View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16905_low_16 (Length: 391)

Name: NF16905_low_16
Description: NF16905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16905_low_16
NF16905_low_16
[»] chr3 (59 HSPs)
chr3 (2-388)||(16743991-16744378)
chr3 (14-338)||(13838905-13839232)
chr3 (1-338)||(14842487-14842826)
chr3 (1-264)||(17912483-17912746)
chr3 (1-338)||(2049808-2050147)
chr3 (2-338)||(12030073-12030411)
chr3 (2-301)||(15858986-15859288)
chr3 (202-386)||(19231982-19232169)
chr3 (99-264)||(2449238-2449404)
chr3 (3-274)||(51158008-51158281)
chr3 (2-257)||(15936634-15936891)
chr3 (218-338)||(19260749-19260869)
chr3 (1-257)||(15938476-15938734)
chr3 (132-264)||(13975722-13975853)
chr3 (132-264)||(45860937-45861068)
chr3 (132-264)||(13954890-13955021)
chr3 (303-381)||(15857120-15857198)
chr3 (306-386)||(3992873-3992953)
chr3 (306-386)||(55513193-55513273)
chr3 (2-339)||(15614833-15615170)
chr3 (306-386)||(2844514-2844594)
chr3 (306-386)||(54037976-54038056)
chr3 (306-386)||(17955832-17955916)
chr3 (306-386)||(7854305-7854385)
chr3 (2-230)||(16821138-16821369)
chr3 (132-252)||(55316351-55316471)
chr3 (306-367)||(45581954-45582016)
chr3 (2-112)||(47984649-47984759)
chr3 (2-112)||(48003223-48003333)
chr3 (132-252)||(41270207-41270327)
chr3 (2-112)||(47993936-47994046)
chr3 (2-112)||(48012509-48012619)
chr3 (207-248)||(14080715-14080756)
chr3 (322-379)||(17205019-17205076)
chr3 (306-379)||(38810868-38810941)
chr3 (324-379)||(12031849-12031904)
chr3 (185-338)||(54651642-54651796)
chr3 (306-379)||(13301323-13301396)
chr3 (306-379)||(13311979-13312052)
chr3 (322-379)||(17191879-17191936)
chr3 (306-338)||(2449152-2449184)
chr3 (306-338)||(16261777-16261809)
chr3 (306-338)||(16933869-16933901)
chr3 (306-338)||(17912398-17912430)
chr3 (306-338)||(23492696-23492728)
chr3 (306-338)||(38168237-38168269)
chr3 (306-338)||(53771365-53771397)
chr3 (2-120)||(12264932-12265050)
chr3 (322-379)||(3576290-3576347)
chr3 (307-372)||(15550922-15550987)
chr3 (306-338)||(11986080-11986112)
chr3 (185-257)||(11986173-11986245)
chr3 (306-338)||(13954804-13954836)
chr3 (306-338)||(14285289-14285321)
chr3 (306-338)||(19947026-19947058)
chr3 (306-338)||(30153265-30153297)
chr3 (306-338)||(33342204-33342236)
chr3 (306-338)||(45861122-45861154)
chr3 (306-338)||(51961031-51961063)
[»] chr8 (36 HSPs)
chr8 (2-264)||(22907214-22907477)
chr8 (2-386)||(16404852-16405236)
chr8 (3-338)||(16193643-16193979)
chr8 (14-338)||(24928716-24929043)
chr8 (2-338)||(43373392-43373732)
chr8 (99-264)||(5238184-5238350)
chr8 (99-264)||(24661248-24661414)
chr8 (99-264)||(43685643-43685809)
chr8 (1-264)||(17345568-17345832)
chr8 (2-252)||(6774258-6774510)
chr8 (2-252)||(24548981-24549233)
chr8 (306-386)||(274766-274846)
chr8 (306-386)||(641003-641083)
chr8 (306-386)||(826809-826889)
chr8 (306-386)||(24716714-24716794)
chr8 (132-248)||(21844576-21844692)
chr8 (132-248)||(21851969-21852085)
chr8 (132-252)||(30120854-30120974)
chr8 (306-386)||(39115598-39115678)
chr8 (132-252)||(16674392-16674512)
chr8 (20-114)||(23837214-23837308)
chr8 (322-379)||(17285543-17285600)
chr8 (322-379)||(21198005-21198062)
chr8 (306-338)||(5238404-5238436)
chr8 (306-338)||(22907128-22907160)
chr8 (306-338)||(24385652-24385684)
chr8 (306-338)||(24661162-24661194)
chr8 (306-338)||(43685863-43685895)
chr8 (2-189)||(222754-222944)
chr8 (2-189)||(736377-736567)
chr8 (2-189)||(860272-860462)
chr8 (207-248)||(23149985-23150026)
chr8 (207-248)||(23226076-23226117)
chr8 (306-338)||(2545265-2545297)
chr8 (306-338)||(3431176-3431208)
chr8 (306-338)||(22886654-22886686)
[»] chr4 (35 HSPs)
chr4 (2-264)||(26680200-26680463)
chr4 (2-386)||(54118120-54118508)
chr4 (2-338)||(13246429-13246769)
chr4 (1-338)||(15675009-15675354)
chr4 (132-338)||(122020-122226)
chr4 (99-264)||(10488659-10488825)
chr4 (99-264)||(16327926-16328092)
chr4 (67-338)||(10104170-10104449)
chr4 (1-237)||(31115627-31115865)
chr4 (202-338)||(33240901-33241043)
chr4 (132-264)||(13048221-13048353)
chr4 (306-386)||(25119059-25119139)
chr4 (2-248)||(10644218-10644467)
chr4 (306-386)||(5682380-5682460)
chr4 (232-338)||(31132545-31132657)
chr4 (2-101)||(111394-111493)
chr4 (2-252)||(47357653-47357906)
chr4 (67-248)||(40885570-40885753)
chr4 (306-379)||(41165808-41165881)
chr4 (1-48)||(10104449-10104496)
chr4 (20-114)||(41166083-41166177)
chr4 (322-379)||(47534933-47534990)
chr4 (306-338)||(14952085-14952117)
chr4 (306-338)||(15135907-15135939)
chr4 (306-338)||(15272211-15272243)
chr4 (306-338)||(16327840-16327872)
chr4 (306-338)||(16609013-16609045)
chr4 (306-338)||(26680517-26680549)
chr4 (27-114)||(15044851-15044938)
chr4 (1-114)||(8374506-8374619)
chr4 (306-338)||(8045272-8045304)
chr4 (207-247)||(13809511-13809551)
chr4 (50-114)||(13809647-13809711)
chr4 (306-338)||(16523146-16523178)
chr4 (3-114)||(52265645-52265757)
[»] chr1 (24 HSPs)
chr1 (1-388)||(41394220-41394609)
chr1 (2-338)||(20931344-20931682)
chr1 (2-338)||(20445678-20446019)
chr1 (2-338)||(20893551-20893890)
chr1 (2-338)||(20913036-20913367)
chr1 (2-338)||(37844374-37844715)
chr1 (2-338)||(20531443-20531783)
chr1 (99-264)||(51452589-51452755)
chr1 (1-337)||(22227807-22228146)
chr1 (1-337)||(22232504-22232843)
chr1 (2-252)||(2116253-2116506)
chr1 (306-386)||(21860334-21860414)
chr1 (306-380)||(44034829-44034903)
chr1 (132-339)||(45051554-45051759)
chr1 (272-379)||(27675086-27675191)
chr1 (306-386)||(41218728-41218808)
chr1 (132-252)||(5072388-5072508)
chr1 (132-252)||(18601118-18601238)
chr1 (322-379)||(13376711-13376768)
chr1 (322-379)||(20177513-20177570)
chr1 (306-337)||(15861327-15861358)
chr1 (207-248)||(22143361-22143402)
chr1 (2-81)||(22143531-22143611)
chr1 (306-338)||(51452809-51452841)
[»] scaffold0078 (3 HSPs)
scaffold0078 (2-264)||(37066-37329)
scaffold0078 (306-386)||(41632-41712)
scaffold0078 (306-338)||(36980-37012)
[»] chr7 (44 HSPs)
chr7 (2-264)||(7293016-7293279)
chr7 (2-379)||(3059965-3060344)
chr7 (5-338)||(16211768-16212103)
chr7 (8-338)||(11580661-11580997)
chr7 (2-338)||(13036938-13037278)
chr7 (2-338)||(36052666-36053003)
chr7 (99-264)||(11516324-11516490)
chr7 (99-264)||(15441564-15441730)
chr7 (99-264)||(30262129-30262295)
chr7 (2-264)||(47481031-47481295)
chr7 (2-257)||(18253842-18254099)
chr7 (2-263)||(13321013-13321278)
chr7 (1-246)||(16478968-16479215)
chr7 (132-264)||(25292338-25292470)
chr7 (306-386)||(32493898-32493978)
chr7 (306-386)||(126738-126818)
chr7 (132-248)||(13572808-13572924)
chr7 (306-386)||(1936869-1936949)
chr7 (136-336)||(295893-296094)
chr7 (306-386)||(111121-111201)
chr7 (132-252)||(10989541-10989661)
chr7 (133-253)||(2437590-2437710)
chr7 (272-379)||(13377819-13377924)
chr7 (140-252)||(13911024-13911136)
chr7 (307-386)||(7283908-7283987)
chr7 (222-264)||(14113989-14114031)
chr7 (222-264)||(14423639-14423681)
chr7 (322-379)||(13389693-13389750)
chr7 (232-338)||(36024372-36024485)
chr7 (306-338)||(2029244-2029276)
chr7 (306-338)||(7293333-7293365)
chr7 (306-338)||(11516544-11516576)
chr7 (306-338)||(14113903-14113935)
chr7 (306-338)||(15441478-15441510)
chr7 (269-338)||(15709428-15709501)
chr7 (323-379)||(16919870-16919926)
chr7 (306-338)||(30262043-30262075)
chr7 (306-338)||(42056188-42056220)
chr7 (306-338)||(371417-371449)
chr7 (306-338)||(3049905-3049937)
chr7 (306-338)||(13321334-13321366)
chr7 (306-334)||(15516765-15516793)
chr7 (306-338)||(25124450-25124482)
chr7 (306-338)||(47480944-47480976)
[»] chr2 (38 HSPs)
chr2 (2-386)||(19794581-19794968)
chr2 (2-338)||(36982364-36982705)
chr2 (2-386)||(43642833-43643221)
chr2 (2-386)||(20627190-20627577)
chr2 (8-338)||(462743-463075)
chr2 (2-338)||(8891241-8891581)
chr2 (1-338)||(24341309-24341654)
chr2 (99-264)||(19689401-19689567)
chr2 (99-264)||(23820168-23820334)
chr2 (99-264)||(14906440-14906606)
chr2 (99-264)||(20015108-20015274)
chr2 (2-264)||(25265390-25265654)
chr2 (132-264)||(17396653-17396784)
chr2 (242-338)||(22863169-22863267)
chr2 (1-214)||(7507894-7508109)
chr2 (306-386)||(22275045-22275125)
chr2 (306-386)||(22284278-22284358)
chr2 (307-386)||(15633538-15633617)
chr2 (2-252)||(19886661-19886914)
chr2 (322-379)||(43646232-43646289)
chr2 (306-339)||(19689314-19689347)
chr2 (306-338)||(9652796-9652828)
chr2 (306-338)||(14906354-14906386)
chr2 (327-379)||(19660221-19660273)
chr2 (306-338)||(23820388-23820420)
chr2 (306-337)||(25213372-25213403)
chr2 (306-379)||(19666848-19666921)
chr2 (1-81)||(19669279-19669360)
chr2 (322-379)||(25305769-25305826)
chr2 (272-379)||(31146032-31146138)
chr2 (306-338)||(7507757-7507789)
chr2 (20-80)||(9636761-9636821)
chr2 (306-338)||(17396567-17396599)
chr2 (2-81)||(19666525-19666605)
chr2 (306-338)||(20015328-20015360)
chr2 (36-80)||(24884718-24884762)
chr2 (306-338)||(28031134-28031166)
chr2 (306-338)||(33128372-33128404)
[»] scaffold0023 (3 HSPs)
scaffold0023 (2-338)||(48597-48935)
scaffold0023 (132-230)||(36225-36323)
scaffold0023 (306-338)||(61122-61154)
[»] scaffold0266 (2 HSPs)
scaffold0266 (2-338)||(1123-1462)
scaffold0266 (5-338)||(3508-3843)
[»] scaffold0195 (2 HSPs)
scaffold0195 (2-335)||(19205-19543)
scaffold0195 (2-264)||(21289-21553)
[»] scaffold0001 (2 HSPs)
scaffold0001 (14-338)||(171916-172242)
scaffold0001 (14-338)||(177619-177945)
[»] scaffold0077 (2 HSPs)
scaffold0077 (2-339)||(36836-37177)
scaffold0077 (307-386)||(15319-15398)
[»] chr5 (37 HSPs)
chr5 (2-338)||(23506964-23507302)
chr5 (2-338)||(27182471-27182811)
chr5 (1-338)||(18530988-18531332)
chr5 (1-338)||(22053753-22054098)
chr5 (99-264)||(20623066-20623232)
chr5 (99-264)||(21233528-21233694)
chr5 (102-264)||(37052844-37053007)
chr5 (99-264)||(16536294-16536460)
chr5 (99-262)||(25900408-25900571)
chr5 (1-264)||(34939276-34939540)
chr5 (132-252)||(29188284-29188404)
chr5 (134-248)||(27009975-27010089)
chr5 (2-252)||(4199985-4200238)
chr5 (2-252)||(22366481-22366734)
chr5 (2-252)||(25426627-25426880)
chr5 (2-249)||(18777995-18778245)
chr5 (2-252)||(12373-12626)
chr5 (132-249)||(43443398-43443515)
chr5 (132-252)||(19500031-19500151)
chr5 (307-381)||(11584374-11584448)
chr5 (2-252)||(21073595-21073848)
chr5 (306-379)||(5450695-5450768)
chr5 (322-379)||(21222462-21222519)
chr5 (2-114)||(23493916-23494029)
chr5 (306-338)||(16105967-16105999)
chr5 (306-338)||(20623286-20623318)
chr5 (306-338)||(21233442-21233474)
chr5 (306-338)||(25900320-25900352)
chr5 (306-338)||(37053061-37053093)
chr5 (207-248)||(21310709-21310750)
chr5 (207-248)||(23981516-23981557)
chr5 (306-338)||(108728-108760)
chr5 (50-114)||(7728466-7728530)
chr5 (306-338)||(9730278-9730310)
chr5 (306-338)||(16536514-16536546)
chr5 (2-50)||(29190479-29190527)
chr5 (185-257)||(32950879-32950951)
[»] scaffold0106 (1 HSPs)
scaffold0106 (7-338)||(41733-42066)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-338)||(882-1220)
[»] chr6 (38 HSPs)
chr6 (14-338)||(23153458-23153786)
chr6 (2-337)||(14626045-14626382)
chr6 (2-264)||(35009439-35009703)
chr6 (1-264)||(1657748-1658012)
chr6 (1-264)||(15862471-15862734)
chr6 (2-339)||(1650020-1650357)
chr6 (269-338)||(23148266-23148335)
chr6 (306-386)||(19983144-19983224)
chr6 (306-386)||(35015009-35015089)
chr6 (2-252)||(25175562-25175815)
chr6 (306-386)||(18583640-18583720)
chr6 (1-106)||(27740836-27740941)
chr6 (181-264)||(27751605-27751688)
chr6 (2-252)||(27653983-27654236)
chr6 (322-379)||(21623506-21623563)
chr6 (132-252)||(16825752-16825874)
chr6 (67-264)||(29665937-29666137)
chr6 (20-113)||(18381821-18381914)
chr6 (322-379)||(22361619-22361676)
chr6 (307-379)||(14152632-14152704)
chr6 (306-338)||(18002395-18002427)
chr6 (306-338)||(23995247-23995279)
chr6 (306-338)||(26090059-26090091)
chr6 (306-337)||(4991396-4991427)
chr6 (308-338)||(15742120-15742150)
chr6 (207-248)||(16887792-16887833)
chr6 (2-90)||(22361926-22362015)
chr6 (207-248)||(33324898-33324939)
chr6 (207-248)||(35136013-35136054)
chr6 (306-338)||(1657661-1657693)
chr6 (306-338)||(15862789-15862821)
chr6 (306-338)||(18823283-18823315)
chr6 (306-338)||(18839138-18839170)
chr6 (50-114)||(25367374-25367438)
chr6 (306-338)||(27751742-27751774)
chr6 (306-338)||(32276659-32276691)
chr6 (2-81)||(33324690-33324770)
chr6 (2-81)||(35136182-35136262)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-338)||(5990-6328)
[»] scaffold0009 (1 HSPs)
scaffold0009 (9-338)||(272031-272362)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-338)||(128095-128432)
scaffold0008 (140-230)||(31697-31787)
[»] scaffold0012 (2 HSPs)
scaffold0012 (14-338)||(247366-247694)
scaffold0012 (306-338)||(34075-34107)
[»] scaffold0302 (1 HSPs)
scaffold0302 (2-338)||(12114-12450)
[»] scaffold0162 (3 HSPs)
scaffold0162 (2-338)||(26340-26679)
scaffold0162 (2-264)||(8180-8441)
scaffold0162 (322-379)||(6877-6934)
[»] scaffold0018 (1 HSPs)
scaffold0018 (132-336)||(51110-51314)
[»] scaffold0498 (1 HSPs)
scaffold0498 (2-338)||(8877-9215)
[»] scaffold0218 (1 HSPs)
scaffold0218 (2-328)||(4996-5325)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-338)||(123087-123428)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-338)||(8847-9192)
scaffold0025 (2-290)||(148720-149012)
scaffold0025 (238-338)||(146838-146938)
[»] scaffold0141 (4 HSPs)
scaffold0141 (99-264)||(26892-27058)
scaffold0141 (99-257)||(22637-22796)
scaffold0141 (306-338)||(22857-22889)
scaffold0141 (306-338)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (99-264)||(1582-1748)
scaffold0124 (306-338)||(1496-1528)
[»] scaffold0028 (4 HSPs)
scaffold0028 (132-338)||(89378-89586)
scaffold0028 (213-338)||(107708-107835)
scaffold0028 (306-337)||(130880-130911)
scaffold0028 (207-248)||(79745-79786)
[»] scaffold0049 (2 HSPs)
scaffold0049 (2-257)||(48186-48443)
scaffold0049 (307-386)||(20493-20572)
[»] scaffold0132 (3 HSPs)
scaffold0132 (2-264)||(13505-13769)
scaffold0132 (306-386)||(42677-42754)
scaffold0132 (306-338)||(13824-13856)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-257)||(107745-108003)
scaffold0026 (132-248)||(64527-64648)
scaffold0026 (207-249)||(89863-89905)
[»] scaffold0125 (2 HSPs)
scaffold0125 (2-264)||(41647-41911)
scaffold0125 (298-338)||(41957-41997)
[»] scaffold1542 (1 HSPs)
scaffold1542 (2-264)||(534-798)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-264)||(34460-34726)
[»] scaffold0772 (2 HSPs)
scaffold0772 (132-257)||(5660-5785)
scaffold0772 (306-338)||(5846-5878)
[»] scaffold0529 (1 HSPs)
scaffold0529 (2-253)||(2961-3215)
[»] scaffold0215 (2 HSPs)
scaffold0215 (2-230)||(9371-9601)
scaffold0215 (2-230)||(16269-16499)
[»] scaffold0034 (1 HSPs)
scaffold0034 (306-386)||(80187-80267)
[»] scaffold0016 (3 HSPs)
scaffold0016 (305-386)||(166116-166197)
scaffold0016 (305-380)||(162036-162111)
scaffold0016 (306-379)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (306-386)||(31132-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (306-380)||(5735-5809)
scaffold0686 (306-380)||(5941-6015)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-214)||(5254-5468)
scaffold0022 (207-247)||(102923-102963)
[»] scaffold0420 (1 HSPs)
scaffold0420 (132-252)||(13325-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (132-248)||(167-283)
scaffold0116 (306-386)||(30417-30497)
[»] scaffold0342 (1 HSPs)
scaffold0342 (305-386)||(304-385)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-214)||(3720-3936)
[»] scaffold0622 (1 HSPs)
scaffold0622 (2-101)||(9381-9480)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-229)||(42996-43226)
[»] scaffold1711 (1 HSPs)
scaffold1711 (132-252)||(1304-1424)
[»] scaffold1164 (1 HSPs)
scaffold1164 (307-386)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (307-386)||(19802-19881)
scaffold0122 (307-386)||(24106-24185)
[»] scaffold0139 (2 HSPs)
scaffold0139 (132-230)||(14083-14181)
scaffold0139 (135-253)||(21115-21233)
[»] scaffold0066 (2 HSPs)
scaffold0066 (2-214)||(54415-54630)
scaffold0066 (306-338)||(45338-45370)
[»] scaffold0876 (1 HSPs)
scaffold0876 (307-377)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (307-381)||(6261-6335)
scaffold0310 (307-344)||(4-41)
[»] scaffold0361 (2 HSPs)
scaffold0361 (181-264)||(3370-3453)
scaffold0361 (5-57)||(3210-3262)
[»] scaffold0507 (1 HSPs)
scaffold0507 (306-379)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (322-379)||(35816-35873)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-92)||(48512-48603)
[»] scaffold1295 (1 HSPs)
scaffold1295 (322-379)||(442-499)
[»] scaffold0456 (2 HSPs)
scaffold0456 (207-248)||(1546-1587)
scaffold0456 (207-248)||(8691-8732)
[»] scaffold0123 (2 HSPs)
scaffold0123 (207-248)||(8216-8257)
scaffold0123 (2-81)||(8007-8087)
[»] scaffold0084 (1 HSPs)
scaffold0084 (139-257)||(56106-56226)
[»] scaffold0058 (2 HSPs)
scaffold0058 (207-248)||(70307-70348)
scaffold0058 (306-338)||(57392-57424)
[»] scaffold0053 (1 HSPs)
scaffold0053 (322-379)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (306-339)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (306-338)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (306-338)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (306-338)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (306-338)||(13285-13317)
[»] scaffold0032 (4 HSPs)
scaffold0032 (306-338)||(55904-55936)
scaffold0032 (306-338)||(108075-108107)
scaffold0032 (2-80)||(104793-104872)
scaffold0032 (207-248)||(93773-93814)
[»] scaffold0207 (1 HSPs)
scaffold0207 (295-338)||(18015-18058)
[»] scaffold0006 (1 HSPs)
scaffold0006 (27-114)||(197390-197477)
[»] scaffold0409 (2 HSPs)
scaffold0409 (210-248)||(1348-1386)
scaffold0409 (210-248)||(9603-9641)
[»] scaffold1272 (1 HSPs)
scaffold1272 (322-379)||(632-689)
[»] scaffold0970 (1 HSPs)
scaffold0970 (20-81)||(2471-2532)
[»] scaffold0483 (1 HSPs)
scaffold0483 (322-379)||(6999-7056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (207-248)||(22422-22463)
[»] scaffold0080 (1 HSPs)
scaffold0080 (322-379)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (322-379)||(31357-31414)
[»] scaffold0700 (1 HSPs)
scaffold0700 (27-91)||(2548-2612)
[»] scaffold0389 (1 HSPs)
scaffold0389 (207-247)||(10868-10908)
[»] scaffold0367 (1 HSPs)
scaffold0367 (306-338)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (306-338)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (306-338)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (306-338)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (306-338)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (306-338)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (306-338)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 312; Significance: 1e-176; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 2 - 388
Target Start/End: Complemental strand, 16744378 - 16743991
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16744378 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaat 16744279  T
Q  102 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||| ||||||||||||||||||||||    
T  16744278 tcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttat 16744179  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744178 tatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 16744079  T
Q  301 tgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcc 388  Q
    |||||||||||||| |||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16744078 tgatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 14 - 338
Target Start/End: Original strand, 13838905 - 13839232
Alignment:
Q  14 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 113  Q
    |||||||||| |||||||||| ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| |||||     
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  114 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 211  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  13839005 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 13839104  T
Q  212 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 310  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13839105 gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgat 13839204  T
Q  311 tatgataaagactaacccccttacctta 338  Q
    |||||| |||||||||||||||||||||    
T  13839205 tatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 14842826 - 14842487
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | |||||    
T  14842826 ttcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaa 14842727  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||    
T  14842726 attaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaatt 14842627  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 298  Q
    ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||    
T  14842626 atcttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaa 14842527  T
Q  299 aatgatgatgattatgataaagactaacccccttacctta 338  Q
    | ||| ||||||||||||||||||||||||||||||||||    
T  14842526 agtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 17912746 - 17912483
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||| |||| ||| ||||||||||||||    
T  17912746 ttcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaa 17912647  T
Q  101 ttcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| |||    
T  17912646 ttcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaatta 17912547  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  17912546 tcatcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 2049808 - 2050147
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | | ||||||||| |||| ||||| | |||||    
T  2049808 ttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaa 2049907  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| ||    
T  2049908 attaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaatt 2050007  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 298  Q
    || ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || ||||    
T  2050008 atcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaa 2050107  T
Q  299 aatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2050108 aatgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 12030411 - 12030073
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| || | | | ||||||||| |||||||||| |  ||||     
T  12030411 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaa 12030312  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| |||    
T  12030311 ttaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaatta 12030212  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||    
T  12030211 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaa 12030112  T
Q  300 atgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  12030111 atgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 301
Target Start/End: Complemental strand, 15859288 - 15858986
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  15859288 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 15859189  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| |||    
T  15859188 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaatta 15859089  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||| |||||||||    
T  15859088 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttaca 15858990  T
Q  298 aaat 301  Q
    ||||    
T  15858989 aaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 202 - 386
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
Q  202 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 298  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  299 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 3 - 274
Target Start/End: Complemental strand, 51158281 - 51158008
Alignment:
Q  3 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 102  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  51158281 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 51158182  T
Q  103 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  51158181 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 51158082  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt 274  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  51158081 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 257
Target Start/End: Complemental strand, 15936891 - 15936634
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||     
T  15936891 tcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaa 15936792  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||    
T  15936791 ttaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaatta 15936692  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    | ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  15936691 tcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 218 - 338
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  218 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 317  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  318 aagactaacccccttacctta 338  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 15938734 - 15938476
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||| |||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||    
T  15938734 ttcagcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaa 15938635  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||    
T  15938634 attaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaatt 15938535  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    || |||||||||||  |||||||||||||| | |||||||||||| |||||| ||||||    
T  15938534 atcatcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  232 agttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  232 agttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 13955021 - 13954890
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13954923  T
Q  232 agttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||| ||||||    
T  13954922 agttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  303 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 381  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 15614833 - 15615170
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | |||     
T  15614833 tcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaa 15614932  T
Q  102 tcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||    
T  15614933 ttaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaatta 15615032  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaa 298  Q
    | ||||||||||||||||||| ||| || || |||  |||||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||    
T  15615033 tcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaa 15615130  T
Q  299 aatgatgatgattatgataaagactaacccccttaccttaa 339  Q
    ||| |  ||||||||||||||||||||||||||||||||||    
T  15615131 aatta-catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 16821138 - 16821369
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||| |||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | |||||     
T  16821138 tcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 16821237  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  16821238 tcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 16821337  T
Q  199 attatcaattcatgcatacaaacatatcatca 230  Q
    || ||||||| ||||||||||||||| |||||    
T  16821338 atcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 367
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  306 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 367  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 47984649 - 47984759
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||    
T  47984649 tcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaat 47984748  T
Q  102 tcaactacaac 112  Q
     |||| |||||    
T  47984749 ccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 48003223 - 48003333
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||    
T  48003223 tcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaat 48003322  T
Q  102 tcaactacaac 112  Q
     |||| |||||    
T  48003323 ccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 47993936 - 47994046
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||    
T  47993936 tcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaat 47994035  T
Q  102 tcaactacaac 112  Q
     |||| |||||    
T  47994036 ccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 48012509 - 48012619
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||    
T  48012509 tcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaat 48012608  T
Q  102 tcaactacaac 112  Q
     |||| |||||    
T  48012609 ccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  324 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 338
Target Start/End: Original strand, 54651642 - 54651796
Alignment:
Q  185 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaaca 283  Q
    ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| || | |  |||||||||||    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaaca 54651741  T
Q  284 tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |  |||| |  | ||| |||  ||||||||||| ||||| |||||||||||||||    
T  54651742 tgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 12265050 - 12264932
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||||||| | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| |    
T  12265050 tcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt 12264951  T
Q  102 tcaactacaacatgtcaaa 120  Q
    ||||| ||||||| |||||    
T  12264950 tcaacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 372  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 11986245 - 11986173
Alignment:
Q  185 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986245 acaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 264
Target Start/End: Complemental strand, 22907477 - 22907214
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907477 tcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 22907378  T
Q  102 tcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||    
T  22907377 tcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 22907278  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22907277 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 2 - 386
Target Start/End: Complemental strand, 16405236 - 16404852
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| ||||||| || |||||||| |  |||||||||||||| |||||| |||| || ||| ||||||||||| ||||||||||||  |||||    
T  16405236 tcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaat 16405137  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  16405136 ttaac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 16405040  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||     
T  16405039 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac- 16404941  T
Q  298 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  16404940 aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 3 - 338
Target Start/End: Complemental strand, 16193979 - 16193643
Alignment:
Q  3 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 102  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  16193979 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 16193880  T
Q  103 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
     ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| ||||    
T  16193879 taacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattat 16193780  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 300  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  16193779 catcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaa 16193680  T
Q  301 tgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16193679 tgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 14 - 338
Target Start/End: Complemental strand, 24929043 - 24928716
Alignment:
Q  14 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 113  Q
    |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||     
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  114 tgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 211  Q
    |  | ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  24928943 tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 24928844  T
Q  212 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 310  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  24928843 gcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgat 24928744  T
Q  311 tatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||| ||||||||    
T  24928743 tatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 43373732 - 43373392
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | | ||||||||| |||||||||| | |||||     
T  43373732 tcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaa 43373633  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||    
T  43373632 ttaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataatta 43373533  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| || |||    
T  43373532 tcatcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcaca 43373433  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43373432 aaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 17345568 - 17345832
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| || ||||| || |||||||||||| |||||    
T  17345568 ttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaa 17345667  T
Q  101 ttcaactacaacatgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||| | | ||| |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| ||    
T  17345668 ttca-caataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaatt 17345766  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    || ||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||||| ||||||    
T  17345767 atcatcaattcatgcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 6774510 - 6774258
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||| |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | |||||     
T  6774510 tcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaa 6774411  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  6774410 ttaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 6774311  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    | ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  6774310 tcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 24548981 - 24549233
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | |||     
T  24548981 tcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaa 24549080  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  24549081 ttaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 24549180  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    | ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  24549181 tcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  232 agttggagcacgaattt 248  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  232 agttggagcacgaattt 248  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 23837214 - 23837308
Alignment:
Q  20 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 114  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837214 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 222944 - 222754
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  222944 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 222845  T
Q  102 tcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 189  Q
    | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  222844 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 736567 - 736377
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  736567 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 736468  T
Q  102 tcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 189  Q
    | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  736467 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 860462 - 860272
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  860462 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 860363  T
Q  102 tcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 189  Q
    | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  860362 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 26680200 - 26680463
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680200 tcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 26680299  T
Q  102 tcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| ||||    
T  26680300 tcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattat 26680399  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26680400 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 2 - 386
Target Start/End: Complemental strand, 54118508 - 54118120
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||    
T  54118508 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataactaaat 54118409  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| |||||| ||| | ||||||||||||||| |||    
T  54118408 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaatta 54118309  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttaca 297  Q
    | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||    
T  54118308 tcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcaca 54118209  T
Q  298 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  54118208 aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 13246429 - 13246769
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  13246429 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 13246528  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  13246529 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 13246628  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttaca 297  Q
    | || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||||||    
T  13246629 tcattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttaca 13246728  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13246729 aaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 15675354 - 15675009
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||    
T  15675354 ttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaa 15675255  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||    
T  15675254 ttcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatt 15675155  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttac 296  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |    
T  15675154 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgc 15675055  T
Q  297 aaa----atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||    ||||||||||||||||| |||||||||||||||||||||    
T  15675054 aaaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 132 - 338
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  232 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 331  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  332 tacctta 338  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 67 - 338
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
Q  67 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 164  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| ||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  165 ttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca- 263  Q
    || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
Q  264 -taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 338  Q
     ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 31115627 - 31115865
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||    
T  31115627 ttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaa 31115726  T
Q  101 ttcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| ||    
T  31115727 ttcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaatt 31115826  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttgg 237  Q
    || ||||||||||||||||||||||||||||| ||||||    
T  31115827 atcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  202 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  300 ----atgatgatgattatgataaagactaacccccttacctta 338  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 13048353 - 13048221
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |    
T  13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga 13048254  T
Q  232 agttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||| ||||||||||||||| ||||||    
T  13048253 agttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 10644218 - 10644467
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | |||||     
T  10644218 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 10644317  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    ||||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| ||||||||| |||||| ||| | || |||||||||||| ||    
T  10644318 tcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaatt 10644417  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  10644418 atcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  232 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 325  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  326 cccccttacctta 338  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 111394 - 111493
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  111394 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 47357653 - 47357906
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||  |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  47357653 tcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 47357752  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  |    
T  47357753 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaact 47357852  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  |||||| |||||||||||||||| ||||| ||   ||||||||||||||||    
T  47357853 aacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 248
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  67 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- 163  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  164 tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10104496 - 10104449
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaac 48  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||||    
T  10104496 ttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaac 10104449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
Q  20 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 114  Q
    |||| |||||||| | ||||||||||||| ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166177 tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
Q  27 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 114  Q
    |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8374506 - 8374619
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||| || | ||||||||||||| | || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | ||||     
T  8374506 ttcatcatcaatcgataattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcat 8374605  T
Q  101 ttcaactacaacat 114  Q
    |||||| |||||||    
T  8374606 ttcaacaacaacat 8374619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 247  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
Q  50 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 114  Q
    |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13809711 acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 52265757 - 52265645
Alignment:
Q  3 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||  ||||||| ||| | |||||| | |||| ||||||||  ||| |||  |||||| ||||||||||||||| ||| ||||| || | ||||    
T  52265757 catcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 52265658  T
Q  102 tcaactacaacat 114  Q
    ||||| |||||||    
T  52265657 tcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 388
Target Start/End: Original strand, 41394220 - 41394609
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | |||||    
T  41394220 ttcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaa 41394319  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
       ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| ||    
T  41394320 cataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaatt 41394419  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 298  Q
    || ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394420 atcatcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 41394519  T
Q  299 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcc 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41394520 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 20931344 - 20931682
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||| ||| |||||||||| ||||||||   || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | |||||     
T  20931344 tcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 20931443  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||    
T  20931444 ttaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaatta 20931543  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||    
T  20931544 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaa 20931643  T
Q  300 atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  20931644 atgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 20445678 - 20446019
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | ||||    
T  20445678 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaat 20445777  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| |||    
T  20445778 tcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatta 20445877  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-ac 296  Q
    | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||    
T  20445878 tcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcac 20445977  T
Q  297 aaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  20445978 aaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 20893890 - 20893551
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||  ||||||||| |||||||||| ||||||||||||| |||||||| |||| ||   | ||||||||||| ||||||||||||  |||||    
T  20893890 tcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaat 20893791  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||    
T  20893790 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaatta 20893691  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| |||||    
T  20893690 tcatcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttaca 20893592  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  20893591 aaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 20913036 - 20913367
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| ||||||||||      |||    
T  20913036 tcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca------aat 20913129  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||    
T  20913130 t-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaatta 20913228  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| ||||    
T  20913229 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaa 20913328  T
Q  300 atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  20913329 atgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 37844715 - 37844374
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  37844715 tcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 37844616  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttca-taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
      ||| ||||| |  |||| |||||  |||  |||||||||||| ||  || |||||| | | || || |||||| ||| | ||||||||||||||| ||    
T  37844615 ctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatt 37844516  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttac 296  Q
    || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||    
T  37844515 atcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcac 37844416  T
Q  297 aaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37844415 aaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 20531443 - 20531783
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | ||||    
T  20531443 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaat 20531542  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| |||    
T  20531543 tcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatta 20531642  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||    
T  20531643 tcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcaca 20531742  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  20531743 aaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 22227807 - 22228146
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | |||||    
T  22227807 ttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaa 22227906  T
Q  101 ttcaactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||    
T  22227907 attaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatt 22228006  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttaca 297  Q
    || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | |    
T  22228007 atcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 22228106  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctt 337  Q
    || ||   |||||||||||||  |||||||||||||||||    
T  22228107 aattgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 22232504 - 22232843
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | |||||    
T  22232504 ttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaa 22232603  T
Q  101 ttcaactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||    
T  22232604 attaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatt 22232703  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttaca 297  Q
    || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | |    
T  22232704 atcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 22232803  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctt 337  Q
    || ||   |||||||||||||  |||||||||||||||||    
T  22232804 aattgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 2116253 - 2116506
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagc-tcaa 100  Q
    |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| |   ||||    
T  2116253 tcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaa 2116352  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  2116353 attaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 2116452  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    || ||||||||||||||||||||||| ||||| |||   ||||||||| |||||    
T  2116453 atcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 380  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 339
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  232 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 330  Q
    |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccc 45051750  T
Q  331 ttaccttaa 339  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  272 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 371  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  372 agctccta 379  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 41218728 - 41218808
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 337
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  306 atgattatgataaagactaacccccttacctt 337  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 22143611 - 22143531
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 81  Q
    ||||||||||  ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||    
T  22143611 tcatcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattg 22143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 212; Significance: 1e-116; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 264
Target Start/End: Complemental strand, 37329 - 37066
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37329 tcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 37230  T
Q  102 tcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
     |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37229 ccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 37130  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37129 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 7293016 - 7293279
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293016 tcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 7293115  T
Q  102 tcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||    
T  7293116 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 7293215  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7293216 tattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 2 - 379
Target Start/End: Original strand, 3059965 - 3060344
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||    
T  3059965 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaat 3060064  T
Q  102 tcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
      ||| ||||| |  |||| |||| |||||||  || |||||||| || || |||||| ||||||||| |||||| ||| | ||||||| |  |||| ||    
T  3060065 ctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatt 3060163  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 298  Q
    || ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  3060164 atcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaa 3060263  T
Q  299 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  3060264 aatgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 5 - 338
Target Start/End: Original strand, 16211768 - 16212103
Alignment:
Q  5 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 104  Q
    |||| ||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||  |||||||||| | ||||| | |    
T  16211768 tcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaatta 16211867  T
Q  105 actacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 202  Q
    || ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| |    
T  16211868 acaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatca 16211967  T
Q  203 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||    
T  16211968 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatg 16212067  T
Q  303 atgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||||||||||    
T  16212068 atgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 8 - 338
Target Start/End: Complemental strand, 11580997 - 11580661
Alignment:
Q  8 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 107  Q
    ||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  11580997 tcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 11580898  T
Q  108 acaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatca 205  Q
    ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||    
T  11580897 acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatca 11580798  T
Q  206 attcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaat 301  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| |||||    
T  11580797 attcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaat 11580698  T
Q  302 gatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11580697 gatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 13037278 - 13036938
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  ||  | ||||| ||||| |||||||||||| ||||||    
T  13037278 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaat 13037179  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||    
T  13037178 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaatta 13037079  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||    
T  13037078 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttaca 13036979  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  13036978 aaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 36052666 - 36053003
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | ||||||||||||| |||||||||| | |||||     
T  36052666 tcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaa 36052765  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||    
T  36052766 ttaac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataatta 36052862  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | |||||||||||||||||||| |||||||| |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || |||    
T  36052863 tcatcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcaca 36052962  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36052963 aaatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 264
Target Start/End: Complemental strand, 47481295 - 47481031
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| ||||||    
T  47481295 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaat 47481196  T
Q  102 tcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    ||||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||    
T  47481195 tcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatt 47481097  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    || ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  47481096 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 2 - 257
Target Start/End: Complemental strand, 18254099 - 18253842
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||     
T  18254099 tcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaa 18254000  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||    
T  18253999 ttaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaatta 18253900  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    | ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  18253899 tcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 263
Target Start/End: Original strand, 13321013 - 13321278
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| ||||||| || | ||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  13321013 tcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 13321112  T
Q  102 tcaacta-caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacac 196  Q
    ||||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  ||||||| ||| | |||||||||||||||     
T  13321113 tcaacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaa 13321211  T
Q  197 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 263  Q
    |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
T  13321212 ttatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 16479215 - 16478968
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | |||||    
T  16479215 ttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaa 16479116  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  16479115 attaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 16479016  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 246  Q
    || ||||||||||||||||||||||| ||||  |||  ||||||||||    
T  16479015 atcatcaattcatgcatacaaacataacatcgcagtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  232 agttggagcacgaatttagcaacaatcatccat 264  Q
    ||||||||||| |||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  232 agttggagcacgaattt 248  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 336
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  136 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 235  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  236 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 333  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  334 cct 336  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  133 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 232  Q
    |||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  233 gttggagcacgaatttagcaa 253  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  272 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 371  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  372 agctccta 379  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  140 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 239  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  240 cacgaatttagca 252  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 386
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  222 atatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  222 atatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  232 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 325  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  326 -cccccttacctta 338  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  269 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  323 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 334
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  306 atgattatgataaagactaacccccttac 334  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 386
Target Start/End: Complemental strand, 19794968 - 19794581
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| |||| |   || ||||||||||| |||||||||||| ||||||    
T  19794968 tcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaat 19794869  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  19794868 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 19794769  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||| |||||||||    
T  19794768 ttatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttaca 19794670  T
Q  298 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  19794669 aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 36982705 - 36982364
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  36982705 tcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaat 36982606  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| |||    
T  36982605 tcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaatta 36982506  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac- 296  Q
    | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||     
T  36982505 tcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttaca 36982406  T
Q  297 aaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36982405 aaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 2 - 386
Target Start/End: Complemental strand, 43643221 - 43642833
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| |  ||||||||||||||||||||| |||| || ||| | ||||||||| |||||||||||| |||||     
T  43643221 tcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaa 43643122  T
Q  102 tcaactacaac-atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  43643121 ttaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 43643022  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| |||    
T  43643021 tcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcaca 43642922  T
Q  298 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  43642921 aaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 386
Target Start/End: Complemental strand, 20627577 - 20627190
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||  |||||||| | ||||||||||||| |||||| | |||| || | | || |||||||| |||||||| | | |||||     
T  20627577 tcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaa 20627478  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||  ||||| ||| | ||||||||||||||| |||    
T  20627477 ttaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaatta 20627378  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaa 298  Q
    | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| |||||||    
T  20627377 tcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaa 20627278  T
Q  299 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  20627277 aatgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 8 - 338
Target Start/End: Original strand, 462743 - 463075
Alignment:
Q  8 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 107  Q
    ||||| |||||||||| |||||||| | ||||||||||||  || ||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  462743 tcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 462842  T
Q  108 acaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 204  Q
    ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||    
T  462843 acaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatc 462941  T
Q  205 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 304  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  462942 aattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgat 463041  T
Q  305 gatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||||||||    
T  463042 gatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 8891241 - 8891581
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||    
T  8891241 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaat 8891340  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  |||||||||||||| |||    
T  8891341 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaatta 8891440  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||    
T  8891441 tcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttaca 8891540  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  8891541 aaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 24341654 - 24341309
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||||   |||||| |||| || ||| ||||||||||| ||| |||||||| |||||    
T  24341654 ttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaa 24341555  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| ||    
T  24341554 ttcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaatt 24341455  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttac 296  Q
    || ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |    
T  24341454 atcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgc 24341355  T
Q  297 aaa----atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||    ||||||||||||||||| |||||||||||||||||||||    
T  24341354 aaaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 264
Target Start/End: Complemental strand, 25265654 - 25265390
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  |||    
T  25265654 tcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataat 25265555  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  25265554 tcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 25265455  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    | ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  25265454 tcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  232 agttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  242 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 7508109 - 7507894
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctca 99  Q
    ||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||    
T  7508109 ttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctca 7508010  T
Q  100 attcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacac 196  Q
    ||| ||| ||||| | | |||||||| ||| |||  ||||||||||||||||| | |||| ||||||||| |||||| ||| | |||||||||||||||     
T  7508009 att-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaa 7507912  T
Q  197 ttattatcaattcatgca 214  Q
    |||| |||||||||||||    
T  7507911 ttatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 307 - 386
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 19886914 - 19886661
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  19886914 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 19886815  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  |    
T  19886814 ttaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaact 19886715  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  19886714 aacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaa 339  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  327 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 337
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  306 atgattatgataaagactaacccccttacctt 337  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19669360 - 19669279
Alignment:
Q  1 ttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 81  Q
    |||||||||| | ||||||| ||| |||||||| | |||| |||||||| | ||||||  |||||| |||||||||||||||    
T  19669360 ttcatcatcagttcatgaattatgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 379
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  272 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 370  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  371 tagctccta 379  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 9636761 - 9636821
Alignment:
Q  20 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 80  Q
    |||| |||||||||| |||| |||||||| |||| |||| ||| || ||||||||||||||    
T  9636761 tatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt 9636821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 19666525 - 19666605
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 81  Q
    ||||||||||  ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||    
T  19666525 tcatcatcaaaacatgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaacaacatcaattg 19666605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
Q  36 atgattcatcaactacaacatctattagcatcaacaacatcaatt 80  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||    
T  24884718 atgaatcatcaacaacaatatctattagcaacaacaacatcaatt 24884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 171; Significance: 1e-91; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 48597 - 48935
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||    
T  48597 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaat 48696  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  48697 ctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaatta 48796  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  48797 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaa 48896  T
Q  300 atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48897 atgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 36225 - 36323
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 230  Q
    ||||||| |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
T  36225 gcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 168; Significance: 6e-90; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 1123 - 1462
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| | |||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| |||||||||| | |||||     
T  1123 tcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 1222  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  1223 ttaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 1322  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaa 298  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  1323 ttatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaa 1422  T
Q  299 aatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1423 aatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 5 - 338
Target Start/End: Complemental strand, 3843 - 3508
Alignment:
Q  5 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 104  Q
    |||||||||||| |||||| |||||||| | || |||| ||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |    
T  3843 tcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaatta 3744  T
Q  105 actacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 202  Q
    || ||||| |  |||| |   ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |    
T  3743 acaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatca 3644  T
Q  203 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  3643 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatg 3544  T
Q  303 atgatgattatgataaagactaacccccttacctta 338  Q
    | ||||||||||| ||||||||||||||||||||||    
T  3543 aagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 164; Significance: 1e-87; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 2 - 335
Target Start/End: Original strand, 19205 - 19543
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  19205 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaat 19304  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||    
T  19305 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaatta 19404  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac- 296  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||     
T  19405 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttaca 19504  T
Q  297 aaaatgatgatgattatgataaagactaacccccttacc 335  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  19505 aaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 21289 - 21553
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  21289 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaat 21388  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||    
T  21389 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaatta 21488  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21489 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 163; Significance: 6e-87; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 14 - 338
Target Start/End: Original strand, 171916 - 172242
Alignment:
Q  14 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 113  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  114 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 211  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  172016 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T
Q  212 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 311  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  172116 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 172215  T
Q  312 atgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||    
T  172216 atgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 14 - 338
Target Start/End: Original strand, 177619 - 177945
Alignment:
Q  14 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 113  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  114 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 211  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  177719 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T
Q  212 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 311  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  177819 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 177918  T
Q  312 atgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||    
T  177919 atgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 37177 - 36836
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||| ||||||| |||||| ||||| ||||||    
T  37177 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaat 37078  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
     |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| |||    
T  37077 ccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaatta 36978  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| || |||    
T  36977 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcaca 36878  T
Q  298 aaatgatgatgattatgataaagactaacccccttaccttaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36877 aaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 307 - 386
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 1e-84; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 23506964 - 23507302
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | |||||     
T  23506964 tcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 23507063  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  23507064 ttaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 23507163  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    | ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||    
T  23507164 tcatcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaa 23507263  T
Q  300 atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||  ||||||||||||||||||||||||||||||||||    
T  23507264 atggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 27182811 - 27182471
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||| ||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  27182811 tcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 27182712  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||    
T  27182711 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaatta 27182612  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 297  Q
    | |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||    
T  27182611 tcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttaca 27182512  T
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  27182511 aaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 18531332 - 18530988
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| ||||||||||||||||| | | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||    
T  18531332 ttcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaa 18531233  T
Q  101 ttcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||| ||||| |  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |    
T  18531232 ttcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaat 18531134  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaattta 295  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| ||     
T  18531133 tatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattg 18531034  T
Q  296 caaaatgatgat---gattatgataaagactaacccccttacctta 338  Q
    ||||||||||||   ||||||||| |||||||||||||||||||||    
T  18531033 caaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 22054098 - 22053753
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||    
T  22054098 ttcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaa 22053999  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  |    
T  22053998 ttcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaact 22053899  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttac 296  Q
    || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |    
T  22053898 atcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttc 22053799  T
Q  297 aaa----atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||    ||||||||||||||||| |||||||||||||||||||||    
T  22053798 aaaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 102 - 264
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  102 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 200  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  201 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 99 - 262
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 262  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 34939276 - 34939540
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| |||||    
T  34939276 ttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaa 34939375  T
Q  101 ttcaactacaacatgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||| | |  || |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| ||    
T  34939376 ttca-caatgacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaatt 34939474  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    || ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||    
T  34939475 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  232 agttggagcacgaatttagca 252  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  134 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 233  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  234 ttggagcacgaattt 248  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 4200238 - 4199985
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||| ||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | |||||     
T  4200238 tcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 4200139  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  |    
T  4200138 tcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaact 4200039  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
T  4200038 aacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 22366734 - 22366481
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||||| |||| | |||||     
T  22366734 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaa 22366635  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  |    
T  22366634 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaact 22366535  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22366534 aacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 25426627 - 25426880
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  25426627 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 25426726  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  |    
T  25426727 ttaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaact 25426826  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  25426827 aacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 249
Target Start/End: Complemental strand, 18778245 - 18777995
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | ||  ||  | ||||||| ||| |||||||||| | |||||     
T  18778245 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaa 18778146  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  |    
T  18778145 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaact 18778046  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 249  Q
    |  ||||||||||||||||||||||| ||||| ||   |||||||||||||    
T  18778045 aacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 12373 - 12626
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  12373 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 12472  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  |    
T  12473 ttaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaact 12572  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  12573 aacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  232 agttggagcacgaattta 249  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 381  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 21073848 - 21073595
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  21073848 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaa 21073749  T
Q  102 tcaactacaacatgtca--aattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |   |  |||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  |    
T  21073748 ttaacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaact 21073649  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  ||| ||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  21073648 aacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 23493916 - 23494029
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||  ||||||| ||| | |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | |||    
T  23493916 tcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 23494015  T
Q  101 ttcaactacaacat 114  Q
    |||||| |||||||    
T  23494016 ttcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
Q  50 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 114  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 29190527 - 29190479
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaacta 50  Q
    |||| |||||| |||||||||| |||||||| | |||||||||||||||    
T  29190527 tcataatcaattcatgaatatgcatacccaagcaatgattcatcaacta 29190479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 32950879 - 32950951
Alignment:
Q  185 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950879 acaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 7 - 338
Target Start/End: Original strand, 41733 - 42066
Alignment:
Q  7 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 106  Q
    |||||| |||||||||| |||||||| | ||||||||||| |||||||| | |||| || | | | ||||||||| |||||||||||| ||||||  |||    
T  41733 atcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaac 41832  T
Q  107 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 204  Q
     ||||| |  |||| |||| | |||  |||||||||||| || || |||||| ||||||||| | |||| ||| | |||||||||   ||| |||| |||    
T  41833 aacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatc 41932  T
Q  205 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 304  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41933 aattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgat 42032  T
Q  305 gatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||| |||||||||||||||    
T  42033 gatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 1220 - 882
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| |||||||| | || |||||||||  | |||||  |||| |||| | ||||||| ||| |||||||| | | |||||    
T  1220 ttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaa 1121  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    || ||| ||||| |  |||| |||||| |||  |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  1120 tt-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 1022  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 298  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  ||    
T  1021 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaa 922  T
Q  299 aatgatgatgattatgataaagactaacccccttacctta 338  Q
    | ||| ||||||||||||||||||||||||||||||||||    
T  921 agtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 14 - 338
Target Start/End: Original strand, 23153458 - 23153786
Alignment:
Q  14 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 113  Q
    |||||||||||||||||||   ||||||||||||| |||||||| |||| || | | || |||||||| |||||||||||| ||||||  ||| |||||     
T  23153458 catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact 23153557  T
Q  114 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 211  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  23153558 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 23153657  T
Q  212 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatga 309  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  23153658 gcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 23153757  T
Q  310 ttatgataaagactaacccccttacctta 338  Q
    ||||||| |||||||||||||||||||||    
T  23153758 ttatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 337
Target Start/End: Complemental strand, 14626382 - 14626045
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | |||||     
T  14626382 tcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaag 14626283  T
Q  102 tcaactacaacatgtca-aattcatccatttgcaca--attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  || |||||| ||| |||||||  ||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  14626282 ttaacaacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 14626184  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 298  Q
    || ||||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||    
T  14626183 atcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaa 14626084  T
Q  299 aatgatgatgattatgataaagactaacccccttacctt 337  Q
    | ||| ||||||| ||||||  |||||||||||||||||    
T  14626083 agtgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 264
Target Start/End: Complemental strand, 35009703 - 35009439
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  |||    
T  35009703 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataat 35009604  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  35009603 tcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 35009504  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    | |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||| ||||||    
T  35009503 tcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 1658012 - 1657748
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| |||||    
T  1658012 ttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaa 1657913  T
Q  101 ttcaactacaacatgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||| | | ||| |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| ||    
T  1657912 ttca-caataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaatt 1657814  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    || |||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  1657813 atcatcaattcatgcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 15862471 - 15862734
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||||| ||| | |||||||||||| |||||    
T  15862471 ttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaa 15862569  T
Q  101 ttcaactacaacatgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||| | | ||| |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| ||    
T  15862570 ttca-caataacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaatt 15862668  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    || ||||||||||||||||||||||| ||||| |||| |||||||||||||| |||||| ||||||    
T  15862669 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 1650357 - 1650020
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||| |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | |||||     
T  1650357 tcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaa 1650258  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||    
T  1650257 ttaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaatta 1650158  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaa 298  Q
    | |||||||||||||||||||| || ||||| |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||    
T  1650157 tcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaa 1650060  T
Q  299 aatgatgatgattatgataaagactaacccccttaccttaa 339  Q
    ||| |  ||||||||||||||||||||||||||||||||||    
T  1650059 aatta-catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  269 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 25175562 - 25175815
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | |||||     
T  25175562 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaa 25175661  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  |    
T  25175662 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaact 25175761  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  ||||||||||||||||||||||| || || ||   ||||||||||||||||    
T  25175762 aacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27740836 - 27740941
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| |||||||||| |||||||||| |||||||||| || ||||||||   ||  | |||| |||||||||| ||| |||||||| |||||    
T  27740836 ttcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaa 27740935  T
Q  101 ttcaac 106  Q
    ||||||    
T  27740936 ttcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  181 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 27654236 - 27653983
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||| |||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| | | |||||||||| | |||||     
T  27654236 tcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaa 27654137  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  |    
T  27654136 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaact 27654037  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 252  Q
    |  |||||||||||||||||| |||| ||||| ||   ||||||||||||||||    
T  27654036 aacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 16825874 - 16825752
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatc 229  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||    
T  16825874 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatc 16825775  T
Q  230 aaagttggagcacgaatttagca 252  Q
    | ||   ||||||||||||||||    
T  16825774 acagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 264
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
Q  67 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 164  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  165 tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 262  Q
    ||  ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  263 at 264  Q
    ||    
T  29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 18381914 - 18381821
Alignment:
Q  20 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 113  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381914 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 337
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  306 atgattatgataaagactaacccccttacctt 337  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 338
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  308 gattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 22362015 - 22361926
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 90  Q
    ||||||||||| ||||||| ||| | |||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| ||||    
T  22362015 tcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
Q  50 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 114  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 33324690 - 33324770
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 81  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||  ||||||  ||||||||||||||    
T  33324690 tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg 33324770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 35136262 - 35136182
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 81  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||  ||||||  ||||||||||||||    
T  35136262 tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg 35136182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 6328 - 5990
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| |||||||| | || |||||||||  | ||||   |||| |||| | ||||||| ||| |||||||||| | |||||    
T  6328 ttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaa 6229  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    || ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  6228 tt-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 6130  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 298  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||    
T  6129 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaa 6030  T
Q  299 aatgatgatgattatgataaagactaacccccttacctta 338  Q
    | |||  |||||||||||||||||||||||||||||||||    
T  6029 agtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 338
Target Start/End: Original strand, 272031 - 272362
Alignment:
Q  9 caatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta 108  Q
    |||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| |    
T  272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
Q  109 caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaa 206  Q
    |||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||    
T  272131 caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa 272230  T
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatga 306  Q
    ||||| |||||||||||||||| | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  272231 ttcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatga 272330  T
Q  307 tgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||||||||||||    
T  272331 tgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 128432 - 128095
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||||    
T  128432 tcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctcaat 128333  T
Q  102 tcaactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |   ||| |||  ||||||||||| |||||  ||  | |||| |||| |||||| ||| | |||||||||| |||| |||    
T  128332 t-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaatta 128234  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||    
T  128233 tcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaa 128134  T
Q  300 atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  128133 atgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  140 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 230  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 14 - 338
Target Start/End: Complemental strand, 247694 - 247366
Alignment:
Q  14 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 113  Q
    |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||  ||| |||||     
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  114 tgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 211  Q
    |  |||| |   ||| |||  ||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| ||||||||||    
T  247594 tagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcat 247495  T
Q  212 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatga 309  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  247494 gcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 247395  T
Q  310 ttatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||    
T  247394 ttatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 12114 - 12450
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||| | || |||||| ||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||||    
T  12114 tcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaat 12213  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    |  || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| |||    
T  12214 t--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaatta 12311  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaa 298  Q
    | ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||    
T  12312 tcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaa 12410  T
Q  299 aatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||| | ||||||||||||||||||||||||||||||||||    
T  12411 aattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 140; Significance: 3e-73; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 26679 - 26340
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| ||| |||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |    
T  26679 tcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcatt 26580  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| |||    
T  26579 ctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaatta 26480  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaa 298  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||||||    
T  26479 tcatcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaa 26380  T
Q  299 aatgatgatgattatgataaagactaacccccttacctta 338  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  26379 aatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 264
Target Start/End: Complemental strand, 8441 - 8180
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  |||    
T  8441 tcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataat 8342  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    |||||   |||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| |||    
T  8341 tcaac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaatta 8245  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    | | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  8244 tcaccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 132 - 336
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  232 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 331  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  332 tacct 336  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 8877 - 9215
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||     
T  8877 tcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaa 8976  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||| |||||| || |||||| ||| | |||||||||| |||| |||    
T  8977 ttaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaatta 9076  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 299  Q
    | ||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||| ||||    
T  9077 tcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaa 9176  T
Q  300 atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  9177 atgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 328
Target Start/End: Complemental strand, 5325 - 4996
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |    
T  5325 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcatt 5226  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| |||    
T  5225 ctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaatta 5126  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaa 298  Q
    | ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||    
T  5125 tcatcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaa 5026  T
Q  299 aatgatgatgattatgataaagactaaccc 328  Q
    |||||| |||||||||||||||||||||||    
T  5025 aatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 123428 - 123087
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||    
T  123428 tcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaat 123329  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  123328 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 123229  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac- 296  Q
    | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| ||||||||     
T  123228 tcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttaca 123129  T
Q  297 aaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||| |||||||||||| | |||||||||||||||||||||    
T  123128 aaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 130; Significance: 3e-67; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 8847 - 9192
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| ||||  | ||| ||||||||||| |||  ||||||| |||||    
T  8847 ttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaa 8946  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||    
T  8947 ttcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatt 9046  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttac 296  Q
    || ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || |    
T  9047 atcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgc 9146  T
Q  297 aaa----atgatgatgattatgataaagactaacccccttacctta 338  Q
    |||    ||||||||||||||||| ||||||||| | |||||||||    
T  9147 aaaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 290
Target Start/End: Original strand, 148720 - 149012
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||  |||||||| | ||||||||||||| ||||| || |||| || | | ||||||||||| |||||||||| | |||||     
T  148720 tcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 148819  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||    
T  148820 ttaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaatta 148919  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 290  Q
    | ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148920 tcatcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  238 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 337  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  338 a 338  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 123; Significance: 4e-63; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 264
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 99 - 257
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  99 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 118; Significance: 4e-60; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 132 - 338
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  232 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 329  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  330 cttacctta 338  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  213 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 310  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  311 tatgataaagactaacccccttacctta 338  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 337
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  306 atgattatgataaagactaacccccttacctt 337  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 257
Target Start/End: Original strand, 48186 - 48443
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| |||||||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||     
T  48186 tcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaa 48285  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||    
T  48286 ttaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaatta 48385  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    | ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  48386 tcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 386
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 101; Significance: 6e-50; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 13505 - 13769
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  |||    
T  13505 tcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataat 13604  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    ||||| |||||||  |||| |||||| |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  13605 tcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 13704  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    | ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  13705 tcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 107745 - 108003
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| | |||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||    
T  107745 ttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaa 107844  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
     | ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| ||    
T  107845 attaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaatt 107944  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 257  Q
    || ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  107945 atcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc 226  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  227 atcaaagttggagcacgaattt 248  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 249  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 41647 - 41911
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||  ||| || ||||||||||||||| ||| |  ||  | |  |||    
T  41647 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataat 41746  T
Q  102 tcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    ||||| |||||||  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||    
T  41747 tcaacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatt 41845  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    || ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| ||||||    
T  41846 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  298 aaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 264
Target Start/End: Complemental strand, 798 - 534
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||| ||||| | |||||||| |||||||| | ||||||||||||| |||||||| ||||||| | | ||||||||||  |||||||||||| || |||    
T  798 tcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaat 699  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
      |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  698 ctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 599  T
Q  200 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  598 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 34726 - 34460
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctca 99  Q
    ||||||||||||||||||||||| ||||||||    |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||    
T  34726 ttcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctca 34627  T
Q  100 attcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
    ||||||| ||||| |  |||| |||| | |||  | |||||||||| ||||||  |||| |||| | || |||||| ||| | ||||||||||||||| |    
T  34626 attcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaat 34527  T
Q  198 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    ||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
T  34526 tatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  232 agttggagcacgaatttagcaacaat 257  Q
    ||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 2961 - 3215
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaa 100  Q
    |||| |||||| |||||||||| |||| ||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| |||||    
T  2961 tcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaa 3060  T
Q  101 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    |||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||    
T  3061 ttcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatt 3160  T
Q  199 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 253  Q
    || ||||||||||| ||||||||||| ||||| ||   |||||||||||||||||    
T  3161 atcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 9601 - 9371
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | |||||     
T  9601 tcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaa 9502  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  9501 ttaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 9402  T
Q  200 ttatcaattcatgcatacaaacatatcatca 230  Q
    | ||||||||||||||||||||||| |||||    
T  9401 tcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 16499 - 16269
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | |||||     
T  16499 tcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaa 16400  T
Q  102 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 199  Q
    | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  16399 ttaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16300  T
Q  200 ttatcaattcatgcatacaaacatatcatca 230  Q
    | ||||||||||||||||||||||| |||||    
T  16299 tcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  305 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  305 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 380  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 380  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 380  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5468 - 5254
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| | |||||| | || |||||| ||  |||||||| |||| |||  | ||||||||||| |||||||||| | |||||    
T  5468 ttcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaa 5370  T
Q  101 ttcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 197  Q
     | ||| |||||    |||| |||| ||| |||  ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |    
T  5369 attaacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaat 5271  T
Q  198 tattatcaattcatgca 214  Q
    ||| |||||||||||||    
T  5270 tatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 247  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  232 agttggagcacgaatttagca 252  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 167 - 283
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  232 agttggagcacgaattt 248  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  305 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 3720 - 3936
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 100  Q
    ||||||||||||||||||||||| | ||||||   || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | |||||    
T  3720 ttcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaa 3819  T
Q  101 ttcaactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacact 197  Q
     | ||| ||||| |  |||| |||| | ||| | |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| |    
T  3820 attaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaat 3919  T
Q  198 tattatcaattcatgca 214  Q
    ||| |||||||||||||    
T  3920 tatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 9381 - 9480
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  9381 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 42996 - 43226
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||| |||||| | |||||     
T  42996 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaa 43095  T
Q  102 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 198  Q
    | ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  43096 ttaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 43195  T
Q  199 attatcaattcatgcatacaaacatatcatc 229  Q
    || ||||||||||||||| ||||||| ||||    
T  43196 atcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 231  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  232 agttggagcacgaatttagca 252  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 307 - 386
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 307 - 386
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 386
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 386  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  132 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 230  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  135 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 234  Q
    |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  235 tggagcacgaatttagcaa 253  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 54415 - 54630
Alignment:
Q  2 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 101  Q
    ||||||||||||||| |||||||||||||||   |||||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| |    
T  54415 tcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt 54514  T
Q  102 tcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatacact 197  Q
    ||||| ||||||| || ||||||| | |||  | |||| |||||||||||  ||||| ||||||  || ||||||| ||| | ||| ||||||||||| |    
T  54515 tcaacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaat 54613  T
Q  198 tattatcaattcatgca 214  Q
    ||| |||||||||||||    
T  54614 tatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 94 - 164
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 377  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 381  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  307 tgattatgataaagactaacccccttaccttaattatc 344  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  181 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 264  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3210 - 3262
Alignment:
Q  5 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 57  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||  ||||||||    
T  3210 tcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatc 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48512 - 48603
Alignment:
Q  1 ttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatca 92  Q
    ||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | |||||||| || ||||||||||    
T  48512 ttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 442 - 499
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

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Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0123; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 8007 - 8087
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 81  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||   ||||| |||||||||||||||    
T  8007 tcatcaccaattcatgaattatgaatacccaagctatgaatcatcaacaacaacatcacatagcaacaacaacatcaattg 8087  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  139 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 236  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  237 gagcacgaatttagcaacaat 257  Q
    ||||||||||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  306 atgattatgataaagactaacccccttaccttaa 339  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0032; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 104872 - 104793
Alignment:
Q  2 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 80  Q
    ||||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||    
T  104872 tcatcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

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Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  295 acaaaatgatgatgattatgataaagactaacccccttacctta 338  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 197477 - 197390
Alignment:
Q  27 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 114  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
T  197477 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacat 197390  T

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Target: scaffold0409 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  210 atgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  210 atgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 632 - 689
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 2471 - 2532
Alignment:
Q  20 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 81  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| |||||||||||||||    
T  2471 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 248  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  322 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 379  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 2548 - 2612
Alignment:
Q  27 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc 91  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||    
T  2548 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 10868 - 10908
Alignment:
Q  207 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 247  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  306 atgattatgataaagactaacccccttacctta 338  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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