View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1690_high_26 (Length: 351)

Name: NF1690_high_26
Description: NF1690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1690_high_26
NF1690_high_26
[»] chr3 (50 HSPs)
chr3 (217-322)||(18346787-18346892)
chr3 (55-127)||(10546932-10547004)
chr3 (55-127)||(13001421-13001493)
chr3 (55-124)||(4382896-4382965)
chr3 (55-129)||(12160203-12160277)
chr3 (55-126)||(3245584-3245655)
chr3 (55-122)||(9360967-9361034)
chr3 (55-122)||(10602468-10602535)
chr3 (55-126)||(11398357-11398428)
chr3 (55-126)||(13097852-13097923)
chr3 (55-122)||(13504877-13504944)
chr3 (55-122)||(16448756-16448823)
chr3 (55-125)||(14348584-14348654)
chr3 (58-127)||(17387977-17388046)
chr3 (55-123)||(7600506-7600574)
chr3 (55-123)||(10160169-10160237)
chr3 (55-123)||(12187072-12187140)
chr3 (55-123)||(15556938-15557006)
chr3 (55-123)||(15645152-15645220)
chr3 (55-123)||(16373561-16373629)
chr3 (56-112)||(27356725-27356781)
chr3 (55-123)||(37942529-37942597)
chr3 (55-110)||(3339222-3339277)
chr3 (55-122)||(11947559-11947626)
chr3 (55-110)||(12776530-12776585)
chr3 (55-126)||(13690749-13690820)
chr3 (55-110)||(15946773-15946828)
chr3 (55-126)||(20156511-20156581)
chr3 (55-110)||(20584267-20584322)
chr3 (56-110)||(13136207-13136261)
chr3 (55-112)||(13601224-13601281)
chr3 (249-318)||(18321473-18321542)
chr3 (55-123)||(10147162-10147230)
chr3 (55-123)||(13187413-13187481)
chr3 (55-127)||(22637840-22637912)
chr3 (55-126)||(2721445-2721515)
chr3 (55-110)||(3279348-3279403)
chr3 (55-110)||(13068306-13068361)
chr3 (55-110)||(14445764-14445819)
chr3 (55-110)||(15619279-15619334)
chr3 (67-126)||(17045843-17045902)
chr3 (67-126)||(17048003-17048062)
chr3 (55-126)||(20225750-20225821)
chr3 (55-104)||(13195454-13195503)
chr3 (55-123)||(6815019-6815087)
chr3 (55-123)||(12193486-12193554)
chr3 (55-104)||(8686383-8686432)
chr3 (55-126)||(1992944-1993015)
chr3 (55-90)||(2005499-2005534)
chr3 (76-108)||(842020-842052)
[»] chr2 (30 HSPs)
chr2 (55-129)||(23644090-23644164)
chr2 (55-127)||(5500261-5500333)
chr2 (55-127)||(25144753-25144825)
chr2 (55-122)||(22665214-22665281)
chr2 (55-112)||(25804263-25804320)
chr2 (55-123)||(16775802-16775870)
chr2 (55-123)||(22044656-22044724)
chr2 (55-127)||(23798918-23798990)
chr2 (55-115)||(24171505-24171565)
chr2 (55-123)||(25357662-25357730)
chr2 (55-123)||(27627732-27627800)
chr2 (55-122)||(17590559-17590626)
chr2 (55-110)||(23159381-23159436)
chr2 (55-110)||(23570638-23570693)
chr2 (55-126)||(24506798-24506869)
chr2 (55-110)||(27631660-27631715)
chr2 (55-110)||(27768812-27768867)
chr2 (55-112)||(24795281-24795338)
chr2 (55-112)||(25370881-25370938)
chr2 (55-126)||(24178189-24178260)
chr2 (55-126)||(25337647-25337718)
chr2 (55-112)||(11611-11668)
chr2 (55-112)||(117705-117762)
chr2 (55-105)||(24321338-24321388)
chr2 (55-112)||(23257566-23257622)
chr2 (60-106)||(29955867-29955913)
chr2 (55-112)||(24019063-24019120)
chr2 (60-104)||(19805618-19805662)
chr2 (60-102)||(17334606-17334648)
chr2 (55-105)||(21512562-21512612)
[»] chr4 (21 HSPs)
chr4 (55-127)||(17484906-17484978)
chr4 (55-129)||(56580535-56580609)
chr4 (55-124)||(18081455-18081524)
chr4 (55-122)||(10630902-10630969)
chr4 (55-122)||(11496610-11496677)
chr4 (55-122)||(13823065-13823132)
chr4 (55-114)||(38426883-38426942)
chr4 (55-122)||(42709727-42709794)
chr4 (55-127)||(18292085-18292157)
chr4 (55-127)||(45234228-45234300)
chr4 (56-127)||(3354787-3354858)
chr4 (55-110)||(14653994-14654049)
chr4 (55-110)||(15254512-15254567)
chr4 (55-110)||(10650552-10650607)
chr4 (55-110)||(15260105-15260160)
chr4 (55-110)||(15409534-15409589)
chr4 (55-110)||(15865652-15865707)
chr4 (55-110)||(16682918-16682973)
chr4 (55-105)||(9488874-9488924)
chr4 (55-112)||(8092423-8092480)
chr4 (55-105)||(17296245-17296295)
[»] chr7 (37 HSPs)
chr7 (55-129)||(16532241-16532315)
chr7 (55-129)||(16633347-16633421)
chr7 (55-126)||(538751-538822)
chr7 (55-125)||(11921303-11921373)
chr7 (55-125)||(16465612-16465682)
chr7 (55-126)||(4312705-4312776)
chr7 (55-129)||(12548801-12548875)
chr7 (55-127)||(20108516-20108588)
chr7 (55-126)||(4461238-4461309)
chr7 (55-122)||(9583045-9583112)
chr7 (55-126)||(13658014-13658085)
chr7 (55-122)||(14551251-14551318)
chr7 (55-110)||(16119845-16119900)
chr7 (55-122)||(23515219-23515286)
chr7 (55-123)||(18593348-18593416)
chr7 (55-123)||(18618268-18618336)
chr7 (55-110)||(825788-825843)
chr7 (55-122)||(8718017-8718084)
chr7 (55-126)||(8780932-8781003)
chr7 (55-110)||(14221714-14221769)
chr7 (55-110)||(15916772-15916827)
chr7 (55-110)||(18287766-18287821)
chr7 (55-110)||(27291501-27291556)
chr7 (61-127)||(9004099-9004165)
chr7 (55-105)||(15065938-15065988)
chr7 (56-125)||(9264936-9265005)
chr7 (55-120)||(12567168-12567233)
chr7 (55-112)||(13674018-13674075)
chr7 (55-110)||(5397280-5397335)
chr7 (55-114)||(9194540-9194599)
chr7 (55-110)||(15206580-15206635)
chr7 (55-110)||(48801772-48801827)
chr7 (55-101)||(4791378-4791424)
chr7 (63-112)||(6713072-6713121)
chr7 (55-112)||(15348535-15348592)
chr7 (55-112)||(15522520-15522577)
chr7 (60-102)||(15940731-15940773)
[»] scaffold0974 (1 HSPs)
scaffold0974 (57-129)||(1248-1320)
[»] scaffold0582 (1 HSPs)
scaffold0582 (55-127)||(8801-8873)
[»] chr8 (27 HSPs)
chr8 (55-126)||(20038977-20039048)
chr8 (55-129)||(16418616-16418690)
chr8 (55-129)||(21939992-21940066)
chr8 (55-126)||(17620894-17620965)
chr8 (55-122)||(21098790-21098857)
chr8 (55-122)||(21104111-21104178)
chr8 (55-122)||(21843520-21843587)
chr8 (55-126)||(14352168-14352237)
chr8 (55-110)||(21831181-21831236)
chr8 (55-110)||(22033551-22033606)
chr8 (55-110)||(22099651-22099706)
chr8 (55-123)||(8314619-8314687)
chr8 (55-127)||(20712581-20712653)
chr8 (55-127)||(21538697-21538769)
chr8 (55-110)||(11346949-11347004)
chr8 (55-110)||(19767689-19767744)
chr8 (55-110)||(20002279-20002334)
chr8 (55-122)||(21382246-21382313)
chr8 (55-110)||(22370107-22370162)
chr8 (55-122)||(23911592-23911659)
chr8 (55-122)||(24034167-24034234)
chr8 (56-110)||(22817755-22817809)
chr8 (55-123)||(8322842-8322910)
chr8 (55-126)||(23455086-23455158)
chr8 (55-110)||(22102557-22102612)
chr8 (55-105)||(18572972-18573022)
chr8 (60-102)||(19902174-19902216)
[»] scaffold0156 (1 HSPs)
scaffold0156 (56-126)||(974-1044)
[»] scaffold0034 (1 HSPs)
scaffold0034 (55-129)||(58624-58698)
[»] scaffold0032 (1 HSPs)
scaffold0032 (55-129)||(97722-97796)
[»] scaffold0020 (1 HSPs)
scaffold0020 (55-129)||(121092-121166)
[»] chr6 (27 HSPs)
chr6 (55-127)||(2181201-2181273)
chr6 (55-126)||(18854159-18854230)
chr6 (55-125)||(23023236-23023306)
chr6 (58-126)||(18184873-18184941)
chr6 (55-127)||(18448281-18448353)
chr6 (58-126)||(21560553-21560621)
chr6 (55-122)||(15699707-15699774)
chr6 (55-122)||(22165545-22165612)
chr6 (55-122)||(22243964-22244031)
chr6 (55-126)||(29595837-29595908)
chr6 (55-125)||(25963391-25963461)
chr6 (55-125)||(25968038-25968108)
chr6 (55-125)||(30671803-30671873)
chr6 (55-123)||(20170394-20170462)
chr6 (55-123)||(24855241-24855309)
chr6 (63-126)||(20107784-20107847)
chr6 (55-122)||(22061499-22061566)
chr6 (55-126)||(25625832-25625903)
chr6 (55-110)||(35270977-35271032)
chr6 (58-112)||(22767115-22767169)
chr6 (56-122)||(25631266-25631332)
chr6 (55-127)||(20218977-20219049)
chr6 (55-127)||(22113002-22113074)
chr6 (55-110)||(11204009-11204064)
chr6 (55-110)||(18731880-18731935)
chr6 (55-112)||(29686604-29686661)
chr6 (63-110)||(23517835-23517882)
[»] scaffold0506 (1 HSPs)
scaffold0506 (56-127)||(2284-2355)
[»] scaffold0162 (1 HSPs)
scaffold0162 (55-126)||(35100-35171)
[»] scaffold0113 (1 HSPs)
scaffold0113 (55-126)||(361-432)
[»] scaffold0026 (1 HSPs)
scaffold0026 (55-126)||(11197-11268)
[»] chr1 (15 HSPs)
chr1 (56-127)||(52938618-52938689)
chr1 (55-127)||(3990086-3990158)
chr1 (55-123)||(17094597-17094665)
chr1 (55-113)||(20237617-20237675)
chr1 (55-121)||(27047027-27047093)
chr1 (55-123)||(14070656-14070724)
chr1 (55-123)||(21798658-21798726)
chr1 (55-122)||(8653268-8653335)
chr1 (55-104)||(19364199-19364248)
chr1 (55-112)||(19875640-19875697)
chr1 (55-110)||(8947511-8947566)
chr1 (55-110)||(21784468-21784523)
chr1 (55-110)||(4027844-4027899)
chr1 (62-105)||(16382578-16382621)
chr1 (60-102)||(18478234-18478276)
[»] chr5 (25 HSPs)
chr5 (55-129)||(20444835-20444909)
chr5 (55-127)||(24219893-24219965)
chr5 (55-122)||(15735686-15735753)
chr5 (55-122)||(20595827-20595894)
chr5 (55-122)||(20602113-20602180)
chr5 (55-122)||(20608404-20608471)
chr5 (55-122)||(23600632-23600699)
chr5 (55-123)||(18073051-18073119)
chr5 (55-123)||(20790710-20790778)
chr5 (55-123)||(23748202-23748270)
chr5 (55-123)||(24940685-24940753)
chr5 (55-110)||(22317509-22317564)
chr5 (55-110)||(22855728-22855783)
chr5 (55-110)||(25006804-25006859)
chr5 (55-110)||(30759651-30759706)
chr5 (55-105)||(25116167-25116217)
chr5 (55-104)||(25175257-25175306)
chr5 (55-123)||(24953170-24953238)
chr5 (55-110)||(18484208-18484263)
chr5 (55-110)||(26847808-26847863)
chr5 (55-104)||(21387560-21387609)
chr5 (60-104)||(27270563-27270607)
chr5 (55-110)||(20916452-20916507)
chr5 (77-123)||(20622313-20622359)
chr5 (55-105)||(17412739-17412789)
[»] scaffold0328 (1 HSPs)
scaffold0328 (55-127)||(506-578)
[»] scaffold0096 (1 HSPs)
scaffold0096 (55-127)||(38504-38576)
[»] scaffold0011 (3 HSPs)
scaffold0011 (55-127)||(164399-164471)
scaffold0011 (55-110)||(162007-162062)
scaffold0011 (55-126)||(172250-172321)
[»] scaffold0679 (1 HSPs)
scaffold0679 (55-126)||(8082-8153)
[»] scaffold0420 (1 HSPs)
scaffold0420 (55-122)||(10202-10269)
[»] scaffold0315 (1 HSPs)
scaffold0315 (55-126)||(14658-14729)
[»] scaffold0230 (1 HSPs)
scaffold0230 (55-122)||(15830-15897)
[»] scaffold0215 (1 HSPs)
scaffold0215 (55-122)||(611-678)
[»] scaffold0029 (2 HSPs)
scaffold0029 (55-122)||(123521-123588)
scaffold0029 (60-102)||(77391-77433)
[»] scaffold0825 (1 HSPs)
scaffold0825 (55-127)||(2848-2920)
[»] scaffold0004 (1 HSPs)
scaffold0004 (55-127)||(251866-251938)
[»] scaffold1225 (1 HSPs)
scaffold1225 (55-126)||(1835-1906)
[»] scaffold0861 (1 HSPs)
scaffold0861 (55-110)||(919-974)
[»] scaffold0566 (1 HSPs)
scaffold0566 (55-110)||(2767-2822)
[»] scaffold0512 (1 HSPs)
scaffold0512 (55-110)||(5244-5299)
[»] scaffold0375 (1 HSPs)
scaffold0375 (55-110)||(12743-12798)
[»] scaffold0056 (1 HSPs)
scaffold0056 (55-110)||(42249-42304)
[»] scaffold0035 (2 HSPs)
scaffold0035 (55-110)||(50502-50557)
scaffold0035 (60-102)||(88361-88403)
[»] scaffold0773 (1 HSPs)
scaffold0773 (55-104)||(642-691)
[»] scaffold0404 (2 HSPs)
scaffold0404 (55-112)||(3471-3528)
scaffold0404 (55-112)||(1200-1257)
[»] scaffold0031 (1 HSPs)
scaffold0031 (55-103)||(22774-22822)
[»] scaffold0384 (1 HSPs)
scaffold0384 (55-110)||(10725-10780)
[»] scaffold0258 (1 HSPs)
scaffold0258 (55-110)||(22151-22206)
[»] scaffold0117 (1 HSPs)
scaffold0117 (55-110)||(45224-45279)
[»] scaffold0089 (1 HSPs)
scaffold0089 (55-110)||(54845-54900)
[»] scaffold0059 (1 HSPs)
scaffold0059 (55-122)||(12548-12615)
[»] scaffold0013 (1 HSPs)
scaffold0013 (55-122)||(232783-232850)
[»] scaffold0278 (1 HSPs)
scaffold0278 (55-125)||(12998-13068)
[»] scaffold0116 (1 HSPs)
scaffold0116 (55-105)||(37739-37789)
[»] scaffold0123 (1 HSPs)
scaffold0123 (56-104)||(18218-18266)
[»] scaffold0094 (1 HSPs)
scaffold0094 (55-112)||(1196-1253)
[»] scaffold0088 (1 HSPs)
scaffold0088 (55-112)||(37873-37930)
[»] scaffold0037 (2 HSPs)
scaffold0037 (56-105)||(72569-72618)
scaffold0037 (56-105)||(84759-84808)
[»] scaffold0001 (1 HSPs)
scaffold0001 (55-112)||(83154-83211)
[»] scaffold0226 (1 HSPs)
scaffold0226 (62-102)||(3251-3291)


Alignment Details
Target: chr3 (Bit Score: 94; Significance: 8e-46; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 217 - 322
Target Start/End: Complemental strand, 18346892 - 18346787
Alignment:
Q  217 attagaagacacattaaaaaacatttgtaattttgtttaataaaccaaaagaaatggcccgttaccggcaagcaatgattcgtgctcgaaaatagttttg 316  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  18346892 attagaagacacgttaaaaaacatttgtaattttgtttaataaaccaaaagaaatagcccgttaccagcaagcaatgattcgtgctcgaaaatagttttg 18346793  T
Q  317 tattgc 322  Q
    ||||||    
T  18346792 tattgc 18346787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 10546932 - 10547004
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  10546932 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaa 10547004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 13001421 - 13001493
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  13001421 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaa 13001493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 4382965 - 4382896
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcata 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  4382965 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcata 4382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 12160203 - 12160277
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| ||||||||||    
T  12160203 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcataaacatggtggcataaaata 12160277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 3245584 - 3245655
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  3245584 gactgatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaa 3245655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 9360967 - 9361034
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  9360967 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 9361034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 10602468 - 10602535
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  10602468 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 10602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 11398428 - 11398357
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||    
T  11398428 gactcatcaaactcccccacacttgaatatttgcttgtcctcaagcaaaaggcataaatatagcagcataaa 11398357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 13097923 - 13097852
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  13097923 gactcatcaaactcccccacatttgaatctttgcttgtcctcaagtaaaaggcataaacatggtagcataaa 13097852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 13504877 - 13504944
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  13504877 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 13504944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 16448756 - 16448823
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  16448756 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 16448823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 14348584 - 14348654
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||    
T  14348584 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggtaacataa 14348654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 17388046 - 17387977
Alignment:
Q  58 tcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||    
T  17388046 tcatcaaactcccccacacttgaatctttgcttgtccttaagcaaaaggcatcaacatggtagcataaaa 17387977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 7600574 - 7600506
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  7600574 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 7600506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 10160169 - 10160237
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  10160169 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 10160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 12187072 - 12187140
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  12187072 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 12187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 15556938 - 15557006
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| || |||||||    
T  15556938 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagcat 15557006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 15645220 - 15645152
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  15645220 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 15645152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 16373561 - 16373629
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  16373561 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 16373629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 27356725 - 27356781
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27356725 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaa 27356781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 37942597 - 37942529
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  37942597 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 37942529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 3339222 - 3339277
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3339222 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 3339277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 11947626 - 11947559
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||||    
T  11947626 gactcatcaaactcccccacacttgaatctttacttgtcctcaagcaaaaggcataaacatagtagca 11947559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 12776530 - 12776585
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12776530 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 12776585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 13690820 - 13690749
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||| |||||||||||||    
T  13690820 gactcatcaaactcccccacacttgaatctttagttgtcatcaagcaaaaggcataaacatggtagcataaa 13690749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 15946828 - 15946773
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15946828 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15946773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 20156511 - 20156581
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||| |||||||||||||    
T  20156511 gactcatcaaactcccccacacttgaatc-ttgcttgtcctcaagcaaaatgcataaacatggtagcataaa 20156581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 20584322 - 20584267
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20584322 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 20584267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 13136207 - 13136261
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13136207 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 13136261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 13601281 - 13601224
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  13601281 gactcatcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaa 13601224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 18321542 - 18321473
Alignment:
Q  249 ttgtttaataaaccaaaagaaatggcccgttaccggcaagcaatgattcgtgctcgaaaatagttttgta 318  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||||||||| || ||||||||||||||    
T  18321542 ttgtttaataaaccaaaggaaatagcccgttaccggccagcaatgattcgtgatctaaaatagttttgta 18321473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 10147230 - 10147162
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| || |||||||    
T  10147230 gactcatcaaactcccccatacttgagtctttgcttgtcctcaagcaaaaggcataaacatagtagcat 10147162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 13187413 - 13187481
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  13187413 gactgatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 13187481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 22637912 - 22637840
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||| || ||||||||||||||    
T  22637912 gactcatcaaactcccctacacttgaatctttacttgtgctcaagcaaaaggcatcaacatggtagcataaaa 22637840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 2721515 - 2721445
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| || | ||||||||    
T  2721515 gactcatcaaactcccc-acacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcataaa 2721445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 3279403 - 3279348
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  3279403 gactcatcaaactcccccacacttgaatctttgtttgtcctcaagcaaaaggcata 3279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 13068361 - 13068306
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  13068361 gactcatcaaactcccccacacttgaatctttacttgtcctcaaccaaaagacata 13068306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 14445764 - 14445819
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  14445764 gactcatcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaggcata 14445819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 15619279 - 15619334
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15619279 gactcatcaaactgccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15619334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 17045902 - 17045843
Alignment:
Q  67 tcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  17045902 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagcataaa 17045843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 17048062 - 17048003
Alignment:
Q  67 tcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  17048062 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagcataaa 17048003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 20225750 - 20225821
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| || | ||||||||    
T  20225750 gactcatcaaactcccccatacttaaatctttgtttgtcctcaagcaaaagacataaacatagcagcataaa 20225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 13195454 - 13195503
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13195454 gactcatcaaactcccacacacttgaatctttgcttgtcctcaagcaaaa 13195503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 6815087 - 6815019
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  6815087 gactcattaaactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 6815019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 12193486 - 12193554
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||| |||||| || |||||||    
T  12193486 gacttatcaaactcccccatacctgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 12193554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 8686383 - 8686432
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  8686383 gactcatcaaactcccccatacttgaatctttgcttgtcctcaaacaaaa 8686432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 1993015 - 1992944
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||| | | ||||||||||||||||| | |||||||||||| |||||| || ||||||||||    
T  1993015 gactcatcaaactctctcccacttgaatctttgcttatgctcaagcaaaaggcataaacatagtagcataaa 1992944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 2005534 - 2005499
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgctt 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  2005534 gactcatcaaactcccccacacttgaatctttgctt 2005499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 842052 - 842020
Alignment:
Q  76 cttgaatctttgcttgtcctcaagcaaaagaca 108  Q
    |||||||||||| ||||||||||||||||||||    
T  842052 cttgaatctttgtttgtcctcaagcaaaagaca 842020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 23644164 - 23644090
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23644164 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaata 23644090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 5500261 - 5500333
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  5500261 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 5500333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 25144753 - 25144825
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  25144753 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 25144825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 22665281 - 22665214
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  22665281 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22665214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 25804263 - 25804320
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25804263 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaa 25804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 16775870 - 16775802
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  16775870 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 16775802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 22044656 - 22044724
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  22044656 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 22044724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 23798918 - 23798990
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| || |||||||||||    
T  23798918 gactcatcaaactcccccacacttgaatctttgattatcctcaagcaaaaggcataaacatagtagcataaaa 23798990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 24171565 - 24171505
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  24171565 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagatat 24171505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 25357730 - 25357662
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  25357730 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 25357662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 27627800 - 27627732
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  27627800 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 27627732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 17590626 - 17590559
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||    
T  17590626 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 17590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 23159381 - 23159436
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23159381 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 23159436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 23570638 - 23570693
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23570638 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 23570693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 24506869 - 24506798
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| || | ||||||||    
T  24506869 gactcatcaaactcccccacacttgaatcttttattgtcctcaagcaaaagacataaacatagcagcataaa 24506798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 27631715 - 27631660
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27631715 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 27631660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 27768812 - 27768867
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27768812 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 27768867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 24795281 - 24795338
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24795281 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaa 24795338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 25370881 - 25370938
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25370881 gactcattcaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 25370938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 24178189 - 24178260
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||| || | ||||||||    
T  24178189 gactcatcaaactcccccacacttgaatctttgcttgtcttcaaacaaaaggcataaacatagcagcataaa 24178260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 25337647 - 25337718
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||| | ||||||||    
T  25337647 gactcatcaaattcccccatacttgaatctttgcttgtcctcaagaaaaaggcataaatatagcagcataaa 25337718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 11611 - 11668
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  11611 gactcatcaaactcccccacacttgcctctttgcttgtcctcaagcaaaaggcataaa 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 117762 - 117705
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  117762 gactcatcaaactcccccacacttgcatatttgcttgtcctcaagcaaaaggcataaa 117705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 24321388 - 24321338
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  24321388 gactcattaaactcccccatacttgaatctttgcttgtcctcaagcaaaag 24321338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 23257566 - 23257622
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  23257566 gactcatcaaactcccc-atacttgaatctttgcttgtcctcaagcaaaaggcataaa 23257622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 29955913 - 29955867
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaga 106  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||    
T  29955913 atcaaacttcccgatacttgaatctttgcttgtcctcaagcaaaaga 29955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 24019063 - 24019120
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||| |||||| ||||||| ||||||||||||  |||||||||| |||||||||||||    
T  24019063 gacttatcaaattcccccatacttgaatctttttttgtcctcaaacaaaagacataaa 24019120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 19805618 - 19805662
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||    
T  19805618 atcaaactcccccacactagaaccattgcttgtcctcaagcaaaa 19805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 17334606 - 17334648
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 102  Q
    |||||||||||||||||||||| | ||| ||||||||||||||    
T  17334606 atcaaactcccccacacttgaaccattgattgtcctcaagcaa 17334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 21512562 - 21512612
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    |||| |||||| |||||||  |||||||| |||||||||||||||||||||    
T  21512562 gacttatcaaattcccccatgcttgaatccttgcttgtcctcaagcaaaag 21512612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 17484906 - 17484978
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17484906 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaatatggtagcataaaa 17484978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 56580535 - 56580609
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  56580535 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaata 56580609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 18081455 - 18081524
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcata 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  18081455 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcata 18081524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 10630969 - 10630902
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10630969 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 10630902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 11496610 - 11496677
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  11496610 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 11496677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 13823132 - 13823065
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  13823132 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 13823065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 38426942 - 38426883
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38426942 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaata 38426883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 42709727 - 42709794
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  42709727 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 42709794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 18292157 - 18292085
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||| ||||    
T  18292157 gactcatcaaactcccccacacttgaatctttgcttgtccacaagaaaaaggcataaacatggtagcacaaaa 18292085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 45234228 - 45234300
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||    
T  45234228 gactcatcaaactcccccagacttgaatctttgcttgtcctcaagtaaaaggcataaacatggtggcataaaa 45234300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 3354858 - 3354787
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||||| ||||    
T  3354858 actcatcaaactcccccacacttgaatagttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 3354787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 14653994 - 14654049
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14653994 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 14654049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 15254567 - 15254512
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15254567 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 10650607 - 10650552
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  10650607 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcata 10650552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 15260105 - 15260160
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  15260105 gactcatcaaactcccccacacttgaatctttgcttttcctcaagcaaaaggcata 15260160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 15409589 - 15409534
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  15409589 gactcatcaaactcccccacactagaatctttgcttgtcctcaagcaaaaggcata 15409534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 15865707 - 15865652
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15865707 gactcctcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15865652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 16682973 - 16682918
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  16682973 gactcatcaaactcccccacacttgaatctttgcttgtcatcaagcaaaaggcata 16682918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 9488874 - 9488924
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  9488874 gactcatcaaactcccccatacttcaatctttgcttgtcctcaagcaaaag 9488924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 8092423 - 8092480
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||    
T  8092423 gactcatcaaactttcccatacttgaatctttgcttgtcctcaagaaaaagacataaa 8092480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 17296245 - 17296295
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  17296245 gacttatcaaactcccccatgcttgaatctttgcttgtcctcaagcaaaag 17296295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 16532315 - 16532241
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16532315 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaata 16532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 16633347 - 16633421
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16633347 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaata 16633421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 538751 - 538822
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  538751 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 538822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 11921303 - 11921373
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  11921303 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagtcataaacatggtagcataa 11921373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 16465612 - 16465682
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  16465612 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatagtagcataa 16465682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 4312776 - 4312705
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  4312776 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaa 4312705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 12548801 - 12548875
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  12548801 gactcatcaaactccccaacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaata 12548875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 20108588 - 20108516
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| || |||||||||||    
T  20108588 gactcatcaaactcccccacacttgaatcttttattgtcctcaagcaaaagacataaacatagtagcataaaa 20108516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 4461238 - 4461309
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  4461238 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggcagcataaa 4461309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 9583112 - 9583045
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  9583112 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 9583045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 13658085 - 13658014
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| ||||    
T  13658085 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatcaacatggtagcgtaaa 13658014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 14551318 - 14551251
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  14551318 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 14551251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 16119845 - 16119900
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16119845 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 16119900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 23515286 - 23515219
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  23515286 gactcatgaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 23515219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 18593348 - 18593416
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  18593348 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 18593416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 18618336 - 18618268
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  18618336 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 18618268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 825843 - 825788
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  825843 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 825788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 8718084 - 8718017
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| || ||||||    
T  8718084 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcataaacatagtagca 8718017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 8780932 - 8781003
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || | ||||||||    
T  8780932 gactcatcaaactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataaa 8781003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 14221714 - 14221769
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14221714 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 14221769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 15916772 - 15916827
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15916772 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15916827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 18287821 - 18287766
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18287821 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 18287766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 27291556 - 27291501
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27291556 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 27291501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 9004165 - 9004099
Alignment:
Q  61 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||||||||    
T  9004165 tcaaactcccccacacttgaatctttgtttgtcctcaagcaaaaggcataaacatagtagcataaaa 9004099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 15065988 - 15065938
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15065988 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 15065938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 9264936 - 9265005
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || | |||||||    
T  9264936 actcatcaaactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataa 9265005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 12567233 - 12567168
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtag 120  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||    
T  12567233 gactcatcaaactcccccacacttgaatttttgcttgtcctcaagcaaaatgcataaacatggtag 12567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 13674075 - 13674018
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  13674075 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaa 13674018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 5397335 - 5397280
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  5397335 gactcatcaaactcccctacacttgaatctttgcttgtcctcaagcaaaaggcata 5397280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 9194540 - 9194599
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaata 114  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  9194540 gactcatcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaata 9194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 15206580 - 15206635
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15206580 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcata 15206635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 48801772 - 48801827
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  48801772 gactgatcaaactcccccacacttgaatcttttcttgtcctcaagcaaaaggcata 48801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 4791378 - 4791424
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagca 101  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||    
T  4791378 gacttatcaaactcccccatacttgaatctttgcttgtcctcaagca 4791424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 6713072 - 6713121
Alignment:
Q  63 aaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  6713072 aaactcccctatacttgaatctttgcttgtcctcaagcaaaaggcataaa 6713121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 15348592 - 15348535
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||| |||||||| ||||| ||||||||||||| ||||||||||| ||||| ||||||    
T  15348592 gacttatcaaacttccccaaacttgaatctttgtttgtcctcaagtaaaaggcataaa 15348535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 15522577 - 15522520
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||||| |||||  | ||||||||||||||||||||||||| ||||| ||||||    
T  15522577 gactcatcaagctcccatatacttgaatctttgcttgtcctcaagtaaaaggcataaa 15522520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 15940773 - 15940731
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 102  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15940773 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 15940731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 1320 - 1248
Alignment:
Q  57 ctcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  1320 ctcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaata 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 8873 - 8801
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8873 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaa 8801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 20038977 - 20039048
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  20038977 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 20039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 16418616 - 16418690
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  16418616 gactcatcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatggtagcataaaata 16418690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 21939992 - 21940066
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  21939992 gactcatcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatggtagcataaaata 21940066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 17620965 - 17620894
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  17620965 gactcatcaaactcccccacacttgaatttttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 17620894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 21098790 - 21098857
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21098790 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 21098857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 21104111 - 21104178
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21104111 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 21104178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 21843520 - 21843587
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21843520 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 21843587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 14352168 - 14352237
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14352168 gactcatcaaactccc--acacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaa 14352237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 21831236 - 21831181
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21831236 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 21831181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 22033551 - 22033606
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22033551 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 22033606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 22099651 - 22099706
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22099651 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 22099706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 8314687 - 8314619
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  8314687 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 8314619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 20712653 - 20712581
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  20712653 gactcatcaaactcccctacacttaaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 20712581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 21538769 - 21538697
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  21538769 gactcatcaaaatcccccacacttaaatttttgcttgtcctcaagcaaaaggcataaacatggtagcataaaa 21538697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 11346949 - 11347004
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11346949 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 11347004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 19767744 - 19767689
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19767744 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 19767689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 20002334 - 20002279
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20002334 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 20002279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 21382313 - 21382246
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||    
T  21382313 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 21382246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 22370162 - 22370107
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22370162 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 22370107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 23911659 - 23911592
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||    
T  23911659 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 23911592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 24034234 - 24034167
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||    
T  24034234 gactcatcaaactcccccacacttgaatctttgcttgtccacaagcaaaaggcataaacatagtagca 24034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 22817809 - 22817755
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22817809 actcatcaaactcccccacacttgaatctttgcttttcctcaagcaaaagacata 22817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 8322842 - 8322910
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  8322842 gactcatcaaactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 8322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 23455158 - 23455086
Alignment:
Q  55 gactcatcaaactccccc-acacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| || ||||||||||    
T  23455158 gactcatcaaactccccccacacttgaatctttgcttgtcctcgagcaaaaggcataaacatagtagcataaa 23455086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 22102612 - 22102557
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  22102612 gactcatcaaactcccctacacttgaatctttgcttgtcctcaagcaaaaggcata 22102557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 18572972 - 18573022
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    |||| |||||||||||||| |||||||| ||| |||||||| |||||||||    
T  18572972 gacttatcaaactcccccatacttgaattttttcttgtccttaagcaaaag 18573022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 19902174 - 19902216
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 102  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  19902174 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 19902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 1044 - 974
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  1044 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 58624 - 58698
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  58624 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagtaaaaggcataaacatggtagcataaaata 58698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 97722 - 97796
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  97722 gactcatcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaggcataaacatggtagcataaaata 97796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 121166 - 121092
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  121166 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaata 121092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 2181273 - 2181201
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  2181273 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 2181201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 18854230 - 18854159
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  18854230 gactcatcaaactcccccatacttgaatcttttcttgtcctcaagcaaaaggcataaatatggtagcataaa 18854159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 23023306 - 23023236
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  23023306 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagtcttaaacatggtagcataa 23023236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 18184873 - 18184941
Alignment:
Q  58 tcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  18184873 tcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 18184941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 18448353 - 18448281
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||| ||||    
T  18448353 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacttggtagcacaaaa 18448281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 21560553 - 21560621
Alignment:
Q  58 tcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  21560553 tcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 21560621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 15699774 - 15699707
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  15699774 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 15699707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 22165545 - 22165612
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  22165545 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22165612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 22244031 - 22243964
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  22244031 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22243964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 29595908 - 29595837
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  29595908 gactcatcaaactccctcacacttgaatctttgcttgtcctcaagcaaaaagcataaacatggtagcataaa 29595837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 25963461 - 25963391
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||    
T  25963461 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataa 25963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 25968108 - 25968038
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||    
T  25968108 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataa 25968038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 30671803 - 30671873
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||    
T  30671803 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataa 30671873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 20170462 - 20170394
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  20170462 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 20170394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 24855241 - 24855309
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  24855241 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 24855309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 20107784 - 20107847
Alignment:
Q  63 aaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  20107784 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaa 20107847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 22061499 - 22061566
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||    
T  22061499 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22061566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 25625903 - 25625832
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||   |||| |||||||||||||    
T  25625903 gactcatcaaactcccccatacttgaatttttgcttgtcctcaagcaaaaggtgtaaacatggtagcataaa 25625832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 35271032 - 35270977
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  35271032 gactcatcaaacacccccacacttgaatctttgcttgtcctcaagcaaaaggcata 35270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 22767115 - 22767169
Alignment:
Q  58 tcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  22767115 tcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaa 22767169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 25631266 - 25631332
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||  |||||| |||||||||    
T  25631266 actcatcaaactcccccacacttgaatctttgcttgtcctcaggaaaaatgcataaacatggtagca 25631332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 20218977 - 20219049
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||| |||||| || | |||||||||    
T  20218977 gactcatcaaactcccccacacatgaatctttgcttctcttcaagcaaaaggcataaacatagcagcataaaa 20219049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 22113002 - 22113074
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||| |||||| || | |||||||||    
T  22113002 gactcatcaaactcccccacacatgaatctttgcttctcttcaagcaaaaggcataaacatagcagcataaaa 22113074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 11204064 - 11204009
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  11204064 gactcatcaaactcccccacacttaaatatttgcttgtcctcaagcaaaaggcata 11204009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 18731935 - 18731880
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  18731935 gactcatcaaactcctccacacttgaatcttagcttgtcctcaagcaaaaggcata 18731880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 29686661 - 29686604
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||| || ||||||    
T  29686661 gactcatcaaactctcccatacttgaatcttttcttgtcctcaagcaagaggcataaa 29686604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 23517835 - 23517882
Alignment:
Q  63 aaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  23517835 aaactcccccatacttgaatctttgcttatcctcaagcaaaaggcata 23517882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 2284 - 2355
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  2284 actcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaa 2355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 35100 - 35171
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||    
T  35100 gactcatcaaactcccccacacttgaatctttccttgtcctcaagcaaaaggcataaacatggtagcataaa 35171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 432 - 361
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  432 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 11268 - 11197
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  11268 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 11197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 52938618 - 52938689
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  52938618 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataatcatggtagcataaaa 52938689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 3990158 - 3990086
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  3990158 gactcatcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaacatggtagcataaaa 3990086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 17094597 - 17094665
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  17094597 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 17094665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 20237675 - 20237617
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20237675 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaat 20237617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 27047093 - 27047027
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||    
T  27047093 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagc 27047027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 14070724 - 14070656
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  14070724 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 14070656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 21798658 - 21798726
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  21798658 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 21798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 8653335 - 8653268
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  8653335 gactcattaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 8653268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 19364248 - 19364199
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19364248 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 19364199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 19875640 - 19875697
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19875640 gactcattaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaa 19875697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 8947511 - 8947566
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  8947511 gactcatcaaactcccccacacttgaatctttacttgtcctcaaggaaaagacata 8947566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 21784468 - 21784523
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  21784468 gactcatcaaactcccccacacttgaatatttgcttgtcctcaagcaaaaggcata 21784523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 4027899 - 4027844
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  4027899 gactcatcaaactcccccacccttgaatctttgcttttcctcaagcaaaaggcata 4027844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 16382578 - 16382621
Alignment:
Q  62 caaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  16382578 caaactcccccatacttgaatctttgcttgtcctcaagcaaaag 16382621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 18478234 - 18478276
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 102  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  18478234 atcaaactcccctacacttgaaccattgcttgtcctcaagcaa 18478276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20444835 - 20444909
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaata 129  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  20444835 gactcattaaactcccccacacttgaatctttgattgtcctcaagcaaaaggcataaatatggtagcacaaaata 20444909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 24219965 - 24219893
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| ||||    
T  24219965 gactcatcaaactcccccacacttgagtctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 24219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 15735753 - 15735686
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  15735753 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 15735686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 20595827 - 20595894
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  20595827 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 20595894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 20602113 - 20602180
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  20602113 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 20602180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 20608404 - 20608471
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  20608404 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 20608471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 23600632 - 23600699
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  23600632 gactcatcaaattcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 23600699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 18073119 - 18073051
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  18073119 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 18073051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 20790710 - 20790778
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  20790710 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 20790778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 23748270 - 23748202
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  23748270 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 23748202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 24940753 - 24940685
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  24940753 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 24940685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 22317509 - 22317564
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22317509 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 22317564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 22855783 - 22855728
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22855783 gactcatgaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 22855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 25006804 - 25006859
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25006804 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 25006859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 30759651 - 30759706
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30759651 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 30759706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 25116167 - 25116217
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25116167 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 25116217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 25175257 - 25175306
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25175257 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25175306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 24953170 - 24953238
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || |||||||    
T  24953170 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggtataaacatagtagcat 24953238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 18484208 - 18484263
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  18484208 gactcatcaaactccccaacacttgaatctttgcttgtcctcaagcaaaaggcata 18484263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 26847863 - 26847808
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26847863 gactcatcaaactcccccacacttgaatctttgcttgtcctcaaccaaaaggcata 26847808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 21387609 - 21387560
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21387609 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagaaaaa 21387560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 27270607 - 27270563
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  27270607 atcaaactcccccacacttgaatcattgcttgtcctcaagcaaaa 27270563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 20916452 - 20916507
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||| |||| ||||| |||| ||||||||||||||||| ||||    
T  20916452 gactcatcaaactcccctacacatgaatttttggttgtcctcaagcaaaaggcata 20916507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 20622359 - 20622313
Alignment:
Q  77 ttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcat 123  Q
    ||||||||||||||||||||||||||||| |||||| || |||||||    
T  20622359 ttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 20622313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 17412789 - 17412739
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    |||| |||||||||||||| ||||||||| ||| ||||| |||||||||||    
T  17412789 gacttatcaaactcccccatacttgaatcattgtttgtcgtcaagcaaaag 17412739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 506 - 578
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  506 gactcatcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaatatagtagcataaaa 578  T

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Target: scaffold0096 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 38504 - 38576
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||    
T  38504 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaagcataaacatggtagcacaaaa 38576  T

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Target: scaffold0011 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 164399 - 164471
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||    
T  164399 gactcatcaaactcccccacacttgaatctttgcttatcctcaagcaaaaggcataaacatggtagcacaaaa 164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 162062 - 162007
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  162062 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 162007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 172321 - 172250
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||    
T  172321 gacttatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcataaa 172250  T

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Target: scaffold0679 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 8153 - 8082
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||||||    
T  8153 gactcatcaaactcccccacacttgaatctttgcttgtcttcaagcaaaaggcataaacacggtagcataaa 8082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 10202 - 10269
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10202 gactcatcaaactcccccaaacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 14658 - 14729
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  14658 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagaaaaaggcataaacatggtagcataaa 14729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 15897 - 15830
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  15897 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 15830  T

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Target: scaffold0215 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 611 - 678
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  611 gactcatcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaagcataaatatggtagca 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 123588 - 123521
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  123588 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 123521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 77391 - 77433
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 102  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  77391 atcaaactcccctacacttgaaccattgcttgtcctcaagcaa 77433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 2848 - 2920
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  2848 gactcatcaaactcccacatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 2920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 251866 - 251938
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaaa 127  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| ||||||||| ||||    
T  251866 gactcatcaaactcccccacacttgaatctttacttgtcctcaagcaaatggcataaacatggtagcacaaaa 251938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 1906 - 1835
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataaa 126  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| | ||||||||    
T  1906 gactcatcaaactcccccacacttgaatctttgattgttctcaagcaaaaggcataaatatagcagcataaa 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 974 - 919
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  974 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 2822 - 2767
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2822 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 2767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 5299 - 5244
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5299 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 5244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 12798 - 12743
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12798 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 12743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 42304 - 42249
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42304 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 42249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 50502 - 50557
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50502 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 50557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 88361 - 88403
Alignment:
Q  60 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 102  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  88361 atcaaactcccctacacttgaaccattgcttgtcctcaagcaa 88403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 691 - 642
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  691 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 3528 - 3471
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  3528 gactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaa 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 1257 - 1200
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  1257 gactcatcaaactcccccatacttgaatctttgcttttcctcaagcaaaaggcataaa 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 22822 - 22774
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22822 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaa 22774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 10780 - 10725
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  10780 gactcatcaaactcccccacactttaatctttgcttgtcctcaagcaaaaggcata 10725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 22151 - 22206
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22151 gactcattaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 22206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 45224 - 45279
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  45224 gactcatcaaactcccccacacctgaatctttgcttgttctcaagcaaaagacata 45279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 54845 - 54900
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacata 110  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  54845 gactcatcaaactcccccacgcttgaatctttgcttgtcctcaagcaaaaggcata 54900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 12615 - 12548
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||||    
T  12615 gactcgtcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagca 12548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 232783 - 232850
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagca 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||||    
T  232783 gactcgtcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagca 232850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 12998 - 13068
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaatatggtagcataa 125  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| || || |||||| || |||||||||    
T  12998 gactcatcaaactccgccacacttgaatctttgcttgtcctcaagtaagaggcataaacatagtagcataa 13068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 37739 - 37789
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37739 gactcatcaaattcccccacacttgaatctttgcttgtcctcaagcaaaag 37789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 18266 - 18218
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18266 actcatcaaactcccccacacttgaatctttgcttgtcctcaagaaaaa 18218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 1253 - 1196
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  1253 gacttatcaaactcccccatacttgaatctttgcttgtccacaagcaaaaggcataaa 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 37930 - 37873
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  37930 gactcattaaactcccccacacttgaatcttttcttgccctcaagcaaaagccataaa 37873  T

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Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 72569 - 72618
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  72569 actcatcaaactcccccacacttgaatctttacttttcctcaagcaaaag 72618  T

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Target: scaffold0037; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 84759 - 84808
Alignment:
Q  56 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaag 105  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  84759 actcatcaaactcccccacacttgaatctttacttttcctcaagcaaaag 84808  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 83154 - 83211
Alignment:
Q  55 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaa 112  Q
    ||||||| ||| ||||| | |||||||| |||||||||||||||||||||| ||||||    
T  83154 gactcattaaaatcccctatacttgaatatttgcttgtcctcaagcaaaaggcataaa 83211  T

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Target: scaffold0226 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 3291 - 3251
Alignment:
Q  62 caaactcccccacacttgaatctttgcttgtcctcaagcaa 102  Q
    |||||||||| ||||||||| | ||||||||||||||||||    
T  3291 caaactcccctacacttgaaccgttgcttgtcctcaagcaa 3251  T

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