View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16907_low_2 (Length: 462)

Name: NF16907_low_2
Description: NF16907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16907_low_2
NF16907_low_2
[»] chr4 (57 HSPs)
chr4 (12-458)||(4608671-4609116)
chr4 (415-453)||(33389896-33389934)
chr4 (411-453)||(47683476-47683518)
chr4 (411-458)||(4505831-4505877)
chr4 (411-458)||(48458464-48458511)
chr4 (411-453)||(20004775-20004817)
chr4 (411-443)||(28511722-28511754)
chr4 (411-443)||(28513521-28513553)
chr4 (411-451)||(54055336-54055376)
chr4 (411-458)||(1237541-1237588)
chr4 (411-446)||(52635955-52635990)
chr4 (419-449)||(22160396-22160426)
chr4 (419-449)||(23315945-23315975)
chr4 (411-453)||(24916049-24916091)
chr4 (411-453)||(28477054-28477096)
chr4 (419-453)||(31444957-31444991)
chr4 (419-453)||(33997722-33997756)
chr4 (419-453)||(38490897-38490931)
chr4 (419-453)||(48458079-48458113)
chr4 (411-444)||(20681020-20681053)
chr4 (411-444)||(23628113-23628146)
chr4 (411-440)||(25881839-25881868)
chr4 (411-444)||(27746684-27746717)
chr4 (411-444)||(35519437-35519470)
chr4 (420-453)||(45637842-45637875)
chr4 (411-443)||(742956-742988)
chr4 (413-445)||(4088088-4088120)
chr4 (411-443)||(6028628-6028660)
chr4 (411-443)||(8151027-8151059)
chr4 (411-443)||(9097956-9097988)
chr4 (411-443)||(10262460-10262492)
chr4 (411-443)||(11180730-11180762)
chr4 (411-443)||(13860144-13860176)
chr4 (411-443)||(15518427-15518459)
chr4 (411-443)||(17976270-17976302)
chr4 (416-444)||(19587493-19587521)
chr4 (411-443)||(21561963-21561995)
chr4 (411-443)||(24080531-24080563)
chr4 (411-443)||(26097870-26097902)
chr4 (410-450)||(26877684-26877724)
chr4 (411-443)||(28361712-28361744)
chr4 (414-458)||(28588349-28588393)
chr4 (413-453)||(31106162-31106202)
chr4 (411-443)||(32137868-32137900)
chr4 (411-443)||(32201173-32201205)
chr4 (411-443)||(34664673-34664705)
chr4 (411-443)||(39651558-39651590)
chr4 (411-443)||(39657536-39657568)
chr4 (411-443)||(40664852-40664884)
chr4 (411-443)||(41986740-41986772)
chr4 (411-443)||(43329484-43329516)
chr4 (420-452)||(44670477-44670509)
chr4 (411-443)||(44856004-44856036)
chr4 (411-443)||(46046014-46046046)
chr4 (411-443)||(51153306-51153338)
chr4 (411-443)||(51187486-51187518)
chr4 (411-443)||(51449550-51449582)
[»] chr8 (48 HSPs)
chr8 (120-372)||(43219288-43219540)
chr8 (413-456)||(4438566-4438609)
chr8 (416-458)||(11420411-11420453)
chr8 (411-453)||(3501388-3501430)
chr8 (411-453)||(31261300-31261342)
chr8 (411-453)||(34882316-34882358)
chr8 (415-452)||(10794644-10794681)
chr8 (411-453)||(1351706-1351749)
chr8 (419-458)||(2442283-2442322)
chr8 (411-458)||(34151143-34151189)
chr8 (411-453)||(1284186-1284228)
chr8 (419-449)||(1657948-1657978)
chr8 (419-449)||(6335895-6335925)
chr8 (411-453)||(12261693-12261735)
chr8 (419-453)||(15920100-15920134)
chr8 (419-453)||(39131799-39131833)
chr8 (411-444)||(38137937-38137970)
chr8 (412-453)||(41372505-41372546)
chr8 (411-443)||(170413-170445)
chr8 (411-443)||(2185074-2185106)
chr8 (411-451)||(3541211-3541251)
chr8 (413-453)||(4437487-4437527)
chr8 (411-443)||(6303123-6303155)
chr8 (411-443)||(6746981-6747013)
chr8 (411-443)||(6815381-6815413)
chr8 (411-443)||(11579015-11579047)
chr8 (411-443)||(11924119-11924151)
chr8 (413-453)||(17950023-17950063)
chr8 (411-443)||(20666054-20666086)
chr8 (411-443)||(23969039-23969071)
chr8 (411-443)||(27914338-27914370)
chr8 (411-443)||(27960757-27960789)
chr8 (413-453)||(29767350-29767390)
chr8 (411-443)||(30551416-30551448)
chr8 (411-443)||(33848908-33848940)
chr8 (411-443)||(36059496-36059528)
chr8 (411-443)||(37027304-37027336)
chr8 (411-443)||(37034646-37034678)
chr8 (411-443)||(38139135-38139167)
chr8 (411-443)||(38909109-38909141)
chr8 (411-443)||(39486248-39486280)
chr8 (411-443)||(39525275-39525307)
chr8 (411-443)||(40048889-40048921)
chr8 (411-443)||(41526137-41526169)
chr8 (411-443)||(42063313-42063345)
chr8 (411-443)||(44216166-44216198)
chr8 (411-443)||(44937878-44937910)
chr8 (411-443)||(45139269-45139301)
[»] scaffold0112 (1 HSPs)
scaffold0112 (167-371)||(33194-33398)
[»] chr5 (43 HSPs)
chr5 (121-356)||(15616828-15617063)
chr5 (263-381)||(16042671-16042789)
chr5 (411-453)||(14001117-14001159)
chr5 (411-453)||(29686221-29686263)
chr5 (411-453)||(833892-833934)
chr5 (411-453)||(37516885-37516927)
chr5 (413-458)||(33322250-33322295)
chr5 (416-453)||(40715808-40715845)
chr5 (413-453)||(1539329-1539369)
chr5 (411-451)||(29632710-29632750)
chr5 (419-458)||(23085332-23085371)
chr5 (411-458)||(29663432-29663479)
chr5 (411-458)||(31378193-31378240)
chr5 (419-458)||(35373319-35373358)
chr5 (413-451)||(5730312-5730350)
chr5 (411-445)||(14205324-14205358)
chr5 (14-79)||(17551898-17551964)
chr5 (411-453)||(19565090-19565132)
chr5 (419-449)||(31172286-31172316)
chr5 (415-449)||(35588615-35588649)
chr5 (419-453)||(37142759-37142793)
chr5 (411-453)||(37516555-37516596)
chr5 (419-449)||(41879793-41879823)
chr5 (413-446)||(4460524-4460557)
chr5 (411-452)||(18282264-18282305)
chr5 (411-443)||(790279-790311)
chr5 (411-443)||(2000888-2000920)
chr5 (411-443)||(2463467-2463499)
chr5 (411-443)||(3246651-3246683)
chr5 (411-443)||(10042616-10042648)
chr5 (411-443)||(11832455-11832487)
chr5 (425-453)||(17822386-17822414)
chr5 (411-443)||(19393011-19393043)
chr5 (415-443)||(28400379-28400407)
chr5 (411-443)||(28746538-28746570)
chr5 (411-443)||(29874886-29874918)
chr5 (411-443)||(31298193-31298225)
chr5 (411-443)||(35380633-35380665)
chr5 (411-443)||(36515687-36515719)
chr5 (411-443)||(37461449-37461481)
chr5 (411-443)||(40307683-40307715)
chr5 (411-443)||(40507020-40507052)
chr5 (411-443)||(42416527-42416559)
[»] scaffold0093 (1 HSPs)
scaffold0093 (169-371)||(17597-17799)
[»] chr3 (40 HSPs)
chr3 (411-453)||(2594509-2594551)
chr3 (411-446)||(34230509-34230544)
chr3 (413-452)||(36643583-36643622)
chr3 (411-453)||(21594492-21594534)
chr3 (411-453)||(47409629-47409671)
chr3 (415-453)||(50585774-50585812)
chr3 (411-443)||(10617010-10617042)
chr3 (418-458)||(42618142-42618182)
chr3 (411-450)||(21363659-21363698)
chr3 (419-458)||(28170641-28170680)
chr3 (419-458)||(36637192-36637231)
chr3 (419-458)||(47968346-47968385)
chr3 (411-453)||(65983-66025)
chr3 (416-458)||(12170948-12170990)
chr3 (411-453)||(13867251-13867292)
chr3 (419-453)||(17583248-17583282)
chr3 (411-453)||(41988470-41988512)
chr3 (419-449)||(44177008-44177038)
chr3 (419-452)||(54114377-54114410)
chr3 (410-443)||(54831503-54831536)
chr3 (411-443)||(915855-915887)
chr3 (411-443)||(5254905-5254937)
chr3 (413-445)||(8231690-8231722)
chr3 (411-443)||(33899744-33899776)
chr3 (411-451)||(34413314-34413354)
chr3 (411-443)||(35530037-35530069)
chr3 (411-443)||(35690933-35690965)
chr3 (418-458)||(36170479-36170519)
chr3 (411-443)||(37413171-37413203)
chr3 (410-442)||(39199172-39199204)
chr3 (411-443)||(39721084-39721116)
chr3 (411-443)||(39798993-39799025)
chr3 (411-443)||(41991886-41991918)
chr3 (411-443)||(42188440-42188472)
chr3 (411-443)||(43317073-43317105)
chr3 (411-443)||(44075847-44075879)
chr3 (411-443)||(44762944-44762976)
chr3 (411-443)||(46851172-46851204)
chr3 (411-443)||(50932549-50932581)
chr3 (411-443)||(52468328-52468360)
[»] chr7 (42 HSPs)
chr7 (413-458)||(24650005-24650050)
chr7 (411-450)||(28069670-28069709)
chr7 (411-453)||(38237480-38237522)
chr7 (410-453)||(32358884-32358927)
chr7 (410-453)||(36925323-36925366)
chr7 (411-453)||(35338384-35338426)
chr7 (411-453)||(39959409-39959451)
chr7 (411-453)||(47439798-47439840)
chr7 (413-458)||(10039947-10039992)
chr7 (411-448)||(27425680-27425717)
chr7 (411-443)||(20135582-20135614)
chr7 (411-458)||(7606279-7606326)
chr7 (411-458)||(22711475-22711522)
chr7 (411-458)||(38651681-38651728)
chr7 (411-445)||(1292086-1292120)
chr7 (419-449)||(5096508-5096538)
chr7 (419-453)||(47437799-47437833)
chr7 (424-453)||(3434064-3434093)
chr7 (411-452)||(4094294-4094335)
chr7 (420-453)||(42851125-42851158)
chr7 (411-443)||(4404119-4404151)
chr7 (411-443)||(4406848-4406880)
chr7 (411-443)||(6606427-6606459)
chr7 (411-443)||(6914011-6914043)
chr7 (419-451)||(7192295-7192327)
chr7 (411-443)||(16933679-16933711)
chr7 (411-443)||(16939062-16939094)
chr7 (411-443)||(19036793-19036825)
chr7 (411-443)||(20717811-20717843)
chr7 (411-443)||(20762492-20762524)
chr7 (411-443)||(29488058-29488090)
chr7 (411-451)||(32806602-32806642)
chr7 (411-443)||(33233088-33233120)
chr7 (411-443)||(34285230-34285262)
chr7 (411-443)||(35910100-35910132)
chr7 (411-443)||(37310614-37310646)
chr7 (411-443)||(40036238-40036270)
chr7 (411-443)||(42829474-42829506)
chr7 (411-443)||(43110857-43110889)
chr7 (411-443)||(47139581-47139613)
chr7 (411-443)||(47575988-47576020)
chr7 (411-443)||(47840554-47840586)
[»] scaffold0047 (1 HSPs)
scaffold0047 (413-453)||(65555-65595)
[»] chr1 (39 HSPs)
chr1 (413-457)||(31239095-31239139)
chr1 (411-458)||(21966268-21966315)
chr1 (411-453)||(5257088-5257130)
chr1 (411-453)||(10427369-10427411)
chr1 (411-453)||(12294476-12294518)
chr1 (411-452)||(27348988-27349029)
chr1 (411-443)||(11606843-11606875)
chr1 (411-443)||(44821040-44821072)
chr1 (411-450)||(6295046-6295085)
chr1 (411-453)||(43019496-43019539)
chr1 (411-458)||(49840473-49840520)
chr1 (420-458)||(11463911-11463949)
chr1 (419-453)||(17124629-17124663)
chr1 (411-441)||(33218427-33218457)
chr1 (419-453)||(35112429-35112463)
chr1 (411-453)||(38901165-38901207)
chr1 (420-453)||(2653377-2653410)
chr1 (411-452)||(9848383-9848424)
chr1 (410-443)||(34652115-34652148)
chr1 (410-443)||(44065574-44065607)
chr1 (411-443)||(1322737-1322769)
chr1 (411-451)||(6013007-6013046)
chr1 (411-443)||(7308671-7308703)
chr1 (420-452)||(7910074-7910106)
chr1 (414-458)||(8659239-8659283)
chr1 (411-443)||(16096696-16096728)
chr1 (411-443)||(17366566-17366598)
chr1 (411-443)||(18090833-18090865)
chr1 (411-443)||(18109286-18109318)
chr1 (411-443)||(24473770-24473802)
chr1 (411-443)||(33932743-33932775)
chr1 (411-443)||(39729424-39729456)
chr1 (411-443)||(39879356-39879388)
chr1 (411-443)||(43122383-43122415)
chr1 (411-443)||(43257203-43257235)
chr1 (413-445)||(44440433-44440465)
chr1 (411-443)||(46040783-46040815)
chr1 (411-443)||(49571029-49571061)
chr1 (411-443)||(50397617-50397649)
[»] chr6 (20 HSPs)
chr6 (411-458)||(8866859-8866906)
chr6 (411-453)||(32279611-32279653)
chr6 (413-449)||(29729665-29729701)
chr6 (419-458)||(32570372-32570411)
chr6 (416-458)||(3054388-3054430)
chr6 (419-453)||(4578010-4578044)
chr6 (419-453)||(15926177-15926211)
chr6 (411-453)||(33007743-33007785)
chr6 (419-453)||(34806414-34806448)
chr6 (416-449)||(1930785-1930818)
chr6 (411-444)||(8872564-8872597)
chr6 (410-447)||(28219488-28219525)
chr6 (411-443)||(173281-173313)
chr6 (411-443)||(246997-247029)
chr6 (411-443)||(6018792-6018824)
chr6 (411-443)||(7540930-7540962)
chr6 (411-443)||(12582920-12582952)
chr6 (411-443)||(13459383-13459415)
chr6 (411-443)||(28231634-28231666)
chr6 (411-443)||(34318766-34318798)
[»] chr2 (41 HSPs)
chr2 (411-453)||(28416984-28417026)
chr2 (413-453)||(11090128-11090168)
chr2 (411-458)||(12599551-12599598)
chr2 (419-458)||(23914615-23914654)
chr2 (411-453)||(8904952-8904994)
chr2 (411-453)||(11681636-11681678)
chr2 (411-453)||(11694210-11694252)
chr2 (413-458)||(38502279-38502325)
chr2 (411-458)||(33201267-33201314)
chr2 (414-456)||(960300-960342)
chr2 (419-453)||(1071697-1071731)
chr2 (411-453)||(3752474-3752516)
chr2 (416-458)||(14750399-14750441)
chr2 (411-445)||(27649240-27649274)
chr2 (419-449)||(31054321-31054351)
chr2 (415-453)||(37242075-37242113)
chr2 (419-453)||(40303020-40303054)
chr2 (411-452)||(2001197-2001238)
chr2 (412-449)||(25637641-25637678)
chr2 (416-453)||(27158720-27158757)
chr2 (411-452)||(44019445-44019486)
chr2 (411-443)||(668514-668546)
chr2 (411-443)||(1117851-1117883)
chr2 (411-443)||(1995588-1995620)
chr2 (411-443)||(3079541-3079573)
chr2 (411-443)||(3708031-3708063)
chr2 (411-443)||(6345383-6345415)
chr2 (411-443)||(9799787-9799819)
chr2 (411-443)||(11869353-11869385)
chr2 (411-443)||(13552121-13552153)
chr2 (411-443)||(14325860-14325892)
chr2 (413-453)||(16573872-16573912)
chr2 (411-443)||(22077982-22078014)
chr2 (411-443)||(28499894-28499926)
chr2 (411-443)||(32292233-32292265)
chr2 (411-443)||(35287869-35287901)
chr2 (411-443)||(35360746-35360778)
chr2 (411-443)||(38709530-38709562)
chr2 (411-443)||(38878963-38878995)
chr2 (411-443)||(40202054-40202086)
chr2 (411-443)||(41452657-41452689)
[»] scaffold1017 (1 HSPs)
scaffold1017 (419-453)||(2039-2073)
[»] scaffold0035 (1 HSPs)
scaffold0035 (419-449)||(81865-81895)
[»] scaffold0018 (1 HSPs)
scaffold0018 (419-453)||(36830-36864)
[»] scaffold0009 (1 HSPs)
scaffold0009 (410-448)||(53727-53765)
[»] scaffold1777 (1 HSPs)
scaffold1777 (419-452)||(615-648)
[»] scaffold0038 (2 HSPs)
scaffold0038 (410-447)||(19986-20023)
scaffold0038 (411-443)||(32131-32163)
[»] scaffold0283 (1 HSPs)
scaffold0283 (411-443)||(9218-9250)
[»] scaffold0078 (1 HSPs)
scaffold0078 (415-443)||(5869-5897)
[»] scaffold0003 (1 HSPs)
scaffold0003 (410-458)||(350902-350950)


Alignment Details
Target: chr4 (Bit Score: 356; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 12 - 458
Target Start/End: Complemental strand, 4609116 - 4608671
Alignment:
Q  12 tactatatttaactaaaatatatggatttcagctgactttttcactttcaattacaccttaaacaaatcatgtaaaaatttatctattctgttgatgtct 111  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   || | |||||||||||||||| ||||||||||||    
T  4609116 tactatatataactaaaatatatggatttcagctgactttttcactttcaattacaccttaaa---ataacgtaaaaatttatctatactgttgatgtct 4609020  T
Q  112 atacttagaaaaatccctcacaaagtttttccccacactatttccatctatgcggtccccattcaacaacaatgactcatcaagtatagatatagagtga 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  4609019 atacttagaaaaatccctcacaaagtttttccccacactatttccatctatgcggtccccattcaaaaaccatgactcatgaagtatagatatagagtga 4608920  T
Q  212 ctaataccaatacacaaatgcgacccatggtgcactatgaagc--acgcctttaaaatacttctcgattcatagctaggattgtgacctaaattttccgt 309  Q
    || ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||||| |||    
T  4608919 ctcataccaatacacaaatgtgacccatggtgcactatgaagcgtacgcctttaaaatacttctcgatacataactaggattgtgacctaaatttttcgt 4608820  T
Q  310 caagtagttacaggaaggaaaataccgagccttgtaaatacgagagacaagagaatcaggttcaatctgaaagtagttacatgaagaaacgtatcaagcc 409  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||    
T  4608819 caagtagttacagaaaggaaaataccgagccttgtaaatacgagagacaagagaatcaggttcggtctgaaagtagttacatgaaggaacgtatcaagcc 4608720  T
Q  410 ttgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4608719 ttgtcattcaaaaagataagaatttatattatatttgttatattgttgg 4608671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 415 - 453
Target Start/End: Complemental strand, 33389934 - 33389896
Alignment:
Q  415 attcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33389934 attcaaaaagataagaatttatattatatttgttatatt 33389896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 47683476 - 47683518
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  47683476 tgtcattcaaaaatataagaatttatattatatttgttatatt 47683518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 4505831 - 4505877
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  4505831 tgtcattcaaaaagataagaatttatattatattt-ttatattgttgg 4505877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 48458464 - 48458511
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  48458464 tgtcgttcaaaaaaataagaatttatattatatttgttatattattgg 48458511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 20004817 - 20004775
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  20004817 tgtcattaaaaaatataagaatttatattatatttgttatatt 20004775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 28511754 - 28511722
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||||||    
T  28511754 tgtcattcaaaaagataagaatttatattatat 28511722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 28513521 - 28513553
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||||||    
T  28513521 tgtcattcaaaaagataagaatttatattatat 28513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 451
Target Start/End: Original strand, 54055336 - 54055376
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttata 451  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  54055336 tgtcgttcaaaaatataagaatttatattatatttgttata 54055376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 1237541 - 1237588
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||| |||||||||||||||||||||||||||  |||||| ||||    
T  1237541 tgtcattaaaaaagataagaatttatattatattttctatattgttgg 1237588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 446
Target Start/End: Complemental strand, 52635990 - 52635955
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttg 446  Q
    ||||||||||||| ||||||||||||||||||||||    
T  52635990 tgtcattcaaaaatataagaatttatattatatttg 52635955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Original strand, 22160396 - 22160426
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  22160396 aaaaagataagaatttatattatatttgtta 22160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Original strand, 23315945 - 23315975
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  23315945 aaaaagataagaatttatattatatttgtta 23315975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 24916049 - 24916091
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||    
T  24916049 tgtcattaaaaaagaaaagaaattatattatatttgttatatt 24916091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 28477096 - 28477054
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||| |||||||  |||||||||||||||||||||||||||||    
T  28477096 tgtctttcaaaataataagaatttatattatatttgttatatt 28477054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 31444991 - 31444957
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    ||||| |||||||||||||||||||||||||||||    
T  31444991 aaaaatataagaatttatattatatttgttatatt 31444957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 33997756 - 33997722
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    ||||| |||||||||||||||||||||||||||||    
T  33997756 aaaaaaataagaatttatattatatttgttatatt 33997722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 38490931 - 38490897
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||| ||||||||||||||||||    
T  38490931 aaaaagataagaatttgtattatatttgttatatt 38490897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 48458079 - 48458113
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||| ||||||||||||||||||||||    
T  48458079 aaaaagataagactttatattatatttgttatatt 48458113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Complemental strand, 20681053 - 20681020
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatt 444  Q
    ||||||| ||||||||||||||||||||||||||    
T  20681053 tgtcatttaaaaagataagaatttatattatatt 20681020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Complemental strand, 23628146 - 23628113
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatt 444  Q
    ||||||| ||||||||||||||||||||||||||    
T  23628146 tgtcatttaaaaagataagaatttatattatatt 23628113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 440
Target Start/End: Complemental strand, 25881868 - 25881839
Alignment:
Q  411 tgtcattcaaaaagataagaatttatatta 440  Q
    ||||||||||||||||||||||||||||||    
T  25881868 tgtcattcaaaaagataagaatttatatta 25881839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Complemental strand, 27746717 - 27746684
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatt 444  Q
    ||||||| ||||||||||||||||||||||||||    
T  27746717 tgtcattgaaaaagataagaatttatattatatt 27746684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Original strand, 35519437 - 35519470
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatt 444  Q
    |||||||||||||||||||| |||||||||||||    
T  35519437 tgtcattcaaaaagataagattttatattatatt 35519470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 453
Target Start/End: Complemental strand, 45637875 - 45637842
Alignment:
Q  420 aaaagataagaatttatattatatttgttatatt 453  Q
    |||| |||||||||||||||||||||||||||||    
T  45637875 aaaatataagaatttatattatatttgttatatt 45637842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 742956 - 742988
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  742956 tgtctttcaaaaagataagaatttatattatat 742988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 4088088 - 4088120
Alignment:
Q  413 tcattcaaaaagataagaatttatattatattt 445  Q
    ||||||||||| |||||||||||||||||||||    
T  4088088 tcattcaaaaacataagaatttatattatattt 4088120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 6028660 - 6028628
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  6028660 tgtcattaaaaaagataagaatttatattatat 6028628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 8151059 - 8151027
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  8151059 tgtcatttaaaaagataagaatttatattatat 8151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 9097956 - 9097988
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  9097956 tgtctttcaaaaagataagaatttatattatat 9097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 10262460 - 10262492
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  10262460 tgtctttcaaaaagataagaatttatattatat 10262492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 11180762 - 11180730
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  11180762 tgtcatttaaaaagataagaatttatattatat 11180730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 13860176 - 13860144
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  13860176 tgtcattaaaaaagataagaatttatattatat 13860144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 15518459 - 15518427
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  15518459 tgtctttcaaaaagataagaatttatattatat 15518427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 17976302 - 17976270
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  17976302 tgtcatttaaaaagataagaatttatattatat 17976270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 444
Target Start/End: Complemental strand, 19587521 - 19587493
Alignment:
Q  416 ttcaaaaagataagaatttatattatatt 444  Q
    |||||||||||||||||||||||||||||    
T  19587521 ttcaaaaagataagaatttatattatatt 19587493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 21561995 - 21561963
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  21561995 tgtctttcaaaaagataagaatttatattatat 21561963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 24080531 - 24080563
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  24080531 tgtctttcaaaaagataagaatttatattatat 24080563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 26097870 - 26097902
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  26097870 tgtcatttaaaaagataagaatttatattatat 26097902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 26877724 - 26877684
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatatttgttat 450  Q
    |||| ||||| ||||||||||||||||||||||||| ||||    
T  26877724 ttgttattcacaaagataagaatttatattatatttattat 26877684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 28361712 - 28361744
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  28361712 tgtcatttaaaaagataagaatttatattatat 28361744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 28588393 - 28588349
Alignment:
Q  414 cattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||| ||||||||||| |||||||||||| |||||||||| ||||    
T  28588393 cattaaaaaagataaggatttatattatagttgttatattgttgg 28588349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 31106162 - 31106202
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  31106162 tcattcaaaaagataagaattgaaattatttttgttatatt 31106202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 32137900 - 32137868
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||||||||||||||||| |||||||||||    
T  32137900 tgtcattcaaaaagataagaagttatattatat 32137868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 32201173 - 32201205
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  32201173 tgtcagtcaaaaagataagaatttatattatat 32201205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 34664705 - 34664673
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  34664705 tgtcatttaaaaagataagaatttatattatat 34664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 39651590 - 39651558
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  39651590 tgtcatttaaaaagataagaatttatattatat 39651558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 39657568 - 39657536
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  39657568 tgtcatttaaaaagataagaatttatattatat 39657536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 40664884 - 40664852
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  40664884 tgtcagtcaaaaagataagaatttatattatat 40664852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 41986740 - 41986772
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  41986740 tgtctttcaaaaagataagaatttatattatat 41986772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 43329516 - 43329484
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  43329516 tgtctttcaaaaagataagaatttatattatat 43329484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 420 - 452
Target Start/End: Original strand, 44670477 - 44670509
Alignment:
Q  420 aaaagataagaatttatattatatttgttatat 452  Q
    |||| ||||||||||||||||||||||||||||    
T  44670477 aaaaaataagaatttatattatatttgttatat 44670509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 44856004 - 44856036
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||||||||||||||||||| |||||||||    
T  44856004 tgtcattcaaaaagataagaattcatattatat 44856036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 46046014 - 46046046
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  46046014 tgtcatttaaaaagataagaatttatattatat 46046046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 51153338 - 51153306
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  51153338 tgtcatttaaaaagataagaatttatattatat 51153306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 51187518 - 51187486
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  51187518 tgtcatttaaaaagataagaatttatattatat 51187486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 51449582 - 51449550
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  51449582 tgtctttcaaaaagataagaatttatattatat 51449550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 372
Target Start/End: Original strand, 43219288 - 43219540
Alignment:
Q  120 aaaaatccctcacaaagtttttccccacactatttccatctatgcggtccccattcaacaacaatgactcatcaagtatagatatagagtgactaatacc 219  Q
    ||||||||||||||||||||   |||| | |||||||||| ||||||||||||||||||||| | |  ||||||||||| |||||||||||||   ||||    
T  43219288 aaaaatccctcacaaagtttgcacccataatatttccatcaatgcggtccccattcaacaaccaaggttcatcaagtattgatatagagtgacccgtacc 43219387  T
Q  220 aatacacaaatgcgacccatggtgcactatgaagcacgcctttaaaatacttctcgattcatagctaggattgtgacctaaattttccgtcaagtagtta 319  Q
    ||||||| || ||| ||||  | |||||||||| | |||||| |||||||||||| |  ||||||||||||||||||| |||||   |||||||||  ||    
T  43219388 aatacaccaacgcgccccaccgcgcactatgaaacgcgccttcaaaatacttctccaggcatagctaggattgtgacccaaattagtcgtcaagtaacta 43219487  T
Q  320 caggaaggaaaataccgagccttgtaaatacgagagacaagagaatcaggttc 372  Q
       ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  43219488 tgagaaggaaaatatcgagccttgtaaatgcgagagacaagagaatcaggttc 43219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 4438566 - 4438609
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatattctt 456  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  4438566 tcattaaaaaagataagaatttatattatatttgttatattctt 4438609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 11420453 - 11420411
Alignment:
Q  416 ttcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  11420453 ttcaaaaagataagaatttatattatatttgttatattgttgg 11420411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 3501430 - 3501388
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  3501430 tgtcattcaaaatgataagaacttatattatatttgttatatt 3501388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 31261342 - 31261300
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  31261342 tgtcattaaaaaagataagaaattatattatatttgttatatt 31261300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 34882316 - 34882358
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  34882316 tgtcattcaaaatgataataatttatattatatttgttatatt 34882358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 452
Target Start/End: Complemental strand, 10794681 - 10794644
Alignment:
Q  415 attcaaaaagataagaatttatattatatttgttatat 452  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10794681 attcaaaaagataagaatttatgttatatttgttatat 10794644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 1351706 - 1351749
Alignment:
Q  411 tgtcattcaaaaagataag-aatttatattatatttgttatatt 453  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  1351706 tgtcattcaaaaatataaggaatttatattatatttgttatatt 1351749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 2442283 - 2442322
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  2442283 aaaaagataaaaatttatattatatttgttatattattgg 2442322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 34151143 - 34151189
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  34151143 tgtcatttaaaaagataagaatttatattatattt-ttatattgttgg 34151189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 1284186 - 1284228
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||  ||||||| ||||||||||||||||    
T  1284186 tgtcattcaaaaagatacaaatttatgttatatttgttatatt 1284228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Original strand, 1657948 - 1657978
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  1657948 aaaaagataagaatttatattatatttgtta 1657978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Original strand, 6335895 - 6335925
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  6335895 aaaaagataagaatttatattatatttgtta 6335925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 12261693 - 12261735
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| ||||||||||||||||||||||||| | |||||||    
T  12261693 tgtcatttaaaaagataagaatttatattatatatattatatt 12261735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 15920100 - 15920134
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||| ||||||||||||||||||    
T  15920100 aaaaagataagaatttttattatatttgttatatt 15920134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 39131799 - 39131833
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||| ||||||||||||||||||||    
T  39131799 aaaaagataagaatatatattatatttgttatatt 39131833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Original strand, 38137937 - 38137970
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatt 444  Q
    ||||||| ||||||||||||||||||||||||||    
T  38137937 tgtcatttaaaaagataagaatttatattatatt 38137970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 41372505 - 41372546
Alignment:
Q  412 gtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||| ||||| ||||||||||||||||||| |||||||||    
T  41372505 gtcattaaaaaaaataagaatttatattatatctgttatatt 41372546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 170413 - 170445
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  170413 tgtcaatcaaaaagataagaatttatattatat 170445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 2185074 - 2185106
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  2185074 tgtcagtcaaaaagataagaatttatattatat 2185106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 451
Target Start/End: Original strand, 3541211 - 3541251
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttata 451  Q
    |||||||||||||||||||||  || |||||||||||||||    
T  3541211 tgtcattcaaaaagataagaaaataaattatatttgttata 3541251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 4437527 - 4437487
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||| ||||| |||||||||||||||||||||| ||||||    
T  4437527 tcattaaaaaatataagaatttatattatatttgctatatt 4437487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 6303123 - 6303155
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  6303123 tgtctttcaaaaagataagaatttatattatat 6303155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 6747013 - 6746981
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  6747013 tgtcatttaaaaagataagaatttatattatat 6746981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 6815413 - 6815381
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  6815413 tgtcagtcaaaaagataagaatttatattatat 6815381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 11579047 - 11579015
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  11579047 tgtcatttaaaaagataagaatttatattatat 11579015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 11924151 - 11924119
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  11924151 tgtcagtcaaaaagataagaatttatattatat 11924119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 17950023 - 17950063
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||| ||||| ||||| |||||||||||||||||||||||    
T  17950023 tcattaaaaaaaataaggatttatattatatttgttatatt 17950063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 20666054 - 20666086
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  20666054 tgtctttcaaaaagataagaatttatattatat 20666086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 23969039 - 23969071
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  23969039 tgtctttcaaaaagataagaatttatattatat 23969071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 27914338 - 27914370
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||||||||||||||||||| |||||||||    
T  27914338 tgtcattcaaaaagataagaattcatattatat 27914370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 27960757 - 27960789
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||||||||||||||||||| |||||||||    
T  27960757 tgtcattcaaaaagataagaattcatattatat 27960789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 29767390 - 29767350
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||  |||||||| |||||||||||||||    
T  29767390 tcattcaaaaagatacaaatttatactatatttgttatatt 29767350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 30551416 - 30551448
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  30551416 tgtctttcaaaaagataagaatttatattatat 30551448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 33848908 - 33848940
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  33848908 tgtcatttaaaaagataagaatttatattatat 33848940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 36059496 - 36059528
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  36059496 tgtcatttaaaaagataagaatttatattatat 36059528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 37027336 - 37027304
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  37027336 tgtctttcaaaaagataagaatttatattatat 37027304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 37034678 - 37034646
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  37034678 tgtcatttaaaaagataagaatttatattatat 37034646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 38139167 - 38139135
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  38139167 tgtcatttaaaaagataagaatttatattatat 38139135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 38909141 - 38909109
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  38909141 tgtcatttaaaaagataagaatttatattatat 38909109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 39486248 - 39486280
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  39486248 tgtcatttaaaaagataagaatttatattatat 39486280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 39525307 - 39525275
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  39525307 tgtcatttaaaaagataagaatttatattatat 39525275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 40048889 - 40048921
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  40048889 tgtcatttaaaaagataagaatttatattatat 40048921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 41526169 - 41526137
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  41526169 tgtcatttaaaaagataagaatttatattatat 41526137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 42063313 - 42063345
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  42063313 tgtctttcaaaaagataagaatttatattatat 42063345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 44216166 - 44216198
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  44216166 tgtctttcaaaaagataagaatttatattatat 44216198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 44937910 - 44937878
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  44937910 tgtctttcaaaaagataagaatttatattatat 44937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 45139269 - 45139301
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  45139269 tgtcatttaaaaagataagaatttatattatat 45139301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 167 - 371
Target Start/End: Complemental strand, 33398 - 33194
Alignment:
Q  167 tccccattcaacaacaatgactcatcaagtatagatatagagtgactaataccaatacacaaatgcgacccatggtgcactatgaagcacgcctttaaaa 266  Q
    ||||||||||||||  ||| |||||||| ||| ||||||  |||||  ||||||| |||| || ||| ||||  | | |||||||||| || ||| ||||    
T  33398 tccccattcaacaagcatggctcatcaaatattgatatactgtgacctataccaacacaccaacgcgccccaccgcgtactatgaagcccgacttcaaaa 33299  T
Q  267 tacttctcgattcatagctaggattgtgacctaaattttccgtcaagtagttacaggaaggaaaataccgagccttgtaaatacgagagacaagagaatc 366  Q
    ||||| || || |||| ||||||| |||||||||||||   ||||||||  ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  33298 tacttatccatacataactaggatcgtgacctaaatttgttgtcaagtaactaagagaaggaaaataccgagccttgtaaatacgagagacaagagaatc 33199  T
Q  367 aggtt 371  Q
    |||||    
T  33198 aggtt 33194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 121 - 356
Target Start/End: Complemental strand, 15617063 - 15616828
Alignment:
Q  121 aaaatccctcacaaagtttttccccacactatttccatctatgcggtccccattcaacaacaatgactcatcaagtatagatatagagtgactaatacca 220  Q
    |||||||||||||||||||  ||||||| ||||||||||||||   ||| ||||||  ||| |||  |||||||||||||||||||||||||   |||      
T  15617063 aaaatccctcacaaagtttacccccacaatatttccatctatgtcatcctcattcactaaccatggttcatcaagtatagatatagagtgacccgtactg 15616964  T
Q  221 atacacaaatgcgacccatggtgcactatgaagcacgcctttaaaatacttctcgattcatagctaggattgtgacctaaattttccgtcaagtagttac 320  Q
    |||||| |||||| ||  | |||||||||||||||  |||| ||||||||||||  | |||||||||| ||  |||||| |||   |||||||||  |||    
T  15616963 atacaccaatgcgccctgttgtgcactatgaagcaaaccttcaaaatacttctcattacatagctaggtttacgacctagattcaacgtcaagtaactac 15616864  T
Q  321 aggaaggaaaataccgagccttgtaaatacgagaga 356  Q
     ||||||||| ||||  || ||||||||||||||||    
T  15616863 gggaaggaaagtaccacgcattgtaaatacgagaga 15616828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 16042789 - 16042671
Alignment:
Q  263 aaaatacttctcgattcatagctaggattgtgacctaaattttccgtcaagtagttacaggaaggaaaataccgagccttgtaaatacgagagacaagag 362  Q
    |||||||||||| || |||||||| ||||||||||| ||||| | ||||||||  | || ||||||||||| |||||||||||||||||||||| |||||    
T  16042789 aaaatacttctccatacatagctaagattgtgacctcaatttgctgtcaagtaccttcatgaaggaaaatatcgagccttgtaaatacgagagataagag 16042690  T
Q  363 aatcaggttcaatctgaaa 381  Q
    |||||||||| ||||||||    
T  16042689 aatcaggttctatctgaaa 16042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 14001159 - 14001117
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14001159 tgtcattcaaaaagataagaatttatattatatttgttatatt 14001117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 29686263 - 29686221
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29686263 tgtcattcaaaaagataagaatttatattatatttgttatatt 29686221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 833892 - 833934
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  833892 tgtcattcaaaaagataagaatttagattatatttgttatatt 833934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 37516927 - 37516885
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  37516927 tgtcattcaaaaatataagaatttatattatatttgatatatt 37516885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 33322250 - 33322295
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||  |||||||||||||||||||||||||||| ||||    
T  33322250 tcattcaaaaaattaagaatttatattatatttgttatattgttgg 33322295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 40715808 - 40715845
Alignment:
Q  416 ttcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40715808 ttcaaaaagataagaatttatatcatatttgttatatt 40715845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 1539329 - 1539369
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  1539329 tcattcaaaaagataagaaattatattatattttttatatt 1539369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 451
Target Start/End: Original strand, 29632710 - 29632750
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttata 451  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  29632710 tgtcatttaaaaagataagaatttatattttatttgttata 29632750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Complemental strand, 23085371 - 23085332
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  23085371 aaaaaaataagaatttatattatatttgttatattgttgg 23085332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 29663432 - 29663479
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||| |||||||| | |||||||||||||||||||||||| ||||    
T  29663432 tgtcattaaaaaagattataatttatattatatttgttatattgttgg 29663479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 31378193 - 31378240
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||| |||| |||| ||||||||||||||||||| ||||    
T  31378193 tgtcattcaaaaatataaaaattgatattatatttgttatattgttgg 31378240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 35373319 - 35373358
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  35373319 aaaaagataagaatttttattatatttgttatattgttgg 35373358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 5730350 - 5730312
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttata 451  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  5730350 tcattaaaaaagataagaatttatattatatttattata 5730312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 445
Target Start/End: Complemental strand, 14205358 - 14205324
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatattt 445  Q
    ||||||| |||||||||||||||||||||||||||    
T  14205358 tgtcatttaaaaagataagaatttatattatattt 14205324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 17551898 - 17551964
Alignment:
Q  14 ctatatttaactaaaatatatggatttcagctgactttttcactttcaattaca-ccttaaacaaat 79  Q
    ||||||||||  | |||| |||| ||||||||| |||||||||||||||||| | ||||||||||||    
T  17551898 ctatatttaaagagaatacatggttttcagctgcctttttcactttcaattatacccttaaacaaat 17551964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 19565132 - 19565090
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||| ||||||||| |||||| |||||||    
T  19565132 tgtcattcaaaaagataaaaatttatatcatatttattatatt 19565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Complemental strand, 31172316 - 31172286
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  31172316 aaaaagataagaatttatattatatttgtta 31172286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 449
Target Start/End: Complemental strand, 35588649 - 35588615
Alignment:
Q  415 attcaaaaagataagaatttatattatatttgtta 449  Q
    ||||||||||||||||||||||||||| |||||||    
T  35588649 attcaaaaagataagaatttatattatgtttgtta 35588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 37142759 - 37142793
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||| |||||||||||||||||||    
T  37142759 aaaaagataagaattaatattatatttgttatatt 37142793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 37516596 - 37516555
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  37516596 tgtcattcaaaaa-ataagaatttatattatatttgtcatatt 37516555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Complemental strand, 41879823 - 41879793
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  41879823 aaaaagataagaatttatattatatttgtta 41879793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 446
Target Start/End: Original strand, 4460524 - 4460557
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttg 446  Q
    ||||||||||||||||||| ||||||||||||||    
T  4460524 tcattcaaaaagataagaaattatattatatttg 4460557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Complemental strand, 18282305 - 18282264
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatat 452  Q
    |||||||||||||||||| ||||| |||| ||||||||||||    
T  18282305 tgtcattcaaaaagataaaaatttgtattctatttgttatat 18282264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 790279 - 790311
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  790279 tgtcatttaaaaagataagaatttatattatat 790311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 2000888 - 2000920
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||||||||||||||||||| |||||||||    
T  2000888 tgtcattcaaaaagataagaattcatattatat 2000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 2463499 - 2463467
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  2463499 tgtcatttaaaaagataagaatttatattatat 2463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 3246683 - 3246651
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  3246683 tgtcatttaaaaagataagaatttatattatat 3246651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 10042648 - 10042616
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  10042648 tgtcatttaaaaagataagaatttatattatat 10042616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 11832455 - 11832487
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  11832455 tgtcattaaaaaagataagaatttatattatat 11832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 453
Target Start/End: Original strand, 17822386 - 17822414
Alignment:
Q  425 ataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||||    
T  17822386 ataagaatttatattatatttgttatatt 17822414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 19393043 - 19393011
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  19393043 tgtctttcaaaaagataagaatttatattatat 19393011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 415 - 443
Target Start/End: Original strand, 28400379 - 28400407
Alignment:
Q  415 attcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||    
T  28400379 attcaaaaagataagaatttatattatat 28400407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 28746538 - 28746570
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  28746538 tgtcatttaaaaagataagaatttatattatat 28746570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 29874886 - 29874918
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  29874886 tgtcatttaaaaagataagaatttatattatat 29874918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 31298193 - 31298225
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  31298193 tgtctttcaaaaagataagaatttatattatat 31298225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 35380633 - 35380665
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  35380633 tgtcatttaaaaagataagaatttatattatat 35380665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 36515719 - 36515687
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||||||||||||||||||| |||||||||    
T  36515719 tgtcattcaaaaagataagaattcatattatat 36515687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 37461481 - 37461449
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  37461481 tgtctttcaaaaagataagaatttatattatat 37461449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 40307715 - 40307683
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  40307715 tgtcagtcaaaaagataagaatttatattatat 40307683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 40507020 - 40507052
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  40507020 tgtcatttaaaaagataagaatttatattatat 40507052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 42416559 - 42416527
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  42416559 tgtcatttaaaaagataagaatttatattatat 42416527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 371
Target Start/End: Original strand, 17597 - 17799
Alignment:
Q  169 cccattcaacaacaatgactcatcaagtatagatatagagtgactaataccaatacacaaatgcgacccatggtgcactatgaagcacgcctttaaaata 268  Q
    ||||||| ||||| ||| |||||||| ||| ||||||  |||||   |||||| |||| || ||| ||||  | | |||||||||| || ||| ||||||    
T  17597 cccattcgacaaccatggctcatcaaatattgatataatgtgacctgtaccaacacaccaacgcgccccaccgcgtactatgaagcgcgacttcaaaata 17696  T
Q  269 cttctcgattcatagctaggattgtgacctaaattttccgtcaagtagttacaggaaggaaaataccgagccttgtaaatacgagagacaagagaatcag 368  Q
    ||| || || |||| ||||||| |||||||||||||   ||||||||  |||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  17697 cttatccatacataactaggatcgtgacctaaatttgttgtcaagtaactacgagaaggaaaataccaagccttgtaaatacgagagacaagagaatcag 17796  T
Q  369 gtt 371  Q
    |||    
T  17797 gtt 17799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 2594509 - 2594551
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2594509 tgtcattcaaaaagataagaatttatattatatttgttatatt 2594551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 446
Target Start/End: Complemental strand, 34230544 - 34230509
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttg 446  Q
    ||||||||||||||||||||||||||||||||||||    
T  34230544 tgtcattcaaaaagataagaatttatattatatttg 34230509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 413 - 452
Target Start/End: Complemental strand, 36643622 - 36643583
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatat 452  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  36643622 tcattcaaaacgataagaatttatattatatttgttatat 36643583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 21594534 - 21594492
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  21594534 tgtcactcaaaaagatgagaatttatattatatttgttatatt 21594492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 47409629 - 47409671
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  47409629 tgtcatccaaaaagataagaatttatattatacttgttatatt 47409671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 453
Target Start/End: Original strand, 50585774 - 50585812
Alignment:
Q  415 attcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  50585774 attcaaaaagataaaaatttatattatatttgttatatt 50585812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 10617042 - 10617010
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||||||    
T  10617042 tgtcattcaaaaagataagaatttatattatat 10617010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 458
Target Start/End: Original strand, 42618142 - 42618182
Alignment:
Q  418 caaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  42618142 caaaaagataagaatttatattatatttgttacattgttgg 42618182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 450
Target Start/End: Complemental strand, 21363698 - 21363659
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttat 450  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  21363698 tgtcattcaaaaagataaaaatgtatattatatttgttat 21363659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 28170641 - 28170680
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  28170641 aaaaagataagaatttatattatatttgttacattgttgg 28170680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 36637192 - 36637231
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  36637192 aaaaagataagaatttttattatatttgttatattattgg 36637231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 47968346 - 47968385
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  47968346 aaaaagataagaatttatattacatttgttatattgttgg 47968385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 65983 - 66025
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||| |||| ||||| |||||||||||||    
T  65983 tgtcattcaaaaagataaaaattcatattttatttgttatatt 66025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 12170948 - 12170990
Alignment:
Q  416 ttcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||    
T  12170948 ttcaaaaatataagaatttatattatatttgttacattgttgg 12170990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 13867251 - 13867292
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  13867251 tgtcattcaaaat-ataagaatttatattatatttgttatatt 13867292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 17583248 - 17583282
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||| ||||||||||||||||||    
T  17583248 aaaaagataagaatttttattatatttgttatatt 17583282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 41988470 - 41988512
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||| |||||||||||||||||||||| || |||||||    
T  41988470 tgtcattcataaagataagaatttatattatacttattatatt 41988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Complemental strand, 44177038 - 44177008
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  44177038 aaaaagataagaatttatattatatttgtta 44177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 452
Target Start/End: Original strand, 54114377 - 54114410
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatat 452  Q
    ||||| ||||||||||||||||||||||||||||    
T  54114377 aaaaaaataagaatttatattatatttgttatat 54114410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 54831536 - 54831503
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||| |||||||||||||||||||||||||    
T  54831536 ttgtcattaaaaaagataagaatttatattatat 54831503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 915887 - 915855
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  915887 tgtctttcaaaaagataagaatttatattatat 915855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 5254905 - 5254937
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  5254905 tgtctttcaaaaagataagaatttatattatat 5254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 8231722 - 8231690
Alignment:
Q  413 tcattcaaaaagataagaatttatattatattt 445  Q
    ||||| |||||||||||||||||||||||||||    
T  8231722 tcattaaaaaagataagaatttatattatattt 8231690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 33899776 - 33899744
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  33899776 tgtcatttaaaaagataagaatttatattatat 33899744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 451
Target Start/End: Original strand, 34413314 - 34413354
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttata 451  Q
    |||||||||||||||||| ||||||||||||  ||||||||    
T  34413314 tgtcattcaaaaagataataatttatattattattgttata 34413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 35530037 - 35530069
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  35530037 tgtcatttaaaaagataagaatttatattatat 35530069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 35690933 - 35690965
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  35690933 tgtcagtcaaaaagataagaatttatattatat 35690965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 418 - 458
Target Start/End: Original strand, 36170479 - 36170519
Alignment:
Q  418 caaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||| ||||||||||||||||||||||||| ||| ||||    
T  36170479 caaaaatataagaatttatattatatttgttacattgttgg 36170519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 37413203 - 37413171
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  37413203 tgtcatttaaaaagataagaatttatattatat 37413171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 410 - 442
Target Start/End: Complemental strand, 39199204 - 39199172
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattata 442  Q
    |||||||||||||| ||||||||||||||||||    
T  39199204 ttgtcattcaaaaaaataagaatttatattata 39199172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 39721116 - 39721084
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  39721116 tgtcatttaaaaagataagaatttatattatat 39721084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 39798993 - 39799025
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  39798993 tgtctttcaaaaagataagaatttatattatat 39799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 41991886 - 41991918
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  41991886 tgtcatttaaaaagataagaatttatattatat 41991918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 42188440 - 42188472
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  42188440 tgtcagtcaaaaagataagaatttatattatat 42188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 43317073 - 43317105
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  43317073 tgtcatttaaaaagataagaatttatattatat 43317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 44075847 - 44075879
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  44075847 tgtctttcaaaaagataagaatttatattatat 44075879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 44762944 - 44762976
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  44762944 tgtcatttaaaaagataagaatttatattatat 44762976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 46851172 - 46851204
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||| ||||||||||||||    
T  46851172 tgtcattcaaaaagataataatttatattatat 46851204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 50932581 - 50932549
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  50932581 tgtcagtcaaaaagataagaatttatattatat 50932549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 52468328 - 52468360
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  52468328 tgtctttcaaaaagataagaatttatattatat 52468360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 24650005 - 24650050
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24650005 tcattcaaaaagataagaatttatattatatttgttatattgttgg 24650050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 450
Target Start/End: Complemental strand, 28069709 - 28069670
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttat 450  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28069709 tgtcattcaaaaagataagaatttatattatatttgttat 28069670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 38237522 - 38237480
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  38237522 tgtcattgaaaaagataagaatttatattatatttgttatatt 38237480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 32358884 - 32358927
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||| |||||||||||||||||||||||||||| ||||||    
T  32358884 ttgtcattgaaaaagataagaatttatattatatttggtatatt 32358927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 453
Target Start/End: Complemental strand, 36925366 - 36925323
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  36925366 ttgttattcaaaaagataagaatttatgttatatttgttatatt 36925323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 35338384 - 35338426
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  35338384 tgtcattaaaaaagataagaatttatattatatttattatatt 35338426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 39959409 - 39959451
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  39959409 tgtcattcaaaaaaataataatttatattatatttgttatatt 39959451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 47439840 - 47439798
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  47439840 tgtcattcaaaaagataataatttatattatatttattatatt 47439798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 10039992 - 10039947
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||    
T  10039992 tcattcaaaaagataataatttatattatatttgctatattgttgg 10039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 27425717 - 27425680
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgtt 448  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  27425717 tgtcattcaaaaagatatgaatttatattatatttgtt 27425680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 20135582 - 20135614
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||||||    
T  20135582 tgtcattcaaaaagataagaatttatattatat 20135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 7606279 - 7606326
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||||| ||||||||||||||| |||| ||| ||||    
T  7606279 tgtcattcaaaaagataaaaatttatattatattagttaaattgttgg 7606326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 22711475 - 22711522
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||| ||||    
T  22711475 tgtcattcaaaaaaatatgaatttatattatatttattatatttttgg 22711522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 38651681 - 38651728
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  38651681 tgtcattcaaaaagataagaattcatatcataattgttatattgttgg 38651728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 445
Target Start/End: Complemental strand, 1292120 - 1292086
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatattt 445  Q
    ||||||| |||||||||||||||||||||||||||    
T  1292120 tgtcattaaaaaagataagaatttatattatattt 1292086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Complemental strand, 5096538 - 5096508
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  5096538 aaaaagataagaatttatattatatttgtta 5096508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 47437833 - 47437799
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||||||||||| |||||||    
T  47437833 aaaaagataagaatttatattatattttttatatt 47437799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 453
Target Start/End: Original strand, 3434064 - 3434093
Alignment:
Q  424 gataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||||||||||||||    
T  3434064 gataagaatttatattatatttgttatatt 3434093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Complemental strand, 4094335 - 4094294
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatat 452  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  4094335 tgtcattcaaaaatatgataatttatattatatttgttatat 4094294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 453
Target Start/End: Complemental strand, 42851158 - 42851125
Alignment:
Q  420 aaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||| ||||||||||||||||||    
T  42851158 aaaagataagaatttttattatatttgttatatt 42851125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 4404151 - 4404119
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  4404151 tgtcatttaaaaagataagaatttatattatat 4404119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 4406848 - 4406880
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  4406848 tgtcatttaaaaagataagaatttatattatat 4406880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 6606459 - 6606427
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  6606459 tgtcagtcaaaaagataagaatttatattatat 6606427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 6914011 - 6914043
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  6914011 tgtctttcaaaaagataagaatttatattatat 6914043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 451
Target Start/End: Complemental strand, 7192327 - 7192295
Alignment:
Q  419 aaaaagataagaatttatattatatttgttata 451  Q
    ||||||||||||||||||||||||||| |||||    
T  7192327 aaaaagataagaatttatattatatttattata 7192295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 16933679 - 16933711
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  16933679 tgtcatttaaaaagataagaatttatattatat 16933711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 16939062 - 16939094
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  16939062 tgtcatttaaaaagataagaatttatattatat 16939094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 19036793 - 19036825
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  19036793 tgtctttcaaaaagataagaatttatattatat 19036825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 20717843 - 20717811
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  20717843 tgtctttcaaaaagataagaatttatattatat 20717811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 20762524 - 20762492
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  20762524 tgtctttcaaaaagataagaatttatattatat 20762492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 29488090 - 29488058
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  29488090 tgtctttcaaaaagataagaatttatattatat 29488058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 451
Target Start/End: Original strand, 32806602 - 32806642
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttata 451  Q
    |||||||| |||||| || ||||||||||||||||||||||    
T  32806602 tgtcattccaaaagagaataatttatattatatttgttata 32806642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 33233088 - 33233120
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  33233088 tgtctttcaaaaagataagaatttatattatat 33233120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 34285230 - 34285262
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  34285230 tgtctttcaaaaagataagaatttatattatat 34285262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 35910132 - 35910100
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  35910132 tgtcatttaaaaagataagaatttatattatat 35910100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 37310614 - 37310646
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  37310614 tgtcattaaaaaagataagaatttatattatat 37310646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 40036238 - 40036270
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  40036238 tgtcatttaaaaagataagaatttatattatat 40036270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 42829474 - 42829506
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  42829474 tgtctttcaaaaagataagaatttatattatat 42829506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 43110889 - 43110857
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  43110889 tgtcatttaaaaagataagaatttatattatat 43110857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 47139613 - 47139581
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  47139613 tgtcatttaaaaagataagaatttatattatat 47139581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 47575988 - 47576020
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  47575988 tgtctttcaaaaagataagaatttatattatat 47576020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 47840586 - 47840554
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  47840586 tgtcatttaaaaagataagaatttatattatat 47840554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 65555 - 65595
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  65555 tcattcaaaaagataagaatttatattatatttgttatatt 65595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 31239095 - 31239139
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatattcttg 457  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  31239095 tcatttaaaaagataagaatttatattatatttgttatattcttg 31239139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 21966268 - 21966315
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21966268 tgtcattcaaaaagataagaatttatattatatttgttacattgttgg 21966315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 5257088 - 5257130
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  5257088 tgtcattcaaaaagataagaatttatagtatatttattatatt 5257130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 10427369 - 10427411
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  10427369 tgtcatttaaaaagataagaacttatattatatttgttatatt 10427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 12294476 - 12294518
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  12294476 tgtcattttaaaagataagaatttatattatatttgttatatt 12294518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 27348988 - 27349029
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatat 452  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  27348988 tgtcattcaaaaatataataatttatattatatttgttatat 27349029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 11606843 - 11606875
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||||||    
T  11606843 tgtcattcaaaaagataagaatttatattatat 11606875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 44821072 - 44821040
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||||||    
T  44821072 tgtcattcaaaaagataagaatttatattatat 44821040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 450
Target Start/End: Complemental strand, 6295085 - 6295046
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttat 450  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  6295085 tgtcattcaaaaagataagaatttatgttatatttattat 6295046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 43019539 - 43019496
Alignment:
Q  411 tgtcattcaaaaa-gataagaatttatattatatttgttatatt 453  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  43019539 tgtcattcaaaaaagataagaatttatattatatttgttgtatt 43019496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Complemental strand, 49840520 - 49840473
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||| ||||| |||||||| |||||||||||||||||||| ||||    
T  49840520 tgtcattaaaaaatataagaatgtatattatatttgttatattattgg 49840473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 458
Target Start/End: Original strand, 11463911 - 11463949
Alignment:
Q  420 aaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  11463911 aaaagataagaatttttattatatttgttatattattgg 11463949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 17124663 - 17124629
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||| ||||||||||||    
T  17124663 aaaaagataagaatttatattacatttgttatatt 17124629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 441
Target Start/End: Original strand, 33218427 - 33218457
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattat 441  Q
    |||||||||||||||||||||||||||||||    
T  33218427 tgtcattcaaaaagataagaatttatattat 33218457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 35112429 - 35112463
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||| ||||||    
T  35112429 aaaaagataagaatttatattatatttgctatatt 35112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 38901207 - 38901165
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||| ||| |||||||||||| |||||||    
T  38901207 tgtcattcaaaaagataaaaatctatattatatttattatatt 38901165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 453
Target Start/End: Original strand, 2653377 - 2653410
Alignment:
Q  420 aaaagataagaatttatattatatttgttatatt 453  Q
    |||| |||||||||||||||||||||||||||||    
T  2653377 aaaatataagaatttatattatatttgttatatt 2653410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 9848383 - 9848424
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatat 452  Q
    |||| |||||||||| ||||||||||| ||||||||||||||    
T  9848383 tgtcgttcaaaaagaaaagaatttataatatatttgttatat 9848424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 34652148 - 34652115
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||| |||||||||||||||||||||||||    
T  34652148 ttgtcatttaaaaagataagaatttatattatat 34652115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 44065574 - 44065607
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||||||||||||||||| ||||||||||||    
T  44065574 ttgtcattcaaaaagataagagtttatattatat 44065607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 1322737 - 1322769
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  1322737 tgtcatttaaaaagataagaatttatattatat 1322769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 451
Target Start/End: Original strand, 6013007 - 6013046
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttata 451  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  6013007 tgtcattgaaaaagataa-aatttatattatatttgttata 6013046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 7308671 - 7308703
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  7308671 tgtcatttaaaaagataagaatttatattatat 7308703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 420 - 452
Target Start/End: Original strand, 7910074 - 7910106
Alignment:
Q  420 aaaagataagaatttatattatatttgttatat 452  Q
    |||||||||||||||||||||||||| ||||||    
T  7910074 aaaagataagaatttatattatattttttatat 7910106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 8659239 - 8659283
Alignment:
Q  414 cattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||| |||| ||||| |||||||||||||||||||||||| ||||    
T  8659239 cattgaaaatgataaaaatttatattatatttgttatattgttgg 8659283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 16096728 - 16096696
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  16096728 tgtcagtcaaaaagataagaatttatattatat 16096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 17366566 - 17366598
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  17366566 tgtcatttaaaaagataagaatttatattatat 17366598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 18090865 - 18090833
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  18090865 tgtctttcaaaaagataagaatttatattatat 18090833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 18109318 - 18109286
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  18109318 tgtctttcaaaaagataagaatttatattatat 18109286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 24473770 - 24473802
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  24473770 tgtcatttaaaaagataagaatttatattatat 24473802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 33932775 - 33932743
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  33932775 tgtcatttaaaaagataagaatttatattatat 33932743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 39729424 - 39729456
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  39729424 tgtcatttaaaaagataagaatttatattatat 39729456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 39879356 - 39879388
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  39879356 tgtcatttaaaaagataagaatttatattatat 39879388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 43122415 - 43122383
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||| |||||||||||||||||||||||||||    
T  43122415 tgtcagtcaaaaagataagaatttatattatat 43122383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 43257203 - 43257235
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  43257203 tgtctttcaaaaagataagaatttatattatat 43257235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 44440433 - 44440465
Alignment:
Q  413 tcattcaaaaagataagaatttatattatattt 445  Q
    |||||||||||||||| ||||||||||||||||    
T  44440433 tcattcaaaaagataaaaatttatattatattt 44440465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 46040783 - 46040815
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  46040783 tgtcatttaaaaagataagaatttatattatat 46040815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 49571061 - 49571029
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  49571061 tgtcatttaaaaagataagaatttatattatat 49571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 50397617 - 50397649
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  50397617 tgtctttcaaaaagataagaatttatattatat 50397649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 458
Target Start/End: Complemental strand, 8866906 - 8866859
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  8866906 tgtcattaaaaaagataagaatttatattatatttgttatattgttgg 8866859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 32279653 - 32279611
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  32279653 tgtcattaaaaaagataagaatttatattatatttgttatatt 32279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 449
Target Start/End: Complemental strand, 29729701 - 29729665
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgtta 449  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29729701 tcattaaaaaagataagaatttatattatatttgtta 29729665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Complemental strand, 32570411 - 32570372
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  32570411 aaaaagataagaatttatattatatttgctatattattgg 32570372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 3054388 - 3054430
Alignment:
Q  416 ttcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||    
T  3054388 ttcaaaaatataagaatttatattatatttgttacattgttgg 3054430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 4578044 - 4578010
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||| ||||||    
T  4578044 aaaaagataagaatttatattatatttgctatatt 4578010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 15926211 - 15926177
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||| ||||||||||||||||||    
T  15926211 aaaaagataagaatttttattatatttgttatatt 15926177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 33007743 - 33007785
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||| |||||||  |||||||||||||||||||||||    
T  33007743 tgtcattcaacaagataaagatttatattatatttgttatatt 33007785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 34806448 - 34806414
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||| ||||||||||    
T  34806448 aaaaagataagaatttatattatagttgttatatt 34806414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 449
Target Start/End: Complemental strand, 1930818 - 1930785
Alignment:
Q  416 ttcaaaaagataagaatttatattatatttgtta 449  Q
    |||||||| |||||||||||||||||||||||||    
T  1930818 ttcaaaaatataagaatttatattatatttgtta 1930785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Complemental strand, 8872597 - 8872564
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatt 444  Q
    ||||||| ||||||||||||||||||||||||||    
T  8872597 tgtcattaaaaaagataagaatttatattatatt 8872564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 28219488 - 28219525
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatatttgt 447  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  28219488 ttgtcattgcaaaagataagaatttatattatatttgt 28219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 173281 - 173313
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  173281 tgtcatttaaaaagataagaatttatattatat 173313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 247029 - 246997
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  247029 tgtctttcaaaaagataagaatttatattatat 246997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 6018792 - 6018824
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  6018792 tgtcatttaaaaagataagaatttatattatat 6018824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 7540962 - 7540930
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  7540962 tgtcatttaaaaagataagaatttatattatat 7540930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 12582920 - 12582952
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  12582920 tgtctttcaaaaagataagaatttatattatat 12582952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 13459383 - 13459415
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  13459383 tgtctttcaaaaagataagaatttatattatat 13459415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 28231634 - 28231666
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  28231634 tgtctttcaaaaagataagaatttatattatat 28231666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 34318798 - 34318766
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  34318798 tgtctttcaaaaagataagaatttatattatat 34318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 28416984 - 28417026
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  28416984 tgtcattcaaaaagataagaatttatattatagttgttatatt 28417026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 11090128 - 11090168
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  11090128 tcattcaaaaagataagaatttatattatatttattatatt 11090168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 12599551 - 12599598
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  12599551 tgtcattaagaaagataagaatttatattatatttgttatattattgg 12599598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 23914615 - 23914654
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  23914615 aaaaagataagaatttatattatatttgttatattgttgg 23914654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 8904994 - 8904952
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  8904994 tgtcattcaacaagataagaatttatatcatatttgttatatt 8904952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 11681678 - 11681636
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  11681678 tgtcattcaaaaatataaaaatttatattatatttgttatatt 11681636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 11694252 - 11694210
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  11694252 tgtcattcaaaaatataaaaatttatattatatttgttatatt 11694210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 38502279 - 38502325
Alignment:
Q  413 tcattcaaaaagataagaatttatattata-tttgttatattcttgg 458  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  38502279 tcattcaaaaagataagaatttatattatattttgttatattgttgg 38502325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Original strand, 33201267 - 33201314
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||| || ||||||||||| |||||||||||||||||| ||||    
T  33201267 tgtcattcagaacgataagaatttgtattatatttgttatattgttgg 33201314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 456
Target Start/End: Complemental strand, 960342 - 960300
Alignment:
Q  414 cattcaaaaagataagaatttatattatatttgttatattctt 456  Q
    |||| |||||||||||||||||||  |||||||||||||||||    
T  960342 cattaaaaaagataagaatttatacaatatttgttatattctt 960300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 1071697 - 1071731
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    ||||| |||||||||||||||||||||||||||||    
T  1071697 aaaaaaataagaatttatattatatttgttatatt 1071731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 3752516 - 3752474
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||    
T  3752516 tgtcatttaaaaagataagaatttatattacatttgctatatt 3752474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 14750441 - 14750399
Alignment:
Q  416 ttcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||    
T  14750441 ttcaaaaatataagaatttatattatatttgttacattgttgg 14750399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 445
Target Start/End: Original strand, 27649240 - 27649274
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatattt 445  Q
    ||||||| |||||||||||||||||||||||||||    
T  27649240 tgtcattgaaaaagataagaatttatattatattt 27649274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Original strand, 31054321 - 31054351
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  31054321 aaaaagataagaatttatattatatttgtta 31054351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 453
Target Start/End: Complemental strand, 37242113 - 37242075
Alignment:
Q  415 attcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  37242113 attcaaaaagataagaatttatgttatattttttatatt 37242075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 40303054 - 40303020
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||| ||||||||||||||||||    
T  40303054 aaaaagataagaatttttattatatttgttatatt 40303020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 2001197 - 2001238
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatat 452  Q
    ||||||| |||||| |||||||||||||||||||| ||||||    
T  2001197 tgtcatttaaaaagttaagaatttatattatattttttatat 2001238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 25637678 - 25637641
Alignment:
Q  412 gtcattcaaaaagataagaatttatattatatttgtta 449  Q
    |||||| | |||||||||||||||||||||||||||||    
T  25637678 gtcatttacaaagataagaatttatattatatttgtta 25637641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 27158720 - 27158757
Alignment:
Q  416 ttcaaaaagataagaatttatattatatttgttatatt 453  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  27158720 ttcaaaacgataagaatttatattatagttgttatatt 27158757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 44019445 - 44019486
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatatttgttatat 452  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||    
T  44019445 tgtcattaaaaaaaataagaatttatattatatttattatat 44019486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 668514 - 668546
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  668514 tgtcatttaaaaagataagaatttatattatat 668546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 1117883 - 1117851
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  1117883 tgtcatttaaaaagataagaatttatattatat 1117851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 1995588 - 1995620
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  1995588 tgtctttcaaaaagataagaatttatattatat 1995620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 3079573 - 3079541
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  3079573 tgtcatttaaaaagataagaatttatattatat 3079541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 3708063 - 3708031
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  3708063 tgtctttcaaaaagataagaatttatattatat 3708031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 6345383 - 6345415
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  6345383 tgtctttcaaaaagataagaatttatattatat 6345415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 9799787 - 9799819
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||| ||||||    
T  9799787 tgtcattcaaaaagataagaatttatgttatat 9799819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 11869353 - 11869385
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  11869353 tgtctttcaaaaagataagaatttatattatat 11869385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 13552121 - 13552153
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  13552121 tgtcatttaaaaagataagaatttatattatat 13552153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 14325860 - 14325892
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  14325860 tgtctttcaaaaagataagaatttatattatat 14325892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 16573872 - 16573912
Alignment:
Q  413 tcattcaaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||| ||||| ||||||||||||||||| ||||||    
T  16573872 tcattcaaaatgataaaaatttatattatatttgatatatt 16573912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 22078014 - 22077982
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  22078014 tgtcatttaaaaagataagaatttatattatat 22077982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 28499926 - 28499894
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  28499926 tgtctttcaaaaagataagaatttatattatat 28499894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 32292265 - 32292233
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  32292265 tgtcatttaaaaagataagaatttatattatat 32292233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 35287869 - 35287901
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  35287869 tgtctttcaaaaagataagaatttatattatat 35287901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 35360746 - 35360778
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  35360746 tgtctttcaaaaagataagaatttatattatat 35360778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 38709562 - 38709530
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  38709562 tgtcatttaaaaagataagaatttatattatat 38709530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 38878995 - 38878963
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  38878995 tgtcatttaaaaagataagaatttatattatat 38878963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 40202086 - 40202054
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  40202086 tgtcatttaaaaagataagaatttatattatat 40202054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 41452689 - 41452657
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    ||||||| |||||||||||||||||||||||||    
T  41452689 tgtcatttaaaaagataagaatttatattatat 41452657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 2073 - 2039
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||| ||||||||||||||||||    
T  2073 aaaaagataagaatttttattatatttgttatatt 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Original strand, 81865 - 81895
Alignment:
Q  419 aaaaagataagaatttatattatatttgtta 449  Q
    |||||||||||||||||||||||||||||||    
T  81865 aaaaagataagaatttatattatatttgtta 81895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 36830 - 36864
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatatt 453  Q
    |||||||||||||||| ||||||||||||||||||    
T  36830 aaaaagataagaatttttattatatttgttatatt 36864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 448
Target Start/End: Original strand, 53727 - 53765
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatatttgtt 448  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  53727 ttgtcattaaaaaagataaaaatttatattatatttgtt 53765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1777 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 452
Target Start/End: Original strand, 615 - 648
Alignment:
Q  419 aaaaagataagaatttatattatatttgttatat 452  Q
    ||||| ||||||||||||||||||||||||||||    
T  615 aaaaatataagaatttatattatatttgttatat 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 19986 - 20023
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatatttgt 447  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  19986 ttgtcattgcaaaagataagaatttatattatatttgt 20023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 32131 - 32163
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  32131 tgtctttcaaaaagataagaatttatattatat 32163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 9250 - 9218
Alignment:
Q  411 tgtcattcaaaaagataagaatttatattatat 443  Q
    |||| ||||||||||||||||||||||||||||    
T  9250 tgtctttcaaaaagataagaatttatattatat 9218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 415 - 443
Target Start/End: Original strand, 5869 - 5897
Alignment:
Q  415 attcaaaaagataagaatttatattatat 443  Q
    |||||||||||||||||||||||||||||    
T  5869 attcaaaaagataagaatttatattatat 5897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 410 - 458
Target Start/End: Original strand, 350902 - 350950
Alignment:
Q  410 ttgtcattcaaaaagataagaatttatattatatttgttatattcttgg 458  Q
    ||||||||||||||  |||||||||||||| |||||| |||||| ||||    
T  350902 ttgtcattcaaaaaagtaagaatttatattgtatttgctatattgttgg 350950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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