View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16909_low_8 (Length: 237)

Name: NF16909_low_8
Description: NF16909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16909_low_8
NF16909_low_8
[»] chr3 (87 HSPs)
chr3 (75-237)||(45220836-45221000)
chr3 (105-237)||(5841207-5841339)
chr3 (75-237)||(2249090-2249254)
chr3 (102-237)||(41175-41310)
chr3 (102-237)||(16325944-16326079)
chr3 (1-122)||(16839840-16839961)
chr3 (75-237)||(16840079-16840241)
chr3 (3-129)||(14647887-14648013)
chr3 (1-133)||(13436098-13436231)
chr3 (3-129)||(41519-41646)
chr3 (3-129)||(2248885-2249012)
chr3 (3-129)||(16325474-16325601)
chr3 (1-133)||(8928600-8928733)
chr3 (1-126)||(13520706-13520832)
chr3 (124-237)||(11912468-11912581)
chr3 (76-163)||(14648191-14648280)
chr3 (1-126)||(13523336-13523462)
chr3 (75-207)||(13435924-13436056)
chr3 (75-130)||(41352-41407)
chr3 (75-130)||(5841552-5841607)
chr3 (75-130)||(16325713-16325768)
chr3 (75-130)||(16325780-16325835)
chr3 (75-130)||(16325847-16325902)
chr3 (18-127)||(52466497-52466607)
chr3 (18-133)||(5841681-5841796)
chr3 (67-207)||(8928699-8928840)
chr3 (18-133)||(24178803-24178918)
chr3 (18-133)||(35961812-35961927)
chr3 (75-132)||(16839978-16840035)
chr3 (18-133)||(17691999-17692115)
chr3 (1-133)||(34852827-34852963)
chr3 (75-130)||(5841383-5841438)
chr3 (75-129)||(2248991-2249045)
chr3 (18-127)||(45220448-45220558)
chr3 (18-133)||(52990003-52990118)
chr3 (75-127)||(14648090-14648142)
chr3 (75-130)||(41419-41474)
chr3 (75-130)||(2249024-2249078)
chr3 (67-129)||(14648048-14648111)
chr3 (75-130)||(14648123-14648178)
chr3 (18-127)||(54876681-54876791)
chr3 (75-129)||(14647992-14648045)
chr3 (75-128)||(41487-41540)
chr3 (75-128)||(5841620-5841673)
chr3 (75-128)||(16325613-16325666)
chr3 (18-133)||(24513664-24513780)
chr3 (174-237)||(10834915-10834979)
chr3 (75-127)||(14648024-14648076)
chr3 (18-124)||(21837147-21837254)
chr3 (75-129)||(16839947-16839999)
chr3 (18-127)||(22651873-22651983)
chr3 (75-129)||(16325580-16325634)
chr3 (75-133)||(24180410-24180467)
chr3 (18-133)||(17685810-17685926)
chr3 (20-133)||(3265173-3265286)
chr3 (75-133)||(2249056-2249115)
chr3 (75-133)||(11914486-11914542)
chr3 (18-126)||(14965900-14966008)
chr3 (75-133)||(24513537-24513593)
chr3 (75-129)||(41453-41507)
chr3 (75-129)||(5841417-5841471)
chr3 (75-132)||(11912662-11912719)
chr3 (75-129)||(16325680-16325734)
chr3 (75-132)||(35962193-35962248)
chr3 (75-133)||(45220539-45220597)
chr3 (75-133)||(45220736-45220794)
chr3 (1-58)||(11912759-11912816)
chr3 (75-127)||(16840045-16840098)
chr3 (75-127)||(5841452-5841504)
chr3 (75-133)||(24178926-24178983)
chr3 (75-133)||(13436031-13436090)
chr3 (75-133)||(45220802-45220861)
chr3 (75-129)||(5841586-5841640)
chr3 (75-128)||(11912597-11912650)
chr3 (75-129)||(11912698-11912755)
chr3 (199-237)||(12853363-12853401)
chr3 (75-132)||(13436066-13436123)
chr3 (199-237)||(14670067-14670105)
chr3 (75-128)||(16325646-16325700)
chr3 (199-237)||(16795544-16795582)
chr3 (75-132)||(16840011-16840069)
chr3 (75-132)||(35962031-35962086)
chr3 (18-94)||(11914297-11914374)
chr3 (89-129)||(11914469-11914507)
chr3 (75-127)||(35962127-35962179)
chr3 (75-133)||(14965828-14965885)
chr3 (75-133)||(35962062-35962119)
[»] chr5 (36 HSPs)
chr5 (75-237)||(19075930-19076094)
chr5 (75-237)||(31253084-31253248)
chr5 (102-237)||(33473834-33473969)
chr5 (3-129)||(33473497-33473624)
chr5 (104-235)||(36459591-36459722)
chr5 (3-129)||(43243442-43243568)
chr5 (1-133)||(36459934-36460065)
chr5 (1-133)||(10816217-10816352)
chr5 (1-133)||(23538246-23538378)
chr5 (18-126)||(19076241-19076349)
chr5 (75-130)||(33473603-33473658)
chr5 (75-130)||(33473670-33473725)
chr5 (75-130)||(33473737-33473792)
chr5 (18-126)||(17010744-17010853)
chr5 (76-163)||(43243680-43243769)
chr5 (67-130)||(43243603-43243667)
chr5 (75-129)||(43243547-43243600)
chr5 (75-127)||(43243579-43243631)
chr5 (18-124)||(262881-262987)
chr5 (18-133)||(29447728-29447843)
chr5 (75-133)||(31252984-31253042)
chr5 (75-132)||(36459796-36459853)
chr5 (75-133)||(31253050-31253109)
chr5 (75-133)||(19076069-19076128)
chr5 (75-133)||(36459725-36459783)
chr5 (199-237)||(15238117-15238155)
chr5 (199-237)||(22108449-22108487)
chr5 (18-126)||(41861618-41861727)
chr5 (76-133)||(41861841-41861896)
chr5 (46-133)||(6765599-6765687)
chr5 (76-133)||(19076136-19076193)
chr5 (75-127)||(24212139-24212191)
chr5 (75-131)||(33473770-33473827)
chr5 (75-130)||(19076106-19076161)
chr5 (75-130)||(31253017-31253072)
chr5 (75-129)||(36459762-36459820)
[»] chr1 (49 HSPs)
chr1 (75-237)||(11945035-11945199)
chr1 (75-237)||(43630866-43631030)
chr1 (76-237)||(11809824-11809987)
chr1 (75-232)||(636445-636596)
chr1 (3-129)||(20031825-20031951)
chr1 (1-133)||(11945339-11945472)
chr1 (75-163)||(20032095-20032185)
chr1 (3-133)||(29534363-29534496)
chr1 (18-133)||(23072886-23073002)
chr1 (18-132)||(43630415-43630530)
chr1 (75-130)||(636412-636467)
chr1 (75-130)||(20032028-20032083)
chr1 (18-126)||(25263124-25263232)
chr1 (18-127)||(46198623-46198733)
chr1 (18-133)||(11809532-11809648)
chr1 (75-130)||(11809721-11809776)
chr1 (18-127)||(27653513-27653623)
chr1 (18-127)||(29764562-29764672)
chr1 (75-129)||(11809689-11809742)
chr1 (75-129)||(20031930-20031983)
chr1 (22-133)||(636160-636272)
chr1 (75-128)||(636346-636399)
chr1 (75-127)||(20031962-20032014)
chr1 (75-129)||(636313-636367)
chr1 (75-133)||(11945241-11945299)
chr1 (75-133)||(43630767-43630825)
chr1 (67-133)||(11809745-11809813)
chr1 (75-133)||(11945174-11945233)
chr1 (67-129)||(20031986-20032049)
chr1 (75-133)||(20032061-20032120)
chr1 (75-133)||(22147777-22147833)
chr1 (75-129)||(636379-636433)
chr1 (75-129)||(11809656-11809710)
chr1 (174-231)||(29533934-29533992)
chr1 (19-133)||(10492081-10492195)
chr1 (75-133)||(10492267-10492324)
chr1 (75-133)||(21740065-21740122)
chr1 (75-133)||(25263312-25263369)
chr1 (75-133)||(23072721-23072779)
chr1 (199-237)||(22132098-22132136)
chr1 (75-125)||(43630569-43630619)
chr1 (75-132)||(43630669-43630726)
chr1 (75-127)||(43630702-43630753)
chr1 (75-127)||(636280-636332)
chr1 (75-127)||(13513635-13513687)
chr1 (75-127)||(43630506-43630556)
chr1 (75-133)||(10492202-10492259)
chr1 (75-130)||(11945211-11945266)
chr1 (75-133)||(20316017-20316074)
[»] scaffold0815 (6 HSPs)
scaffold0815 (75-237)||(51-215)
scaffold0815 (18-127)||(329-439)
scaffold0815 (75-127)||(296-348)
scaffold0815 (75-133)||(190-249)
scaffold0815 (75-133)||(257-315)
scaffold0815 (75-130)||(227-282)
[»] scaffold0679 (7 HSPs)
scaffold0679 (105-237)||(3171-3303)
scaffold0679 (75-130)||(2903-2958)
scaffold0679 (18-133)||(2714-2829)
scaffold0679 (75-130)||(3072-3127)
scaffold0679 (75-128)||(2837-2890)
scaffold0679 (75-129)||(3039-3093)
scaffold0679 (75-127)||(3006-3058)
[»] chr7 (85 HSPs)
chr7 (105-237)||(11394784-11394916)
chr7 (75-237)||(16185565-16185729)
chr7 (102-237)||(41283686-41283821)
chr7 (2-132)||(34957159-34957289)
chr7 (1-129)||(13892416-13892544)
chr7 (1-126)||(29003815-29003940)
chr7 (104-237)||(15213089-15213222)
chr7 (1-127)||(15213468-15213594)
chr7 (3-140)||(833533-833673)
chr7 (3-140)||(1198713-1198853)
chr7 (3-133)||(837529-837659)
chr7 (3-133)||(1202709-1202839)
chr7 (1-126)||(14416427-14416552)
chr7 (19-129)||(41284029-41284140)
chr7 (75-130)||(11394516-11394571)
chr7 (75-130)||(41283863-41283918)
chr7 (76-132)||(16251519-16251575)
chr7 (18-132)||(46580956-46581071)
chr7 (21-133)||(11394330-11394442)
chr7 (75-130)||(16185741-16185796)
chr7 (75-132)||(16251715-16251772)
chr7 (75-132)||(16251781-16251838)
chr7 (75-127)||(41283998-41284050)
chr7 (75-130)||(11394685-11394740)
chr7 (20-133)||(14157262-14157376)
chr7 (18-127)||(15719715-15719825)
chr7 (18-133)||(11092571-11092686)
chr7 (18-133)||(14981716-14981831)
chr7 (75-132)||(13892380-13892437)
chr7 (18-133)||(14273228-14273344)
chr7 (75-132)||(16251616-16251673)
chr7 (75-128)||(41283931-41283984)
chr7 (18-127)||(16185810-16185919)
chr7 (75-133)||(15213397-15213455)
chr7 (82-129)||(16251590-16251637)
chr7 (75-132)||(15213328-15213385)
chr7 (75-129)||(16185775-16185829)
chr7 (75-129)||(16251682-16251736)
chr7 (75-129)||(41283963-41284017)
chr7 (75-128)||(11394450-11394503)
chr7 (67-133)||(16251805-16251873)
chr7 (75-132)||(34957122-34957183)
chr7 (25-133)||(1490352-1490462)
chr7 (75-129)||(16251748-16251802)
chr7 (75-133)||(34957088-34957146)
chr7 (28-133)||(37793713-37793819)
chr7 (22-133)||(11084829-11084940)
chr7 (75-129)||(11394652-11394706)
chr7 (18-127)||(16550928-16551038)
chr7 (18-127)||(16614624-16614734)
chr7 (75-129)||(41283897-41283951)
chr7 (76-207)||(13892119-13892248)
chr7 (18-94)||(16998345-16998422)
chr7 (75-133)||(10501677-10501734)
chr7 (75-127)||(11394619-11394671)
chr7 (75-126)||(29003749-29003800)
chr7 (75-133)||(8939924-8939980)
chr7 (75-133)||(8939988-8940044)
chr7 (75-133)||(10501806-10501864)
chr7 (75-133)||(15116231-15116289)
chr7 (75-129)||(15213262-15213316)
chr7 (75-133)||(16185704-16185763)
chr7 (75-129)||(16251649-16251703)
chr7 (75-133)||(34957055-34957113)
chr7 (75-132)||(1490437-1490495)
chr7 (199-237)||(7520215-7520253)
chr7 (199-237)||(10607320-10607358)
chr7 (75-132)||(11092539-11092596)
chr7 (199-237)||(11660323-11660361)
chr7 (199-237)||(13891671-13891709)
chr7 (199-237)||(13892054-13892092)
chr7 (75-132)||(13892347-13892404)
chr7 (75-129)||(15213295-15213352)
chr7 (75-133)||(16551052-16551110)
chr7 (75-133)||(16614552-16614610)
chr7 (199-237)||(20486783-20486821)
chr7 (102-132)||(29003776-29003806)
chr7 (199-237)||(39268313-39268351)
chr7 (199-236)||(9752507-9752544)
chr7 (18-59)||(32161124-32161165)
chr7 (75-131)||(41283828-41283885)
chr7 (75-133)||(10501612-10501669)
chr7 (103-163)||(16251909-16251969)
chr7 (75-133)||(16323767-16323824)
chr7 (199-235)||(25928371-25928407)
[»] chr6 (63 HSPs)
chr6 (105-237)||(28707900-28708032)
chr6 (102-237)||(23955410-23955545)
chr6 (75-237)||(9622787-9622950)
chr6 (3-129)||(7429665-7429791)
chr6 (1-132)||(34297226-34297357)
chr6 (3-127)||(23955856-23955981)
chr6 (3-127)||(9622582-9622706)
chr6 (3-127)||(14594409-14594533)
chr6 (104-236)||(34297677-34297809)
chr6 (104-237)||(25737933-25738066)
chr6 (13-125)||(25738205-25738318)
chr6 (13-126)||(29417087-29417200)
chr6 (75-130)||(23955587-23955642)
chr6 (75-130)||(23955654-23955709)
chr6 (75-130)||(28708245-28708300)
chr6 (76-160)||(7429499-7429585)
chr6 (18-133)||(28708374-28708489)
chr6 (76-163)||(14594582-14594671)
chr6 (15-133)||(16885503-16885621)
chr6 (21-133)||(18927623-18927735)
chr6 (75-130)||(28708076-28708131)
chr6 (18-129)||(17378078-17378190)
chr6 (75-127)||(7429634-7429686)
chr6 (13-133)||(15817890-15818009)
chr6 (75-130)||(7429598-7429653)
chr6 (75-130)||(14594514-14594569)
chr6 (18-126)||(15174379-15174488)
chr6 (75-129)||(23955788-23955842)
chr6 (75-128)||(23955756-23955809)
chr6 (75-130)||(9622720-9622775)
chr6 (75-133)||(17378169-17378225)
chr6 (75-133)||(18913508-18913564)
chr6 (22-126)||(28104184-28104288)
chr6 (75-129)||(23955821-23955875)
chr6 (75-132)||(34297371-34297428)
chr6 (67-127)||(9622678-9622739)
chr6 (18-127)||(15875115-15875223)
chr6 (75-128)||(28708313-28708366)
chr6 (76-132)||(34297477-34297533)
chr6 (75-133)||(18913572-18913628)
chr6 (75-132)||(20182494-20182553)
chr6 (75-132)||(22153438-22153497)
chr6 (75-130)||(23955721-23955776)
chr6 (75-133)||(18913636-18913693)
chr6 (75-129)||(28708110-28708164)
chr6 (18-129)||(18913672-18913784)
chr6 (75-133)||(20182566-20182626)
chr6 (75-133)||(22153365-22153425)
chr6 (75-127)||(28708145-28708197)
chr6 (75-133)||(9622753-9622812)
chr6 (75-133)||(20182460-20182518)
chr6 (75-133)||(22153473-22153531)
chr6 (75-133)||(34297616-34297674)
chr6 (18-126)||(18936933-18937042)
chr6 (75-132)||(19953347-19953404)
chr6 (76-133)||(22420808-22420865)
chr6 (199-237)||(23400719-23400757)
chr6 (76-132)||(18927493-18927549)
chr6 (75-131)||(23955552-23955609)
chr6 (104-133)||(25738168-25738197)
chr6 (75-132)||(34297547-34297602)
chr6 (75-126)||(22420782-22420833)
chr6 (75-129)||(34297404-34297462)
[»] chr4 (55 HSPs)
chr4 (75-237)||(37839065-37839229)
chr4 (75-237)||(42597794-42597958)
chr4 (102-237)||(28384892-28385027)
chr4 (3-129)||(28385235-28385362)
chr4 (1-133)||(4831706-4831838)
chr4 (1-133)||(4835001-4835133)
chr4 (18-126)||(37838876-37838984)
chr4 (18-126)||(42597605-42597713)
chr4 (15-133)||(30146216-30146337)
chr4 (21-133)||(9923096-9923208)
chr4 (75-130)||(28385069-28385124)
chr4 (75-130)||(37838999-37839053)
chr4 (75-130)||(42597728-42597782)
chr4 (75-133)||(15497473-15497530)
chr4 (75-129)||(28385202-28385256)
chr4 (21-127)||(11479651-11479757)
chr4 (75-133)||(14747020-14747076)
chr4 (75-133)||(15481673-15481729)
chr4 (18-126)||(26013213-26013321)
chr4 (18-127)||(40619555-40619665)
chr4 (75-129)||(54605041-54605093)
chr4 (75-128)||(28385137-28385190)
chr4 (75-133)||(14747148-14747204)
chr4 (75-133)||(37839031-37839090)
chr4 (75-133)||(42597760-42597819)
chr4 (75-133)||(54605101-54605157)
chr4 (75-133)||(15480886-15480943)
chr4 (75-132)||(15884430-15884485)
chr4 (75-129)||(28385169-28385223)
chr4 (18-133)||(14746864-14746980)
chr4 (69-126)||(15497532-15497588)
chr4 (75-124)||(15884624-15884672)
chr4 (75-133)||(14747084-14747140)
chr4 (75-133)||(15497603-15497659)
chr4 (75-133)||(21102755-21102811)
chr4 (75-126)||(28385106-28385157)
chr4 (199-237)||(631747-631785)
chr4 (75-133)||(4831813-4831874)
chr4 (75-133)||(4835108-4835169)
chr4 (75-132)||(9923031-9923088)
chr4 (199-237)||(12422984-12423022)
chr4 (199-237)||(13813832-13813870)
chr4 (199-237)||(13818320-13818358)
chr4 (75-133)||(15008007-15008065)
chr4 (18-126)||(15884339-15884448)
chr4 (199-237)||(17052445-17052483)
chr4 (199-237)||(22634926-22634964)
chr4 (199-237)||(23996966-23997004)
chr4 (199-237)||(24048384-24048422)
chr4 (75-129)||(37838966-37839020)
chr4 (75-129)||(42597695-42597749)
chr4 (19-87)||(15497318-15497387)
chr4 (150-207)||(49548998-49549055)
chr4 (75-133)||(14746955-14747012)
chr4 (69-133)||(15480945-15481008)
[»] chr8 (82 HSPs)
chr8 (75-237)||(44494097-44494261)
chr8 (75-237)||(21967866-21968030)
chr8 (75-237)||(21980706-21980870)
chr8 (75-237)||(21985689-21985853)
chr8 (75-237)||(22009070-22009234)
chr8 (105-237)||(34950127-34950259)
chr8 (102-237)||(8414879-8415014)
chr8 (102-237)||(11774337-11774472)
chr8 (75-237)||(21328607-21328769)
chr8 (75-237)||(22000657-22000816)
chr8 (75-237)||(11251961-11252120)
chr8 (1-129)||(21980463-21980593)
chr8 (1-129)||(22005460-22005590)
chr8 (1-132)||(16197694-16197826)
chr8 (1-129)||(21985446-21985576)
chr8 (1-129)||(22000482-22000611)
chr8 (1-129)||(21328849-21328978)
chr8 (3-129)||(11251823-11251950)
chr8 (1-132)||(42560484-42560615)
chr8 (3-129)||(44493858-44493985)
chr8 (3-127)||(34950370-34950495)
chr8 (3-128)||(8414643-8414769)
chr8 (104-233)||(42560786-42560915)
chr8 (3-129)||(11774714-11774841)
chr8 (14-126)||(22352673-22352785)
chr8 (75-130)||(8414782-8414837)
chr8 (75-130)||(11774514-11774569)
chr8 (75-130)||(11774581-11774636)
chr8 (75-132)||(21328813-21328870)
chr8 (75-130)||(21980572-21980627)
chr8 (26-133)||(18024679-18024786)
chr8 (18-124)||(14103283-14103390)
chr8 (75-127)||(44493964-44494016)
chr8 (75-130)||(21967799-21967854)
chr8 (75-130)||(21980639-21980694)
chr8 (75-130)||(21985622-21985677)
chr8 (75-130)||(22000590-22000645)
chr8 (75-130)||(22009003-22009058)
chr8 (18-126)||(23409527-23409635)
chr8 (75-130)||(44494030-44494085)
chr8 (75-132)||(21328745-21328803)
chr8 (75-125)||(22005569-22005619)
chr8 (75-128)||(11774649-11774702)
chr8 (75-130)||(21985555-21985610)
chr8 (75-130)||(34950269-34950324)
chr8 (75-129)||(11774681-11774735)
chr8 (75-132)||(21328779-21328837)
chr8 (75-129)||(44493997-44494051)
chr8 (75-129)||(16197664-16197718)
chr8 (75-133)||(19879486-19879542)
chr8 (75-133)||(19879614-19879672)
chr8 (75-133)||(21967832-21967891)
chr8 (75-129)||(21980605-21980660)
chr8 (75-133)||(21980672-21980731)
chr8 (75-129)||(21985588-21985643)
chr8 (75-133)||(21985655-21985714)
chr8 (75-133)||(22000623-22000682)
chr8 (75-133)||(22009036-22009095)
chr8 (75-129)||(8414749-8414803)
chr8 (75-129)||(11774615-11774669)
chr8 (75-132)||(12576810-12576867)
chr8 (75-129)||(34950303-34950357)
chr8 (75-127)||(19879556-19879606)
chr8 (18-127)||(23478100-23478208)
chr8 (75-127)||(11251929-11251980)
chr8 (75-133)||(19879713-19879770)
chr8 (3-39)||(21967740-21967776)
chr8 (75-127)||(34950338-34950389)
chr8 (41-126)||(17461345-17461431)
chr8 (75-133)||(42560591-42560649)
chr8 (18-126)||(19879847-19879956)
chr8 (75-128)||(42560656-42560709)
chr8 (199-237)||(44385833-44385871)
chr8 (75-131)||(8414815-8414872)
chr8 (75-131)||(11774479-11774536)
chr8 (75-127)||(22352509-22352561)
chr8 (104-132)||(21980534-21980562)
chr8 (104-132)||(21985517-21985545)
chr8 (104-132)||(22000552-22000580)
chr8 (104-132)||(22005531-22005559)
chr8 (75-133)||(22352536-22352593)
chr8 (199-235)||(23427869-23427905)
[»] chr2 (34 HSPs)
chr2 (75-237)||(37379077-37379241)
chr2 (1-133)||(22702916-22703048)
chr2 (18-126)||(37379322-37379430)
chr2 (18-133)||(13101802-13101917)
chr2 (18-132)||(24316375-24316490)
chr2 (18-126)||(24681148-24681256)
chr2 (13-133)||(18359108-18359229)
chr2 (17-126)||(21082016-21082126)
chr2 (18-126)||(34874493-34874601)
chr2 (75-130)||(37379253-37379307)
chr2 (18-126)||(34492416-34492525)
chr2 (18-132)||(27472145-27472259)
chr2 (75-133)||(23707758-23707814)
chr2 (75-133)||(24670624-24670680)
chr2 (75-133)||(24670688-24670744)
chr2 (18-127)||(24917840-24917950)
chr2 (75-133)||(34492635-34492691)
chr2 (18-126)||(23707569-23707678)
chr2 (18-94)||(21914673-21914750)
chr2 (19-125)||(22459844-22459950)
chr2 (75-140)||(22702873-22702941)
chr2 (18-94)||(24670758-24670835)
chr2 (75-133)||(23707822-23707878)
chr2 (75-133)||(24681011-24681067)
chr2 (75-133)||(34492571-34492627)
chr2 (75-133)||(37379216-37379275)
chr2 (75-133)||(24670560-24670616)
chr2 (75-133)||(24917609-24917665)
chr2 (18-124)||(27485413-27485520)
chr2 (75-133)||(34492507-34492563)
chr2 (75-132)||(34874616-34874673)
chr2 (75-129)||(37379286-37379340)
chr2 (75-133)||(23707693-23707750)
chr2 (75-126)||(24917745-24917794)
[»] scaffold0016 (7 HSPs)
scaffold0016 (107-237)||(173133-173263)
scaffold0016 (1-129)||(172794-172924)
scaffold0016 (75-130)||(172903-172958)
scaffold0016 (75-130)||(173003-173058)
scaffold0016 (75-129)||(172970-173024)
scaffold0016 (75-133)||(173036-173095)
scaffold0016 (104-132)||(172865-172893)
[»] scaffold0001 (28 HSPs)
scaffold0001 (1-129)||(163269-163396)
scaffold0001 (102-219)||(175425-175542)
scaffold0001 (3-127)||(175786-175911)
scaffold0001 (3-129)||(168430-168557)
scaffold0001 (1-132)||(153144-153278)
scaffold0001 (69-194)||(163469-163594)
scaffold0001 (75-130)||(175584-175639)
scaffold0001 (75-132)||(153321-153378)
scaffold0001 (75-129)||(163375-163429)
scaffold0001 (75-132)||(153387-153444)
scaffold0001 (75-132)||(153553-153610)
scaffold0001 (75-207)||(153653-153785)
scaffold0001 (75-129)||(175718-175772)
scaffold0001 (75-132)||(153487-153544)
scaffold0001 (75-132)||(163408-163465)
scaffold0001 (75-128)||(175686-175739)
scaffold0001 (75-129)||(175751-175805)
scaffold0001 (75-129)||(153288-153342)
scaffold0001 (75-129)||(153354-153408)
scaffold0001 (75-130)||(175651-175706)
scaffold0001 (83-132)||(153262-153312)
scaffold0001 (75-132)||(153420-153478)
scaffold0001 (75-132)||(163441-163499)
scaffold0001 (75-129)||(153454-153508)
scaffold0001 (75-129)||(153520-153574)
scaffold0001 (79-133)||(153590-153645)
scaffold0001 (75-133)||(153620-153678)
scaffold0001 (75-131)||(175549-175606)
[»] scaffold0301 (1 HSPs)
scaffold0301 (3-129)||(14326-14453)
[»] scaffold0080 (6 HSPs)
scaffold0080 (1-133)||(28718-28850)
scaffold0080 (1-133)||(34183-34315)
scaffold0080 (75-205)||(28580-28710)
scaffold0080 (75-205)||(34045-34175)
scaffold0080 (199-237)||(28513-28551)
scaffold0080 (199-237)||(33978-34016)
[»] scaffold0066 (2 HSPs)
scaffold0066 (1-133)||(48145-48277)
scaffold0066 (75-133)||(48109-48170)
[»] scaffold0015 (4 HSPs)
scaffold0015 (75-165)||(208655-208747)
scaffold0015 (75-130)||(208759-208814)
scaffold0015 (75-133)||(208722-208781)
scaffold0015 (3-39)||(208837-208873)
[»] scaffold0599 (7 HSPs)
scaffold0599 (124-237)||(4162-4275)
scaffold0599 (75-133)||(6203-6259)
scaffold0599 (75-132)||(4356-4413)
scaffold0599 (1-58)||(35-92)
scaffold0599 (1-58)||(4453-4510)
scaffold0599 (75-128)||(4291-4344)
scaffold0599 (75-129)||(4392-4449)
[»] scaffold0098 (5 HSPs)
scaffold0098 (76-163)||(34123-34212)
scaffold0098 (75-130)||(34225-34280)
scaffold0098 (3-72)||(34962-35032)
scaffold0098 (3-55)||(24109-24162)
scaffold0098 (89-129)||(34259-34299)
[»] scaffold0021 (2 HSPs)
scaffold0021 (13-133)||(146003-146123)
scaffold0021 (75-133)||(145967-146028)
[»] scaffold2015 (2 HSPs)
scaffold2015 (76-163)||(360-449)
scaffold2015 (76-130)||(293-347)
[»] scaffold0022 (3 HSPs)
scaffold0022 (18-133)||(54119-54235)
scaffold0022 (75-133)||(54275-54331)
scaffold0022 (75-133)||(54210-54267)
[»] scaffold0434 (1 HSPs)
scaffold0434 (18-133)||(7222-7337)
[»] scaffold0019 (3 HSPs)
scaffold0019 (18-133)||(21675-21791)
scaffold0019 (75-133)||(21579-21635)
scaffold0019 (75-127)||(21521-21571)
[»] scaffold0877 (2 HSPs)
scaffold0877 (18-132)||(3004-3119)
scaffold0877 (76-127)||(3162-3213)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-133)||(70745-70861)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-86)||(17918-18004)
[»] scaffold0577 (4 HSPs)
scaffold0577 (18-133)||(7658-7772)
scaffold0577 (75-133)||(7498-7554)
scaffold0577 (75-133)||(7562-7618)
scaffold0577 (75-133)||(7626-7683)
[»] scaffold0076 (1 HSPs)
scaffold0076 (19-133)||(24877-24990)
[»] scaffold0802 (1 HSPs)
scaffold0802 (21-126)||(5697-5802)
[»] scaffold0356 (1 HSPs)
scaffold0356 (18-124)||(720-827)
[»] scaffold0032 (1 HSPs)
scaffold0032 (18-126)||(66993-67101)
[»] scaffold0020 (2 HSPs)
scaffold0020 (18-126)||(170030-170138)
scaffold0020 (75-132)||(170218-170275)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-133)||(126751-126865)
[»] scaffold0436 (3 HSPs)
scaffold0436 (18-126)||(7887-7996)
scaffold0436 (75-126)||(7792-7841)
scaffold0436 (75-127)||(7855-7905)
[»] scaffold0025 (1 HSPs)
scaffold0025 (18-133)||(78128-78243)
[»] scaffold1783 (1 HSPs)
scaffold1783 (13-126)||(97-209)
[»] scaffold0317 (1 HSPs)
scaffold0317 (18-129)||(7183-7295)
[»] scaffold0515 (1 HSPs)
scaffold0515 (22-133)||(4043-4155)
[»] scaffold0306 (1 HSPs)
scaffold0306 (22-133)||(4043-4155)
[»] scaffold0037 (2 HSPs)
scaffold0037 (76-133)||(69056-69113)
scaffold0037 (75-126)||(68997-69048)
[»] scaffold0247 (1 HSPs)
scaffold0247 (18-62)||(12-56)
[»] scaffold0780 (1 HSPs)
scaffold0780 (75-133)||(3698-3756)
[»] scaffold0335 (1 HSPs)
scaffold0335 (20-126)||(610-717)
[»] scaffold0575 (1 HSPs)
scaffold0575 (199-237)||(6960-6998)
[»] scaffold0293 (1 HSPs)
scaffold0293 (199-237)||(21339-21377)
[»] scaffold0153 (1 HSPs)
scaffold0153 (75-132)||(10330-10387)
[»] scaffold0125 (1 HSPs)
scaffold0125 (17-127)||(2164-2271)
[»] scaffold0031 (1 HSPs)
scaffold0031 (199-237)||(37202-37240)
[»] scaffold0013 (1 HSPs)
scaffold0013 (199-237)||(74331-74369)
[»] scaffold0124 (1 HSPs)
scaffold0124 (201-237)||(25569-25605)
[»] scaffold0017 (2 HSPs)
scaffold0017 (75-126)||(1609-1660)
scaffold0017 (75-126)||(8360-8411)


Alignment Details
Target: chr3 (Bit Score: 141; Significance: 5e-74; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 45220836 - 45221000
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45220836 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 45220935  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45220936 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 45221000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 5841339 - 5841207
Alignment:
Q  105 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 204  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5841339 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 5841240  T
Q  205 tgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||    
T  5841239 tgaggttacctatgagttgttaaatgtacttga 5841207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 2249090 - 2249254
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| ||| ||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||    
T  2249090 aagaggtggtgtactcttactttgttgttgtctatgagaggtggtgtactcttacgtggtctatgttgatgagtatgacgaggttatgatgatcttctat 2249189  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  2249190 agtgttgaatgtgaggttgttatgatattacatgatgttacctatgagttattaaatgtacttga 2249254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 41310 - 41175
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||||||||    
T  41310 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatatt 41211  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  41210 acatgaggttacctatgagttgttaaatgtacttga 41175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 16325944 - 16326079
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||  |||||||||||||||||    
T  16325944 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaagttatgatgatcttttatgatgttgaatatgaggttgttatgatatt 16326043  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  16326044 acatgaggttacctatgagttgttaaatgtacttga 16326079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16839840 - 16839961
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcg 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||  ||||||||||||| ||||||||||||    
T  16839840 tcatcatcgttggtgttgttgttgaagtcgtagttgtagctgttgttggtgatagtttatgtcaggtgttttataagaggtggtgtactcttacttgtcg 16839939  T
Q  101 ttgttataagaggtggtgtact 122  Q
    || |||||||||||||||||||    
T  16839940 tttttataagaggtggtgtact 16839961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 16840079 - 16840241
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    ||||||||||||| |||||| |||  ||| |||||||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||  | ||||    
T  16840079 aagaggtggtgtactcttaccttgatgtt-ttataagaggtggtgtactcttacgttgtttatgttgatgattatgatgatgttatgatgattgtttata 16840177  T
Q  174 gtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||| ||||    
T  16840178 gtgttgaatgtgaggttgttatgatgttacatgattttatctatgagttgttaaatgtatttga 16840241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 14647887 - 14648013
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgtt 102  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||| |||||||||  ||||||||||||| |||||| ||||||     
T  14647887 atcatcgttggtgttgttgttgaagtagtagttgtatccgttgttggtgattgatcatgttagatgttttataagaggtggtgtactcttacgtgtcgtc 14647986  T
Q  103 gttataagaggtggtgtactcttactt 129  Q
     ||||||||||||||||||||||||||    
T  14647987 tttataagaggtggtgtactcttactt 14648013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 13436231 - 13436098
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    |||||||| ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||  ||||||||||||| |||||| || ||    
T  13436231 tcatcatcattggtgtcgttgttgaagtcgtagttgtagccgttgttggtgattgtttatgtcaggtgttttataagaggtggtgtactcttactttttc 13436132  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    ||| |||||||||||||||||||||||| |||||    
T  13436131 gtttttataagaggtggtgtactcttacgttgtt 13436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 41646 - 41519
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| | | || ||||||||||| ||||||||||||| |||||| ||||||    
T  41646 atcatcgttggtgttgttgttaaagtcgtagttgtatccgttgttggtgattgatcaggttagatgtttttataagaggtggtgtactcttacgtgtcgt 41547  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      ||||||||||||||||||||||||||    
T  41546 ctttataagaggtggtgtactcttactt 41519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 2248885 - 2249012
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |||||||| || ||||||||||||| |||||| ||||||    
T  2248885 atcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgatcaggttagatgtttctataagaggtggtgtactcttacgtgtcgt 2248984  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      ||||||||||||||||||||||||||    
T  2248985 ctttataagaggtggtgtactcttactt 2249012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 16325474 - 16325601
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |||||||| || ||||||||||||| |||||| ||| ||    
T  16325474 atcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgatcaggttagatgtttctataagaggtggtgtactcttacgtgttgt 16325573  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      ||||||||||||| ||||||||||||    
T  16325574 ctttataagaggtggagtactcttactt 16325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 8928600 - 8928733
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||  |||||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| ||||     
T  8928600 tcatcatcgtccgtgttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgtt 8928699  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    ||| |||||||||||||||||||||||| |||||    
T  8928700 gtttttataagaggtggtgtactcttacgttgtt 8928733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13520706 - 13520832
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgt 98  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||  ||||||||||||| |||||| ||||    
T  13520706 tcatcatcgtccgtgttgttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttacattgt 13520805  T
Q  99 cgttgttataagaggtggtgtactctta 126  Q
     ||| |||||||||||||||||||||||    
T  13520806 tgtt-ttataagaggtggtgtactctta 13520832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 11912581 - 11912468
Alignment:
Q  124 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttg 223  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | |||||||||||||| |||| | || |||| |||||||| |||| ||||||||||    
T  11912581 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 11912482  T
Q  224 ttaaatgtacttga 237  Q
    ||||||||||||||    
T  11912481 ttaaatgtacttga 11912468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 14648191 - 14648280
Alignment:
Q  76 agaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 163  Q
    |||||||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14648191 agaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 14648280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13523336 - 13523462
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgt 98  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||| | |||||| |||| ||||||  ||||| ||||||| |||||| ||||    
T  13523336 tcatcatcgtccgtgttgttgttgaagtcgtagttgaagctgttgttggtgactatttatgttcaggtgttttgtaagagatggtgtattcttacgttgt 13523435  T
Q  99 cgttgttataagaggtggtgtactctta 126  Q
     ||| |||||||||||||||||||||||    
T  13523436 tgtt-ttataagaggtggtgtactctta 13523462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 207
Target Start/End: Complemental strand, 13436056 - 13435924
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    ||||||||||||| |||||| |||| || |||||||||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||   | |||     
T  13436056 aagaggtggtgtactcttacgttgttgt-gttataagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatgactgtttatg 13435958  T
Q  174 gtgttgaatgcgaggttgttatgatattacatga 207  Q
    |||||||||  |||||||||||||| || |||||    
T  13435957 gtgttgaatatgaggttgttatgatgtttcatga 13435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 41407 - 41352
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41407 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 41352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 5841607 - 5841552
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5841607 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 5841552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 16325713 - 16325768
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16325713 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 16325768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 16325780 - 16325835
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16325780 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 16325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 16325847 - 16325902
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16325847 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 16325902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 52466497 - 52466607
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| |||| ||||||  ||||||||||||| |||||| ||||  || || |||||||||    
T  52466497 gttgttgaagtcgtagttgaatctgttattggtgattgtttatgttcaggtgttttgtaagaggtggtgtactcttacgttgttattctt-taagaggtg 52466595  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  52466596 gtgtactcttac 52466607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 5841796 - 5841681
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||||||  ||||||||||||    
T  5841796 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcgt--ttataagaggtg 5841699  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  5841698 gtgtactcttacgttgtt 5841681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 8928699 - 8928840
Alignment:
Q  67 tgttttta-aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatga 164  Q
    |||||||| ||||||||||||| |||||| |||| |  ||||| |||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||    
T  8928699 tgtttttataagaggtggtgtactcttacgttgttga-gttatgagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatga 8928797  T
Q  165 tcttctatagtgttgaatgcgaggttgttatgatattacatga 207  Q
      || ||| | |||||||  |||||||||||||| ||||||||    
T  8928798 ctttttatggagttgaatatgaggttgttatgatgttacatga 8928840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 24178803 - 24178918
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||||||  ||||||||||||    
T  24178803 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcgt--ttataagaggtg 24178900  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  24178901 gtgtactcttacattgtt 24178918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 35961812 - 35961927
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | |||||| |||||||| |||||| |||| ||||||   |||||||||||| |||||| |||||||  ||||||||||||    
T  35961812 gttgttgaagtcgtagttgaagctgttgctggtgattttttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcgt--ttataagaggtg 35961909  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  35961910 gtgtactcttacgttgtt 35961927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 16839978 - 16840035
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  16839978 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttactttgt 16840035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 17691999 - 17692115
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||   |||||||||||| |||||| |||| ||| |||||||| |||    
T  17691999 gttgttgaagtcgtagttgaagctgttgttggtgattgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ttataagatgtg 17692097  T
Q  116 gtgtactcttactttgtt 133  Q
     ||||||||||| |||||    
T  17692098 atgtactcttacgttgtt 17692115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 34852827 - 34852963
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatct----gttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttactt 96  Q
    ||||||||||| ||||||||||||||||||||||||||  |    ||||||||||| || ||||||||| |||| |  |||||||| ||||  |||||||    
T  34852827 tcatcatcgttcgtgttgttgttgaagtcgtagttgtacgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtgatgtacgcttactt 34852926  T
Q  97 -gtcgttgttataagaggtggtgtactcttactttgtt 133  Q
     || || ||||||||||||| |||||||||||||||||    
T  34852927 tgttgt-gttataagaggtgatgtactcttactttgtt 34852963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 5841438 - 5841383
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  5841438 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 5841383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 2248991 - 2249045
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  2248991 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttactt 2249045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 45220448 - 45220558
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttgttataagaggtgg 116  Q
    ||||||||||||||||||| | ||||| |||||||||||||||| | || ||||||  ||||||||||||| |||||| |    || |||||||||||||    
T  45220448 gttgttgaagtcgtagttgaagctgttattggtgattgtttatgtttaggtgttttataagaggtggtgtactcttacgtcgtttttttataagaggtgg 45220547  T
Q  117 tgtactcttac 127  Q
    |||||||||||    
T  45220548 tgtactcttac 45220558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 52990003 - 52990118
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  || |||||||||    
T  52990003 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacattgttgt--ttctaagaggtg 52990100  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  52990101 gtgtactcttacgttgtt 52990118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 14648090 - 14648142
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  14648090 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttac 14648142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 41474 - 41419
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  41474 aagaggtggtgtactcttacttgttgttgttataagaggtggtgtacttttacttt 41419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 2249024 - 2249078
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  2249024 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttacttt 2249078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 14648048 - 14648111
Alignment:
Q  67 tgttttta-aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  14648048 tgtttttataagaggtggtgtactcttacgtgtcgtttttataagaggtggtgtactcttactt 14648111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 14648123 - 14648178
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  14648123 aagaggtggtgtactcttacgtgtcgtttttataagaggtggtgtactcttacttt 14648178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 54876681 - 54876791
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||| ||||||| |||||| |||| ||| ||||||||||||    
T  54876681 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagagttggtgtactcttacgttgttgtt-ttataagaggtg 54876779  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  54876780 gtgtactcttac 54876791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 14647992 - 14648045
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  14647992 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttactt 14648045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 41540 - 41487
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  41540 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 41487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 5841673 - 5841620
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  5841673 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 5841620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 16325613 - 16325666
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  16325613 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 16325666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 24513780 - 24513664
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| ||| ||| |||||||| |||| ||||||  ||||||||||||| |||||| ||||  || || |||||||||    
T  24513780 gttgttgaagtcgtagttgaagctgttattgatgactgtttatgttcaggtgttttgtaagaggtggtgtactcttacgttgttattctt-taagaggtg 24513682  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  24513681 gtgtactcttacgttgtt 24513664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 10834915 - 10834979
Alignment:
Q  174 gtgttgaatgcgaggttgttatgat-attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||  |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  10834915 gtgttgaatatgaggttgttatgatgattacatgatgttatctatgagttgttaaatgtacttga 10834979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 14648024 - 14648076
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  14648024 aagaggtggtgtactcttacttgttgtttttataagaggtggtgtactcttac 14648076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 21837254 - 21837147
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||| |||| |||||||| || | ||||||  |||||||| |||| |||||| |||| ||| ||||||||||||    
T  21837254 gttgttgaagtcgtagttgaagctgttgttagtgactgtttatgttctggtgttttataagaggtgatgtactcttacgttgttgtt-ttataagaggtg 21837156  T
Q  116 gtgtactct 124  Q
    |||||||||    
T  21837155 gtgtactct 21837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 16839947 - 16839999
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  16839947 aagaggtggtgta--cttacttgtcgtttttataagaggtggtgtactcttactt 16839999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 22651983 - 22651873
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||| |||| ||| |||| || | ||||||  |||||||| |||| |||||| |||| ||| ||||||||||||    
T  22651983 gttgttgaagtcgtagttgaagctgttgttagtgactgtatatgttctggtgttttataagaggtgatgtactcttacgttgttgtt-ttataagaggtg 22651885  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  22651884 gtgtactcttac 22651873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 16325580 - 16325634
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||    
T  16325580 aagaggtggagtactcttacttgtcgcttttataagaggtggtgtactcttactt 16325634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 24180410 - 24180467
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||    
T  24180410 aagaggtggtgtactcttacttgtcatt-ttataagaggtggtgtactcttacgttgtt 24180467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 17685810 - 17685926
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| | |||||| |||| ||||||   ||||||| |||| ||||||  ||| ||| |||||||| |||    
T  17685810 gttgttgaagtcgtagttgaagctgttgttggtgactatttatgttcaggtgttttgtgagaggtgatgtactcttacggtgttgtt-ttataagatgtg 17685908  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  17685909 gtgtactcttacgttgtt 17685926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 3265173 - 3265286
Alignment:
Q  20 tgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgt-tataagaggtggt 117  Q
    |||| |||||||||||| | ||||| ||||||| ||||||||| ||| ||||||   |||||||||||| |||||   || ||||| |||||||||||||    
T  3265173 tgttaaagtcgtagttgaagctgttattggtgagtgtttatgttcaggtgttttgtgagaggtggtgtactcttag--gttgttgtctataagaggtggt 3265270  T
Q  118 gtactcttactttgtt 133  Q
    |||||||||| |||||    
T  3265271 gtactcttacgttgtt 3265286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 2249056 - 2249115
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  2249056 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 2249115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 11914486 - 11914542
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  11914486 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacgttgtt 11914542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 14966008 - 14965900
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    |||||||||||||||| || | || ||||||||||||||||||| |||| |||||    |||||||||||| |||||| |||| ||  |||||||||||     
T  14966008 gttgttgaagtcgtagctgaagctattgttggtgattgtttatgttcaggtgtttggtgagaggtggtgtactcttacgttgttgt--ttataagaggta 14965911  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  14965910 gtgtactctta 14965900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 24513593 - 24513537
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  24513593 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacgttgtt 24513537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 41507 - 41453
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||| || ||  ||||||||||||||||||||||||||    
T  41507 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttactt 41453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 5841471 - 5841417
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| |||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  5841471 aagaggcggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 5841417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 11912719 - 11912662
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||    
T  11912719 aagaggtggtgtactcttacttggtcgtt-ttataagagatggtgtactcttactttgt 11912662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 16325680 - 16325734
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||| || ||  ||||||||||||||||||||||||||    
T  16325680 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttactt 16325734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 35962193 - 35962248
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||||||||||||| ||||    
T  35962193 aagaggtggtgtactcttatttgtcgtt--tataagaggtggtgtactcttacgttgt 35962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 45220539 - 45220597
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||  ||||||||| |||||||||||||| |||||    
T  45220539 aagaggtggtgtactcttacgtgtcgtctttataagagatggtgtactcttacgttgtt 45220597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 45220736 - 45220794
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||  ||||||  |||||||||||||||||||||||| |||||    
T  45220736 aagaggtggtgtactcttaggtgtcgtctttataagaggtggtgtactcttacgttgtt 45220794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11912816 - 11912759
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgttt 58  Q
    ||||||||||||||||||||||||| |||||||||||| |  | || |||||||||||    
T  11912816 tcatcatcgttggtgttgttgttgatgtcgtagttgtagccatcgtgggtgattgttt 11912759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 16840045 - 16840098
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| | |||| |||||||| ||||||||||||||||||||||||    
T  16840045 aagaggtggtgtactattaccttgtcgtttttataagaggtggtgtactcttac 16840098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 5841504 - 5841452
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||   ||||||||| |||||||||||||    
T  5841504 aagaggtggtgtactcttacttgtcgtgtctataagaggcggtgtactcttac 5841452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 24178926 - 24178983
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  24178926 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcttacgttgtt 24178983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 13436090 - 13436031
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||||| || |||||||| ||||||  ||||||||||||||||||||||| |||||    
T  13436090 aagaggtggtatactcttactttgtcgtttatataagaggtggtgtactcttacgttgtt 13436031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 45220802 - 45220861
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| | ||||||  ||||| || |||||||||||||||||||||||||||    
T  45220802 aagaggtggtgtactattactttatcgtttttctaagaggtggtgtactcttactttgtt 45220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 5841640 - 5841586
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||| || ||  || |||||||||||||||||||||||    
T  5841640 aagaggtggtgtactcttactcgttgtctttctaagaggtggtgtactcttactt 5841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 11912650 - 11912597
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  11912650 aagaggtggtgtactcttacttggtcgtt-ttataagaggtcgtgtactcttact 11912597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 11912755 - 11912698
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgtt--ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||||| ||||| ||  ||||||||||||||||||||||||    
T  11912755 aagaggtggtgtactcttacttggtcgtttttttataagaggtggtgtactcttactt 11912698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 12853363 - 12853401
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  12853363 attacatgatgttatctatgagttgttaaatgtacttga 12853401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 13436123 - 13436066
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| || ||||||||||||||| ||||||||||||||    
T  13436123 aagaggtggtgtactcttacgttgttgt-gttataagaggtggtatactcttactttgt 13436066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 14670105 - 14670067
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  14670105 attacatgatgttatctatgagttgttaaatgtacttga 14670067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 16325646 - 16325700
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgt-tgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| ||||||| || || | |||||||||||||||||||||||||    
T  16325646 aagaggtggtgtactcttactcgttgtcttttataagaggtggtgtactcttact 16325700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 16795582 - 16795544
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  16795582 attacatgatgttatctatgagttgttaaatgtacttga 16795544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 16840011 - 16840069
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||| |||||  ||||||||||||||||||| |||| ||||    
T  16840011 aagaggtggtgtactcttactttgtcgtctttataagaggtggtgtactattaccttgt 16840069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 35962031 - 35962086
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||| ||||||||  ||||||||||| ||||||||||| ||||    
T  35962031 aagaggtggtgtactcttatttgtcgtt--tataagaggtgttgtactcttacgttgt 35962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 11914297 - 11914374
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac 94  Q
    ||||| ||||||||||||| |  |||| ||||||| |||||||| |||| ||||||  ||||||||||||| ||||||    
T  11914297 gttgtcgaagtcgtagttgaagttgttattggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttac 11914374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 11914469 - 11914507
Alignment:
Q  89 tcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  11914469 tcttacttgtcgtt--tataagaggtggtgtactcttactt 11914507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 35962127 - 35962179
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| | |||| |||||||| ||||||||||||||||||||||||    
T  35962127 aagaggtggtgtactattacgttgtcgtt-ttataagaggtggtgtactcttac 35962179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 14965885 - 14965828
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  || |||||| |||||||||||||||||||||| |||||    
T  14965885 aagaggtggtgtactcttac--gttgttgtttataagaggtggtgtactcttacgttgtt 14965828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 35962062 - 35962119
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||| |||| |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  35962062 aagaggtgttgtactcttacgttgtcgtt--tataagaggtggtgtactcttacgttgtt 35962119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 19076094 - 19075930
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    |||||||| |||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19076094 aagaggtgttgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 19075995  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19075994 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 19075930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 31253084 - 31253248
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31253084 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttaccttgtttatgttgatgagtatgacgaggttatgatgatcttctat 31253183  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  31253184 agtgttgaatgcgaggttgttatgatattacatgaggttacctacaagttgttaaatgtacttga 31253248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 33473834 - 33473969
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||||||||    
T  33473834 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatatt 33473933  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||| ||||||||||||||||||||||    
T  33473934 acatgaggttacccatgagttgttaaatgtacttga 33473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 33473497 - 33473624
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| | |||| |||||||| || ||||||||||||| |||||||||||||    
T  33473497 atcatcgttggtgttgttgttgaagttgtagttgtatctgttgttgatgattgatcatgttagatgtttctataagaggtggtgtactcttacttgtcgt 33473596  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      ||||||||||||||||||||||||||    
T  33473597 ctttataagaggtggtgtactcttactt 33473624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 36459722 - 36459591
Alignment:
Q  104 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 203  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||  | |||||||||||||| |||| |||| |||| ||||    
T  36459722 ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttatagtgttgaatgagaggctgttttgatgttac 36459623  T
Q  204 atgaggttacctatgagttgttaaatgtactt 235  Q
    |||| |||| ||||||||||||||||||||||    
T  36459622 atgatgttatctatgagttgttaaatgtactt 36459591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 43243442 - 43243568
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgtt 102  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||| |||||||||  ||||||||||||| |||||| ||||||     
T  43243442 atcatcgttggtgttgttgttgaagtagtagttgtatccgttgttggtgattgatcatgttagatgttttataagaggtggtgtactcttacgtgtcgtc 43243541  T
Q  103 gttataagaggtggtgtactcttactt 129  Q
     ||||||||||||||||||||||||||    
T  43243542 tttataagaggtggtgtactcttactt 43243568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 36460065 - 36459934
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||||||||||||||||| |||||||||||| |  | ||||||||||||||||||||| ||||||  ||||||||||||| |||||| ||||     
T  36460065 tcatcatcgttggtgttgttgttgatgtcgtagttgtagccatcgttggtgattgtttatgtcaggtgttttataagaggtggtgtactcttacattgtt 36459966  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    ||  |||||||||||||||||||||||| |||||    
T  36459965 gt--ttataagaggtggtgtactcttacattgtt 36459934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 10816352 - 10816217
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| ||||     
T  10816352 tcatcatcgtccgtgttgttgttgaagtcgtagttgtagctgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgtt 10816253  T
Q  100 gttg--ttataagaggtggtgtactcttactttgtt 133  Q
    ||||  |||||||||||||||||||||||| |||||    
T  10816252 gttgttttataagaggtggtgtactcttacgttgtt 10816217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 23538378 - 23538246
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||  |||||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| ||||     
T  23538378 tcatcatcgtccgtgttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttacgttgtt 23538279  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    | |||||||||||||||||||||||||| |||||    
T  23538278 g-tgttataagaggtggtgtactcttacgttgtt 23538246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 19076349 - 19076241
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttg-ttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||  ||||||||||||| ||||||  ||||||| ||||||||||||    
T  19076349 gttgttgaagtcgtagttgaagctgttgttggtgattgtttatgttcaggtgttttataagaggtggtgtactcttac--gtcgttgattataagaggtg 19076252  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  19076251 gtgtactctta 19076241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 33473603 - 33473658
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33473603 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 33473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 33473670 - 33473725
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33473670 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 33473725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 33473737 - 33473792
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33473737 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 33473792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 17010853 - 17010744
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||    ||||||||||| |||||| |||| ||| ||||||||||||    
T  17010853 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcagatgttttgtgggaggtggtgtactcttacgttgttgtt-ttataagaggtg 17010755  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  17010754 gtgtactctta 17010744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 43243680 - 43243769
Alignment:
Q  76 agaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 163  Q
    |||||||| ||| |||||||| || ||||| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  43243680 agaggtggcgtactcttactttgttgttgtctataagaggtggtttactcttacgttgtttatgttgatgagtatgatgaggttatgatg 43243769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 43243603 - 43243667
Alignment:
Q  67 tgttttta-aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    |||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  43243603 tgtttttataagaggtggtgtactcttacgtgtcgtttttataagaggtggtgtactcttacttt 43243667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 43243547 - 43243600
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  43243547 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttactt 43243600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 43243579 - 43243631
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  43243579 aagaggtggtgtactcttacttgttgtttttataagaggtggtgtactcttac 43243631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 262987 - 262881
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgttataagaggtgg 116  Q
    ||||||||| ||||||||| | |||||||| |||| ||||||||| | | ||||||  ||||||||||||| |||||| ||  ||| |||||||||||||    
T  262987 gttgttgaattcgtagttgaagctgttgttagtgactgtttatgttctggtgttttataagaggtggtgtactcttacgtggtgtt-ttataagaggtgg 262889  T
Q  117 tgtactct 124  Q
    ||||||||    
T  262888 tgtactct 262881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 29447843 - 29447728
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    |||||| |||||||||||| | ||| ||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  ||||||||||||    
T  29447843 gttgttaaagtcgtagttgaagctgatgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtg 29447746  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||| ||| |||||    
T  29447745 gtgtactcgtacgttgtt 29447728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 31252984 - 31253042
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||||| |||||    
T  31252984 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttacgttgtt 31253042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 36459853 - 36459796
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  36459853 aagaggtggtgtactcttacttggtcgtt-ttataagaggtggtgtactcttactttgt 36459796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 31253050 - 31253109
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  31253050 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 31253109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 19076128 - 19076069
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || ||||||||| |||||||||||||||||    
T  19076128 aagaggtggtgtactcttactttatcgtttttctaagaggtgttgtactcttactttgtt 19076069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 36459783 - 36459725
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||| |||||    
T  36459783 aagaggtggtgtactcttacttggtcgtt-ttataagagatggtgtactcttacgttgtt 36459725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 15238117 - 15238155
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  15238117 attacatgatgttatctatgagttgttaaatgtacttga 15238155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 22108449 - 22108487
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  22108449 attacatgatgttatctatgagttgttaaatgtacttga 22108487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 41861618 - 41861727
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||  ||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| |||  ||||| |||||    
T  41861618 gttgttgaagtcagagttgaaggtgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ctataaaaggtg 41861716  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  41861717 gtgtactctta 41861727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 41861841 - 41861896
Alignment:
Q  76 agaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||||||| ||||| ||||||||  ||||||||||||| ||||||||| |||||    
T  41861841 agaggtggtgtactcttagttgtcgtt--tataagaggtggtttactcttacgttgtt 41861896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 6765687 - 6765599
Alignment:
Q  46 ttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||| ||||||||| ||| ||||||   |||||||||||| |||||| ||||  || |||||||||||||||||||||||| |||||    
T  6765687 ttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttctt-ttataagaggtggtgtactcttacgttgtt 6765599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 19076193 - 19076136
Alignment:
Q  76 agaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    |||||||||||| |||||  ||||||||||  |||||||||||||||||||||| |||||    
T  19076193 agaggtggtgtactctta--tgtcgttgttctataagaggtggtgtactcttacgttgtt 19076136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 24212191 - 24212139
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||    
T  24212191 aagaggtagtgtactcttacgttgtcgtt-ttataagaggtggtgtactcttac 24212139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 33473770 - 33473827
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttg 131  Q
    ||||||||||||| ||||||||  | ||| || |||||||||||||||||||||||||    
T  33473770 aagaggtggtgtactcttactttattgtttttctaagaggtggtgtactcttactttg 33473827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 19076161 - 19076106
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||| ||||  || |||||||||||||||||||||||||||    
T  19076161 aagaggtggtgtactcttacgttgttatt-ttataagaggtggtgtactcttacttt 19076106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 31253017 - 31253072
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||| ||||  || |||||||||||||||||||||||||||    
T  31253017 aagaggtggtgtactcttacgttgttatt-ttataagaggtggtgtactcttacttt 31253072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 36459820 - 36459762
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt---ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||| |||||| ||   ||||||||||||||||||||||||    
T  36459820 aagaggtggtgtactcttactttgtcgttttttttataagaggtggtgtactcttactt 36459762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 11945199 - 11945035
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945199 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 11945100  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11945099 agtgttgaatgcgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttga 11945035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 43630866 - 43631030
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630866 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 43630965  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43630966 agtgttgaatgcgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttga 43631030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 11809824 - 11809987
Alignment:
Q  76 agaggtggtgtagtcttactt-gtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    |||||||||||| |||||||| || |||||  || ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  11809824 agaggtggtgtactcttactttgttgttgtccatgagaggtggtatactcttacgttggttatgttgatgagtatgacgaggttatgatgatcatctata 11809923  T
Q  174 gtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11809924 gtgttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttga 11809987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 75 - 232
Target Start/End: Original strand, 636445 - 636596
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  636445 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatct------ 636538  T
Q  174 gtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgta 232  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  636539 -tgttgaatgcgatgttgttatgatattacatgaggttacctatgagttgttaaatgta 636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 20031825 - 20031951
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgtt 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||  ||||||||||||| |||||| |||||||    
T  20031825 atcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgatcatgttagatgttttataagaggtggtgtactcttacgtgtcgtt 20031924  T
Q  103 gttataagaggtggtgtactcttactt 129  Q
     ||||||||||||||||||||||||||    
T  20031925 tttataagaggtggtgtactcttactt 20031951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 11945472 - 11945339
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgt 98  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||  |||||||| |||| |||||| ||||    
T  11945472 tcatcatcgttggtgttgttgttgaagtcgtagttgtagctgttgttggtgattgtttatgttcagatgttttataagaggtgatgtactcttacgttgt 11945373  T
Q  99 cgttgttataagaggtggtgtactcttactttgtt 133  Q
     |||| |||||| |||||||||||||||| |||||    
T  11945372 tgttg-tataaggggtggtgtactcttacgttgtt 11945339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 20032095 - 20032185
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 163  Q
    ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  20032095 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 20032185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 29534496 - 29534363
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgt 101  Q
    ||||||||  |||||||||||||||||||||||||| |  |||||||||| || ||||||||| |||| |  ||||||| ||||| |||||| |||| ||    
T  29534496 atcatcgtccgtgttgttgttgaagtcgtagttgtagccattgttggtgaatgattatgtcaggtgttgtgtaagaggtagtgtactcttactttgttgt 29534397  T
Q  102 tg--ttataagaggtggtgtactcttactttgtt 133  Q
    ||  |||||||||||||||||||||||| |||||    
T  29534396 tgttttataagaggtggtgtactcttacgttgtt 29534363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 23073002 - 23072886
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttgt--tataagaggt 114  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||    ||||||||||| ||||||  ||||||||  ||||||||||    
T  23073002 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcagatgttttgtgggaggtggtgtactcttac--gtcgttgttctataagaggt 23072905  T
Q  115 ggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||    
T  23072904 ggtgtactcttacgttgtt 23072886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 43630415 - 43630530
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| |||||||||||||||| | || ||||||  ||||||||||||| |||||| |||| |||| |||||||||||    
T  43630415 gttgttgaagtcgtagttgaagctgttattggtgattgtttatgtttaggtgttttataagaggtggtgtactcttacgttgttgttg-tataagaggtg 43630513  T
Q  116 gtgtactcttactttgt 132  Q
    |||||||||||| ||||    
T  43630514 gtgtactcttacgttgt 43630530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 636412 - 636467
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  636412 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 636467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 20032028 - 20032083
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  20032028 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 20032083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 25263124 - 25263232
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttg-ttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||  ||||||||||||| |||||  ||| |||| |||||||| |||    
T  25263124 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtaagaggtggtgtactctta--tgttgttgtttataagatgtg 25263221  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  25263222 gtgtactctta 25263232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 46198623 - 46198733
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||| |||| |||||||| || ||||||||  ||||||||||||| |||||| |||| |||  |||||||||||    
T  46198623 gttgttgaagtcgtagttgaagctgttgttagtgactgtttatgttctgatgttttataagaggtggtgtactcttacgttgttgtt-atataagaggtg 46198721  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  46198722 gtgtactcttac 46198733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 11809532 - 11809648
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| | |||||| |||| ||||||   |||||||||||| |||||| |||| ||| ||||||||||||    
T  11809532 gttgttgaagtcgtagttgaagctgttgttggtgactatttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ttataagaggtg 11809630  T
Q  116 gtgtactcttactttgtt 133  Q
    ||||||||| || |||||    
T  11809631 gtgtactctcacgttgtt 11809648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 11809721 - 11809776
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  11809721 aagaggtggtgtactcttacttgttgtttttataagaggtggtgtactcttacttt 11809776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 27653513 - 27653623
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||  ||||||  ||||||||||||| |||||| |||| |||  |||||||||||    
T  27653513 gttgttgaagtcgtagttgaagatgttgttggtgactgtttatgttcaagtgttttgtaagaggtggtgtactcttacgttgttgtt-ctataagaggtg 27653611  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  27653612 gtgtactcttac 27653623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 29764562 - 29764672
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||||| ||||    ||||||||||| |||||| |||| |||  |||||||||||    
T  29764562 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcagatattttgtgggaggtggtgtactcttacgttgttgtt-atataagaggtg 29764660  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  29764661 gtgtactcttac 29764672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 11809689 - 11809742
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  11809689 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttactt 11809742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 20031930 - 20031983
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  20031930 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttactt 20031983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 636160 - 636272
Alignment:
Q  22 ttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgt 119  Q
    ||||||||||||||| | ||||||| ||||| |||||||| | || ||||||   |||||||||||| |||||| |||||||| || |||||||||||||    
T  636160 ttgaagtcgtagttgaagctgttgtcggtgactgtttatgtttaggtgttttgtgagaggtggtgtactcttacgttgtcgtt-ttctaagaggtggtgt 636258  T
Q  120 actcttactttgtt 133  Q
    |||||||| |||||    
T  636259 actcttacgttgtt 636272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 636346 - 636399
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  636346 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 636399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 20031962 - 20032014
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  20031962 aagaggtggtgtactcttacttgttgtttttataagaggtggtgtactcttac 20032014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 636313 - 636367
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||| ||||| | ||||||||||||||||||||||||||    
T  636313 aagaggtggtgtactcttacgtgtcgcttttataagaggtggtgtactcttactt 636367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 11945299 - 11945241
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||||| |||||    
T  11945299 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttacgttgtt 11945241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 43630767 - 43630825
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||||||||||| |||||    
T  43630767 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttacgttgtt 43630825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 11809745 - 11809813
Alignment:
Q  67 tgttttta-aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||| ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  11809745 tgtttttataagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 11809813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 11945233 - 11945174
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  11945233 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 11945174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 20031986 - 20032049
Alignment:
Q  67 tgttttta-aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||||| ||||||||||||| |||||| ||||||  | ||||||||||||||||||||||||    
T  20031986 tgtttttataagaggtggtgtactcttacgtgtcgtcttgataagaggtggtgtactcttactt 20032049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 20032061 - 20032120
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  20032061 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 20032120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 22147777 - 22147833
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  22147777 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacgttgtt 22147833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 636379 - 636433
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||| || ||  ||||||||||||||||||||||||||    
T  636379 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttactt 636433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 11809656 - 11809710
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||| ||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  11809656 aagagatggtgtactcttacgtgtcgttttcataagaggtggtgtactcttactt 11809710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 29533992 - 29533934
Alignment:
Q  174 gtgttgaatgcgaggttgttatgatattacatgaggtt-acctatgagttgttaaatgt 231  Q
    |||||||||  ||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  29533992 gtgttgaatatgaggttgttatgatattacatgatgttaagctatgagttgttaaatgt 29533934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 10492081 - 10492195
Alignment:
Q  19 ttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtgg 116  Q
    |||||||||||||||||| | ||||| ||||||| ||| |||| |||| ||||||   ||||||| |||| |||||| ||||  |  |||||||||||||    
T  10492081 ttgttgaagtcgtagttgaagctgttattggtgactgtctatgttcaggtgttttgtgagaggtgatgtactcttacgttgt--tatttataagaggtgg 10492178  T
Q  117 tgtactcttactttgtt 133  Q
    ||||||||||| |||||    
T  10492179 tgtactcttacgttgtt 10492195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 10492267 - 10492324
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  10492267 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcttacgttgtt 10492324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 21740065 - 21740122
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  21740065 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcttacgttgtt 21740122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 25263312 - 25263369
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  25263312 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcttacgttgtt 25263369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 23072779 - 23072721
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||||||  |||||||||||||||||||||||| |||||    
T  23072779 aagaggtggtgtactcttacgttgtcgta-ttataagaggtggtgtactcttacgttgtt 23072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 22132098 - 22132136
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  22132098 attacatgatgttatctatgagttgttaaatgtacttga 22132136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 43630569 - 43630619
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactctt 125  Q
    ||||||||||||| |||||| ||||||  ||||| ||||||||||||||||    
T  43630569 aagaggtggtgtactcttacgtgtcgtctttataggaggtggtgtactctt 43630619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 43630669 - 43630726
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| ||||| |||||||||||||||||||||| ||||    
T  43630669 aagaggtggtgtactcttacgttgttgttgt-ataagaggtggtgtactcttacgttgt 43630726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 43630702 - 43630753
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  43630702 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcttac 43630753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 636280 - 636332
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||| |||||||| | ||||||||||||||||||||||    
T  636280 aagaggtggtgtactcttacgttgtcgttct-ataagaggtggtgtactcttac 636332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 13513687 - 13513635
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||| |||||||  ||||||||||||||||||||||||    
T  13513687 aagaggtggtgtactcttacgttgtcgtc-ttataagaggtggtgtactcttac 13513635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 43630506 - 43630556
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| ||||||  || || |||||||||||||||||||||||||    
T  43630506 aagaggtggtgtactcttac--gttgtcgttataagaggtggtgtactcttac 43630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 10492202 - 10492259
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||| ||| |||||    
T  10492202 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcatacattgtt 10492259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 11945266 - 11945211
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||| ||||  || |||||||||||||||||||||||||||    
T  11945266 aagaggtggtgtactcttacgttgttatt-ttataagaggtggtgtactcttacttt 11945211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 20316074 - 20316017
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  || |||||| |||||||||||||||||||||| |||||    
T  20316074 aagaggtggtgtactcttac--gttgttgtttataagaggtggtgtactcttacattgtt 20316017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 133; Significance: 3e-69; HSPs: 6)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 215 - 51
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  215 aagaggtggtgtactcttactttgttgttgtctttaagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 116  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  115 agtgttgaatgcgaggttgttatgatattacatgaggttacctttgagttgttaaatgtacttga 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 439 - 329
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgttataagaggtgg 116  Q
    ||||||||||||||||||| |   ||||||||||| ||||||||| ||| ||||||  ||||||||||||| |||||| ||||||  |||||||||||||    
T  439 gttgttgaagtcgtagttgaagtagttgttggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttacgtgtcgtctttataagaggtgg 340  T
Q  117 tgtactcttac 127  Q
    |||||||||||    
T  339 tgtactcttac 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 348 - 296
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  348 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttac 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 249 - 190
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  249 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 315 - 257
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| | ||||  |||||||||||||||||||||||| |||||    
T  315 aagaggtggtgtactcttacgtatcgtctttataagaggtggtgtactcttacgttgtt 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 282 - 227
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||| ||||  || |||||||||||||||||||||||||||    
T  282 aagaggtggtgtactcttacgttgttatt-ttataagaggtggtgtactcttacttt 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 129; Significance: 7e-67; HSPs: 7)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 3171 - 3303
Alignment:
Q  105 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 204  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3171 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 3270  T
Q  205 tgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||    
T  3271 tgaggttacctatgagttgttaaatgtacttga 3303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 2903 - 2958
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2903 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 2714 - 2829
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||||||  ||||||||||||    
T  2714 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcgt--ttataagaggtg 2811  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  2812 gtgtactcttacgttgtt 2829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 3072 - 3127
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  3072 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 3127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 2837 - 2890
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  ||||||||||| |||||||||||||    
T  2837 aagaggtggtgtactcttacttgtcgtctttataagaggtagtgtactcttact 2890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 3039 - 3093
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| |||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  3039 aagaggcggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 3006 - 3058
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||   ||||||||| |||||||||||||    
T  3006 aagaggtggtgtactcttacttgtcgtgtctataagaggcggtgtactcttac 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 11394784 - 11394916
Alignment:
Q  105 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 204  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11394784 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 11394883  T
Q  205 tgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||    
T  11394884 tgaggttacctatgagttgttaaatgtacttga 11394916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 16185729 - 16185565
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    |||||||||| || |||||||| || ||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  16185729 aagaggtggtatactcttactttgttgttgtctatgagaggtggtgtactcttacgttggttatgttgatgagtatgacgaggttatgatgatcttctat 16185630  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16185629 agtgttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttga 16185565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 41283821 - 41283686
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||||||||    
T  41283821 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatatt 41283722  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  41283721 acatgaggttacctatgagttgttaaatgtacttga 41283686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 34957289 - 34957159
Alignment:
Q  2 catcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgt 101  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||    
T  34957289 catcatcgttggtgttgttgttgaagtcgtagttgtaaccgttgttggtgattgtttatgtcaggtgttttataagaggtggtgtactcttacttgtcgt 34957190  T
Q  102 tgttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||||||||||||||||||||||    
T  34957189 tgttataagaggtggtgtactcttactttgt 34957159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13892544 - 13892416
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcg 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||  ||||||||| ||| ||||||||||||    
T  13892544 tcatcatcgttggtgttgttgttgaagtcgtagttgtagccgttgttggtgattgtttatgtcaggtgttttataagaggtggcgtactcttacttgtcg 13892445  T
Q  101 ttgttataagaggtggtgtactcttactt 129  Q
    || ||||||||||||||| ||||||||||    
T  13892444 tttttataagaggtggtggactcttactt 13892416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 29003940 - 29003815
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcg 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||     
T  29003940 tcatcatcgttggtgttgttgttgaagtcgtagttgtagccgttgttggtgattgtttatgtcaggtgttttataagaggtggtgtactcttacttgtcc 29003841  T
Q  101 ttgttataagaggtggtgtactctta 126  Q
    |  |||||||||||||||||||||||    
T  29003840 tgtttataagaggtggtgtactctta 29003815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 104 - 237
Target Start/End: Complemental strand, 15213222 - 15213089
Alignment:
Q  104 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 203  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||  | |||||||||||||| |||| |||| |||| ||||    
T  15213222 ttataagaggtggtgtactcttacgttgtttatgttgatgattatcacgatgttatgatgattgtttatagtgttgaatgagaggctgttttgatgttac 15213123  T
Q  204 atgaggttacctatgagttgttaaatgtacttga 237  Q
    |||| |||| | ||||||||||||||||||||||    
T  15213122 atgatgttatccatgagttgttaaatgtacttga 15213089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15213594 - 15213468
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcg 100  Q
    ||||||||||||||||||||||| | |||||||| ||| |  | ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||    
T  15213594 tcatcatcgttggtgttgttgtttatgtcgtagtggtagccatcgttggtgattgtttatgtcaggtgttttataagaggtggtgtactcttacttgtcg 15213495  T
Q  101 ttgttataagaggtggtgtactcttac 127  Q
    || |||||||||||| |||||||||||    
T  15213494 tttttataagaggtgatgtactcttac 15213468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 833533 - 833673
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgt 101  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| |||| ||    
T  833533 atcatcgtctgtgttgttgttgaagtcgtagttgtagttgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgttgt 833632  T
Q  102 tg--ttataagaggtggtgtactcttactttgtttatgttg 140  Q
    ||  |||||| |||||||||||||| || ||||||||||||    
T  833633 tgttttataaaaggtggtgtactctcacgttgtttatgttg 833673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 1198713 - 1198853
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgt 101  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| |||| ||    
T  1198713 atcatcgtctgtgttgttgttgaagtcgtagttgtagttgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgttgt 1198812  T
Q  102 tg--ttataagaggtggtgtactcttactttgtttatgttg 140  Q
    ||  |||||| |||||||||||||| || ||||||||||||    
T  1198813 tgttttataaaaggtggtgtactctcacgttgtttatgttg 1198853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 837529 - 837659
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgt 101  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||||| || ||||| ||| ||||||  ||||||||||||| |||||| |||| |     
T  837529 atcatcgtccgtgttgttgttgaagtcgtagttgtagttgttgttggtgaatgattatggcaggtgttttgtaagaggtggtgtactcttactttgttg- 837627  T
Q  102 tgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||||||||| ||||||||||| |||||    
T  837628 tgttataagaggtgatgtactcttacgttgtt 837659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 1202709 - 1202839
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgt 101  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||||| || ||||| ||| ||||||  ||||||||||||| |||||| |||| |     
T  1202709 atcatcgtccgtgttgttgttgaagtcgtagttgtagttgttgttggtgaatgattatggcaggtgttttgtaagaggtggtgtactcttactttgttg- 1202807  T
Q  102 tgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||||||||| ||||||||||| |||||    
T  1202808 tgttataagaggtgatgtactcttacgttgtt 1202839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 14416427 - 14416552
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgt 98  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||| ||||||||| ||| ||||| | ||||||||||||| |||||| ||||    
T  14416427 tcatcatcgtccgtgttgttgttgaagtcgtagttgaagctgttgttggtgactgtttatgtccaggtgtttgt-aagaggtggtgtactcttacgttgt 14416525  T
Q  99 cgttgttataagaggtggtgtactctta 126  Q
     ||| |||||||||||||||||||||||    
T  14416526 tgtt-ttataagaggtggtgtactctta 14416552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 41284140 - 41284029
Alignment:
Q  19 ttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgttgttataagaggtggt 117  Q
    |||||||||||||||||||||| |||||||||||||| | | || |||||||| || |||||||| |||| |||||| |||| |  ||||||||||||||    
T  41284140 ttgttgaagtcgtagttgtatccgttgttggtgattgatcaggttagatgtttctataagaggtgatgtactcttacgtgtcatctttataagaggtggt 41284041  T
Q  118 gtactcttactt 129  Q
    ||||||||||||    
T  41284040 gtactcttactt 41284029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 11394516 - 11394571
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11394516 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 11394571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 41283918 - 41283863
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41283918 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 41283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 16251519 - 16251575
Alignment:
Q  76 agaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  16251519 agaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttactttgt 16251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 46580956 - 46581071
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| |||  |||||||||||    
T  46580956 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ctataagaggtg 46581054  T
Q  116 gtgtactcttactttgt 132  Q
    |||||||||||| ||||    
T  46581055 gtgtactcttacgttgt 46581071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 11394330 - 11394442
Alignment:
Q  21 gttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtg 118  Q
    |||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||||||  |||||||||||||||    
T  11394330 gttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcgt--ttataagaggtggtg 11394427  T
Q  119 tactcttactttgtt 133  Q
    ||||||||| |||||    
T  11394428 tactcttacgttgtt 11394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 16185796 - 16185741
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  16185796 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 16185741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 16251715 - 16251772
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  16251715 aagaggtggtgtactcttacttgtcatttttataagaggtggtgtactcttactttgt 16251772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 16251781 - 16251838
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  16251781 aagaggtggtgtactcttacttgttgtttttataagaggtggtgtactcttactttgt 16251838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 41284050 - 41283998
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  41284050 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttac 41283998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 11394685 - 11394740
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  11394685 aagaggtggtgtactcttacttgtcatttttataagaggtggtgtactcttacttt 11394740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 14157262 - 14157376
Alignment:
Q  20 tgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggt 117  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| |||  |||||||||||||    
T  14157262 tgttgaagtcgtagttgaagctgttattggtgagtgtttatgctcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ctataagaggtggt 14157360  T
Q  118 gtactcttactttgtt 133  Q
    |||||||||| |||||    
T  14157361 gtactcttacgttgtt 14157376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 15719825 - 15719715
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||  | ||||||||||| | |||||||| |||| ||||||   |||||||||||| |||||| |||||| | ||||||||||||    
T  15719825 gttgttgaagtcgtagtttaagctgttgttggtaactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcg-tattataagaggtg 15719727  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  15719726 gtgtactcttac 15719715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 11092686 - 11092571
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgtt-ataagaggtg 115  Q
    ||||||||||| ||||||| | ||||||||||||| | ||||||| ||| ||||||   |||||||||||| ||||||  || |||||| ||||||||||    
T  11092686 gttgttgaagttgtagttgaagctgttgttggtgactatttatgttcaggtgttttgtgagaggtggtgtactcttac--gttgttgtttataagaggtg 11092589  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  11092588 gtgtactcttacgttgtt 11092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 14981716 - 14981831
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||| ||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  |||||||||||     
T  14981716 gttgttgaagtcggagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtt 14981813  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  14981814 gtgtactcttacgttgtt 14981831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 13892437 - 13892380
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||    
T  13892437 aagaggtggtggactcttacttgtcgtttttataagaggtggtgcactcttactttgt 13892380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 14273344 - 14273228
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    |||||||||||| |||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||| |||||| |||||    
T  14273344 gttgttgaagtcttagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ttataaaaggtg 14273246  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  14273245 gtgtactcttacgttgtt 14273228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 16251616 - 16251673
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||    
T  16251616 aagaggtggtgtactcttacttgtcatttttataagaggtgatgtactcttactttgt 16251673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 41283984 - 41283931
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  41283984 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 41283931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 16185919 - 16185810
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||| ||||||||||| | ||||||||||||| |||||||| | || ||||||   |||||||||||| |||||| |||| ||  ||||||||||||    
T  16185919 gttgttggagtcgtagttgaagctgttgttggtgactgtttatgttaaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtg 16185822  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  16185821 gtgtactcttac 16185810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 15213455 - 15213397
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  15213455 aagaggtggtgtactcttacttggtcgtt-ttataagaggtggtgtactcttactttgtt 15213397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 16251590 - 16251637
Alignment:
Q  82 ggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  16251590 ggtgtactcttacttgtcgtttttataagaggtggtgtactcttactt 16251637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 15213385 - 15213328
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  15213385 aagaggtggtgtactcttacttggtcgtt-ttataagaggtggtgtactcttactttgt 15213328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 16185829 - 16185775
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  16185829 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 16185775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 16251682 - 16251736
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  16251682 aagaggtggtgtactcttacttgttatttttataagaggtggtgtactcttactt 16251736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 41284017 - 41283963
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||| ||||| | ||||||||||||||||||||||||||    
T  41284017 aagaggtggtgtactcttacatgtcgcttttataagaggtggtgtactcttactt 41283963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 11394450 - 11394503
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||| ||||||||||||||||||    
T  11394450 aagaggtggtgtactcttacttgtcgtctttataataggtggtgtactcttact 11394503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 16251805 - 16251873
Alignment:
Q  67 tgttttta-aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||| ||||||||||||| |||||||| |||||| ||||||||||||||||| |||||| |||||    
T  16251805 tgtttttataagaggtggtgtactcttactttgtcgtttttataagaggtggtgtattcttacgttgtt 16251873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 34957183 - 34957122
Alignment:
Q  75 aagaggtggtgtagtcttactt----gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||    |||||| |||||||||||||||||||||||||||||    
T  34957183 aagaggtggtgtactcttactttgtcgtcgtttttataagaggtggtgtactcttactttgt 34957122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 1490352 - 1490462
Alignment:
Q  25 aagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaa-agaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtac 121  Q
    |||||||||||| | ||||||||||||| | ||||||| ||| |||||||   |||| ||||||| |||||| |||| ||| ||||||||||||||||||    
T  1490352 aagtcgtagttgaagctgttgttggtgactatttatgttcaggtgtttttgtgagagatggtgtactcttacgttgttgtt-ttataagaggtggtgtac 1490450  T
Q  122 tcttactttgtt 133  Q
    |||||| |||||    
T  1490451 tcttacgttgtt 1490462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 16251748 - 16251802
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  16251748 aagaggtggtgtactcttactttgtcgtt-ttataagaggtggtgtactcttactt 16251802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 34957146 - 34957088
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||    
T  34957146 aagaggtggtgtactcttactttgtcgtt-ttataagaggtggtgtactcttacgttgtt 34957088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 37793713 - 37793819
Alignment:
Q  28 tcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactctt 125  Q
    ||||||||| | ||||||||||||| ||||||||| ||  ||||||   |||||||||||| |||||| |||| ||| | ||||||||||||||||||||    
T  37793713 tcgtagttgaagctgttgttggtgactgtttatgttcatttgttttgtgagaggtggtgtactcttacgttgttgttct-ataagaggtggtgtactctt 37793811  T
Q  126 actttgtt 133  Q
    || |||||    
T  37793812 acgttgtt 37793819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 11084940 - 11084829
Alignment:
Q  22 ttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgt 119  Q
    ||||||| ||||||| | ||||||||||||| | ||||||| ||| ||||||   |||||||||||| ||||||  || |||||| ||||||||||||||    
T  11084940 ttgaagttgtagttgaagctgttgttggtgactatttatgttcaggtgttttgtgagaggtggtgtactcttac--gttgttgtttataagaggtggtgt 11084843  T
Q  120 actcttactttgtt 133  Q
    || ||||| |||||    
T  11084842 acgcttacgttgtt 11084829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 11394652 - 11394706
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| |||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  11394652 aagaggcggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 11394706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 16550928 - 16551038
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttgtt--ataagaggt 114  Q
    |||||||||||||||||||   ||| ||||||||| |||||||| |||||||||||    ||||||||||| ||||   ||| ||||||  |||||||||    
T  16550928 gttgttgaagtcgtagttgaggctgctgttggtgactgtttatgttcagatgttttgtgggaggtggtgtattctt--ctgttgttgtttgataagaggt 16551025  T
Q  115 ggtgtactcttac 127  Q
    |||||||||||||    
T  16551026 ggtgtactcttac 16551038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 16614734 - 16614624
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttgtt--ataagaggt 114  Q
    |||||||||||||||||||   ||| ||||||||| |||||||| |||||||||||    ||||||||||| ||||   ||| ||||||  |||||||||    
T  16614734 gttgttgaagtcgtagttgaggctgctgttggtgactgtttatgttcagatgttttgtgggaggtggtgtattctt--ctgttgttgtttgataagaggt 16614637  T
Q  115 ggtgtactcttac 127  Q
    |||||||||||||    
T  16614636 ggtgtactcttac 16614624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 41283951 - 41283897
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||| || ||  ||||||||||||||||||||||||||    
T  41283951 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttactt 41283897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 13892248 - 13892119
Alignment:
Q  76 agaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatag 174  Q
    |||||||||||| |||||  ||| |||||| ||||||||||||||||||| || ||| |||| ||| | | |||||||| ||||||||||   | ||| |    
T  13892248 agaggtggtgtactctta--tgttgttgtttataagaggtggtgtactctcacattg-ttatattgtttattatgacgatgttatgatgactgtttatgg 13892152  T
Q  175 tgttgaatgcgaggttgttatgatattacatga 207  Q
     |||||||  |||||||||||||| ||||||||    
T  13892151 agttgaatatgaggttgttatgatgttacatga 13892119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16998422 - 16998345
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac 94  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| || |||   |||||||||||| ||||||    
T  16998422 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgatttgtgagaggtggtgtactcttac 16998345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 10501677 - 10501734
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  10501677 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcttacgttgtt 10501734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 11394619 - 11394671
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||   ||||||||| |||||||||||||    
T  11394619 aagaggtggtgtactcttacttgtcgtgtctataagaggcggtgtactcttac 11394671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 29003800 - 29003749
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactctta 126  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||||||    
T  29003800 aagaggtggtgtactcttactttgtcgtt-ttataagaggtggtgtactctta 29003749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 8939980 - 8939924
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||  ||||| |||||    
T  8939980 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtaaccttacgttgtt 8939924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 8940044 - 8939988
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||| ||||| ||||||||||||||  ||||||||||||||| ||||||| |||||    
T  8940044 aagaggtagtgtactcttacttgtcgtt--tataagaggtggtgtgctcttacgttgtt 8939988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 10501806 - 10501864
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| |||||    
T  10501806 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttacgttgtt 10501864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 15116289 - 15116231
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| |||||    
T  15116289 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttacgttgtt 15116231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 15213316 - 15213262
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||    
T  15213316 aagaggtggtgtactcttacttggtcgtt-ttataagagatggtgtactcttactt 15213262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 16185763 - 16185704
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || ||||||||||| |||||||||||||||    
T  16185763 aagaggtggtgtactcttactttatcgtttttctaagaggtggtatactcttactttgtt 16185704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 16251649 - 16251703
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||||| |||| |||||||| |||||| ||||||||||||||||||||||||||    
T  16251649 aagaggtgatgtactcttactttgtcgtt-ttataagaggtggtgtactcttactt 16251703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 34957113 - 34957055
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| || ||||||||||||||||||||||||| |||||    
T  34957113 aagaggtggtgtactcttacgttgttgt-gttataagaggtggtgtactcttacgttgtt 34957055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 1490437 - 1490495
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| |||  ||||||||||||||||||||||| ||||    
T  1490437 aagaggtggtgtactcttacgttgttgtttctataagaggtggtgtactcttacgttgt 1490495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 7520215 - 7520253
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  7520215 attacatgatgttatctatgagttgttaaatgtacttga 7520253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 10607320 - 10607358
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  10607320 attacatgatgttatctatgagttgttaaatgtacttga 10607358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 11092596 - 11092539
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| ||||    
T  11092596 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttacgttgt 11092539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 11660361 - 11660323
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  11660361 attacatgatgttatctatgagttgttaaatgtacttga 11660323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 13891709 - 13891671
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13891709 attacatgatgttatctatgagttgttaaatgtacttga 13891671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 13892092 - 13892054
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13892092 attacatgatgttatctatgagttgttaaatgtacttga 13892054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 13892404 - 13892347
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||| |||||||||||||    
T  13892404 aagaggtggtgcactcttactttgtcgtt-ttataagaggtggtggactcttactttgt 13892347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 15213352 - 15213295
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt--ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||| |||||| ||  ||||||||||||||||||||||||    
T  15213352 aagaggtggtgtactcttactttgtcgtttttttataagaggtggtgtactcttactt 15213295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 16551052 - 16551110
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  |||||||||  |||||||||||||||||||||| |||||    
T  16551052 aagaggtggtgtactcttac--gtcgttgttttataagaggtggtgtactcttacgttgtt 16551110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 16614610 - 16614552
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  |||||||||  |||||||||||||||||||||| |||||    
T  16614610 aagaggtggtgtactcttac--gtcgttgttttataagaggtggtgtactcttacgttgtt 16614552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 20486821 - 20486783
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  20486821 attacatgatgttatctatgagttgttaaatgtacttga 20486783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 29003806 - 29003776
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||||||||||||||||||||||    
T  29003806 tgttataagaggtggtgtactcttactttgt 29003776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 39268313 - 39268351
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  39268313 attacatgatgttatctatgagttgttaaatgtacttga 39268351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 9752507 - 9752544
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttg 236  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  9752507 attacatgatgttatctatgagttgttaaatgtacttg 9752544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 32161124 - 32161165
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgttta 59  Q
    ||||||||||||||||||| | ||||||||||||| ||||||    
T  32161124 gttgttgaagtcgtagttgaagctgttgttggtgactgttta 32161165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 41283885 - 41283828
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttg 131  Q
    ||||||||||||| ||||||||  | ||| || |||||||||||||||||||||||||    
T  41283885 aagaggtggtgtactcttactttattgtttttctaagaggtggtgtactcttactttg 41283828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 10501612 - 10501669
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  || |||||| |||||||||||||||||||||| |||||    
T  10501612 aagaggtggtgtactcttac--gttgttgtttataagaggtggtgtactcttacgttgtt 10501669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 16251909 - 16251969
Alignment:
Q  103 gttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 163  Q
    ||||| |||||||||||||||| || |||||||||||| ||| ||||| |  |||||||||    
T  16251909 gttatgagaggtggtgtactctcacgttgtttatgttgttgaatatgaggttgttatgatg 16251969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 16323824 - 16323767
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  || |||||| |||||||||||||||||||||| |||||    
T  16323824 aagaggtggtgtactcttac--gttgttgtttataagaggtggtgtactcttacgttgtt 16323767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 25928371 - 25928407
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtactt 235  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  25928371 attacatgatgttatctatgagttgttaaatgtactt 25928407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 28708032 - 28707900
Alignment:
Q  105 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 204  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28708032 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 28707933  T
Q  205 tgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||||    
T  28707932 tgaggttacctatgagttgttaaatgtacttga 28707900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 23955545 - 23955410
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||||||||    
T  23955545 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatatt 23955446  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||| ||||||||||||||||||||||    
T  23955445 acatgaggttacccatgagttgttaaatgtacttga 23955410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 9622787 - 9622950
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||  |||||    
T  9622787 aagaggtggtgtactcttaccttgttgttgtctatgagaggtggtgtactcttacgtggtttatgttgatgagtatgacgagcttatgatgattctctat 9622886  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    | ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  9622887 aatgttgaatgtgaggttgttatgatattacatgatgttacctatgagttgtt-aatgtacttga 9622950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 7429791 - 7429665
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgtt 102  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||| |||||||||  ||||||||||||| |||||| |||||||    
T  7429791 atcatcgttggtgttgttgttgaagtagtagttgtatccgttgttggtgattgatcatgttagatgttttataagaggtggtgtactcttacgtgtcgtt 7429692  T
Q  103 gttataagaggtggtgtactcttactt 129  Q
     ||||||||||||||||||||||||||    
T  7429691 tttataagaggtggtgtactcttactt 7429665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 34297226 - 34297357
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttactt-gtc 99  Q
    ||||||||||||||||||||||||| |||||||||||| |  | ||||||||||||||||||||| ||||||  ||||||||||||| |||||||| |||    
T  34297226 tcatcatcgttggtgttgttgttgatgtcgtagttgtagccatcgttggtgattgtttatgtcaggtgttttataagaggtggtgtactcttacttggtc 34297325  T
Q  100 gttgttataagaggtggtgtactcttactttgt 132  Q
    ||| |||||||||||||||||||||||||||||    
T  34297326 gtt-ttataagaggtggtgtactcttactttgt 34297357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 23955981 - 23955856
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| | |||| |||||||| || ||||||||||||| |||||| ||||||    
T  23955981 atcatcgttggtgttgttgttgaagttgtagttgtatctgttgttgatgattgatcatgttagatgtttctataagaggtggtgtactcttacgtgtcgt 23955882  T
Q  102 tgttataagaggtggtgtactcttac 127  Q
      ||||||||||||||||||||||||    
T  23955881 ctttataagaggtggtgtactcttac 23955856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 9622582 - 9622706
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgtt 102  Q
    |||||||||||| |||| |||||| ||||||||||||| |||||||||||||| | |||| |||||||||  ||||||||||||| |||||||||| |||    
T  9622582 atcatcgttggttttgtggttgaattcgtagttgtatccgttgttggtgattgatcatgttagatgttttataagaggtggtgtactcttacttgttgtt 9622681  T
Q  103 gttataagaggtggtgtactcttac 127  Q
     ||||||||||||||||||||||||    
T  9622682 tttataagaggtggtgtactcttac 9622706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 14594409 - 14594533
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgtt 102  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||| |||||||||  |||||||| |||| |||||| ||||||     
T  14594409 atcatcgttggtgttgttgttgaagtagtagttgtatccgttgttggtgattgatcatgttagatgttttataagaggtgatgtactcttacgtgtcgtc 14594508  T
Q  103 gttataagaggtggtgtactcttac 127  Q
     ||||||||||||||||||||||||    
T  14594509 tttataagaggtggtgtactcttac 14594533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 34297677 - 34297809
Alignment:
Q  104 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 203  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||  | ||||||||||||||  ||| |||| |||| ||||    
T  34297677 ttataagaggtggcgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttatagtgttgaatgaaaggctgttttgatgttac 34297776  T
Q  204 atgaggttacctatgagttgttaaatgtacttg 236  Q
    |||| |||| |||||||||||||||||||||||    
T  34297777 atgatgttatctatgagttgttaaatgtacttg 34297809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 104 - 237
Target Start/End: Complemental strand, 25738066 - 25737933
Alignment:
Q  104 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 203  Q
    ||||||||| || ||||||||||| ||| |||||||||||| ||||||||||||||||||||  | ||||||||||| || |||||| ||||||| ||||    
T  25738066 ttataagagatgatgtactcttacgttggttatgttgatgattatgacgaggttatgatgattgtttatagtgttgagtgtgaggtttttatgatgttac 25737967  T
Q  204 atgaggttacctatgagttgttaaatgtacttga 237  Q
    |||| |||| |||||||||| |||||||||||||    
T  25737966 atgatgttatctatgagttggtaaatgtacttga 25737933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 25738318 - 25738205
Alignment:
Q  13 gtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataaga 111  Q
    ||||||| ||||| |||||||||||| | ||||||||||||||||| |||||| ||||||  | ||||||||||| |||||| |||||||| ||||||||    
T  25738318 gtgttgtcgttgaggtcgtagttgtagccgttgttggtgattgtttctgtcaggtgttttgtaggaggtggtgtactcttactttgtcgtttttataaga 25738219  T
Q  112 ggtggtgtactctt 125  Q
    ||||||||||||||    
T  25738218 ggtggtgtactctt 25738205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 29417087 - 29417200
Alignment:
Q  13 gtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataaga 111  Q
    |||||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| |||| | ||||||||||    
T  29417087 gtgttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgttg-tgttataaga 29417185  T
Q  112 ggtggtgtactctta 126  Q
    |||||||||||||||    
T  29417186 ggtggtgtactctta 29417200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 23955642 - 23955587
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23955642 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 23955587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 23955709 - 23955654
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23955709 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 23955654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 28708300 - 28708245
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28708300 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 28708245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 7429585 - 7429499
Alignment:
Q  76 agaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatg 160  Q
    |||||||| ||| |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7429585 agaggtggcgtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatg 7429499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 28708489 - 28708374
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||||||  ||||||||||||    
T  28708489 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcgt--ttataagaggtg 28708392  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  28708391 gtgtactcttacgttgtt 28708374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 14594582 - 14594671
Alignment:
Q  76 agaggtggtgtagtcttactt-gtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 163  Q
    |||||||||||| |||||||| || |||||  |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  14594582 agaggtggtgtactcttactttgttgttgtccataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 14594671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 16885503 - 16885621
Alignment:
Q  15 gttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagag 112  Q
    ||||||| |||||| ||||||||| | ||||||||||| |||||||| |||| ||||| | ||||||||||||| |||||| |||| ||| |||||||||    
T  16885503 gttgttgatgaagttgtagttgtagccgttgttggtgaatgtttatgttcagttgtttgt-aagaggtggtgtactcttacgttgttgtt-ttataagag 16885600  T
Q  113 gtggtgtactcttactttgtt 133  Q
    ||||||||||||||| |||||    
T  16885601 gtggtgtactcttacgttgtt 16885621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 18927735 - 18927623
Alignment:
Q  21 gttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtg 118  Q
    |||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  |||||||||||||||    
T  18927735 gttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtggtg 18927638  T
Q  119 tactcttactttgtt 133  Q
    ||||||||| |||||    
T  18927637 tactcttacgttgtt 18927623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 28708131 - 28708076
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  28708131 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 28708076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 17378078 - 17378190
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||  ||||||||||||| |||||| ||||  || || |||||||||    
T  17378078 gttgttgaagtcgtagttgaagctgttattggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttacgttgttattctt-taagaggtg 17378176  T
Q  116 gtgtactcttactt 129  Q
    ||||||||||||||    
T  17378177 gtgtactcttactt 17378190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 7429686 - 7429634
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  7429686 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttac 7429634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 15817890 - 15818009
Alignment:
Q  13 gtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgttg--ttataag 110  Q
    |||||||||||||||||||||||| | ||||||||||||| || ||| ||| | |||||   |||||||||||||  |||||  |||||||  |||||||    
T  15817890 gtgttgttgttgaagtcgtagttgaagctgttgttggtgactgattacgtc-gttgtttcataagaggtggtgtacgcttac--gtcgttgttttataag 15817986  T
Q  111 aggtggtgtactcttactttgtt 133  Q
    ||||||||||||||||| |||||    
T  15817987 aggtggtgtactcttacgttgtt 15818009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 7429653 - 7429598
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  7429653 aagaggtggtgtactcttacgtgtcgtttttataagaggtggtgtactcttacttt 7429598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 14594514 - 14594569
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  14594514 aagaggtggtgtactcttacgtgtcgtttttataagaggtggtgtactcttacttt 14594569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 15174379 - 15174488
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||    ||| |||| || |||||| |||| ||| ||||||||||||    
T  15174379 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcagatgttttgtgggagatggtatactcttacgttgttgtt-ttataagaggtg 15174477  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  15174478 gtgtactctta 15174488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 23955842 - 23955788
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  23955842 aagaggtggtgtactcttacttgtcgcttttataagaggtggtgtactcttactt 23955788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 23955809 - 23955756
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  23955809 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 23955756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 9622720 - 9622775
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||    
T  9622720 aagaggtggtgtacttttacatgtcgtttttataagaggtggtgtactcttacttt 9622775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 17378169 - 17378225
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  17378169 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 17378225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 18913564 - 18913508
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  18913564 aagaggtggtgtaatcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 18913508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 28104184 - 28104288
Alignment:
Q  22 ttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgt 119  Q
    ||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   || ||||||||| |||||| |||| ||  ||||||||||||||||    
T  28104184 ttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagtggtggtgtactcttacgttgttgt--ttataagaggtggtgt 28104281  T
Q  120 actctta 126  Q
    |||||||    
T  28104282 actctta 28104288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 23955875 - 23955821
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  23955875 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 23955821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 34297371 - 34297428
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  34297371 aagaggtggtgtactcttacttggtcgtt-ttataagaggtggtgtactcttactttgt 34297428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 9622678 - 9622739
Alignment:
Q  67 tgttttta-aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    |||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||    
T  9622678 tgtttttataagaggtggtgtactcttacgtgtcgtttttataagaggtggtgtacttttac 9622739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 15875223 - 15875115
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgttgt--tataagaggtg 115  Q
    ||||||||||||||||||| | |||||||||||||||||||| || |  | || |  ||||||| ||||| ||||||  ||||||||  |||||||||||    
T  15875223 gttgttgaagtcgtagttgaagctgttgttggtgattgtttacgtta-ttattctataagaggtagtgtactcttac--gtcgttgttgtataagaggtg 15875127  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  15875126 gtgtactcttac 15875115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 28708366 - 28708313
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  ||||||||||| |||||||||||||    
T  28708366 aagaggtggtgtactcttacttgtcgtctttataagaggtagtgtactcttact 28708313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 34297477 - 34297533
Alignment:
Q  76 agaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  34297477 agaggtggtgtactcttacttggtcgtt-ttataagaggtggtgtactcttactttgt 34297533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 18913628 - 18913572
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||||||||||||| |||||    
T  18913628 aagaggtggtgtactcttatttgtcgtt--tataagaggtggtgtactcttacattgtt 18913572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 20182553 - 20182494
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgtt-ataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||    
T  20182553 aagaggtggtgtactcttacgttgtcgttgtttataagaggtggtgtactcttacattgt 20182494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 22153438 - 22153497
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgtt-ataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||    
T  22153438 aagaggtggtgtactcttacgttgtcgttgtttataagaggtggtgtactcttacattgt 22153497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 23955776 - 23955721
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||| || ||  |||||||||||||||||||||||||||    
T  23955776 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttacttt 23955721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 18913693 - 18913636
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||| ||||||||||||  |||||||||| |||||    
T  18913693 aagaggtggtgtactcttacttgtcgtt-ttataagaggtgacgtactcttacgttgtt 18913636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 28708164 - 28708110
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| |||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  28708164 aagaggcggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 28708110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 18913784 - 18913672
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||| ||| | |||||| |||||| |||||||| |||| ||||||   ||||||| |||| |||||| ||||  || || |||||||||    
T  18913784 gttgttgaagtcgtacttgaagctgttgctggtgactgtttatgttcaggtgttttgtgagaggtgttgtactcttacgttgttattctt-taagaggtg 18913686  T
Q  116 gtgtactcttactt 129  Q
    ||||||||||||||    
T  18913685 gtgtactcttactt 18913672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 20182626 - 20182566
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||||| || ||||||||||||||||||| |||||    
T  20182626 aagaggtggtgtactcttacgttgtcgttgtttattagaggtggtgtactcttacgttgtt 20182566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 22153365 - 22153425
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||||| || ||||||||||||||||||| |||||    
T  22153365 aagaggtggtgtactcttacgttgtcgttgtttattagaggtggtgtactcttacgttgtt 22153425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 28708197 - 28708145
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||   ||||||||| |||||||||||||    
T  28708197 aagaggtggtgtactcttacttgtcgtgtctataagaggcggtgtactcttac 28708145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 9622753 - 9622812
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || ||||||||||||||||||||| |||||    
T  9622753 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttaccttgtt 9622812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 20182518 - 20182460
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||| | ||||||||||||||||||||||| |||||    
T  20182518 aagaggtggtgtactcttacattgtcgt-gctataagaggtggtgtactcttacgttgtt 20182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 22153473 - 22153531
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||| | ||||||||||||||||||||||| |||||    
T  22153473 aagaggtggtgtactcttacattgtcgt-gctataagaggtggtgtactcttacgttgtt 22153531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 34297616 - 34297674
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||| |||||    
T  34297616 aagaggtggtgtactcttacttggtcgtt-ttataagagatggtgtactcttacgttgtt 34297674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 18937042 - 18936933
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||| ||| | |||||| |||||| |||||||| |||| ||||||   ||||||| |||| |||||| ||||  || || |||||||||    
T  18937042 gttgttgaagtcgtacttgaagctgttgctggtgactgtttatgttcaggtgttttgtgagaggtgttgtactcttacgttgttattctt-taagaggtg 18936944  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  18936943 gtgtactctta 18936933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 19953347 - 19953404
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||||||  |||||||||||||||||||||||| ||||    
T  19953347 aagaggtggtgtactcttacgttgtcgtc-ttataagaggtggtgtactcttacgttgt 19953404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 22420865 - 22420808
Alignment:
Q  76 agaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||||||| |||||| |||||||  |||||||||||||||||||||||| |||||    
T  22420865 agaggtggtgtactcttacgttgtcgta-ttataagaggtggtgtactcttacgttgtt 22420808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 23400757 - 23400719
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  23400757 attacatgatgttatctatgagttgttaaatgtacttga 23400719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 18927549 - 18927493
Alignment:
Q  76 agaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||| |||||| |||| ||| |||||||||||||||||||||||| ||||    
T  18927549 agaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttacgttgt 18927493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 23955609 - 23955552
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttg 131  Q
    ||||||||||||| ||||||||  | ||| || |||||||||||||||||||||||||    
T  23955609 aagaggtggtgtactcttactttattgtttttctaagaggtggtgtactcttactttg 23955552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 25738197 - 25738168
Alignment:
Q  104 ttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||||||||||||||||||||    
T  25738197 ttataagaggtggtgtactcttactttgtt 25738168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 34297547 - 34297602
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||   |||||| |||||||||||||||||||||||||||||    
T  34297547 aagaggtggtgtactcttagg-gtcgtt-ttataagaggtggtgtactcttactttgt 34297602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 22420833 - 22420782
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactctta 126  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  22420833 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactctta 22420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 34297404 - 34297462
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt---ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||| |||||| ||   ||||||||||||||||||||||||    
T  34297404 aagaggtggtgtactcttactttgtcgttttttttataagaggtggtgtactcttactt 34297462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 7e-67; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 37839065 - 37839229
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839065 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 37839164  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  37839165 agtgttgaatgcgaggttgttatgatattacacgaggttacctacaagttgttaaatgtacttga 37839229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 42597794 - 42597958
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42597794 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttatat 42597893  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    | ||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  42597894 aatgttgaatgagaggttgttatgatattacaagaggttacctaaaagttgttaaatgtacttga 42597958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 28385027 - 28384892
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||| | |||||||||||||||    
T  28385027 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgatgttatgatgatcttttatgatgttgaatgtggggttgttatgatatt 28384928  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  28384927 acatgaggttacctatgagttgttaaatgtacttga 28384892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 28385362 - 28385235
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || |||||||| || ||||||||||||| |||||| |||| |    
T  28385362 atcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgatcaggttagatgtttctataagaggtggtgtactcttacgtgtcat 28385263  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      ||||||||||||||||||||||||||    
T  28385262 ctttataagaggtggtgtactcttactt 28385235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4831706 - 4831838
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||  |||||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| ||||     
T  4831706 tcatcatcgtccgtgttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgtt 4831805  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    | |||||||||||||||||||||||||| |||||    
T  4831806 g-tgttataagaggtggtgtactcttacgttgtt 4831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4835001 - 4835133
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||  |||||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| ||||     
T  4835001 tcatcatcgtccgtgttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgtt 4835100  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    | |||||||||||||||||||||||||| |||||    
T  4835101 g-tgttataagaggtggtgtactcttacgttgtt 4835133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 37838876 - 37838984
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttg-ttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||  ||||||| ||||| ||||||  ||||||| ||||||||||||    
T  37838876 gttgttgaagtcgtagttgaagctgttgttggtgattgtttatgttcaggtgttttctaagaggtagtgtactcttac--gtcgttgtttataagaggtg 37838973  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  37838974 gtgtactctta 37838984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 42597605 - 42597713
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttg-ttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||  ||||||| ||||| ||||||  ||||||| ||||||||||||    
T  42597605 gttgttgaagtcgtagttgaagctgttgttggtgattgtttatgttcaggtgttttctaagaggtagtgtactcttac--gtcgttgtttataagaggtg 42597702  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  42597703 gtgtactctta 42597713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 30146337 - 30146216
Alignment:
Q  15 gttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttg--ttataaga 111  Q
    |||||||||||||||||||||||| | ||||||||||| || ||||||||  |||| |  ||||||| ||||| |||||| |||| ||||  ||||||||    
T  30146337 gttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaagtgttgtgtaagaggtagtgtactcttactttgttgttgttttataaga 30146238  T
Q  112 ggtggtgtactcttactttgtt 133  Q
    |||||||||||||||| |||||    
T  30146237 ggtggtgtactcttacgttgtt 30146216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 9923208 - 9923096
Alignment:
Q  21 gttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtg 118  Q
    |||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  |||||||||||||||    
T  9923208 gttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtggtg 9923111  T
Q  119 tactcttactttgtt 133  Q
    ||||||||| |||||    
T  9923110 tactcttacgttgtt 9923096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 28385124 - 28385069
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  28385124 aagaggtggtgtactcttagttgtcgttgttataagaggtggagtactcttacttt 28385069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 37838999 - 37839053
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  37838999 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttacttt 37839053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 42597728 - 42597782
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  42597728 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttacttt 42597782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 15497473 - 15497530
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  15497473 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttacgttgtt 15497530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 28385256 - 28385202
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  28385256 aagaggtggtgtactcttacttgtcgtttttataagagggggtgtactcttactt 28385202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 11479651 - 11479757
Alignment:
Q  21 gttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtg 118  Q
    |||||||||||||||| | ||||||||||||| |||||||| || | ||||||   |||||||||||| |||||| |||| ||  |||||||||||||||    
T  11479651 gttgaagtcgtagttgaagctgttgttggtgactgtttatgttctggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtggtg 11479748  T
Q  119 tactcttac 127  Q
    |||||||||    
T  11479749 tactcttac 11479757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 14747020 - 14747076
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  14747020 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 14747076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 15481673 - 15481729
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  15481673 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 15481729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 26013321 - 26013213
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||| ||||| | ||||||||||| | |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  ||||||||||||    
T  26013321 gttgttgaagtcggagttgaagctgttgttggtaactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtg 26013224  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  26013223 gtgtactctta 26013213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 40619665 - 40619555
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||| ||||||||||||| | ||||||||||||| |||||||| |||||||||||    |||||||| || |||||| |||| ||| ||||| ||||||    
T  40619665 gttgtcgaagtcgtagttgaagctgttgttggtgactgtttatgttcagatgttttgtgggaggtggtttactcttacgttgttgtt-ttatacgaggtg 40619567  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  40619566 gtgtactcttac 40619555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 54605093 - 54605041
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  54605093 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttactt 54605041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 28385190 - 28385137
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    |||||| |||||| |||||||||||||  |||||||||||||||||||||||||    
T  28385190 aagaggcggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 28385137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 14747148 - 14747204
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  14747148 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacgttgtt 14747204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 37839031 - 37839090
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  37839031 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 37839090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 42597760 - 42597819
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  42597760 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 42597819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 54605157 - 54605101
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| | ||||||||||||  ||||||||||||||||||||||| |||||    
T  54605157 aagaggtggtgtactattacttgtcgtt--tataagaggtggtgtactcttacgttgtt 54605101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 15480886 - 15480943
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||| |||| |||||||||||||| ||||||| |||||||||||||||| |||||    
T  15480886 aagaggtgttgtactcttacttgtcgtt-ttataaggggtggtgtactcttacgttgtt 15480943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 15884430 - 15884485
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||||||| ||||||||||    
T  15884430 aagaggtggtgtactcttatttgtcgtt--tataagaggtggtgtacgcttactttgt 15884485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 28385223 - 28385169
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| |||||| |||||||||||| | |||||||||| |||||||||||||||    
T  28385223 aagagggggtgtactcttacttgtcgcttttataagaggcggtgtactcttactt 28385169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 14746864 - 14746980
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    |||||| |||||||||||| | ||||| || |||| ||||||||| ||  ||||||  ||||||||||||| |||||| ||||  || || |||||||||    
T  14746864 gttgttaaagtcgtagttgaagctgttattagtgactgtttatgttcatgtgttttgtaagaggtggtgtactcttacgttgttattctt-taagaggtg 14746962  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  14746963 gtgtactcttacgttgtt 14746980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 15497532 - 15497588
Alignment:
Q  69 tttttaaagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactctta 126  Q
    ||||| ||||||||||||| || ||||||||||| | |||||||||||||||||||||    
T  15497532 ttttttaagaggtggtgtactcatacttgtcgtt-taataagaggtggtgtactctta 15497588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 15884624 - 15884672
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactct 124  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  15884624 aagaggtggtgtactcttacttgttgtt-ttataagaggtggtgtactct 15884672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 14747084 - 14747140
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||||| || ||||||||||||||  |||||||||| |||||||||||| |||||    
T  14747084 aagaggtggtttactcttacttgtcgtt--tataagaggtagtgtactcttacgttgtt 14747140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 15497603 - 15497659
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||| ||||||||  |||| |||||||||||||||||| |||||    
T  15497603 aagaggtggtgtactcttatttgtcgtt--tatatgaggtggtgtactcttacgttgtt 15497659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 21102755 - 21102811
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||| ||| ||||| |||||    
T  21102755 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtatacccttacgttgtt 21102811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 28385157 - 28385106
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactctta 126  Q
    ||||||||||||| ||||||| || ||  |||||||||||||||||||||||    
T  28385157 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactctta 28385106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 631747 - 631785
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  631747 attacatgatgttatctatgagttgttaaatgtacttga 631785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 4831813 - 4831874
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| ||||||  |||||||||||||||||||||| |||||    
T  4831813 aagaggtggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 4831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 4835108 - 4835169
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| ||||||  |||||||||||||||||||||| |||||    
T  4835108 aagaggtggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 4835169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 9923088 - 9923031
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| ||||    
T  9923088 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttacgttgt 9923031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 12423022 - 12422984
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  12423022 attacatgatgttatctatgagttgttaaatgtacttga 12422984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 13813832 - 13813870
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13813832 attacatgatgttatctatgagttgttaaatgtacttga 13813870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 13818320 - 13818358
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13818320 attacatgatgttatctatgagttgttaaatgtacttga 13818358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 15008065 - 15008007
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  |||||||||  |||||||||||||||||||||| |||||    
T  15008065 aagaggtggtgtactcttac--gtcgttgtttcataagaggtggtgtactcttacgttgtt 15008007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 15884339 - 15884448
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||| ||||| |||||| | |||| ||||||   ||| |||||||| |||||| ||||  || || |||||||||    
T  15884339 gttgttgaagtcgtagttgaagctgttgtaggtgactgtttacgttcaggtgttttatgagacgtggtgtactcttacgttgttattctt-taagaggtg 15884437  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  15884438 gtgtactctta 15884448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 17052445 - 17052483
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  17052445 attacatgatgttatctatgagttgttaaatgtacttga 17052483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 22634926 - 22634964
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  22634926 attacatgatgttatctatgagttgttaaatgtacttga 22634964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 23996966 - 23997004
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  23996966 attacatgatgttatctatgagttgttaaatgtacttga 23997004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 24048384 - 24048422
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24048384 attacatgatgttatctatgagttgttaaatgtacttga 24048422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 37838966 - 37839020
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||    
T  37838966 aagaggtggtgtactctta--tgtcgttgttctataagaggtggtgtactcttactt 37839020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 42597695 - 42597749
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||    
T  42597695 aagaggtggtgtactctta--tgtcgttgttctataagaggtggtgtactcttactt 42597749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 15497318 - 15497387
Alignment:
Q  19 ttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgta 87  Q
    |||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   ||||||||||||    
T  15497318 ttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgta 15497387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 49548998 - 49549055
Alignment:
Q  150 acgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatga 207  Q
    |||| |||||||||||  | |||||||||||||  |||||||||||||| ||||||||    
T  49548998 acgaagttatgatgattgtttatagtgttgaatatgaggttgttatgatgttacatga 49549055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 14746955 - 14747012
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  || |||||| |||||||||||||||||||||| |||||    
T  14746955 aagaggtggtgtactcttac--gttgttgtttataagaggtggtgtactcttacgttgtt 14747012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 15480945 - 15481008
Alignment:
Q  69 tttttaaagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||| ||||||||||||  |||||||||| ||| |||||||||||  ||||||||||| |||||    
T  15480945 tttttgaagaggtggtgtgctcttacttgttgtt-ttataagaggttatgtactcttacgttgtt 15481008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 82)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 44494097 - 44494261
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||  |||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44494097 aagaggtggtgtgctcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctat 44494196  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  44494197 agtgttgaatgtgaggttgttatgatattacatgatgttacctatgaattgttaaatgtacttga 44494261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 21967866 - 21968030
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  21967866 aagaggtggtgtactcttactttgttgttgtttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttat 21967965  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21967966 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttga 21968030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 21980706 - 21980870
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||    
T  21980706 aagaggtggtgtactcttactttgttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgattttttat 21980805  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21980806 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttga 21980870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 21985689 - 21985853
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||    
T  21985689 aagaggtggtgtactcttactttgttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatattttat 21985788  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21985789 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttga 21985853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 22009070 - 22009234
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  22009070 aagaggtggtgtactcttactttgttgttatctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttat 22009169  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22009170 agggttgaatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttga 22009234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 34950259 - 34950127
Alignment:
Q  105 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattaca 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  34950259 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttatatagtgttgaatgtgaggttgttctgatattaca 34950160  T
Q  205 tgaggttacctatgagttgttaaatgtacttga 237  Q
    ||| |||||||||||||||||||||||||||||    
T  34950159 tgatgttacctatgagttgttaaatgtacttga 34950127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 8414879 - 8415014
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||| |||| | |||||||||||||||    
T  8414879 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttaaatgtggggttgttatgatatt 8414978  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  8414979 acatgaggttacctatgagttgttaaatgtacttga 8415014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 11774472 - 11774337
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||||||||    
T  11774472 tgttataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatatt 11774373  T
Q  202 acatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||||| ||||||||||||||||||||||    
T  11774372 acatgaggttacccatgagttgttaaatgtacttga 11774337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 21328769 - 21328607
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||  | ||||    
T  21328769 aagaggtggtgtactcttactttgtcgtt-ttataagaggtggtgtactcttacgttttttatgttgatgattatgacgatgttatgatgattgtttata 21328671  T
Q  174 gtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |||||||||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  21328670 gtgttgaatgtgaggttgttatgatgttacatgatgttatctatgagttgttaaatgtacttga 21328607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 22000657 - 22000816
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||    
T  22000657 aagaggtggtgtactcttactttgttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgactaggttatgatgatcttttat 22000756  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    |     | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22000757 a-----ggatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttga 22000816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 11251961 - 11252120
Alignment:
Q  75 aagaggtggtgtagtcttact-tgtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| ||||||  ||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  11251961 aagaggtggtgtactcttaccctgttgttgtctatgagaggtggtgtactcttacgtggtttatgttgatgagtatgacgaggttatgatgatcttctat 11252060  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||||| ||||| ||||||||||     || |||||||||||||||||||||||||||||    
T  11252061 agtgttgaatgtgaggtggttatgatat-----gatgttacctatgagttgttaaatgtacttga 11252120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21980463 - 21980593
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttac-ttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||    
T  21980463 tcatcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgtttatgttagatgtttttataagaggtggtgtactcttactttgt 21980562  T
Q  99 cgttgttataagaggtggtgtactcttactt 129  Q
    ||   ||||||||||||||||||||||||||    
T  21980563 cggctttataagaggtggtgtactcttactt 21980593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 22005460 - 22005590
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttac-ttgt 98  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||    
T  22005460 tcatcatcattggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgtttatgttagatgtttttataagaggtggtgtactcttactttgt 22005559  T
Q  99 cgttgttataagaggtggtgtactcttactt 129  Q
    |||  ||||||||||||||||||||||||||    
T  22005560 cgtctttataagaggtggtgtactcttactt 22005590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16197826 - 16197694
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||| ||||||  ||||||||||||| |||||| |||||    
T  16197826 tcatcatcgttggtgtcgttgttgaagtcgtagctgtagccgttgttggtgattgtttatgtcaggtgttttataagaggtggtgtactcttactttgtc 16197727  T
Q  100 gttgttataagaggtggtgtactcttactttgt 132  Q
    ||| |||||||||||||||||||||||||||||    
T  16197726 gtttttataagaggtggtgtactcttactttgt 16197694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21985446 - 21985576
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttac-ttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||    
T  21985446 tcatcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgtttatgttagatgtttttataagaggtggtgtactcttactttgt 21985545  T
Q  99 cgttgttataagaggtggtgtactcttactt 129  Q
    ||   |||||||||| |||||||||||||||    
T  21985546 cggctttataagaggaggtgtactcttactt 21985576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 22000482 - 22000611
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttac-ttgt 98  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||    
T  22000482 tcatcatcgttggtgttgttgttgaagtcgtagtt-tatccgttgttggtgattgtttatgttagatgtttttataagaggtggtgtactcttactttgt 22000580  T
Q  99 cgttgttataagaggtggtgtactcttactt 129  Q
    |||  ||||||||||||||||||||||||||    
T  22000581 cgtctttataagaggtggtgtactcttactt 22000611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 21328978 - 21328849
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| | ||||  ||||||| ||||| |||||| |||||    
T  21328978 tcatcatcgttggtgttgttgttgaagtcgtagttgtagccgttgttggtgattgtttatgtcaggtattttataagaggttgtgtactcttactttgtc 21328879  T
Q  100 gttgttataagaggtggtgtactcttactt 129  Q
    ||| ||||||||||||||||||||||||||    
T  21328878 gtttttataagaggtggtgtactcttactt 21328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 11251823 - 11251950
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||| | | || ||||||||||| ||||||||||||| |||||||||||||    
T  11251823 atcatcgttggtgttgttgttgaagtcgtagtagtatccgttgttggtgattgatcaggttagatgtttttataagaggtggtgtactcttacttgtcgt 11251922  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
    | |||||||||||| |||||||||||||    
T  11251923 ttttataagaggtgatgtactcttactt 11251950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 42560484 - 42560615
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcg 100  Q
    ||||||||||||||||||||||||| |||||||||||| |  | ||||||||||||||||||||| ||||||  |||||||||| || ||||||||||||    
T  42560484 tcatcatcgttggtgttgttgttgatgtcgtagttgtagccatcgttggtgattgtttatgtcaggtgttttataagaggtggtttactcttacttgtcg 42560583  T
Q  101 ttgttataagaggtggtgtactcttactttgt 132  Q
    || ||||||||||| |||||||||||||||||    
T  42560584 tttttataagaggttgtgtactcttactttgt 42560615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 44493858 - 44493985
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttt-aaagaggtggtgtagtcttacttgtcgt 101  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| | |||||||||||||||  ||||||||||||| |||||| ||||||    
T  44493858 atcatcgttggtgttgttgttgaagtcgtagttgtgtccgttgttggtgattgatcatgtcagatgtttttgtaagaggtggtgtactcttacgtgtcgt 44493957  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      ||||||||||||||||||||||||||    
T  44493958 ctttataagaggtggtgtactcttactt 44493985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 34950495 - 34950370
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| | |||| ||||||||||| ||||||||||||| |||||| ||||||    
T  34950495 atcatcgttggtgttgttgttgaattcgtagttgtatccgttgttggtgattgatcatgttagatgtttttataagaggtggtgtactcttacgtgtcgt 34950396  T
Q  102 tgttataagaggtggtgtactcttac 127  Q
    | |||||||| |||||||||||||||    
T  34950395 ttttataagatgtggtgtactcttac 34950370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 8414643 - 8414769
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||| | | || |||||||| || |||||| |||||| |||||||||||||    
T  8414643 atcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttagtgattgatcaggttagatgtttctataagagggggtgtactcttacttgtcgt 8414742  T
Q  102 tgttataagaggtggtgtactcttact 128  Q
    | |||||||||||||||||||||||||    
T  8414743 ttttataagaggtggtgtactcttact 8414769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 42560786 - 42560915
Alignment:
Q  104 ttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattac 203  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||  | |||||||||||||| |||| |||| |||| ||||    
T  42560786 ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgctatgatgattgtttatagtgttgaatgagaggctgttttgatgttac 42560885  T
Q  204 atgaggttacctatgagttgttaaatgtac 233  Q
    |||| |||| ||||||||||||||||||||    
T  42560886 atgatgttatctatgagttgttaaatgtac 42560915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 11774841 - 11774714
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| | |||| |||||||| || ||||||||||||| |||||| ||||||    
T  11774841 atcatcgttggtgttgttgttgaagttgtagttgtatctgttgttgatgattgatcatgttagatgtttctataagaggtggtgtactcttacgtgtcgt 11774742  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      |||||||||||| |||||||||||||    
T  11774741 ctttataagaggtgatgtactcttactt 11774714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 22352785 - 22352673
Alignment:
Q  14 tgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataaga 111  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||  ||||| |||||||||||||| |||| ||  ||||||||    
T  22352785 tgttgttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcagttgttttataagagatggtgtagtcttacgttgttgt--ttataaga 22352688  T
Q  112 ggtggtgtactctta 126  Q
    |||||||||||||||    
T  22352687 ggtggtgtactctta 22352673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 8414782 - 8414837
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8414782 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 8414837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 11774569 - 11774514
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11774569 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 11774514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 11774636 - 11774581
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11774636 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 11774581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 21328870 - 21328813
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  21328870 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttactttgt 21328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 21980572 - 21980627
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  21980572 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 21980627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 18024679 - 18024786
Alignment:
Q  26 agtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactc 123  Q
    ||||||||||| | ||||||||||||| ||||||||| ||| ||||| | ||||||||||||| |||||| |||| ||| ||||||||||||||||||||    
T  18024679 agtcgtagttgaagctgttgttggtgactgtttatgtccaggtgtttgt-aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactc 18024776  T
Q  124 ttactttgtt 133  Q
    |||| |||||    
T  18024777 ttacgttgtt 18024786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 14103283 - 14103390
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||| ||||||||||||    
T  14103283 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ttataagaggtg 14103381  T
Q  116 gtgtactct 124  Q
    |||| ||||    
T  14103382 gtgtgctct 14103390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 44493964 - 44494016
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  44493964 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttac 44494016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 21967799 - 21967854
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  21967799 aagaggtggtgtactcttacttgtcgtttttataagaggaggtgtactcttacttt 21967854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 21980639 - 21980694
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  21980639 aagaggtggtgtactcttacttgtcgtttttataagaggaggtgtactcttacttt 21980694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 21985622 - 21985677
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  21985622 aagaggtggtgtactcttacttgtcgtttttataagaggaggtgtactcttacttt 21985677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 22000590 - 22000645
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  22000590 aagaggtggtgtactcttacttgtcgtttttataagaggaggtgtactcttacttt 22000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 22009003 - 22009058
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  22009003 aagaggtggtgtactcttacttgtcgtttttataagaggaggtgtactcttacttt 22009058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 23409635 - 23409527
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||| ||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  ||||||||||||    
T  23409635 gttgttgaagtcggagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtg 23409538  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  23409537 gtgtactctta 23409527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 44494030 - 44494085
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  44494030 aagaggtggtgtactcttacttgtcgtttttataagaggtcgtgtactcttacttt 44494085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 21328803 - 21328745
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  21328803 aagaggtggtgtactcttactttgtcgtttttataagaggtggtgtactcttactttgt 21328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 22005569 - 22005619
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactctt 125  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  22005569 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactctt 22005619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 11774702 - 11774649
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  11774702 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 11774649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 21985555 - 21985610
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    |||||| |||||| ||||||||||| || |||||||||||||||||||||||||||    
T  21985555 aagaggaggtgtactcttacttgtcatttttataagaggtggtgtactcttacttt 21985610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 34950324 - 34950269
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||||| ||||    
T  34950324 aagaggtggtgcactcttacttgtcgtttttataagaggtggtgtactctttcttt 34950269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 11774735 - 11774681
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||||| |||| |||||||||||| | ||||||||||||||||||||||||||    
T  11774735 aagaggtgatgtactcttacttgtcgcttttataagaggtggtgtactcttactt 11774681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 21328837 - 21328779
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||||    
T  21328837 aagaggtggtgtactcttactttgtcgtctttataagaggtggtgtactcttactttgt 21328779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 44493997 - 44494051
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  44493997 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 44494051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 16197718 - 16197664
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  16197718 aagaggtggtgtactcttactttgtcgtt-ttataagaggtggtgtactcttactt 16197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 19879542 - 19879486
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||| |||||| |||||    
T  19879542 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtagtcttacgttgtt 19879486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 19879672 - 19879614
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||    
T  19879672 aagaggtggtgtactcttacgttgtcgtt-ttataagaggtggtgtactcttacgttgtt 19879614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 21967832 - 21967891
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||| |||||| ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  21967832 aagaggaggtgtactcttactttatcgtttttataagaggtggtgtactcttactttgtt 21967891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 21980605 - 21980660
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||    
T  21980605 aagaggtggtgtactcttactttatcgtttttataagaggtggtgtactcttactt 21980660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 21980672 - 21980731
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||| |||||| ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  21980672 aagaggaggtgtactcttactttatcgtttttataagaggtggtgtactcttactttgtt 21980731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 21985588 - 21985643
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||    
T  21985588 aagaggtggtgtactcttactttatcgtttttataagaggtggtgtactcttactt 21985643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 21985655 - 21985714
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||| |||||| ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  21985655 aagaggaggtgtactcttactttatcgtttttataagaggtggtgtactcttactttgtt 21985714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 22000623 - 22000682
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||| |||||| ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  22000623 aagaggaggtgtactcttactttatcgtttttataagaggtggtgtactcttactttgtt 22000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 22009036 - 22009095
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||| |||||| ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  22009036 aagaggaggtgtactcttactttatcgtttttataagaggtggtgtactcttactttgtt 22009095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 8414749 - 8414803
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||| || ||  ||||||||||||||||||||||||||    
T  8414749 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttactt 8414803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 11774669 - 11774615
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||| || ||  ||||||||||||||||||||||||||    
T  11774669 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttactt 11774615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 12576867 - 12576810
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||||||| ||||    
T  12576867 aagaggtggtgtactcttacgttgtcgtt-ttataagaggtggtgtactcttacgttgt 12576810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 34950357 - 34950303
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||| ||||||||||    
T  34950357 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgcactcttactt 34950303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 19879606 - 19879556
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  19879606 aagaggtggtgtactcttatttgtcgtt--tataagaggtggtgtactcttac 19879556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 23478208 - 23478100
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgttg--ttataagaggtg 115  Q
    |||||||||| |||||||| | ||||||||||||| |||||| ||  | ||||||  ||||||||||| | ||||||  |||||||  | ||||||||||    
T  23478208 gttgttgaagccgtagttgaagctgttgttggtgactgtttaagt-tgttgttttataagaggtggtggactcttac--gtcgttgcttcataagaggtg 23478112  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  23478111 gtgtactcttac 23478100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 11251929 - 11251980
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    |||||||| |||| |||||||||||||| || |||||||||||||||||||||    
T  11251929 aagaggtgatgtactcttacttgtcgtt-ttctaagaggtggtgtactcttac 11251980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 19879770 - 19879713
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  19879770 aagaggtggtgtactcttacgttgtcgtt--tataagaggtggtgtactcttacgttgtt 19879713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 21967740 - 21967776
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtat 39  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21967740 atcatcgctggtgttgttgttgaagtcgtagttgtat 21967776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 34950389 - 34950338
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    |||| |||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  34950389 aagatgtggtgtactcttacgtgtcgtt-ttataagaggtggtgtactcttac 34950338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 17461345 - 17461431
Alignment:
Q  41 tgttgttggtgattgtttatgtc-agatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactctta 126  Q
    |||||||||||| |||||||||| || ||||||   ||||||| |||| |||||| |||| ||| |||||||||||||||||||||||    
T  17461345 tgttgttggtgactgtttatgtccaggtgttttgtgagaggtgatgtactcttacgttgttgtt-ttataagaggtggtgtactctta 17461431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 42560591 - 42560649
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||| ||||| |||||||| |||||| |||||||||||||||||||||||| |||||    
T  42560591 aagaggttgtgtactcttactttgtcgtt-ttataagaggtggtgtactcttacgttgtt 42560649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 19879956 - 19879847
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||| | |  |||||||||||| | |||||| |||||||||||   |||||||||||| |||||| || |  || || |||||||||    
T  19879956 gttgttgaagtcgtagtcgaagttgttgttggtgactatttatgttcagatgttttgtgagaggtggtgtactcttacgttcttattctt-taagaggtg 19879858  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  19879857 gtgtactctta 19879847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 42560656 - 42560709
Alignment:
Q  75 aagaggtggtgtagtcttact-tgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||    
T  42560656 aagaggtggtgtactcttactctgtcgtt-ttataataggtggtgtactcttact 42560709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 44385833 - 44385871
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  44385833 attacatgatgttatctatgagttgttaaatgtacttga 44385871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 8414815 - 8414872
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttg 131  Q
    ||||||||||||| ||||||||  | ||| || |||||||||||||||||||||||||    
T  8414815 aagaggtggtgtactcttactttattgtttttctaagaggtggtgtactcttactttg 8414872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 11774536 - 11774479
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttg 131  Q
    ||||||||||||| ||||||||  | ||| || |||||||||||||||||||||||||    
T  11774536 aagaggtggtgtactcttactttattgtttttctaagaggtggtgtactcttactttg 11774479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 22352561 - 22352509
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| |||||| |||| ||| ||||||||||||||||||||||||    
T  22352561 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttac 22352509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 21980534 - 21980562
Alignment:
Q  104 ttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||||||||||||||||||||    
T  21980534 ttataagaggtggtgtactcttactttgt 21980562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 21985517 - 21985545
Alignment:
Q  104 ttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||||||||||||||||||||    
T  21985517 ttataagaggtggtgtactcttactttgt 21985545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 22000552 - 22000580
Alignment:
Q  104 ttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||||||||||||||||||||    
T  22000552 ttataagaggtggtgtactcttactttgt 22000580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 22005531 - 22005559
Alignment:
Q  104 ttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||||||||||||||||||||    
T  22005531 ttataagaggtggtgtactcttactttgt 22005559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 22352593 - 22352536
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| |||  ||||||||||||||||||||||| |||||    
T  22352593 aagaggtggtgtactcttacattgttgtt--tataagaggtggtgtactcttacgttgtt 22352536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 23427905 - 23427869
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtactt 235  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  23427905 attacatgatgttatctatgagttgttaaatgtactt 23427869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 4e-62; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 37379241 - 37379077
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctat 172  Q
    ||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37379241 aagaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttttat 37379142  T
Q  173 agtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 237  Q
      ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37379141 gatgttgaatgtggggttgttatgatattacatgaggttacctatgagttgttaaatgtacttga 37379077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 22703048 - 22702916
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||  | |||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||||||||||||| |||||| ||||     
T  22703048 tcatcatcgtccgagttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtactcttactttgtt 22702949  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    | ||||||||||||||||||||||||||||||||    
T  22702948 g-tgttataagaggtggtgtactcttactttgtt 22702916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 37379430 - 37379322
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttg-ttataagaggtg 115  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||  ||||||| ||||| ||||||  ||||||| ||||||||||||    
T  37379430 gttgttgaagtcgtagttgaagctgttgttggtgattgtttatgttcaggtgttttctaagaggtagtgtactcttac--gtcgttgtttataagaggtg 37379333  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  37379332 gtgtactctta 37379322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 13101802 - 13101917
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||||||  ||||||||||||    
T  13101802 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgtcgt--ttataagaggtg 13101899  T
Q  116 gtgtactcttactttgtt 133  Q
     ||||||||||| |||||    
T  13101900 atgtactcttacgttgtt 13101917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 24316375 - 24316490
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||| ||||||||||||    
T  24316375 gttgttgaagtcgtagttggagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ttataagaggtg 24316473  T
Q  116 gtgtactcttactttgt 132  Q
    || ||||||||| ||||    
T  24316474 gtatactcttacgttgt 24316490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 24681256 - 24681148
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||  ||||||||||||| |||||| |||| ||  ||||||||||||    
T  24681256 gttgttgaagtcgtagttgaagctgttattggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttacgttgttgt--ttataagaggtg 24681159  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  24681158 gtgtactctta 24681148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 18359108 - 18359229
Alignment:
Q  13 gtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataag 110  Q
    |||||||||||||||||||||||| |  | |||| ||||| ||||||||| ||| || |||   |||||||||||| |||||| |||| ||| |||||||    
T  18359108 gtgttgttgttgaagtcgtagttgaagttcttgtcggtgactgtttatgttcaggtgctttgtgagaggtggtgtactcttacgttgttgtt-ttataag 18359206  T
Q  111 aggtggtgtactcttactttgtt 133  Q
    |||||||||||||||||||||||    
T  18359207 aggtggtgtactcttactttgtt 18359229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 21082016 - 21082126
Alignment:
Q  17 tgttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggt 114  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||| |||||||||||    |||||||| || |||||| |||| ||| |||||||||||    
T  21082016 tgtttttgaagtcgtagttgaagatgttgttggtgattgtttatgttcagatgttttgtgggaggtggtttactcttacgttgttgtt-ttataagaggt 21082114  T
Q  115 ggtgtactctta 126  Q
    ||||||||||||    
T  21082115 ggtgtactctta 21082126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 34874493 - 34874601
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  ||||||| ||||    
T  34874493 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagtggtg 34874590  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  34874591 gtgtactctta 34874601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 37379307 - 37379253
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  37379307 aagaggtggtgtactcttacttgtcgtt-ttataagaggtggtgtactcttacttt 37379253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 34492416 - 34492525
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| ||||  || || |||||||||    
T  34492416 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttattctt-taagaggtg 34492514  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  34492515 gtgtactctta 34492525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 27472259 - 27472145
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   | |||||||||| |||||| |||| ||  || |||||||||    
T  27472259 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgataggtggtgtactcttacgttgttgt--ttgtaagaggtg 27472162  T
Q  116 gtgtactcttactttgt 132  Q
    |||||||||||| ||||    
T  27472161 gtgtactcttacgttgt 27472145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 23707758 - 23707814
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  23707758 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 23707814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 24670680 - 24670624
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  24670680 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 24670624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 24670744 - 24670688
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  24670744 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 24670688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 24917950 - 24917840
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||  ||||||| ||||| |||||| ||||  || || |||||||||    
T  24917950 gttgttgaagtcgtagttgaagctgttattggtgactgtttatgttcaggtgttttgtaagaggttgtgtactcttacgttgttattctt-taagaggtg 24917852  T
Q  116 gtgtactcttac 127  Q
    ||||||||||||    
T  24917851 gtgtactcttac 24917840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 34492635 - 34492691
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  34492635 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 34492691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 23707569 - 23707678
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||| ||||||| |||||||| |||| ||||||  ||||||||||||| |||||| ||||  ||  |||||||||||    
T  23707569 gttgttgaagtcgtagttgaaggtgttattggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttacgttgt-ttttctataagaggtg 23707667  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  23707668 gtgtactctta 23707678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 21914750 - 21914673
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac 94  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| ||||||    
T  21914750 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttac 21914673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22459844 - 22459950
Alignment:
Q  19 ttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtgg 116  Q
    |||||||||| ||||||| | ||||| ||||||| ||||||||| ||| ||||||   |||||||||||| |||||| |||| |||  ||||||||||||    
T  22459844 ttgttgaagtagtagttgaagctgttattggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacattgttgtt--tataagaggtgg 22459941  T
Q  117 tgtactctt 125  Q
    |||||||||    
T  22459942 tgtactctt 22459950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 22702941 - 22702873
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt--ataagaggtggtgtactcttactttgtttatgttg 140  Q
    ||||||||||||| |||||||| || ||||||  |||||||||||||||||||||| ||||||||||||    
T  22702941 aagaggtggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtttatgttg 22702873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24670835 - 24670758
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac 94  Q
    ||||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||  ||||||||||||| ||||||    
T  24670835 gttgttgaagtcgtagttgaagctgttattggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttac 24670758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 23707822 - 23707878
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  23707822 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacgttgtt 23707878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 24681067 - 24681011
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  24681067 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacattgtt 24681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 34492571 - 34492627
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||||||||||||| |||||    
T  34492571 aagaggtggtgtactcttatttgtcgtt--tataagaggtggtgtactcttacgttgtt 34492627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 37379275 - 37379216
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| || |||||||||||||||||||||||||||    
T  37379275 aagaggtggtgtactcttactttatcgtttttctaagaggtggtgtactcttactttgtt 37379216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 24670616 - 24670560
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  ||||| |||||||||||| ||||| |||||    
T  24670616 aagaggtggtgtactcttacttgtcgt--ttataggaggtggtgtacccttacattgtt 24670560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 24917665 - 24917609
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||| ||||||| ||||||||||||||  ||||||||||||||||| ||||| |||||    
T  24917665 aagagatggtgtactcttacttgtcgtt--tataagaggtggtgtacgcttacgttgtt 24917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 27485413 - 27485520
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttg--ttataagaggt 114  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||    |||||| | || ||||||  |||||||  |||||||||||    
T  27485413 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgcgaggtgatttactcttac--gtcgttgttttataagaggt 27485510  T
Q  115 ggtgtactct 124  Q
    ||||||||||    
T  27485511 ggtgtactct 27485520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 34492507 - 34492563
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||| ||||||||| |||||    
T  34492507 aagaggtggtgtactcttatttgtcgtt--tataagaggtggtttactcttacgttgtt 34492563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 34874616 - 34874673
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| ||||    
T  34874616 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttacgttgt 34874673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 37379340 - 37379286
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||    
T  37379340 aagaggtggtgtactctta--tgtcgttgttctataagaggtggtgtactcttactt 37379286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 23707693 - 23707750
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| |||  ||||||||||||||||||||||| |||||    
T  23707693 aagaggtggtgtactcttacgttgtggtt--tataagaggtggtgtactcttacgttgtt 23707750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 24917794 - 24917745
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactctta 126  Q
    |||||||| |||| ||||| ||||||||  ||||||||||||||||||||||    
T  24917794 aagaggtgatgtactcttatttgtcgtt--tataagaggtggtgtactctta 24917745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 107; Significance: 9e-54; HSPs: 7)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 173133 - 173263
Alignment:
Q  107 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatg 206  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||    
T  173133 taagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatagtgttgaatgtgaggttgttatgatattatatg 173232  T
Q  207 aggttacctatgagttgttaaatgtacttga 237  Q
    | ||||||||| |||||||||||||||||||    
T  173233 atgttacctattagttgttaaatgtacttga 173263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 172794 - 172924
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttac-ttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||| |||||| ||||    
T  172794 tcatcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgttcatgttagatgtttttataagaggtggtgtactcttactttgt 172893  T
Q  99 cgttgttataagaggtggtgtactcttactt 129  Q
    ||   ||||||||||||||||||||||||||    
T  172894 cggctttataagaggtggtgtactcttactt 172924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 172903 - 172958
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  172903 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 172958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 173003 - 173058
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  173003 aagaggaggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 173058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 172970 - 173024
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| |||||| |||||||||||||| |||||||||| |||||||||||||||    
T  172970 aagaggcggtgtactcttacttgtcgtttttataagaggaggtgtactcttactt 173024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 173036 - 173095
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| ||  ||||||||||||||||||||||||||    
T  173036 aagaggtggtgtactcttactttatcgtttttccaagaggtggtgtactcttactttgtt 173095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 172865 - 172893
Alignment:
Q  104 ttataagaggtggtgtactcttactttgt 132  Q
    |||||||||||||||||||||||||||||    
T  172865 ttataagaggtggtgtactcttactttgt 172893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 8e-48; HSPs: 28)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 163269 - 163396
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcg 100  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||    
T  163269 tcatcatcgttggtgttgttgttgaagtcgtagttgtgtc-gttgttggtgattgtttatgtcagttgttttataagaggtggtgtactcttacttgtcg 163367  T
Q  101 ttgttataagaggtggtgtactcttactt 129  Q
    || ||||||||||||||||||||||||||    
T  163368 tttttataagaggtggtgtactcttactt 163396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 175542 - 175425
Alignment:
Q  102 tgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatatt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||| | |||||||||||||||    
T  175542 tgttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatatt 175443  T
Q  202 acatgaggttacctatga 219  Q
    ||||||||||||||||||    
T  175442 acatgaggttacctatga 175425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 175911 - 175786
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| | |||| |||||||| || ||||||||||||| |||||| ||||||    
T  175911 atcatcgttggtgttgttgttgaagttgtagttgtatctgttgttgatgattgatcatgttagatgtttctataagaggtggtgtactcttacgtgtcgt 175812  T
Q  102 tgttataagaggtggtgtactcttac 127  Q
      ||||||||||||||||||||||||    
T  175811 ctttataagaggtggtgtactcttac 175786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 168557 - 168430
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | | || |||||||| || ||||||||||||| |||||| ||||||    
T  168557 atcatcgttggtgttgttgttgaagtcgtagttgtatccgtttttggtgattgatcaggttagatgtttctataagaggtggtgtactcttacgtgtcgt 168458  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
      |||||||||||||||||||| |||||    
T  168457 ctttataagaggtggtgtactcgtactt 168430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 153144 - 153278
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    |||||||| |||||||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||||  | |||||||| || |||||| |||||    
T  153144 tcatcatcattggtgttattgttgaagtcgtagttgtagccgttgttggtgattgtttatgtcaggtgttttatacgaggtggtatactcttactttgtc 153243  T
Q  100 gttgttataagaggtg--gtgtactcttactttgt 132  Q
    ||| ||||||||| ||  |||||||||||||||||    
T  153244 gtttttataagagatggtgtgtactcttactttgt 153278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 163469 - 163594
Alignment:
Q  69 tttttaaagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatct 167  Q
    |||| |||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||| |||      
T  163469 ttttaaaagaggtggtgtactcttactttgtcgtt-ttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttgtgacgattg 163567  T
Q  168 tctatagtgttgaatgcgaggttgtta 194  Q
    | |||||||||||||| ||||||||||    
T  163568 tttatagtgttgaatgtgaggttgtta 163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 175639 - 175584
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  175639 aagaggtggtgtactcttacttgtcgttgttataagaggtggtgtactcttacttt 175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 153321 - 153378
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  153321 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttactttgt 153378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 163375 - 163429
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  163375 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttactt 163429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 153387 - 153444
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  153387 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgcactcttactttgt 153444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 153553 - 153610
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  153553 aagaggtggtgtactcttacttgtcgtttttataaggggtggtgtactcttactttgt 153610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 207
Target Start/End: Original strand, 153653 - 153785
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    ||||||||||||| |||||| |||| |  ||||| |||||||||||||||| || |||||||||||| | | |||||||| ||||||||||   | |||     
T  153653 aagaggtggtgtactcttacgttgttga-gttatgagaggtggtgtactctcacgttgtttatgttgtttattatgacgatgttatgatgactgtttatg 153751  T
Q  174 gtgttgaatgcgaggttgttatgatattacatga 207  Q
    |||||||||  |||||||||||||| ||||||||    
T  153752 gtgttgaatatgaggttgttatgatgttacatga 153785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 175772 - 175718
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  175772 aagaggtggtgtactcttacttgtcgcttttataagaggtggtgtactcttactt 175718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 153487 - 153544
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||    
T  153487 aagaggtggtgtactcttacttgtcatttttataagaggtggtgtactcttcctttgt 153544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 163408 - 163465
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||||    
T  163408 aagaggtggtgtactcttacttgtcgtttttataagagatggtgtattcttactttgt 163465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 175739 - 175686
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  175739 aagaggtggtgtactcttacttgtcgtctttataagaggtggtgtactcttact 175686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 175805 - 175751
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  175805 aagaggtggtgtactcttacgtgtcgtctttataagaggtggtgtactcttactt 175751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 153288 - 153342
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  153288 aagaggtggtgtactcttactttgtcgtt-ttataagaggtggtgtactcttactt 153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 153354 - 153408
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  153354 aagaggtggtgtactcttactttgtcgttgt-ataagaggtggtgtactcttactt 153408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 175706 - 175651
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| ||||||| || ||  |||||||||||||||||||||||||||    
T  175706 aagaggtggtgtactcttactcgttgtctttataagaggtggtgtactcttacttt 175651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 153262 - 153312
Alignment:
Q  83 gtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  153262 gtgtactcttactttgtcgtttttataagaggtggtgtactcttactttgt 153312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 153420 - 153478
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||| | |||||||| |||||| |||||||||||||||||||||| ||||||    
T  153420 aagaggtggtgcactcttactttgtcgtttttataagaggtggtgtactcttcctttgt 153478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 163441 - 163499
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||| ||||||| |||||||| |||||| ||| |||||||||||||||||||||||||    
T  163441 aagagatggtgtattcttactttgtcgtttttaaaagaggtggtgtactcttactttgt 163499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 153454 - 153508
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||    
T  153454 aagaggtggtgtactcttcctttgtcgtt-ttataagaggtggtgtactcttactt 153508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 153520 - 153574
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactt 129  Q
    ||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||    
T  153520 aagaggtggtgtactcttcctttgtcgtt-ttataagaggtggtgtactcttactt 153574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 153590 - 153645
Alignment:
Q  79 ggtggtgtagtcttactt-gtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||| |||||||| |||| | |||||||||||||||||||||||| |||||    
T  153590 ggtggtgtactcttactttgtcgattttataagaggtggtgtactcttacgttgtt 153645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 153620 - 153678
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| || ||||||||||||||||||||||||| |||||    
T  153620 aagaggtggtgtactcttacgttgttgt-gttataagaggtggtgtactcttacgttgtt 153678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 175606 - 175549
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttg 131  Q
    ||||||||||||| ||||||||  | ||| || |||||||||||||||||||||||||    
T  175606 aagaggtggtgtactcttactttattgtttttctaagaggtggtgtactcttactttg 175549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 14326 - 14453
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgttttta-aagaggtggtgtagtcttacttgtcgt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| ||||||||||| ||||||||||||| |||||||||| ||    
T  14326 atcatcgttggtgttgttgttgaagtcgtagttgtatccgttgttggtgattgatcatgttagatgtttttataagaggtggtgtactcttacttgttgt 14425  T
Q  102 tgttataagaggtggtgtactcttactt 129  Q
    | ||||||||||||||||||||||||||    
T  14426 ttttataagaggtggtgtactcttactt 14453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 70; Significance: 1e-31; HSPs: 6)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 28850 - 28718
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||||| || |||  ||||||||||||| |||||| ||||     
T  28850 tcatcatcgttggtgttgttgttgaagccgtagttgtagccgttgttggttattgtttatgtcaggtgctttataagaggtggtgtactcttactttgtt 28751  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    ||| ||||||||||||||||||| |||| |||||    
T  28750 gtt-ttataagaggtggtgtacttttacgttgtt 28718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 34315 - 34183
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||||| || |||  ||||||||||||| |||||| ||||     
T  34315 tcatcatcgttggtgttgttgttgaagccgtagttgtagccgttgttggttattgtttatgtcaggtgctttataagaggtggtgtactcttactttgtt 34216  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    ||| ||||||||||||||||||| |||| |||||    
T  34215 gtt-ttataagaggtggtgtacttttacgttgtt 34183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 28710 - 28580
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    ||||||||||||| |||||| |||| |  ||||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||     
T  28710 aagaggtggtgtactcttacgttgttga-gttatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttatg 28612  T
Q  174 gtgttgaatgcgaggttgttatgatattacat 205  Q
     ||||||||  |||||||||||||| ||||||    
T  28611 atgttgaatatgaggttgttatgatgttacat 28580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 34175 - 34045
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctata 173  Q
    ||||||||||||| |||||| |||| |  ||||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||     
T  34175 aagaggtggtgtactcttacgttgttga-gttatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttatg 34077  T
Q  174 gtgttgaatgcgaggttgttatgatattacat 205  Q
     ||||||||  |||||||||||||| ||||||    
T  34076 atgttgaatatgaggttgttatgatgttacat 34045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 28551 - 28513
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  28551 attacatgatgttatctatgagttgttaaatgtacttga 28513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 34016 - 33978
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  34016 attacatgatgttatctatgagttgttaaatgtacttga 33978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 48277 - 48145
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtc 99  Q
    ||||||||||  |||||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||||||||||||| | |||| ||||     
T  48277 tcatcatcgtccgtgttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagaggtggtgtacttttactttgtt 48178  T
Q  100 gttgttataagaggtggtgtactcttactttgtt 133  Q
    | ||||||||||||||||||||||||||||||||    
T  48177 g-tgttataagaggtggtgtactcttactttgtt 48145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 48170 - 48109
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||| || ||||||  |||||||||||||||||||||| |||||    
T  48170 aagaggtggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 48109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 208747 - 208655
Alignment:
Q  75 aagaggtggtgtagtcttactt-gtcgttgtt-ataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgat 165  Q
    ||||||||||||| |||||||| || |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  208747 aagaggtggtgtactcttactttgttgttgtttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgat 208655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 208814 - 208759
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  208814 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 208759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 208781 - 208722
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  208781 aagaggtggtgtactcttactttatcgtttttataagaggtggtgtactcttactttgtt 208722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 208873 - 208837
Alignment:
Q  3 atcatcgttggtgttgttgttgaagtcgtagttgtat 39  Q
    ||||||| |||||||||||||||||||||||||||||    
T  208873 atcatcgctggtgttgttgttgaagtcgtagttgtat 208837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 4275 - 4162
Alignment:
Q  124 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcgaggttgttatgatattacatgaggttacctatgagttg 223  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | |||||||||||||| |||| | || |||| |||||||| |||| ||||||||||    
T  4275 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 4176  T
Q  224 ttaaatgtacttga 237  Q
    ||||||||||||||    
T  4175 ttaaatgtacttga 4162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 6203 - 6259
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  6203 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacgttgtt 6259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 4413 - 4356
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||    
T  4413 aagaggtggtgtactcttacttggtcgtt-ttataagagatggtgtactcttactttgt 4356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 92 - 35
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgttt 58  Q
    ||||||||||||||||||||||||| |||||||||||| |  | || |||||||||||    
T  92 tcatcatcgttggtgttgttgttgatgtcgtagttgtagccatcgtgggtgattgttt 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4510 - 4453
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgttt 58  Q
    ||||||||||||||||||||||||| |||||||||||| |  | || |||||||||||    
T  4510 tcatcatcgttggtgttgttgttgatgtcgtagttgtagccatcgtgggtgattgttt 4453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 4344 - 4291
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgttataagaggtggtgtactcttact 128  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  4344 aagaggtggtgtactcttacttggtcgtt-ttataagaggtcgtgtactcttact 4291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 4449 - 4392
Alignment:
Q  75 aagaggtggtgtagtcttacttg-tcgttgtt--ataagaggtggtgtactcttactt 129  Q
    ||||||||||||| ||||||||| ||||| ||  ||||||||||||||||||||||||    
T  4449 aagaggtggtgtactcttacttggtcgtttttttataagaggtggtgtactcttactt 4392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 34212 - 34123
Alignment:
Q  76 agaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 163  Q
    |||||||||||| |||||||| || | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34212 agaggtggtgtactcttactttgttggtgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 34280 - 34225
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  34280 aagaggtggtgtactcttacttgtcgtttttataagaggtggtgtactcttacttt 34225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 35032 - 34962
Alignment:
Q  3 atcatcgttggtgtt-gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttt 72  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||| |||| ||||    
T  35032 atcatcgttggtgtttgttgttgaagtcgtagttgtatccgttgttggtgattgatcatgttagatatttt 34962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 24162 - 24109
Alignment:
Q  3 atcatcgttggtgtt-gttgttgaagtcgtagttgtatctgttgttggtgattg 55  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  24162 atcatcgttggtgtttgttgttgaagtcgtagttgtatccgttgttggtgattg 24109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 34299 - 34259
Alignment:
Q  89 tcttacttgtcgttgttataagaggtggtgtactcttactt 129  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  34299 tcttacgtgtcgtttttataagaggtggtgtactcttactt 34259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 146123 - 146003
Alignment:
Q  13 gtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataaga 111  Q
    |||||||||||||||||||||||||| | ||||||||||| || ||||||||| |||| |  ||| ||||||||| |||||| |||| | ||||||||||    
T  146123 gtgttgttgttgaagtcgtagttgtagccgttgttggtgaatgattatgtcaggtgttgtgtaagtggtggtgtactcttactttgttg-tgttataaga 146025  T
Q  112 ggtggtgtactcttactttgtt 133  Q
    |||||||||||||||| |||||    
T  146024 ggtggtgtactcttacgttgtt 146003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 146028 - 145967
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgtt--ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| ||||||  |||||||||||||||||||||| |||||    
T  146028 aagaggtggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 145967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 360 - 449
Alignment:
Q  76 agaggtggtgtagtcttactt-gtcgttgt-tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 163  Q
    |||||||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  360 agaggtggtgtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 293 - 347
Alignment:
Q  76 agaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttacttt 130  Q
    |||||||||||| |||||||||||||| | || | ||||||||||||||||||||    
T  293 agaggtggtgtactcttacttgtcgttttcatcataggtggtgtactcttacttt 347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 54119 - 54235
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| |||||||||||||||| |||| ||||||| ||||||||||||| |||||| ||||  || || |||||||||    
T  54119 gttgttgaagtcgtagttgaagctgttattggtgattgtttatgttcaggtgtttttcaagaggtggtgtactcttacgttgttattctt-taagaggtg 54217  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  54218 gtgtactcttacgttgtt 54235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 54275 - 54331
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||    
T  54275 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtacccttacgttgtt 54331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 54210 - 54267
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  || |||||| |||||||||||||||||||||| |||||    
T  54210 aagaggtggtgtactcttac--gttgttgtttataagaggtggtgtactcttacgttgtt 54267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 7222 - 7337
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  ||||||||||||    
T  7222 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtg 7319  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  7320 gtgtactcttacgttgtt 7337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 21791 - 21675
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| ||||||| |||||||| |||||||||||  ||||||||||||| |||||| ||||  || || |||||||||    
T  21791 gttgttgaagtcgtagttgaagctgttattggtgactgtttatgttcagatgttttgtaagaggtggtgtactcttacgttgttattctt-taagaggtg 21693  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  21692 gtgtactcttacgttgtt 21675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 21635 - 21579
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||||||||||  |||||||||||||||| ||||||| |||||    
T  21635 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtgctcttacgttgtt 21579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 21571 - 21521
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  21571 aagaggtggtgtcctcttacttgtcgtt--tataagaggtggtgtactcttac 21521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 3004 - 3119
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||| ||||||||||||    
T  3004 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ttataagaggtg 3102  T
Q  116 gtgtactcttactttgt 132  Q
    |||||||||||| ||||    
T  3103 gtgtactcttacattgt 3119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 3162 - 3213
Alignment:
Q  76 agaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttac 127  Q
    |||||||||||| |||||| |||| ||| ||||||||||||||||||||||||    
T  3162 agaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactcttac 3213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 70745 - 70861
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgt--tgttataagaggt 114  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||||||||||   |||||||||||| ||||||  |||||  | |||||||||||    
T  70745 gttgttgaagtcgtagttgaagatgttgttggtgactgtttatgttcagatgttttgtgagaggtggtgtactcttac--gtcgttattttataagaggt 70842  T
Q  115 ggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||    
T  70843 ggtgtactcttacgttgtt 70861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18004 - 17918
Alignment:
Q  1 tcatcatcgttggtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgt 86  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||  ||||||||||||    
T  18004 tcatcatcgtccgtgttgttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtaagaggtggtgt 17918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 7772 - 7658
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttacttgtcgttgttataagaggtgg 116  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||   |||| ||  |||||||||||||    
T  7772 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactctacgttgttgt--ttataagaggtgg 7675  T
Q  117 tgtactcttactttgtt 133  Q
    ||||||||||| |||||    
T  7674 tgtactcttacgttgtt 7658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 7554 - 7498
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  7554 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 7498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 7618 - 7562
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  7618 aagaggtggtgtactcttacttgtcgtt--tataagaggtggtgtactcttacgttgtt 7562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 7683 - 7626
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgtt-ataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| ||||||  || |||||| |||||||||||||||||||||| |||||    
T  7683 aagaggtggtgtactcttac--gttgttgtttataagaggtggtgtactcttacattgtt 7626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 24877 - 24990
Alignment:
Q  19 ttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtgg 116  Q
    |||||||||||||||||| | ||||| |||||||||||||||| |||| ||||| | ||||||||||||| |||||| |||| ||  ||||| |||||||    
T  24877 ttgttgaagtcgtagttgaagctgttattggtgattgtttatgttcaggtgtttat-aagaggtggtgtactcttacattgttgt--ttatatgaggtgg 24973  T
Q  117 tgtactcttactttgtt 133  Q
    ||||||||||| |||||    
T  24974 tgtactcttacattgtt 24990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 5697 - 5802
Alignment:
Q  21 gttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtg 118  Q
    |||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  |||||||||||||||    
T  5697 gttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtggtg 5794  T
Q  119 tactctta 126  Q
    ||||||||    
T  5795 tactctta 5802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 720 - 827
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||| ||||||||||||    
T  720 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ttataagaggtg 818  T
Q  116 gtgtactct 124  Q
    |||| ||||    
T  819 gtgtgctct 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 67101 - 66993
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  ||||||||||||    
T  67101 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtg 67004  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  67003 gtgtactctta 66993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 170030 - 170138
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  ||||||||||||    
T  170030 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtg 170127  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  170128 gtgtactctta 170138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 170218 - 170275
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| ||||    
T  170218 aagaggtggtgtactcttacgttgtggtt-ttataagaggtggtgtactcttacgttgt 170275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 126865 - 126751
Alignment:
Q  20 tgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtggt 117  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| |||  |||||||||||||    
T  126865 tgttgaagtcgtagttgaagctgttattggtgagtgtttatgctcaggtgttttgtgagaggtggtgtactcttacgttgttgtt-ctataagaggtggt 126767  T
Q  118 gtactcttactttgtt 133  Q
    |||||||||| |||||    
T  126766 gtactcttacgttgtt 126751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 7996 - 7887
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||  ||||||||||||| |||||| ||||  || || |||||||||    
T  7996 gttgttgaagtcgtagttgaagttgttgttggtgactgtttatgttcaggtgttttgtaagaggtggtgtactcttacgttgttattctt-taagaggtg 7898  T
Q  116 gtgtactctta 126  Q
    |||||||||||    
T  7897 gtgtactctta 7887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 7841 - 7792
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactctta 126  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  7841 aagaggtggtgtactcttacttgtcgt--ttataagaggtggtgtactctta 7792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 7905 - 7855
Alignment:
Q  75 aagaggtggtgtagtcttacttgtcgttgttataagaggtggtgtactcttac 127  Q
    ||||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  7905 aagaggtggtgtactcttatttgtcgtt--tataagaggtggtgtactcttac 7855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 78243 - 78128
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||   |||||||||||| |||||| |||| ||  |||||||||||     
T  78243 gttgttgaagtcgtagttgaagatgttgttggtgactgtttatgttcaggtgttttgtgagaggtggtgtactcttacgttgttgt--ttataagaggtt 78146  T
Q  116 gtgtactcttactttgtt 133  Q
    |||||||||||| |||||    
T  78145 gtgtactcttacgttgtt 78128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 209 - 97
Alignment:
Q  13 gtgttgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgtcagatgtttttaaagaggtggtgtagtcttacttgtcgttg--ttataag 110  Q
    |||||||||||||||||||||||| | ||||||||||||| || ||| ||  | |||||   ||||||||||||| ||||||  |||||||  |||||||    
T  209 gtgttgttgttgaagtcgtagttgaagctgttgttggtgactgattacgt-tgttgtttcataagaggtggtgtaatcttac--gtcgttgttttataag 113  T
Q  111 aggtggtgtactctta 126  Q
    ||||||||||||||||    
T  112 aggtggtgtactctta 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 7183 - 7295
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatg-tcagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggtg 115  Q
    ||||||||||||||||||| | ||||| |||||||||||||||| |||| | ||||  ||||||||||||| |||||| ||||  || || |||||||||    
T  7183 gttgttgaagtcgtagttgaagctgttattggtgattgtttatgttcaggtattttgtaagaggtggtgtactcttacgttgttattctt-taagaggtg 7281  T
Q  116 gtgtactcttactt 129  Q
     |||||||||||||    
T  7282 ctgtactcttactt 7295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 4155 - 4043
Alignment:
Q  22 ttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtg 118  Q
    ||||||||||||||| |  |||||||||||  ||||||||| ||| ||||||   |||||||||||| ||||||  |||||| ||  |||||||||||||    
T  4155 ttgaagtcgtagttgaagttgttgttggtggctgtttatgttcaggtgttttgtgagaggtggtgtactcttac--gtcgttattttataagaggtggtg 4058  T
Q  119 tactcttactttgtt 133  Q
    ||||||||| |||||    
T  4057 tactcttacgttgtt 4043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 4155 - 4043
Alignment:
Q  22 ttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgtt--ataagaggtggtg 118  Q
    ||||||||||||||| |  |||||||||||  ||||||||| ||| ||||||   |||||||||||| ||||||  |||||| ||  |||||||||||||    
T  4155 ttgaagtcgtagttgaagttgttgttggtggctgtttatgttcaggtgttttgtgagaggtggtgtactcttac--gtcgttattttataagaggtggtg 4058  T
Q  119 tactcttactttgtt 133  Q
    ||||||||| |||||    
T  4057 tactcttacgttgtt 4043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 69113 - 69056
Alignment:
Q  76 agaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||    
T  69113 agaggtggtgtactcttacgttgtcgtt-ttataagaggtggtgtactcttacgttgtt 69056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 69048 - 68997
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactctta 126  Q
    ||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  69048 aagaggtggtgtactcttacgttgtcgtc-ttataagaggtggtgtactctta 68997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 56 - 12
Alignment:
Q  18 gttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt 62  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||    
T  56 gttgttgaagtcgtagttgaagctgttgttggtgactgtttatgt 12  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 3698 - 3756
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgtt 133  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| |||||    
T  3698 aagaggtggtgtactcttacgttgtagtt-ttataagaggtggtgtactcttacgttgtt 3756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 717 - 610
Alignment:
Q  20 tgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttacttgtcgttgtt--ataagaggtgg 116  Q
    |||| |||||||||||| |  |||| ||||||| ||||||||| ||| ||||||  ||||||||||||| | ||||  || ||||||  |||||||||||    
T  717 tgttaaagtcgtagttgaagatgttattggtgactgtttatgttcaggtgttttgtaagaggtggtgtactgttac--gtagttgttctataagaggtgg 620  T
Q  117 tgtactctta 126  Q
    ||||||||||    
T  619 tgtactctta 610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 6960 - 6998
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  6960 attacatgatgttatctatgagttgttaaatgtacttga 6998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 21339 - 21377
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  21339 attacatgatgttatctatgagttgttaaatgtacttga 21377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 10387 - 10330
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactcttactttgt 132  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||| ||||    
T  10387 aagaggtggtgtactcttacgttgtggtt-ttataagaggtggtgtactcttacgttgt 10330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 2164 - 2271
Alignment:
Q  17 tgttgttgaagtcgtagttgtatctgttgttggtgattgtttatgt-cagatgtttttaaagaggtggtgtagtcttac-ttgtcgttgttataagaggt 114  Q
    |||||||||||| ||||||| | ||||||||||||| ||||| ||| |||  ||| | |  ||||||||||| |||||| |||||||  |||||||||||    
T  2164 tgttgttgaagtggtagttgaaactgttgttggtgactgtttgtgttcag--gttgtga--gaggtggtgtactcttacgttgtcgta-ttataagaggt 2258  T
Q  115 ggtgtactcttac 127  Q
    |||||||||||||    
T  2259 ggtgtactcttac 2271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 37202 - 37240
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  37202 attacatgatgttatctatgagttgttaaatgtacttga 37240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 74331 - 74369
Alignment:
Q  199 attacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  74331 attacatgatgttatctatgagttgttaaatgtacttga 74369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 25569 - 25605
Alignment:
Q  201 tacatgaggttacctatgagttgttaaatgtacttga 237  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  25569 tacatgatgttatctatgagttgttaaatgtacttga 25605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 1609 - 1660
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactctta 126  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  1609 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactctta 1660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 8360 - 8411
Alignment:
Q  75 aagaggtggtgtagtcttac-ttgtcgttgttataagaggtggtgtactctta 126  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  8360 aagaggtggtgtactcttacgttgttgtt-ttataagaggtggtgtactctta 8411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University