View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1690_high_58 (Length: 254)
Name: NF1690_high_58
Description: NF1690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1690_high_58 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 47735666 - 47735896
Alignment:
| Q |
8 |
gagtgagatgaaaataggtgacaaatgctgctagagaggagacagaacattgaaccacctaagaagacaaagaatggccaccttgctataacaaattcca |
107 |
Q |
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| T |
47735666 |
gagtgacatgaaaataggtgacaaatgctgctagagaggagacagaacattgaaccacctaagaagacaaagaatggccaccttgctataacaaattcca |
47735765 |
T |
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| Q |
108 |
aggattcaacttccattgtcaatggtaattgatggtttaaatcaaagagtaacgccgttccctgcaaattcttacattgtcagtactaaaaatgaaatcc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47735766 |
aggattcaacttccattgtcaatggtaattgatggtttaaatcaaagagtaacgccgttccctgcaaattcttacattgtcagtactaaaaatgaaatcc |
47735865 |
T |
|
| Q |
208 |
gttcataatttcgttgctaagtgttacatat |
238 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
47735866 |
gttcataatttcgttgctaagtgttacatat |
47735896 |
T |
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