View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1690_high_85 (Length: 213)
Name: NF1690_high_85
Description: NF1690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1690_high_85 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 43103126 - 43102933
Alignment:
| Q |
21 |
tttaaaatcatatt-gtcttcttcccctaacaagacaaacataatcatggagcaagtgcatttggtaagtgaccacaccaaaccaaatacatgttccttt |
119 |
Q |
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| T |
43103126 |
tttaaaatcatatttgtcttcttcccctaacaagacaaacataatcatggagcaagtgcatttggtaagtgactacaccaaaccaaatacatgttccttt |
43103027 |
T |
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| Q |
120 |
tcaaccatcatggaagaaatgaaatccctaatgatgcttgcttttccaatagccataacagctcttattttctactctcgttccatggtgtcca |
213 |
Q |
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| T |
43103026 |
tcaaccatcatggaagaaatgaaatccctaatgatgcttgcttttccaatagccataacagctcttattttctattctcgttccatggtgtcca |
43102933 |
T |
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