View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1691-Insertion-9 (Length: 306)

Name: NF1691-Insertion-9
Description: NF1691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1691-Insertion-9
NF1691-Insertion-9
[»] chr3 (81 HSPs)
chr3 (6-238)||(23348151-23348382)
chr3 (34-195)||(23398095-23398252)
chr3 (239-306)||(4450280-4450347)
chr3 (237-306)||(9531113-9531182)
chr3 (238-306)||(16062936-16063004)
chr3 (238-306)||(19273974-19274042)
chr3 (239-306)||(1732471-1732538)
chr3 (239-306)||(4685064-4685131)
chr3 (239-306)||(4695148-4695215)
chr3 (239-306)||(4800662-4800729)
chr3 (239-306)||(4883566-4883633)
chr3 (239-306)||(8278463-8278530)
chr3 (239-306)||(8305388-8305455)
chr3 (239-306)||(8307272-8307339)
chr3 (239-306)||(14451051-14451118)
chr3 (239-306)||(15745176-15745243)
chr3 (239-306)||(16418772-16418839)
chr3 (239-306)||(28165442-28165509)
chr3 (239-306)||(35565790-35565857)
chr3 (239-306)||(35835182-35835249)
chr3 (239-306)||(35876829-35876896)
chr3 (239-306)||(35891899-35891966)
chr3 (237-299)||(11260467-11260529)
chr3 (237-306)||(4785821-4785890)
chr3 (241-306)||(15896835-15896900)
chr3 (238-306)||(8300510-8300578)
chr3 (239-306)||(10423605-10423673)
chr3 (238-306)||(15881653-15881721)
chr3 (238-306)||(17905600-17905668)
chr3 (238-306)||(22117477-22117545)
chr3 (238-306)||(34799004-34799072)
chr3 (239-306)||(2000325-2000392)
chr3 (239-306)||(3392999-3393066)
chr3 (239-306)||(4446122-4446189)
chr3 (239-306)||(4717742-4717809)
chr3 (239-306)||(4732921-4732988)
chr3 (239-306)||(4889352-4889419)
chr3 (239-306)||(5663296-5663363)
chr3 (239-306)||(6188425-6188492)
chr3 (239-306)||(6213180-6213247)
chr3 (239-306)||(8226153-8226220)
chr3 (239-306)||(8292034-8292101)
chr3 (239-306)||(12956560-12956627)
chr3 (239-306)||(18003676-18003743)
chr3 (239-306)||(18047327-18047394)
chr3 (239-306)||(18063390-18063457)
chr3 (239-306)||(18326782-18326849)
chr3 (239-306)||(19929047-19929114)
chr3 (239-306)||(22640924-22640991)
chr3 (239-306)||(26825485-26825552)
chr3 (239-306)||(27929999-27930066)
chr3 (239-306)||(28360308-28360375)
chr3 (239-306)||(33687398-33687465)
chr3 (239-306)||(37184101-37184168)
chr3 (238-306)||(14141137-14141205)
chr3 (238-306)||(32963673-32963741)
chr3 (239-306)||(5647874-5647941)
chr3 (239-306)||(9721612-9721679)
chr3 (239-306)||(10608875-10608942)
chr3 (239-306)||(11646405-11646472)
chr3 (239-306)||(12338658-12338725)
chr3 (239-306)||(28013692-28013759)
chr3 (243-306)||(31025111-31025174)
chr3 (237-306)||(29943231-29943300)
chr3 (237-306)||(29992385-29992454)
chr3 (238-306)||(19627221-19627289)
chr3 (238-306)||(36130792-36130860)
chr3 (239-306)||(15363462-15363529)
chr3 (239-306)||(15372138-15372205)
chr3 (239-306)||(16630592-16630659)
chr3 (239-306)||(18526452-18526519)
chr3 (239-306)||(18928758-18928825)
chr3 (239-306)||(19369356-19369423)
chr3 (239-306)||(19705515-19705582)
chr3 (239-298)||(48462059-48462118)
chr3 (239-298)||(48477818-48477877)
chr3 (238-292)||(5205717-5205771)
chr3 (237-306)||(23011213-23011282)
chr3 (237-306)||(29902065-29902134)
chr3 (239-299)||(15475308-15475368)
chr3 (232-292)||(17788430-17788490)
[»] scaffold0022 (2 HSPs)
scaffold0022 (7-195)||(160655-160838)
scaffold0022 (239-306)||(173408-173475)
[»] chr5 (54 HSPs)
chr5 (237-306)||(37651571-37651640)
chr5 (237-306)||(7816758-7816827)
chr5 (238-306)||(25503544-25503612)
chr5 (238-306)||(41302235-41302303)
chr5 (239-306)||(570177-570244)
chr5 (239-306)||(3944566-3944633)
chr5 (239-306)||(16683321-16683388)
chr5 (239-306)||(18084556-18084623)
chr5 (239-306)||(22987983-22988050)
chr5 (239-306)||(23003050-23003117)
chr5 (239-306)||(23578931-23578998)
chr5 (239-306)||(24692144-24692211)
chr5 (239-306)||(24948217-24948284)
chr5 (239-306)||(30930753-30930820)
chr5 (239-306)||(30957634-30957701)
chr5 (239-305)||(22446318-22446384)
chr5 (236-306)||(32448846-32448916)
chr5 (238-306)||(18060964-18061032)
chr5 (238-306)||(23430052-23430120)
chr5 (238-306)||(24981082-24981150)
chr5 (238-298)||(34496361-34496421)
chr5 (239-306)||(11546495-11546562)
chr5 (239-306)||(11560552-11560619)
chr5 (239-306)||(15495376-15495443)
chr5 (239-306)||(20193033-20193100)
chr5 (239-306)||(21662227-21662294)
chr5 (239-306)||(21665688-21665755)
chr5 (239-306)||(22348244-22348311)
chr5 (239-306)||(29881297-29881364)
chr5 (239-306)||(30912433-30912500)
chr5 (239-306)||(33788604-33788671)
chr5 (239-306)||(35395871-35395938)
chr5 (249-306)||(23721974-23722031)
chr5 (239-306)||(25196200-25196267)
chr5 (239-306)||(25211555-25211622)
chr5 (239-306)||(25275707-25275774)
chr5 (239-306)||(28888872-28888939)
chr5 (239-306)||(34493834-34493901)
chr5 (239-306)||(35870772-35870839)
chr5 (238-306)||(21501850-21501918)
chr5 (239-306)||(19863226-19863293)
chr5 (239-306)||(21396111-21396178)
chr5 (239-306)||(22268238-22268305)
chr5 (239-306)||(22899607-22899674)
chr5 (239-306)||(23902967-23903034)
chr5 (239-306)||(24671256-24671323)
chr5 (239-306)||(24708032-24708099)
chr5 (239-306)||(24741026-24741093)
chr5 (239-306)||(24753795-24753862)
chr5 (239-306)||(30465109-30465176)
chr5 (239-306)||(33773649-33773716)
chr5 (239-306)||(37285290-37285357)
chr5 (238-299)||(26868079-26868140)
chr5 (237-306)||(27285042-27285111)
[»] scaffold1497 (1 HSPs)
scaffold1497 (239-306)||(1207-1274)
[»] scaffold0131 (1 HSPs)
scaffold0131 (239-306)||(25950-26017)
[»] chr6 (67 HSPs)
chr6 (239-306)||(30968652-30968719)
chr6 (238-306)||(29628877-29628945)
chr6 (239-306)||(27292253-27292320)
chr6 (239-306)||(24874850-24874917)
chr6 (239-306)||(27279591-27279658)
chr6 (238-306)||(13681278-13681346)
chr6 (238-306)||(17759494-17759562)
chr6 (238-306)||(22923168-22923236)
chr6 (238-306)||(27647222-27647290)
chr6 (238-301)||(3044191-3044254)
chr6 (239-306)||(7585823-7585890)
chr6 (239-306)||(12622068-12622135)
chr6 (239-306)||(16766973-16767040)
chr6 (239-306)||(18814344-18814411)
chr6 (239-306)||(19899921-19899988)
chr6 (239-306)||(21939285-21939352)
chr6 (239-306)||(22938882-22938949)
chr6 (239-306)||(23861327-23861394)
chr6 (239-306)||(24294625-24294692)
chr6 (239-306)||(24308643-24308710)
chr6 (239-306)||(26996164-26996231)
chr6 (239-306)||(31542211-31542278)
chr6 (237-306)||(13288010-13288079)
chr6 (237-306)||(22476881-22476950)
chr6 (238-306)||(15401384-15401452)
chr6 (238-306)||(15413171-15413239)
chr6 (238-306)||(15428765-15428833)
chr6 (239-306)||(13302979-13303046)
chr6 (239-306)||(16344699-16344766)
chr6 (239-306)||(16746003-16746070)
chr6 (239-306)||(16764405-16764472)
chr6 (239-306)||(17493144-17493211)
chr6 (239-306)||(18947144-18947211)
chr6 (239-306)||(20156882-20156949)
chr6 (239-306)||(20179715-20179782)
chr6 (239-306)||(22156209-22156276)
chr6 (239-306)||(22175883-22175950)
chr6 (239-306)||(25842688-25842755)
chr6 (239-306)||(26985223-26985290)
chr6 (239-306)||(27030482-27030549)
chr6 (239-306)||(27036286-27036353)
chr6 (239-306)||(32780618-32780685)
chr6 (248-306)||(26503346-26503404)
chr6 (249-306)||(16566189-16566246)
chr6 (236-292)||(21791253-21791309)
chr6 (238-306)||(27214094-27214162)
chr6 (238-306)||(27235066-27235134)
chr6 (239-306)||(4751405-4751472)
chr6 (239-306)||(4769162-4769229)
chr6 (239-306)||(4784320-4784387)
chr6 (239-306)||(20135177-20135244)
chr6 (239-306)||(22197625-22197692)
chr6 (239-306)||(25180151-25180218)
chr6 (239-306)||(27306393-27306460)
chr6 (238-306)||(15996979-15997047)
chr6 (238-306)||(20425162-20425230)
chr6 (239-306)||(924921-924988)
chr6 (239-306)||(8723897-8723964)
chr6 (239-306)||(8766043-8766110)
chr6 (239-306)||(12963214-12963281)
chr6 (239-306)||(15740841-15740908)
chr6 (239-306)||(17086111-17086178)
chr6 (239-306)||(24377384-24377451)
chr6 (239-306)||(25807282-25807349)
chr6 (239-306)||(28196546-28196613)
chr6 (236-306)||(30720100-30720170)
chr6 (238-306)||(16238639-16238707)
[»] chr7 (54 HSPs)
chr7 (239-306)||(6222512-6222579)
chr7 (239-306)||(6179532-6179599)
chr7 (239-306)||(48217815-48217882)
chr7 (237-306)||(4186978-4187047)
chr7 (238-306)||(11413750-11413818)
chr7 (239-306)||(4949022-4949089)
chr7 (239-306)||(5246902-5246969)
chr7 (239-306)||(5801337-5801404)
chr7 (239-306)||(10920829-10920896)
chr7 (239-306)||(11428734-11428801)
chr7 (239-306)||(13735528-13735595)
chr7 (239-306)||(16497982-16498049)
chr7 (239-306)||(18458977-18459044)
chr7 (239-306)||(18627649-18627716)
chr7 (239-306)||(20593370-20593437)
chr7 (239-306)||(35972630-35972697)
chr7 (239-306)||(35994042-35994109)
chr7 (239-306)||(39861587-39861654)
chr7 (239-304)||(18623812-18623877)
chr7 (238-306)||(2165887-2165955)
chr7 (238-306)||(11361915-11361983)
chr7 (238-306)||(14929264-14929332)
chr7 (238-306)||(15352730-15352798)
chr7 (238-306)||(15918116-15918184)
chr7 (238-306)||(18430618-18430686)
chr7 (237-305)||(36878512-36878580)
chr7 (111-195)||(39635314-39635397)
chr7 (239-306)||(2150676-2150743)
chr7 (239-306)||(2969570-2969637)
chr7 (239-306)||(2971142-2971209)
chr7 (239-306)||(5169387-5169454)
chr7 (239-306)||(14224918-14224985)
chr7 (239-306)||(16522393-16522460)
chr7 (239-306)||(17079370-17079437)
chr7 (239-306)||(18138414-18138481)
chr7 (239-306)||(26749318-26749385)
chr7 (249-306)||(16507299-16507356)
chr7 (237-306)||(30309063-30309132)
chr7 (238-306)||(4779160-4779228)
chr7 (239-291)||(23957114-23957166)
chr7 (248-306)||(16453938-16453996)
chr7 (239-306)||(7369899-7369966)
chr7 (239-306)||(10838754-10838821)
chr7 (239-306)||(10852484-10852551)
chr7 (239-306)||(13894656-13894723)
chr7 (239-306)||(15004101-15004168)
chr7 (239-306)||(16438991-16439058)
chr7 (239-306)||(23231438-23231505)
chr7 (239-306)||(23765775-23765842)
chr7 (239-306)||(34195146-34195213)
chr7 (239-306)||(34195495-34195562)
chr7 (239-299)||(4055966-4056026)
chr7 (238-306)||(13181721-13181789)
chr7 (238-306)||(30241068-30241136)
[»] scaffold0774 (1 HSPs)
scaffold0774 (234-306)||(78-150)
[»] chr8 (42 HSPs)
chr8 (239-306)||(25052898-25052965)
chr8 (238-306)||(18801748-18801816)
chr8 (239-306)||(2126149-2126216)
chr8 (239-306)||(2141306-2141373)
chr8 (239-306)||(16265060-16265127)
chr8 (239-306)||(16273641-16273708)
chr8 (239-306)||(19649813-19649880)
chr8 (239-306)||(19660858-19660925)
chr8 (239-306)||(19665272-19665339)
chr8 (238-306)||(556237-556305)
chr8 (239-299)||(21376583-21376643)
chr8 (238-298)||(22382222-22382282)
chr8 (239-306)||(4819770-4819837)
chr8 (239-306)||(5515800-5515867)
chr8 (239-306)||(12479387-12479454)
chr8 (239-306)||(14024612-14024679)
chr8 (239-306)||(14358843-14358910)
chr8 (239-306)||(14553726-14553793)
chr8 (239-306)||(15211071-15211138)
chr8 (239-306)||(16253721-16253788)
chr8 (239-306)||(17903840-17903907)
chr8 (239-306)||(18692740-18692807)
chr8 (239-306)||(27597891-27597958)
chr8 (239-306)||(27612943-27613010)
chr8 (239-306)||(28263626-28263693)
chr8 (239-306)||(29037528-29037595)
chr8 (239-306)||(30366573-30366640)
chr8 (239-306)||(31338947-31339014)
chr8 (239-306)||(33242948-33243015)
chr8 (239-292)||(21336622-21336675)
chr8 (239-306)||(21966153-21966220)
chr8 (239-306)||(22070181-22070248)
chr8 (239-306)||(22144069-22144136)
chr8 (236-306)||(1690388-1690458)
chr8 (248-306)||(33272293-33272351)
chr8 (239-299)||(24460719-24460779)
chr8 (239-306)||(15018698-15018765)
chr8 (239-306)||(15325108-15325175)
chr8 (239-306)||(15505477-15505544)
chr8 (236-306)||(19905898-19905968)
chr8 (248-306)||(22087036-22087094)
chr8 (248-306)||(29559285-29559343)
[»] chr1 (39 HSPs)
chr1 (239-306)||(8882217-8882284)
chr1 (236-306)||(26798735-26798805)
chr1 (238-306)||(20361636-20361704)
chr1 (238-306)||(20549206-20549274)
chr1 (238-306)||(21886349-21886417)
chr1 (238-306)||(46461055-46461123)
chr1 (238-306)||(48539996-48540064)
chr1 (239-306)||(4146777-4146844)
chr1 (239-306)||(18598777-18598844)
chr1 (239-306)||(20329183-20329250)
chr1 (239-306)||(20342727-20342794)
chr1 (239-306)||(21086798-21086865)
chr1 (239-306)||(22080241-22080308)
chr1 (239-306)||(24655508-24655575)
chr1 (239-306)||(34497251-34497318)
chr1 (237-306)||(18294216-18294285)
chr1 (249-306)||(20320752-20320809)
chr1 (238-306)||(47662388-47662456)
chr1 (239-306)||(9178613-9178680)
chr1 (239-306)||(13105351-13105418)
chr1 (239-306)||(13575330-13575397)
chr1 (239-306)||(17850670-17850737)
chr1 (239-306)||(21482190-21482257)
chr1 (239-306)||(21644707-21644774)
chr1 (239-306)||(16406345-16406412)
chr1 (239-306)||(37884328-37884395)
chr1 (237-299)||(28161152-28161214)
chr1 (237-306)||(31446982-31447051)
chr1 (238-306)||(16231300-16231368)
chr1 (239-299)||(28150678-28150738)
chr1 (239-306)||(5138391-5138458)
chr1 (255-306)||(15434825-15434876)
chr1 (239-306)||(16197044-16197111)
chr1 (239-306)||(16212053-16212120)
chr1 (239-306)||(20457206-20457273)
chr1 (239-306)||(20490211-20490278)
chr1 (239-306)||(21732129-21732196)
chr1 (236-306)||(14956651-14956721)
chr1 (238-306)||(13480373-13480441)
[»] scaffold0170 (1 HSPs)
scaffold0170 (237-306)||(3988-4057)
[»] chr2 (41 HSPs)
chr2 (237-306)||(27688534-27688603)
chr2 (238-306)||(13065748-13065816)
chr2 (238-306)||(17633176-17633244)
chr2 (238-306)||(26619710-26619778)
chr2 (239-306)||(4726816-4726883)
chr2 (239-306)||(12666561-12666628)
chr2 (239-306)||(20832198-20832265)
chr2 (239-306)||(20834018-20834085)
chr2 (239-306)||(37869696-37869763)
chr2 (239-306)||(39758082-39758149)
chr2 (239-306)||(40190755-40190822)
chr2 (239-306)||(40193569-40193636)
chr2 (240-306)||(12651639-12651705)
chr2 (238-306)||(8692052-8692120)
chr2 (238-306)||(27423470-27423538)
chr2 (238-306)||(32236016-32236084)
chr2 (239-306)||(5391382-5391449)
chr2 (239-306)||(22601408-22601475)
chr2 (239-306)||(23122115-23122182)
chr2 (239-306)||(23502464-23502531)
chr2 (239-306)||(26265052-26265119)
chr2 (239-306)||(28268820-28268887)
chr2 (239-306)||(28276154-28276221)
chr2 (239-306)||(30204794-30204861)
chr2 (239-306)||(34305718-34305785)
chr2 (239-306)||(40795620-40795687)
chr2 (248-306)||(26064600-26064658)
chr2 (238-306)||(18086370-18086438)
chr2 (239-306)||(27389104-27389171)
chr2 (239-306)||(27438517-27438584)
chr2 (251-306)||(28878312-28878367)
chr2 (251-306)||(28893524-28893579)
chr2 (239-306)||(34262919-34262986)
chr2 (248-306)||(19555935-19555993)
chr2 (251-306)||(15713037-15713092)
chr2 (239-306)||(18140584-18140651)
chr2 (239-306)||(29438669-29438736)
chr2 (239-306)||(30461776-30461843)
chr2 (237-306)||(10114920-10114989)
chr2 (238-306)||(19445671-19445739)
chr2 (255-299)||(27400172-27400216)
[»] scaffold1933 (1 HSPs)
scaffold1933 (238-306)||(1040-1108)
[»] scaffold0186 (1 HSPs)
scaffold0186 (238-306)||(12801-12869)
[»] chr4 (49 HSPs)
chr4 (238-306)||(17024080-17024148)
chr4 (239-306)||(5199309-5199376)
chr4 (239-306)||(9247149-9247216)
chr4 (239-306)||(14658111-14658178)
chr4 (239-306)||(14676192-14676259)
chr4 (239-306)||(17010115-17010182)
chr4 (239-306)||(18044616-18044683)
chr4 (239-306)||(19638933-19639000)
chr4 (235-306)||(20309526-20309597)
chr4 (239-306)||(22110928-22110995)
chr4 (239-306)||(34272475-34272542)
chr4 (239-306)||(39128501-39128568)
chr4 (239-306)||(40463476-40463543)
chr4 (239-306)||(40563673-40563740)
chr4 (239-306)||(4866241-4866308)
chr4 (239-306)||(5317723-5317790)
chr4 (247-306)||(6556685-6556744)
chr4 (239-306)||(11772515-11772582)
chr4 (239-306)||(13441742-13441809)
chr4 (239-306)||(14239390-14239457)
chr4 (239-306)||(14657758-14657825)
chr4 (239-306)||(15195569-15195636)
chr4 (239-306)||(30278960-30279027)
chr4 (239-306)||(34849149-34849216)
chr4 (239-305)||(15069228-15069294)
chr4 (239-305)||(16815614-16815680)
chr4 (243-306)||(8542297-8542360)
chr4 (239-306)||(15375581-15375648)
chr4 (239-306)||(15395405-15395472)
chr4 (239-290)||(16472509-16472560)
chr4 (239-306)||(26460763-26460830)
chr4 (238-306)||(15238905-15238973)
chr4 (238-306)||(17087667-17087735)
chr4 (238-306)||(17095642-17095710)
chr4 (238-306)||(26138149-26138217)
chr4 (239-306)||(1896391-1896458)
chr4 (239-306)||(1910601-1910668)
chr4 (239-306)||(15085518-15085585)
chr4 (239-306)||(15220150-15220217)
chr4 (239-306)||(17242315-17242382)
chr4 (239-306)||(22726894-22726961)
chr4 (239-306)||(26406303-26406370)
chr4 (248-306)||(12786218-12786276)
chr4 (248-306)||(15298844-15298902)
chr4 (249-306)||(16244386-16244443)
chr4 (239-292)||(46660838-46660891)
chr4 (238-306)||(1677784-1677852)
chr4 (238-306)||(15642549-15642617)
chr4 (239-299)||(39166335-39166395)
[»] scaffold0706 (1 HSPs)
scaffold0706 (239-306)||(83-150)
[»] scaffold0643 (1 HSPs)
scaffold0643 (239-306)||(1470-1537)
[»] scaffold0604 (1 HSPs)
scaffold0604 (239-306)||(9756-9823)
[»] scaffold0322 (1 HSPs)
scaffold0322 (235-306)||(18135-18206)
[»] scaffold0260 (1 HSPs)
scaffold0260 (239-306)||(5050-5117)
[»] scaffold0214 (1 HSPs)
scaffold0214 (239-306)||(16099-16166)
[»] scaffold0143 (1 HSPs)
scaffold0143 (239-306)||(23392-23459)
[»] scaffold0089 (3 HSPs)
scaffold0089 (239-306)||(10859-10926)
scaffold0089 (239-306)||(25901-25968)
scaffold0089 (239-306)||(51074-51141)
[»] scaffold0060 (1 HSPs)
scaffold0060 (239-306)||(24129-24196)
[»] scaffold0029 (1 HSPs)
scaffold0029 (239-306)||(4236-4303)
[»] scaffold0016 (1 HSPs)
scaffold0016 (239-306)||(208561-208628)
[»] scaffold0001 (2 HSPs)
scaffold0001 (239-306)||(72177-72244)
scaffold0001 (239-306)||(443445-443512)
[»] scaffold0061 (1 HSPs)
scaffold0061 (240-306)||(31340-31406)
[»] scaffold0017 (1 HSPs)
scaffold0017 (240-306)||(167386-167452)
[»] scaffold0231 (1 HSPs)
scaffold0231 (237-306)||(25738-25807)
[»] scaffold0145 (1 HSPs)
scaffold0145 (237-306)||(34698-34767)
[»] scaffold0597 (2 HSPs)
scaffold0597 (238-306)||(8782-8850)
scaffold0597 (239-298)||(1-60)
[»] scaffold0566 (1 HSPs)
scaffold0566 (238-306)||(24-92)
[»] scaffold0384 (1 HSPs)
scaffold0384 (238-306)||(16641-16709)
[»] scaffold0240 (1 HSPs)
scaffold0240 (238-306)||(19900-19968)
[»] scaffold2097 (1 HSPs)
scaffold2097 (239-306)||(525-592)
[»] scaffold1618 (1 HSPs)
scaffold1618 (239-306)||(1112-1179)
[»] scaffold1120 (1 HSPs)
scaffold1120 (239-298)||(1428-1487)
[»] scaffold0601 (1 HSPs)
scaffold0601 (239-306)||(6519-6586)
[»] scaffold0338 (1 HSPs)
scaffold0338 (239-306)||(11906-11973)
[»] scaffold0328 (1 HSPs)
scaffold0328 (239-306)||(19957-20024)
[»] scaffold0280 (1 HSPs)
scaffold0280 (239-306)||(22762-22829)
[»] scaffold0178 (1 HSPs)
scaffold0178 (239-306)||(26884-26951)
[»] scaffold0161 (2 HSPs)
scaffold0161 (239-306)||(14727-14794)
scaffold0161 (239-306)||(19400-19467)
[»] scaffold0125 (1 HSPs)
scaffold0125 (239-306)||(149-216)
[»] scaffold0124 (1 HSPs)
scaffold0124 (239-306)||(16515-16582)
[»] scaffold0112 (1 HSPs)
scaffold0112 (239-306)||(42367-42434)
[»] scaffold0034 (1 HSPs)
scaffold0034 (239-306)||(12000-12067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (239-306)||(105-172)
[»] scaffold0020 (1 HSPs)
scaffold0020 (239-306)||(145449-145516)
[»] scaffold0014 (1 HSPs)
scaffold0014 (239-306)||(220807-220874)
[»] scaffold0011 (1 HSPs)
scaffold0011 (239-306)||(190973-191040)
[»] scaffold0547 (1 HSPs)
scaffold0547 (239-305)||(4580-4646)
[»] scaffold0535 (1 HSPs)
scaffold0535 (239-305)||(6666-6732)
[»] scaffold1953 (1 HSPs)
scaffold1953 (238-299)||(1-62)
[»] scaffold0206 (1 HSPs)
scaffold0206 (238-306)||(13184-13252)
[»] scaffold0109 (2 HSPs)
scaffold0109 (238-306)||(31928-31996)
scaffold0109 (239-292)||(17699-17752)
[»] scaffold1957 (1 HSPs)
scaffold1957 (239-306)||(26-93)
[»] scaffold1121 (1 HSPs)
scaffold1121 (239-306)||(7-74)
[»] scaffold0530 (1 HSPs)
scaffold0530 (239-306)||(11398-11465)
[»] scaffold0174 (2 HSPs)
scaffold0174 (239-306)||(2883-2950)
scaffold0174 (239-306)||(9005-9072)
[»] scaffold0074 (1 HSPs)
scaffold0074 (239-306)||(11564-11631)
[»] scaffold0055 (1 HSPs)
scaffold0055 (235-306)||(6804-6875)
[»] scaffold0052 (1 HSPs)
scaffold0052 (235-306)||(77660-77731)
[»] scaffold0211 (1 HSPs)
scaffold0211 (237-306)||(10437-10506)
[»] scaffold0031 (2 HSPs)
scaffold0031 (237-306)||(120352-120421)
scaffold0031 (237-306)||(131229-131298)
[»] scaffold0184 (1 HSPs)
scaffold0184 (238-306)||(26886-26954)
[»] scaffold0134 (1 HSPs)
scaffold0134 (238-306)||(28122-28190)
[»] scaffold0078 (1 HSPs)
scaffold0078 (238-306)||(45890-45958)
[»] scaffold0521 (1 HSPs)
scaffold0521 (239-306)||(11870-11937)
[»] scaffold0413 (1 HSPs)
scaffold0413 (239-306)||(7591-7658)
[»] scaffold0352 (1 HSPs)
scaffold0352 (239-306)||(18201-18268)
[»] scaffold0181 (1 HSPs)
scaffold0181 (239-306)||(24240-24307)
[»] scaffold0122 (1 HSPs)
scaffold0122 (239-306)||(28273-28340)
[»] scaffold0068 (1 HSPs)
scaffold0068 (239-306)||(52758-52825)
[»] scaffold0053 (1 HSPs)
scaffold0053 (239-306)||(35512-35579)
[»] scaffold0049 (1 HSPs)
scaffold0049 (239-306)||(45013-45080)
[»] scaffold0043 (1 HSPs)
scaffold0043 (239-306)||(96054-96121)
[»] scaffold0021 (1 HSPs)
scaffold0021 (239-306)||(180755-180822)
[»] scaffold0393 (1 HSPs)
scaffold0393 (239-305)||(7728-7794)
[»] scaffold0196 (1 HSPs)
scaffold0196 (248-306)||(152-210)
[»] scaffold0476 (1 HSPs)
scaffold0476 (239-299)||(5-65)


Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 6 - 238
Target Start/End: Complemental strand, 23348382 - 23348151
Alignment:
Q  6 catgtccttcgtgaatgatgttgtaaaaatgtaagagaaactagacttttattgtagatatatagtttctactaaaaaatgtttgcaagttagcaatgtg 105  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23348382 catgtccttcgtgaatgatgttgtaaaaatgtaggagaaactagacttttattgtagatatatagtttctactaaaaaatgtttgcaagttagcgatgtg 23348283  T
Q  106 attctcaatcctactaaaattgaagtctatagagttatctcttttagcgtagtctcaacgttttcattgactaacttaggcatcaagttaacgtttatca 205  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23348282 attctcaatcctactaaaattgaagtctatagatttatctc-tttagcgtagtctcaacgttttcattgactaacttaggcatcaagttaacgtttatca 23348184  T
Q  206 ttaaccactaaaccaaatgttcatattgtaagg 238  Q
    ||||||||||||||||||||||| |||||||||    
T  23348183 ttaaccactaaaccaaatgttcagattgtaagg 23348151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 23398252 - 23398095
Alignment:
Q  34 atgtaagagaaactagactttt-attgtagatatatagtttctactaaaaaatgtttgcaagttagcaatgtgattctcaatcctactaaaattgaagtc 132  Q
    ||||| |||||||||||||||| ||||||||||    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23398252 atgtaggagaaactagactttttattgtagata----gtttctactaaaaaatgtttgcaagttagcgatgtgattctcaatcctactaaaattgaagtc 23398157  T
Q  133 tatagagttatctcttttagcgtagtctcaacgttttcattgactaacttaggcatcaagtta 195  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  23398156 tatagatttatctc-tttagggtagtctcaacgttttcattgacaaacttaggcatcaagtta 23398095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4450347 - 4450280
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  4450347 tgttatcgcgattttcgggtgtcaagtcaatgattaggcttgaacctttcaatctttgatattctcta 4450280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 9531182 - 9531113
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  9531182 ggtgttatcacgattttcgggtgtcaagtcattgattaggcttgaacctttcaatctttgataatctcta 9531113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 16062936 - 16063004
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16062936 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16063004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 19274042 - 19273974
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19274042 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19273974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 1732471 - 1732538
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1732471 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1732538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4685131 - 4685064
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4685131 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4685064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4695215 - 4695148
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4695215 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4695148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 4800662 - 4800729
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4800662 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4800729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4883633 - 4883566
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4883633 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4883566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 8278463 - 8278530
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8278463 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8278530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 8305388 - 8305455
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8305388 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8305455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 8307272 - 8307339
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8307272 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8307339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 14451051 - 14451118
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14451051 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14451118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15745176 - 15745243
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15745176 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15745243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16418772 - 16418839
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16418772 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16418839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 28165442 - 28165509
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  28165442 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 28165509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 35565790 - 35565857
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35565790 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 35835249 - 35835182
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35835249 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35835182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 35876896 - 35876829
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35876896 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 35891966 - 35891899
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35891966 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35891899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 11260467 - 11260529
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| ||||||    
T  11260467 ggtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgata 11260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 4785821 - 4785890
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| ||||||||||||||| |||| |  ||||||||||||||||||||| |||||| ||||||    
T  4785821 ggtgttatcgcgattttcgggtgtcaggtcattaattaggcttgaacctttcaatctttgatattctcta 4785890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 15896835 - 15896900
Alignment:
Q  241 ttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15896835 ttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15896900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 8300578 - 8300510
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  8300578 gtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 8300510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 10423673 - 10423605
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggtta-ggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| || ||  |||||||||||||||||| |||||||||||||    
T  10423673 tgttatcgcgattttcgggtgtcaagtcattgattttggcttgaacctttcaatctttgataatctcta 10423605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15881653 - 15881721
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||  |||||| ||||||    
T  15881653 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatttttgatattctcta 15881721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 17905668 - 17905600
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  17905668 gtgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 17905600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 22117477 - 22117545
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| | |||| ||||||    
T  22117477 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatcttcgatattctcta 22117545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 34799004 - 34799072
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  34799004 gtgttatcgcgattttcgggtgtcaaatcattaattaggcttgaacctttcaatctttgatattctcta 34799072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 2000392 - 2000325
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  2000392 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 2000325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 3393066 - 3392999
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  3393066 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 3392999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4446189 - 4446122
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  4446189 tgttatcgcgattttcgggtgtcaagtcatatattaggcttgaacctttcaatctttgatattctcta 4446122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4717809 - 4717742
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4717809 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4717742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4732988 - 4732921
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4732988 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4732921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4889419 - 4889352
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4889419 tgttatcgcaattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4889352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 5663363 - 5663296
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5663363 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5663296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 6188492 - 6188425
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  6188492 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 6188425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 6213247 - 6213180
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  6213247 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 6213180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 8226153 - 8226220
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  8226153 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 8226220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 8292101 - 8292034
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  8292101 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 8292034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 12956560 - 12956627
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  12956560 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 12956627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18003743 - 18003676
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18003743 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18003676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18047394 - 18047327
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18047394 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18047327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18063457 - 18063390
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18063457 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18063390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18326849 - 18326782
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18326849 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18326782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 19929114 - 19929047
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19929114 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 19929047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22640924 - 22640991
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||| ||||||||| |||||| ||||||    
T  22640924 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaatctttcaatctttgatattctcta 22640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 26825485 - 26825552
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  26825485 tgttatcgcgattttcgggtgtcaagtcattaattaggtttgaacctttcaatctttgatattctcta 26825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 27929999 - 27930066
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  27929999 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 27930066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 28360375 - 28360308
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  28360375 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 28360308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 33687465 - 33687398
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  |||||||||||||||||||||  ||||| ||||||    
T  33687465 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctctgatattctcta 33687398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 37184101 - 37184168
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  ||||||||| |||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  37184101 tgttatcacgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 37184168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 14141137 - 14141205
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  14141137 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 14141205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 32963673 - 32963741
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||  ||||||||||||||||| |||||| ||||||    
T  32963673 gtgttatcgcgattttcgggtgtcaagtcattaatttagcttgaacctttcaatctttgatattctcta 32963741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 5647941 - 5647874
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||| ||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5647941 tgttatcgcgattttcggatgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5647874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 9721612 - 9721679
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||| ||||||||||| |||||| ||||||    
T  9721612 tgttatcgcgattttcgggtgtcaagtcataaattaggcttggacctttcaatctttgatattctcta 9721679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 10608942 - 10608875
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||| ||||||    ||||||||||||||||||||| |||||| ||||||    
T  10608942 tgttatcgcgattttcgggtgttaagtcataaattaggcttgaacctttcaatctttgatattctcta 10608875  T

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Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11646405 - 11646472
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11646405 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11646472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 12338725 - 12338658
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| |||| |||||| | |  ||||||||||||||||||||| |||||||||||||    
T  12338725 tgttatcttgattttagggtatcaagttattaattaggcttgaacctttcaatctttgataatctcta 12338658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 28013759 - 28013692
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||| | |  || |||||||||||||||||| |||||| ||||||    
T  28013759 tgttatcgcgattttcgggtgtcaagttattaatttggcttgaacctttcaatctttgatattctcta 28013692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 31025111 - 31025174
Alignment:
Q  243 atcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  31025111 atcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 31025174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 29943300 - 29943231
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  29943300 ggtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 29943231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 29992454 - 29992385
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  29992454 ggtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 29992385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 19627221 - 19627289
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19627221 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 36130792 - 36130860
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  36130792 gtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 36130860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15363462 - 15363529
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15363462 tgttatcacgattttggggtatcaagtcattatttaggcttgaacctttcaatctttgatattctcta 15363529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15372205 - 15372138
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| |||| |||||||| |  ||||||||||||||| ||||| |||||| ||||||    
T  15372205 tgttatcatgattttggggtatcaagtcattaattaggcttgaaccttccaatctttgatattctcta 15372138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16630592 - 16630659
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16630592 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16630659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18526519 - 18526452
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18526519 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18526452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18928825 - 18928758
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18928825 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18928758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19369356 - 19369423
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| || |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19369356 tgttatctcgattttgggatgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19369423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 19705582 - 19705515
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19705582 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19705515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 48462118 - 48462059
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 298  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||| | |||||||    
T  48462118 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgat 48462059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 48477877 - 48477818
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 298  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||| | |||||||    
T  48477877 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgat 48477818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 5205771 - 5205717
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 292  Q
    |||||||| |||||||||||||||||| || || || | ||||||||||||||||    
T  5205771 gtgttatcttgattttcgggtgtcaagccattgattggacttgaacctttcaatc 5205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 23011213 - 23011282
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||  |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23011213 ggtgttatcacgatttcggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23011282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 29902134 - 29902065
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  29902134 ggtgttatcacgattttggggtatcaagtcattaattaggattgaacctttcaatctttgatattctcta 29902065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 15475308 - 15475368
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  15475308 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 15475368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 17788490 - 17788430
Alignment:
Q  232 tgtaaggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 292  Q
    |||||| |||||||  |||||| |||| |||||||| |  |||||||||||||||||||||    
T  17788490 tgtaagctgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatc 17788430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 160655 - 160838
Alignment:
Q  7 atgtccttcgtgaatgatgttgtaaaaatgtaagagaaactagacttttattgtagatatatagtttctactaaaaaatgtttgcaagttagcaatgtga 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||||||| ||||| | ||||||    
T  160655 atgtcctttgtgaatgatgttgtaaaaatgtaagagaaactagacatttattgtag----atagtttcttctaaaaaatgtttgcgagttatctatgtga 160750  T
Q  107 ttctcaatcctactaaaattgaagtctatagagttatctcttttagcgtagtctcaacgttttcattgactaacttaggcatcaagtta 195  Q
    ||||| |||||||||||||||||||  ||||| ||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||||    
T  160751 ttctcgatcctactaaaattgaagttaatagatttatctc-tttagggttgtctcgacgttttcattgaccaacttaggcatcaagtta 160838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 173475 - 173408
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  173475 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 173408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 37651640 - 37651571
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37651640 ggtgttatcgtgattttcgggtgtcaagtcaatgattaggcttgaacctttcaatcgttgataatctcta 37651571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 7816827 - 7816758
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  7816827 ggtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7816758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 25503544 - 25503612
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25503544 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25503612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 41302303 - 41302235
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  41302303 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 41302235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 570177 - 570244
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  570177 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 3944633 - 3944566
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  3944633 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 3944566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16683388 - 16683321
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16683388 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16683321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18084623 - 18084556
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18084623 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18084556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22987983 - 22988050
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22987983 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22988050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 23003050 - 23003117
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23003050 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23003117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 23578931 - 23578998
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23578931 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23578998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24692144 - 24692211
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24692144 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24692211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 24948284 - 24948217
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24948284 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24948217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 30930820 - 30930753
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30930820 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30930753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 30957701 - 30957634
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30957701 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30957634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 22446384 - 22446318
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 305  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| |||||    
T  22446384 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctct 22446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 32448846 - 32448916
Alignment:
Q  236 aggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  32448846 aggtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 32448916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 18060964 - 18061032
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18060964 gtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18061032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 23430052 - 23430120
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  23430052 gtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 23430120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 24981150 - 24981082
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  24981150 gtgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 24981082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 34496361 - 34496421
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 298  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  34496361 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 34496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 11546562 - 11546495
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  11546562 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 11546495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 11560619 - 11560552
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  11560619 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 11560552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15495443 - 15495376
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||| |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15495443 tgttatcgcgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15495376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 20193033 - 20193100
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||| |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20193033 tgttatcgcgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20193100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 21662294 - 21662227
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  21662294 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 21662227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 21665755 - 21665688
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  21665755 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 21665688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 22348311 - 22348244
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  22348311 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 22348244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 29881297 - 29881364
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| |||||||||||||||||| || |  ||||||||||||||||||||| |||||| ||||||    
T  29881297 tgttatcatgattttcgggtgtcaagccattaattaggcttgaacctttcaatctttgatattctcta 29881364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 30912433 - 30912500
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  |||||| |||||||||||||| |||||| ||||||    
T  30912433 tgttatcgcgattttcgggtgtcaagtcattaattaggcatgaacctttcaatctttgatattctcta 30912500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 33788671 - 33788604
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  33788671 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 33788604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 35395871 - 35395938
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  35395871 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 35395938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 23721974 - 23722031
Alignment:
Q  249 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23721974 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23722031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 25196267 - 25196200
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25196267 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 25211622 - 25211555
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25211622 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25211555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 25275774 - 25275707
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25275774 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 28888872 - 28888939
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  28888872 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 28888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 34493834 - 34493901
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| || ||||||||||||||||||||| |||||| ||||||    
T  34493834 tgttatcacgattttggggtatcaagtcattgattaggcttgaacctttcaatctttgatattctcta 34493901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 35870772 - 35870839
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  ||||||| |||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35870772 tgttatcacgattttcaggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35870839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 21501918 - 21501850
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21501918 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21501850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19863226 - 19863293
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19863226 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19863293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 21396178 - 21396111
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21396178 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21396111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22268238 - 22268305
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22268238 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22268305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 22899674 - 22899607
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22899674 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22899607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 23903034 - 23902967
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23903034 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23902967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24671256 - 24671323
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24671256 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24671323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24708032 - 24708099
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24708032 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24708099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24741026 - 24741093
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24741026 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24741093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24753795 - 24753862
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24753795 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24753862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 30465109 - 30465176
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30465109 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30465176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 33773716 - 33773649
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  || |||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  33773716 tgttatcgcaatgttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 33773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 37285290 - 37285357
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  37285290 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 37285357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 26868079 - 26868140
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  26868079 gtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 26868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 27285042 - 27285111
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  27285042 ggtgttatcacgattttggggtatcaagtcattaattaggattgaacctttcaatctttgatattctcta 27285111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1497 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1497
Description:

Target: scaffold1497; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 1207 - 1274
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  1207 tgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacctttcaatcgttgatagtctcta 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 26017 - 25950
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  26017 tgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacctttcaatcgttgatagtctcta 25950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 30968652 - 30968719
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  30968652 tgttatcgtgattttcgggtgtcaagtcaatagttaggcttgaacctttcaatctttgatattctcta 30968719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 29628945 - 29628877
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||    
T  29628945 gtgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacctttcaatctttgatattctcta 29628877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 27292253 - 27292320
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  27292253 tgttatcgcgattttcgggtgtcaagtcaatgattaggcttgaacctttcaatctttgatattctcta 27292320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 24874917 - 24874850
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||||||| |||||| ||||||    
T  24874917 tgttatcgcgattttcgggtgtcaagtcattgattaggcttgaacctttcaatctttgatattctcta 24874850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 27279591 - 27279658
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||||| ||||||    
T  27279591 tgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacttttcaatctttgatattctcta 27279658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 13681346 - 13681278
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13681346 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13681278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 17759494 - 17759562
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17759494 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17759562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 22923168 - 22923236
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22923168 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22923236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 27647290 - 27647222
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27647290 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27647222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 3044254 - 3044191
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataat 301  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| ||||||||    
T  3044254 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgataat 3044191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 7585890 - 7585823
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  7585890 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7585823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 12622135 - 12622068
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12622135 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12622068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16766973 - 16767040
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| |||||||||| |||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  16766973 tgttatcatgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 16767040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 18814344 - 18814411
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18814344 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18814411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19899921 - 19899988
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19899921 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19899988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 21939285 - 21939352
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21939285 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22938882 - 22938949
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22938882 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22938949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 23861327 - 23861394
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23861327 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23861394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24294625 - 24294692
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24294625 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24294692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24308643 - 24308710
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24308643 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24308710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 26996231 - 26996164
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26996231 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26996164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 31542278 - 31542211
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  31542278 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 31542211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 13288010 - 13288079
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| ||||||||||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13288010 ggtgttatcgcgattttcgggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13288079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 22476881 - 22476950
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22476881 ggtgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22476950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15401384 - 15401452
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  15401384 gtgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 15401452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15413171 - 15413239
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  15413171 gtgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 15413239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15428765 - 15428833
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  15428765 gtgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 15428833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 13302979 - 13303046
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13302979 tgttatcgcgattttcgggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13303046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16344699 - 16344766
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  16344699 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 16344766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16746070 - 16746003
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  16746070 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 16746003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16764472 - 16764405
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  16764472 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 16764405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 17493211 - 17493144
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  17493211 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 17493144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18947211 - 18947144
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18947211 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18947144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20156949 - 20156882
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20156949 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20156882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20179782 - 20179715
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20179782 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22156209 - 22156276
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22156209 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22156276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22175883 - 22175950
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22175883 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22175950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 25842688 - 25842755
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  25842688 tgttatcgcgattttcgggtgtcaagtcattattttggcttgaacctttcaatctttgatattctcta 25842755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 26985290 - 26985223
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  26985290 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26985223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 27030549 - 27030482
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||| |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27030549 tgttatcgcgattttcggttgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27030482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 27036353 - 27036286
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  27036353 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 27036286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 32780618 - 32780685
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  32780618 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 32780685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 26503404 - 26503346
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26503404 gattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 16566246 - 16566189
Alignment:
Q  249 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16566246 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16566189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 21791253 - 21791309
Alignment:
Q  236 aggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 292  Q
    ||||||||||| |||||| ||||||||||||| |  |||||||||||||||||||||    
T  21791253 aggtgttatcgcgatttttgggtgtcaagtcattaattaggcttgaacctttcaatc 21791309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 27214162 - 27214094
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    || |||||||||||||||||| |||||| ||||||    
T  27214162 gtgttatcgcgattttcgggtgtcaagtcataaatttggcttgaacctttcaatctttgatattctcta 27214094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 27235066 - 27235134
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    || |||||||||||||||||| |||||| ||||||    
T  27235066 gtgttatcgcgattttcgggtgtcaagtcataaatttggcttgaacctttcaatctttgatattctcta 27235134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 4751405 - 4751472
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| |||||||||| || |  || |||||||||||||| |||||||||||||||||    
T  4751405 tgttatcttgattttggggtgtcaagccattaattgggcttgaacctttcgatcgttgataatctcta 4751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4769229 - 4769162
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| |||||||||| || |  || |||||||||||||| |||||||||||||||||    
T  4769229 tgttatcttgattttggggtgtcaagccattaattgggcttgaacctttcgatcgttgataatctcta 4769162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4784387 - 4784320
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| |||||||||| || |  || |||||||||||||| |||||||||||||||||    
T  4784387 tgttatcttgattttggggtgtcaagccattaattgggcttgaacctttcgatcgttgataatctcta 4784320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20135244 - 20135177
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||| |||||| ||||||    
T  20135244 tgttatcttgattttggggtgtcaagtcattaattaggcttgaaccttttaatctttgatattctcta 20135177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22197625 - 22197692
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||| |||||| ||||||    
T  22197625 tgttatcttgattttggggtgtcaagtcattaattaggcttgaaccttttaatctttgatattctcta 22197692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 25180218 - 25180151
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  25180218 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 25180151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 27306393 - 27306460
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    || |||||||||||||||||| |||||| ||||||    
T  27306393 tgttatcgcgattttcgggtgtcaagtcataaatttggcttgaacctttcaatctttgatattctcta 27306460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 15997047 - 15996979
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15997047 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15996979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 20425230 - 20425162
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20425230 gtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20425162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 924988 - 924921
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  924988 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 924921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 8723964 - 8723897
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8723964 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8723897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 8766110 - 8766043
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8766110 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8766043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 12963214 - 12963281
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12963214 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12963281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15740841 - 15740908
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15740841 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 17086111 - 17086178
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17086111 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17086178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 24377451 - 24377384
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24377451 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 25807282 - 25807349
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25807282 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25807349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 28196546 - 28196613
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28196546 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28196613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 30720100 - 30720170
Alignment:
Q  236 aggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||  |||||| ||||||||||||| |  ||||  ||||||||||||||| |||||| ||||||    
T  30720100 aggtgttatcacgattttggggtgtcaagtcattaattagatttgaacctttcaatctttgatattctcta 30720170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 16238707 - 16238639
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| | |||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16238707 gtgttatcacgattttggggtatgaagtcattaattaggcttgaacctttcaatctttgatattctcta 16238639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 8e-21; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 6222512 - 6222579
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  6222512 tgttatcgcgattttcgggtgtcaagtcattgattaggcttgaacctttcaatctttgataatctcta 6222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 6179599 - 6179532
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  6179599 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 6179532  T

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Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 48217882 - 48217815
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  48217882 tgttatcgtgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 48217815  T

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Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 4187047 - 4186978
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4187047 ggtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4186978  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 11413750 - 11413818
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11413750 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11413818  T

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Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4949089 - 4949022
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||| || |  ||||||||||||||||||||| |||||||||||||    
T  4949089 tgttatcgcgattttcgggtgtcaagccattaattaggcttgaacctttcaatctttgataatctcta 4949022  T

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Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 5246969 - 5246902
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5246969 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5246902  T

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Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 5801337 - 5801404
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5801337 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5801404  T

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Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 10920829 - 10920896
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10920829 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10920896  T

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Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11428734 - 11428801
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11428734 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11428801  T

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Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 13735528 - 13735595
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13735528 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13735595  T

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Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16497982 - 16498049
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16497982 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16498049  T

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Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 18458977 - 18459044
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18458977 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18459044  T

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Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18627716 - 18627649
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18627716 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18627649  T

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Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20593437 - 20593370
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20593437 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20593370  T

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Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 35972697 - 35972630
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35972697 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35972630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 35994109 - 35994042
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35994109 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35994042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 39861587 - 39861654
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  39861587 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 39861654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 18623877 - 18623812
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctc 304  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||    
T  18623877 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctc 18623812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 2165955 - 2165887
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2165955 gtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2165887  T

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Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 11361983 - 11361915
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  11361983 gtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 11361915  T

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Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 14929264 - 14929332
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  14929264 gtgttatcgcgattttcgggtgtcaattcattaattaggcttgaacctttcaatctttgatattctcta 14929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15352730 - 15352798
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  15352730 gtgttatcgcgattttcgggtgtcaattcattaattaggcttgaacctttcaatctttgatattctcta 15352798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15918116 - 15918184
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  15918116 gtgttatcgcgattttcgggtgtcaaatcattaattaggcttgaacctttcaatctttgatattctcta 15918184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 18430686 - 18430618
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18430686 gtgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18430618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 36878512 - 36878580
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 305  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| |||||    
T  36878512 ggtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctct 36878580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 39635397 - 39635314
Alignment:
Q  111 caatcctactaaaattgaagtctatagagttatctcttttagcgtagtctcaacgttttcattgactaacttaggcatcaagtta 195  Q
    |||| ||||||||||  ||||||| ||| |||||||||| || ||||||| |||| ||||||| |||||||||||||||||||||    
T  39635397 caatgctactaaaatccaagtctacagatttatctcttt-agagtagtctaaacgctttcattaactaacttaggcatcaagtta 39635314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 2150743 - 2150676
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2150743 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2150676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 2969637 - 2969570
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2969637 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2969570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 2971209 - 2971142
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2971209 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 5169454 - 5169387
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5169454 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5169387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 14224918 - 14224985
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14224918 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14224985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16522393 - 16522460
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16522393 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16522460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 17079370 - 17079437
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  17079370 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 17079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18138481 - 18138414
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18138481 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18138414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 26749318 - 26749385
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  26749318 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 16507299 - 16507356
Alignment:
Q  249 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16507299 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16507356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 30309132 - 30309063
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| | ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  30309132 ggtgttattgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 30309063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 4779228 - 4779160
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||| ||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4779228 gtgttatcgcgatttttgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4779160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 23957114 - 23957166
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaat 291  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||    
T  23957114 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaat 23957166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 16453938 - 16453996
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  16453938 gattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 16453996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 7369966 - 7369899
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  7369966 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7369899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 10838754 - 10838821
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10838754 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10838821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 10852551 - 10852484
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10852551 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10852484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 13894656 - 13894723
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13894656 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13894723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15004101 - 15004168
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15004101 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16438991 - 16439058
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  |||| |||||||||||||||| |||||||||||||    
T  16438991 tgttatctcgattttggggtatcaagtcattaattagacttgaacctttcaatcattgataatctcta 16439058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 23231505 - 23231438
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  ||||||  ||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  23231505 tgttatcacgattttgaggtatcaagtcattaattaggcttgaacctttcaatctttgataatctcta 23231438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 23765842 - 23765775
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23765842 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23765775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 34195213 - 34195146
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34195213 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34195146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 34195495 - 34195562
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34195495 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 4056026 - 4055966
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  4056026 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 4055966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 13181721 - 13181789
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  13181721 gtgttatcacgattttggggtatcaagtcattaattaggtttgaacctttcaatctttgatattctcta 13181789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 30241068 - 30241136
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  30241068 gtgttatctcgattttggggtatcaaatcattaattaggcttgaacctttcaatctttgatattctcta 30241136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 150 - 78
Alignment:
Q  234 taaggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  150 taaggtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 78  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 25052898 - 25052965
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||    
T  25052898 tgttatcgcgattttcgggtgtcaagtcaataattaggcttgaacctttcaatctttgatattctcta 25052965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 18801816 - 18801748
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18801816 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18801748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 2126149 - 2126216
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  2126149 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 2126216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 2141306 - 2141373
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  2141306 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 2141373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16265127 - 16265060
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16265127 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16265060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16273708 - 16273641
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16273708 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16273641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19649813 - 19649880
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19649813 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19660858 - 19660925
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19660858 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19660925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 19665339 - 19665272
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19665339 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 556305 - 556237
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  556305 gtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 21376583 - 21376643
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| ||||||    
T  21376583 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgata 21376643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 22382222 - 22382282
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 298  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  22382222 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 22382282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 4819770 - 4819837
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4819770 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4819837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 5515800 - 5515867
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5515800 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5515867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 12479387 - 12479454
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  12479387 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 12479454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 14024612 - 14024679
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  14024612 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 14024679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 14358843 - 14358910
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  |||||||| |||||||||||| |||||| ||||||    
T  14358843 tgttatcgcgattttcgggtgtcaagtcattaattaggcttaaacctttcaatctttgatattctcta 14358910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 14553793 - 14553726
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  14553793 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 14553726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15211138 - 15211071
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  15211138 tgttatcgcgattttcgggtgtcaagtcataatttaggcttgaacctttcaatctttgatattctcta 15211071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16253721 - 16253788
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  16253721 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 16253788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 17903907 - 17903840
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  17903907 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 17903840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 18692740 - 18692807
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18692740 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 27597891 - 27597958
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  27597891 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 27597958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 27612943 - 27613010
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  27612943 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 27613010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 28263693 - 28263626
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  28263693 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 28263626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 29037595 - 29037528
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  | ||||||||||||||||||| |||||| ||||||    
T  29037595 tgttatcgcgattttcgggtgtcaagtcattaataaggcttgaacctttcaatctttgatattctcta 29037528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 30366573 - 30366640
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  |||| |||||||||||||||| |||||| ||||||    
T  30366573 tgttatcgcgattttcgggtgtcaagtcattaattagacttgaacctttcaatctttgatattctcta 30366640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 31338947 - 31339014
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  31338947 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 31339014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 33243015 - 33242948
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  33243015 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 33242948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 21336622 - 21336675
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 292  Q
    |||||||| |||||||||||||||||||| |  |||||||||||||||||||||    
T  21336622 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatc 21336675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 21966220 - 21966153
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21966220 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21966153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22070181 - 22070248
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22070181 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22070248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 22144136 - 22144069
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||| ||||||||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  22144136 tgttatcgcgatttttgggtgtcaagtcattaattaggtttgaacctttcaatctttgatattctcta 22144069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 1690458 - 1690388
Alignment:
Q  236 aggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1690458 aggtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1690388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 33272351 - 33272293
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  33272351 gattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 33272293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 24460719 - 24460779
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||  |||||||||||||||||| | |  ||||||||||||||||||||| ||||||    
T  24460719 tgttatcacgattttcgggtgtcaagttattaattaggcttgaacctttcaatctttgata 24460779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15018765 - 15018698
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15018765 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15018698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15325175 - 15325108
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||| ||||||||||| |    ||||||||||||||||||||| |||||| ||||||    
T  15325175 tgttatcgcgatttttgggtgtcaagttataaattaggcttgaacctttcaatctttgatattctcta 15325108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15505544 - 15505477
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||| ||||||||||| |    ||||||||||||||||||||| |||||| ||||||    
T  15505544 tgttatcgcgatttttgggtgtcaagttataaattaggcttgaacctttcaatctttgatattctcta 15505477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 19905898 - 19905968
Alignment:
Q  236 aggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||| ||||||||| ||||||||||    ||||| ||||| ||||||||| |||||| ||||||    
T  19905898 aggtgttatcgcgattttcggatgtcaagtcataaattaggattgaatctttcaatctttgatattctcta 19905968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 22087036 - 22087094
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| ||||||||||||| |  |||| |||||||||||||||| |||||| ||||||    
T  22087036 gattttggggtgtcaagtcattaattagacttgaacctttcaatctttgatattctcta 22087094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 29559285 - 29559343
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  29559285 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 29559343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 8882217 - 8882284
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8882217 tgttatcgtgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8882284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 26798805 - 26798735
Alignment:
Q  236 aggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26798805 aggtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26798735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 20361636 - 20361704
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20361636 gtgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 20361704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 20549274 - 20549206
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20549274 gtgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 20549206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 21886349 - 21886417
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21886349 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21886417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 46461123 - 46461055
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  46461123 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 46461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 48539996 - 48540064
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  48539996 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 48540064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 4146777 - 4146844
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4146777 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4146844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18598844 - 18598777
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18598844 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18598777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 20329183 - 20329250
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20329183 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 20329250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 20342727 - 20342794
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20342727 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 20342794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 21086865 - 21086798
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21086865 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21086798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22080241 - 22080308
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22080241 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22080308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 24655575 - 24655508
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24655575 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24655508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 34497318 - 34497251
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34497318 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34497251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 18294285 - 18294216
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18294285 ggtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18294216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 20320752 - 20320809
Alignment:
Q  249 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20320752 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 20320809  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 47662388 - 47662456
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  47662388 gtgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 47662456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 9178613 - 9178680
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  9178613 tgttatctcgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 9178680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 13105351 - 13105418
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13105351 tgttatcgcaattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13105418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 13575330 - 13575397
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  13575330 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 13575397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 17850737 - 17850670
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  17850737 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 17850670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 21482257 - 21482190
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  21482257 tgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 21482190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 21644707 - 21644774
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21644707 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21644774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16406412 - 16406345
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  16406412 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 16406345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 37884328 - 37884395
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||| | |  || |||||||||||||||||| |||||| ||||||    
T  37884328 tgttatcgcgattttcgggtgtcaagttattaatttggcttgaacctttcaatctttgatattctcta 37884395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 28161214 - 28161152
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||| | ||||||||    
T  28161214 ggtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgata 28161152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 31446982 - 31447051
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||| ||||||||||||||| |||||||||||||    
T  31446982 ggtgttatcacgattttggggtatcaagtcattatttaggtttgaacctttcaatctttgataatctcta 31447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 16231368 - 16231300
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16231368 gtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16231300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 28150738 - 28150678
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||| | ||||||||    
T  28150738 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgata 28150678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 5138458 - 5138391
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5138458 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5138391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 15434876 - 15434825
Alignment:
Q  255 gggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15434876 gggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15434825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16197044 - 16197111
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16197044 tgttatcccgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16197111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 16212053 - 16212120
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16212053 tgttatcccgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16212120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20457273 - 20457206
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20457273 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20457206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20490278 - 20490211
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20490278 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 21732196 - 21732129
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21732196 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21732129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 14956721 - 14956651
Alignment:
Q  236 aggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||| |||||||||||||||||||| |  ||| ||||||| ||||| ||  |||||| ||||||    
T  14956721 aggtgttatcgcgattttcgggtgtcaagtcattaattatgcttgaatctttctatttttgatattctcta 14956651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 13480373 - 13480441
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||| ||||||| |||||| ||||||    
T  13480373 gtgttatcacgattttggggtatcaagtcattaattaggcttgaaccattcaatctttgatattctcta 13480441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 4057 - 3988
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4057 ggtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 3988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 27688603 - 27688534
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27688603 ggtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27688534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 13065816 - 13065748
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13065816 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13065748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 17633244 - 17633176
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||||||    
T  17633244 gtgttatcgcgattttcgggtgtcaaatcattaattaggcttgaacctttcaatctttgataatctcta 17633176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 26619710 - 26619778
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26619710 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26619778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 4726816 - 4726883
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4726816 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4726883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 12666628 - 12666561
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12666628 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12666561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20832265 - 20832198
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20832265 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20832198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20834085 - 20834018
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20834085 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20834018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 37869696 - 37869763
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  37869696 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 37869763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 39758149 - 39758082
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  39758149 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 39758082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 40190755 - 40190822
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40190755 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40190822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 40193569 - 40193636
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40193569 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40193636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 12651705 - 12651639
Alignment:
Q  240 gttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12651705 gttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12651639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 8692052 - 8692120
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  8692052 gtgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 8692120  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 27423470 - 27423538
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  27423470 gtgttatcgcgattttcgggtgtcaagtcattaattgggcttgaacctttcaatctttgatattctcta 27423538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 32236016 - 32236084
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||| ||||||||||||| |||||| ||||||    
T  32236016 gtgttatcgcgattttcgggtgtcaagtcattaattaggctcgaacctttcaatctttgatattctcta 32236084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 5391382 - 5391449
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  5391382 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 5391449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22601408 - 22601475
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  22601408 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 22601475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 23122182 - 23122115
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  23122182 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 23122115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 23502464 - 23502531
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  23502464 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 23502531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 26265052 - 26265119
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||| ||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26265052 tgttgtcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26265119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 28268820 - 28268887
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  28268820 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 28268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 28276221 - 28276154
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  28276221 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 28276154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 30204794 - 30204861
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||| ||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30204794 tgttatcgcgattttcgggtgccaagtcattaattaggcttgaacctttcaatctttgatattctcta 30204861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 34305718 - 34305785
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  34305718 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 34305785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 40795687 - 40795620
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40795687 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40795620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 26064600 - 26064658
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26064600 gattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 18086438 - 18086370
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  18086438 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgataatctcta 18086370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 27389171 - 27389104
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27389171 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27389104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 27438517 - 27438584
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||| ||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  27438517 tgttatcgcgatttttgggtgtcaagtcattaattgggcttgaacctttcaatctttgatattctcta 27438584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 28878367 - 28878312
Alignment:
Q  251 tttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28878367 tttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28878312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 28893579 - 28893524
Alignment:
Q  251 tttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28893579 tttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28893524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 34262919 - 34262986
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||| ||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  34262919 tgttatcgcgattttcggatgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 34262986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 19555935 - 19555993
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19555935 gattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19555993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 15713037 - 15713092
Alignment:
Q  251 tttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  15713037 tttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 15713092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18140651 - 18140584
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18140651 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18140584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 29438669 - 29438736
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| || ||||||||||    
T  29438669 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatcatttataatctcta 29438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 30461843 - 30461776
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30461843 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30461776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 10114920 - 10114989
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| | |||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10114920 ggtgttatcacgattttggggtattaagtcattaattaggcttgaacctttcaatctttgatattctcta 10114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 19445671 - 19445739
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  ||||||  ||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19445671 gtgttatcacgattttgaggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19445739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 27400216 - 27400172
Alignment:
Q  255 gggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    ||||||||||||| |  ||||||||||||||||||||| ||||||    
T  27400216 gggtgtcaagtcattaattaggcttgaacctttcaatctttgata 27400172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1933 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1933
Description:

Target: scaffold1933; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 1040 - 1108
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1040 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 12801 - 12869
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12801 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 17024148 - 17024080
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17024148 gtgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17024080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 5199309 - 5199376
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5199309 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5199376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 9247149 - 9247216
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  9247149 tgttatcgagattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 9247216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 14658111 - 14658178
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14658111 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14658178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 14676259 - 14676192
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14676259 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14676192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 17010182 - 17010115
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17010182 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17010115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18044683 - 18044616
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18044683 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18044616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19638933 - 19639000
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19638933 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19639000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 20309597 - 20309526
Alignment:
Q  235 aaggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  20309597 aaggtgttatcgcgattttcgggtgtcaagtcatatattaggcttgaacctttcaatctttgatattctcta 20309526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22110928 - 22110995
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22110928 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22110995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 34272542 - 34272475
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34272542 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34272475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 39128568 - 39128501
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||    
T  39128568 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgaaaatctcta 39128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 40463476 - 40463543
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40463476 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40463543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 40563740 - 40563673
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40563740 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40563673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4866308 - 4866241
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  4866308 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 4866241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 5317790 - 5317723
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5317790 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5317723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 6556685 - 6556744
Alignment:
Q  247 tgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  6556685 tgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 6556744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 11772582 - 11772515
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  11772582 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 11772515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 13441809 - 13441742
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  13441809 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 13441742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 14239390 - 14239457
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||| ||| |||||||||||||    
T  14239390 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcgatcattgataatctcta 14239457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 14657825 - 14657758
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  14657825 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 14657758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15195569 - 15195636
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15195569 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15195636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 30279027 - 30278960
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  30279027 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 30278960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 34849216 - 34849149
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  34849216 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 34849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 15069294 - 15069228
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 305  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| |||||    
T  15069294 tgttatcgcgattttcgggtgtcaagtcattaattcggcttgaacctttcaatctttgatattctct 15069228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 16815680 - 16815614
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 305  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| |||||    
T  16815680 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctct 16815614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 8542297 - 8542360
Alignment:
Q  243 atcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||||||| ||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  8542297 atcgtgattttcgagtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 8542360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15375581 - 15375648
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15375581 tgttatctggattttggggtgtcaagtcattcattaggcttgaacctttcaatctttgatattctcta 15375648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15395405 - 15395472
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15395405 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15395472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 16472509 - 16472560
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaa 290  Q
    |||||||| |||||||||||||||||||| |  |||||||||||||||||||    
T  16472509 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaa 16472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 26460763 - 26460830
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| | |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26460763 tgttattgcgatttttgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26460830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 15238973 - 15238905
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15238973 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15238905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 17087735 - 17087667
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17087735 gtgttatcacgattttagggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 17095710 - 17095642
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17095710 gtgttatcacgattttagggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 26138149 - 26138217
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26138149 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26138217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 1896458 - 1896391
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1896458 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1896391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 1910668 - 1910601
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1910668 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1910601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15085518 - 15085585
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15085518 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15085585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15220217 - 15220150
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15220217 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15220150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 17242382 - 17242315
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17242382 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17242315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22726894 - 22726961
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22726894 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22726961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 26406303 - 26406370
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26406303 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26406370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 12786276 - 12786218
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12786276 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12786218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 15298844 - 15298902
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15298844 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15298902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 16244386 - 16244443
Alignment:
Q  249 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16244386 attttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16244443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 46660891 - 46660838
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 292  Q
    |||||||  |||||| ||||||||||||| |  |||||||||||||||||||||    
T  46660891 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatc 46660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 1677852 - 1677784
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||  |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1677852 gtgttatcacgatttcggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1677784  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 15642549 - 15642617
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||  |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15642549 gtgttatcacgatttcggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15642617  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 39166335 - 39166395
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||| |||||||||||||||| |||    ||||||||||||||||| | ||||||||    
T  39166335 tgttatcgcgattttcgggtgtcaaatcataaattaggcttgaacctttcgaccgttgata 39166395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 150 - 83
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  150 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 1470 - 1537
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1470 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1537  T

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Target: scaffold0604 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 9756 - 9823
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  9756 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 9823  T

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Target: scaffold0322 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 18206 - 18135
Alignment:
Q  235 aaggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||| ||||||||||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18206 aaggtgttatcgcgattttcgggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18135  T

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Target: scaffold0260 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 5050 - 5117
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  5050 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 5117  T

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Target: scaffold0214 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16166 - 16099
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16166 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16099  T

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Target: scaffold0143 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 23459 - 23392
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23459 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23392  T

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Target: scaffold0089 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 10859 - 10926
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10859 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 25968 - 25901
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25968 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 51074 - 51141
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  51074 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 51141  T

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Target: scaffold0060 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24129 - 24196
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24129 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24196  T

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Target: scaffold0029 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 4236 - 4303
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4236 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4303  T

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Target: scaffold0016 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 208561 - 208628
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  208561 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 208628  T

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Target: scaffold0001 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 72177 - 72244
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  72177 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 72244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 443445 - 443512
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  443445 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 443512  T

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Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 31340 - 31406
Alignment:
Q  240 gttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  31340 gttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 31406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 167452 - 167386
Alignment:
Q  240 gttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  167452 gttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 167386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 25738 - 25807
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| |||||||||| ||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25738 ggtgttatcgcgattttcgggcgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25807  T

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Target: scaffold0145 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 34767 - 34698
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  34767 ggtgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 34698  T

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Target: scaffold0597 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 8850 - 8782
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  8850 gtgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 8782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 60 - 1
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 298  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  60 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 92 - 24
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| |||| ||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  92 gtgttatcgcgattctcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 16641 - 16709
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16641 gtgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16709  T

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Target: scaffold0240 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 19900 - 19968
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19900 gtgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 19968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2097 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2097
Description:

Target: scaffold2097; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 592 - 525
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  592 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1618 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1618
Description:

Target: scaffold1618; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 1112 - 1179
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  1112 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1120 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 1428 - 1487
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 298  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  1428 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 1487  T

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Target: scaffold0601 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 6519 - 6586
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||| |||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  6519 tgttatcgcgattttccggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 6586  T

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Target: scaffold0338 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11906 - 11973
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  |||||||||||||||||||||  ||||| ||||||    
T  11906 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctctgatattctcta 11973  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19957 - 20024
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19957 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 20024  T

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Target: scaffold0280 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 22829 - 22762
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  22829 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 22762  T

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Target: scaffold0178 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 26884 - 26951
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  26884 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26951  T

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Target: scaffold0161 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 14727 - 14794
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  14727 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 14794  T

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Target: scaffold0161; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19400 - 19467
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19400 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 19467  T

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Target: scaffold0125 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 216 - 149
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  216 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 149  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16582 - 16515
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  16582 tgttatcgcgattttcgggtgtcaagtcataatttaggcttgaacctttcaatctttgatattctcta 16515  T

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Target: scaffold0112 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 42367 - 42434
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  | ||||||||||||||||||| |||||| ||||||    
T  42367 tgttatcgcgattttcgggtgtcaagtcattaatcaggcttgaacctttcaatctttgatattctcta 42434  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 12000 - 12067
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  12000 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 12067  T

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Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 172 - 105
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||| | |  ||||||||||||||||||||| |||||| ||||||    
T  172 tgttatcgcgattttcgggtgtcaagttattaattaggcttgaacctttcaatctttgatattctcta 105  T

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Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 145449 - 145516
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  145449 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 145516  T

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Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 220807 - 220874
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  220807 tgttatcgcgattttcgggtgtcaagtcattaattagggttgaacctttcaatctttgatattctcta 220874  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 191040 - 190973
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| |||||||||||||||||||| |  ||||||| ||||||||||||| |||||| ||||||    
T  191040 tgttatcgcgattttcgggtgtcaagtcattaattaggctggaacctttcaatctttgatattctcta 190973  T

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Target: scaffold0547 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 4580 - 4646
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 305  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| |||||    
T  4580 tgttatcgcgattttcgggtgtcaagtcatgaattaggcttgaacctttcaatctttgatattctct 4646  T

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Target: scaffold0535 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 6666 - 6732
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 305  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| |||||    
T  6666 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctct 6732  T

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Target: scaffold1953 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1953
Description:

Target: scaffold1953; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 62 - 1
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||| |||||||| |||||||||||| |  ||||||||||||||||||||| ||||||    
T  62 gtgttatcatgattttcaggtgtcaagtcattaattaggcttgaacctttcaatctttgata 1  T

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Target: scaffold0206 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 13252 - 13184
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13252 gtgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13184  T

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Target: scaffold0109 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 31996 - 31928
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  31996 gtgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 31928  T

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Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 17752 - 17699
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 292  Q
    |||||||  |||||| ||||||||||||| |  |||||||||||||||||||||    
T  17752 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatc 17699  T

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Target: scaffold1957 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 93 - 26
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| || |||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  93 tgttatcgcgactttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26  T

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Target: scaffold1121 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1121
Description:

Target: scaffold1121; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 74 - 7
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||| ||||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  74 tgttatcatgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7  T

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Target: scaffold0530 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11398 - 11465
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11398 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11465  T

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Target: scaffold0174 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 2950 - 2883
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  2950 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 2883  T

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Target: scaffold0174; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 9072 - 9005
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  9072 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 9005  T

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Target: scaffold0074 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11564 - 11631
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11564 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11631  T

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Target: scaffold0055 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 6804 - 6875
Alignment:
Q  235 aaggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  6804 aaggtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 6875  T

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Target: scaffold0052 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 77731 - 77660
Alignment:
Q  235 aaggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  77731 aaggtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 77660  T

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Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 10437 - 10506
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10437 ggtgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10506  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 120421 - 120352
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  120421 ggtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 120352  T

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Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 131298 - 131229
Alignment:
Q  237 ggtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  131298 ggtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 131229  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 26954 - 26886
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26954 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26886  T

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Target: scaffold0134 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 28190 - 28122
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28190 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28122  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 45890 - 45958
Alignment:
Q  238 gtgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  45890 gtgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 45958  T

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Target: scaffold0521 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11870 - 11937
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11870 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11937  T

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Target: scaffold0413 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 7658 - 7591
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| || ||| ||||||    
T  7658 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatcttttatattctcta 7591  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 18201 - 18268
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18201 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18268  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 24307 - 24240
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24307 tgttatcccgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24240  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 28340 - 28273
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28340 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28273  T

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Target: scaffold0068 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 52758 - 52825
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    |||||| ||||| |||||||| |||||| ||||||    
T  52758 tgttatcgcgattttcgggtgtcaagtcataaattaggcatgaacatttcaatctttgatattctcta 52825  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 35512 - 35579
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||| ||||||||||||||||||||    |||||| ||||| |||||||| |||||| ||||||    
T  35512 tgttatcgcgattttcgggtgtcaagtcataaattaggcatgaacatttcaatctttgatattctcta 35579  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 45080 - 45013
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  45080 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 45013  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 96054 - 96121
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  96054 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 96121  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 180822 - 180755
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  180822 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 180755  T

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Target: scaffold0393 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 7794 - 7728
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 305  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| |||||    
T  7794 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctct 7728  T

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Target: scaffold0196 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 210 - 152
Alignment:
Q  248 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 306  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  210 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 152  T

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Target: scaffold0476 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 65 - 5
Alignment:
Q  239 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 299  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  65 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 5  T

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