggttttttctagattaccctctcttatttagaggatattttaccctctcatgatatcaaccaattaaaatg 4587931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 23582283 - 23582213
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  23582283 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaattaaaatg 23582213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 27784495 - 27784425
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27784495 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaataaaaatg 27784425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 953654 - 953722
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  953654 ttttttctagattactctattttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 953722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 5686338 - 5686406
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||| | || ||||||||||||||| | |||||||||||||||||||||||||||    
T  5686338 gttttttctagattaccctcttttgtttagagggtatttt-ctctctcatgatatcaaccaatcaaaatg 5686406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 11837846 - 11837789
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  11837846 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 11837789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 23580091 - 23580148
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  23580091 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 23580148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 27782272 - 27782329
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  27782272 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 27782329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 11154882 - 11154825
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  11154882 ttaccctttcttatttaaagggtaatttagcctctcatgatatcaaccaatcaaaatg 11154825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 14103797 - 14103854
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  14103797 ttaccctctcttgtttagagggtaatttaccctctcacgatatcaaccaatcaaaatg 14103854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 17551076 - 17551019
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  17551076 ttaccctctcttgtttaaagggtaatttaccctctcatgatatcaaccaatcaaaatg 17551019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 28581025 - 28580959
Alignment:
Q  174 tttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||| ||||||||||| |||| |||||||||||||| | ||||||||||||| ||||||||||||||    
T  28581025 tttttttagattaccctctcttgtttagagggtattt-atcctctcatgatataaaccaatcaaaatg 28580959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 4590070 - 4590013
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||| ||||| |||||    
T  4590070 ttaccctctcttatttagagggtaatttatcctctcatgatatcaatcaatccaaatg 4590013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 24083004 - 24083060
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  24083004 ttaccctctcttatttagagggtaatt-accctctcatgatatcaaccaatcataatg 24083060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 27438218 - 27438275
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||| | ||||||||||||||||||||||||||    
T  27438218 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatg 27438275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 25109367 - 25109415
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  25109367 tcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatg 25109415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 13866014 - 13866081
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| ||||||||||||| |||  |||||| |||||||  ||| ||||||||||||||||||||    
T  13866014 ggttttttctatattaccctatcttgttt--agggta-tttacccgttcaagatatcaaccaatcaaaatg 13866081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 28578430 - 28578487
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| || || ||||||| |||||||||||||||||||    
T  28578430 attaccctctcttctttagagggtaatt-actctctcattatatcaaccaatcaaaatg 28578487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 39590786 - 39590716
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39590786 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 39590716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 9593904 - 9593835
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9593904 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 9593835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 37938494 - 37938562
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37938494 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 37938562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 822818 - 822888
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  822818 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaatcaaaatg 822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 12501478 - 12501408
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12501478 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcagccaatcaaaatg 12501408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 30128626 - 30128695
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30128626 gttttttctagattaccctctcttatttagagggtattttacgctctcatgatatcaaccaatcaaaatg 30128695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 27018120 - 27018192
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  27018120 aaggttttttctagattaccctctcttatttagaaggtattttaccctcttatgatatcaaccaatcaaaatg 27018192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 744072 - 744142
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  744072 ggttttttctagattatcctctcttatttagagggtattttaccctctcatgatatcaaccaattaaaatg 744142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 20544189 - 20544258
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaat 240  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20544189 ggttttttctagattatcctctcttatttagagggtattttaccctctcatgatattaaccaatcaaaat 20544258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 19666697 - 19666627
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  19666697 ggttttttctagattaccctctctaatttagaaggtattttaccctctcatgatataaaccaatcaaaatg 19666627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 31547465 - 31547534
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  31547465 gttttttctagattaccctttcttgtttagagggtattttaccccttcatgatatcaaccaatcaaaatg 31547534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 42609905 - 42609974
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| ||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42609905 ggttttttttagattact-tctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 42609974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 9591612 - 9591675
Alignment:
Q  178 tctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  9591612 tctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 9591675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 27020277 - 27020219
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  27020277 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 27020219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 745796 - 745739
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  745796 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 745739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 7179660 - 7179728
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||  ||||||||||||||||||||||||    
T  7179660 gttttttctagattaccctctcttgtttagagggta-tttaccccttcatgatatcaaccaatcaaaatg 7179728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 15527483 - 15527420
Alignment:
Q  177 ttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||    
T  15527483 ttctagattaccctctcttgtttagagggtattt-accctcttatgatatcaaccaatcaaaatg 15527420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 29391046 - 29390984
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||| |||||||||||||||||||| ||| ||| ||||||||||||||||    
T  29391046 ctagattaccctctcttgtttagagggtattttaccctttcaagatttcaaccaatcaaaatg 29390984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 12499226 - 12499283
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||    
T  12499226 ttaccctcttttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 12499283  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 19664770 - 19664827
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||    
T  19664770 ttaccctctattgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 19664827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 37272777 - 37272717
Alignment:
Q  180 tagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||||||    
T  37272777 tagattaccctattttgtttagagggtattt-accctctcatgatatcagccaatcaaaatg 37272717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 37940176 - 37940127
Alignment:
Q  192 tcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  37940176 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatg 37940127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 42612451 - 42612394
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  42612451 ttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatg 42612394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 19505118 - 19505048
Alignment:
Q  170 aggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||  ||||||||||| |||| |||||||||||||| ||||||||||||||||||  ||||||||||    
T  19505118 aggtttttcatagattaccctctcttgtttagagggtattt-accctctcatgatatcaattaatcaaaatg 19505048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 20546387 - 20546329
Alignment:
Q  183 attaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| | || ||||||||||| ||||| |||||||||||||||||||||||||||    
T  20546387 attaccctcttttgtttagagggtaatttacactctcatgatatcaaccaatcaaaatg 20546329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 27552738 - 27552669
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||| || | || ||||||||||||||  |||| ||||||||||||||||||||||||    
T  27552738 ggttttttctagattactctcttttgtttagagggtatttatccct-tcatgatatcaaccaatcaaaatg 27552669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 39588266 - 39588323
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||| |||||||| |||||||||||||||||||    
T  39588266 ttaccctctcttgtttagagggtaatttatcctctcataatatcaaccaatcaaaatg 39588323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 6720955 - 6720888
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| ||||||||||||| ||||||||||||||  |||| ||| |||||||| |||||||||||    
T  6720955 ttttttctacattaccctatcttgtttagagggtatttatccct-tcaagatatcaatcaatcaaaatg 6720888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 11986659 - 11986593
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||| ||||||| ||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  11986659 ttttttttagattatcctttcttatttagagg-tattt-accatctcatgatatcaaccaatcaaaatg 11986593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 5099856 - 5099917
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| |||| ||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  5099856 ctagattaccctctcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatg 5099917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 9985359 - 9985428
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| |||| ||||||||||| ||||| |  ||||||||||||| ||||||||||    
T  9985359 ggttttttctaaattaccctctcttgtttagagggta-tttactcattcatgatatcaactaatcaaaatg 9985428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 15527348 - 15527279
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| ||||| || |||| | |||||||||||| ||||| ||| ||||||||||||||||||||    
T  15527348 ggttttttctacattactctctcttgtctagagggtattt-accctttcaagatatcaaccaatcaaaatg 15527279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 29388962 - 29389031
Alignment:
Q  172 gttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||| ||||| || |||| |||||||  ||||||||||| ||| ||| ||||||||||||||||    
T  29388962 gttttttctacattactctctcttgtttagagaatattttaccctttcaagatttcaaccaatcaaaatg 29389031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 34401523 - 34401579
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || || |||||||||||||||||||||||||||    
T  34401523 ttaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatg 34401579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 34663635 - 34663579
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| ||||||||||  |||| || ||||||||||||||||||||||||||||||    
T  34663635 ttaccctctcttatttaggaggtaatt-accctctcatgatatcaaccaatcaaaatg 34663579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 7181259 - 7181216
Alignment:
Q  197 tttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| || ||||||||||||||||||||||||||||||    
T  7181259 tttagagggtaatt-accctctcatgatatcaaccaatcaaaatg 7181216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 34402222 - 34402156
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||| |||||| | |||| |||||||| ||||| ||||||| ||||||||||||||||||||||    
T  34402222 ttttttctaaattacc-tctcttgtttagaggatattt-accctcttatgatatcaaccaatcaaaatg 34402156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 3033069 - 3033135
Alignment:
Q  174 tttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||| |||||||| |||| ||||||||||| |||||||  |||  |||||||||||||||||||    
T  3033069 tttttctacattaccctctcttgtttagagggta-tttaccccttcaaaatatcaaccaatcaaaatg 3033135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 241
Target Start/End: Original strand, 27550636 - 27550667
Alignment:
Q  210 ttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||||||||||||||||||||||||    
T  27550636 ttaccctctcatgatatcaaccaatcaaaatg 27550667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 15524119 - 15524180
Alignment:
Q  179 ctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||| | |||| |||||||| ||||| ||||| ||| ||||||||||||||||||||    
T  15524119 ctagattaccttctcttgtttagaggatattt-accctttcaagatatcaaccaatcaaaatg 15524180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 37270252 - 37270308
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| || ||||| | ||||||||||||||||||||||    
T  37270252 ttaccctctcttgtttagagggtaatt-accctattatgatatcaaccaatcaaaatg 37270308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 30755 - 30687
Alignment:
Q  173 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30755 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaataaaaatg 30687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 20729 - 20786
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  20729 ttaccctatcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatg 20786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0779 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 217 - 147
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  217 ggttttttctatattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 56561 - 56491
Alignment:
Q  171 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  56561 ggttttttctagattaccctctcttatttagagggtattttaccctcccatgatatcaaccaatcaaaatg 56491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 3858 - 3929
Alignment:
Q  169 aaggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||  |||||||||||| |||||||||||    
T  3858 aaggttttttctagattaccctctcttgtttagagggta-tttaccccttcatgatatcaatcaatcaaaatg 3929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 5936 - 5884
Alignment:
Q  188 cctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||||||| |||| ||| || ||||||| ||||||||||||||||||||||    
T  5936 cctatcttattcagagagtaatt-accctcttatgatatcaaccaatcaaaatg 5884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 49144 - 49087
Alignment:
Q  184 ttaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatg 241  Q
    ||||||| |||| ||||||||||| |||| | ||||||||||||||||||||||||||    
T  49144 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatg 49087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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