View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16910_low_1 (Length: 518)

Name: NF16910_low_1
Description: NF16910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16910_low_1
NF16910_low_1
[»] chr3 (68 HSPs)
chr3 (125-515)||(16743991-16744382)
chr3 (141-465)||(13838905-13839232)
chr3 (129-391)||(17912483-17912745)
chr3 (129-465)||(14842487-14842825)
chr3 (129-465)||(2049809-2050147)
chr3 (125-465)||(12030073-12030415)
chr3 (125-428)||(15858986-15859292)
chr3 (329-513)||(19231982-19232169)
chr3 (226-391)||(2449238-2449404)
chr3 (130-401)||(51158008-51158281)
chr3 (125-384)||(15936634-15936895)
chr3 (345-465)||(19260749-19260869)
chr3 (133-384)||(15938476-15938729)
chr3 (259-391)||(13975722-13975853)
chr3 (259-391)||(45860937-45861068)
chr3 (259-391)||(13954890-13955021)
chr3 (430-508)||(15857120-15857198)
chr3 (125-466)||(15614829-15615170)
chr3 (433-513)||(3992873-3992953)
chr3 (433-513)||(55513193-55513273)
chr3 (433-513)||(2844514-2844594)
chr3 (433-513)||(54037976-54038056)
chr3 (433-513)||(17955832-17955916)
chr3 (433-513)||(7854305-7854385)
chr3 (129-357)||(16821138-16821369)
chr3 (259-379)||(55316351-55316471)
chr3 (433-494)||(45581954-45582016)
chr3 (125-239)||(47984645-47984759)
chr3 (125-239)||(48003219-48003333)
chr3 (259-379)||(41270207-41270327)
chr3 (9-60)||(2449402-2449453)
chr3 (9-60)||(16744447-16744498)
chr3 (125-239)||(47993932-47994046)
chr3 (125-239)||(48012505-48012619)
chr3 (334-375)||(14080715-14080756)
chr3 (449-506)||(17205019-17205076)
chr3 (433-506)||(38810868-38810941)
chr3 (451-506)||(12031849-12031904)
chr3 (125-171)||(15468555-15468601)
chr3 (312-465)||(54651642-54651796)
chr3 (433-506)||(13301323-13301396)
chr3 (433-506)||(13311979-13312052)
chr3 (449-506)||(17191879-17191936)
chr3 (433-465)||(2449152-2449184)
chr3 (126-241)||(11329098-11329214)
chr3 (433-465)||(16261777-16261809)
chr3 (433-465)||(16933869-16933901)
chr3 (433-465)||(17912398-17912430)
chr3 (433-465)||(23492696-23492728)
chr3 (433-465)||(38168237-38168269)
chr3 (433-465)||(53771365-53771397)
chr3 (147-241)||(17139524-17139618)
chr3 (125-171)||(22275204-22275250)
chr3 (125-171)||(41270070-41270116)
chr3 (125-171)||(55316214-55316260)
chr3 (449-506)||(3576290-3576347)
chr3 (126-247)||(12264932-12265053)
chr3 (434-499)||(15550922-15550987)
chr3 (433-465)||(11986080-11986112)
chr3 (312-384)||(11986173-11986245)
chr3 (433-465)||(13954804-13954836)
chr3 (433-465)||(14285289-14285321)
chr3 (433-465)||(19947026-19947058)
chr3 (433-465)||(30153265-30153297)
chr3 (433-465)||(33342204-33342236)
chr3 (154-218)||(38811168-38811232)
chr3 (433-465)||(45861122-45861154)
chr3 (433-465)||(51961031-51961063)
[»] chr8 (41 HSPs)
chr8 (125-391)||(22907214-22907481)
chr8 (129-513)||(16404852-16405236)
chr8 (130-465)||(16193643-16193979)
chr8 (141-465)||(24928716-24929043)
chr8 (125-465)||(43373392-43373736)
chr8 (226-391)||(5238184-5238350)
chr8 (226-391)||(24661248-24661414)
chr8 (226-391)||(43685643-43685809)
chr8 (125-379)||(6774258-6774514)
chr8 (141-391)||(17345581-17345832)
chr8 (125-379)||(24548977-24549233)
chr8 (433-513)||(274766-274846)
chr8 (433-513)||(641003-641083)
chr8 (433-513)||(826809-826889)
chr8 (433-513)||(24716714-24716794)
chr8 (259-375)||(21844576-21844692)
chr8 (259-375)||(21851969-21852085)
chr8 (9-60)||(5238135-5238186)
chr8 (9-60)||(24661412-24661463)
chr8 (9-60)||(22907546-22907597)
chr8 (9-60)||(43685594-43685645)
chr8 (259-379)||(30120854-30120974)
chr8 (433-513)||(39115598-39115678)
chr8 (259-379)||(16674392-16674512)
chr8 (125-173)||(222900-222948)
chr8 (125-173)||(736523-736571)
chr8 (125-173)||(860418-860466)
chr8 (449-506)||(17285543-17285600)
chr8 (449-506)||(21198005-21198062)
chr8 (152-241)||(23837219-23837308)
chr8 (433-465)||(5238404-5238436)
chr8 (433-465)||(22907128-22907160)
chr8 (433-465)||(24385652-24385684)
chr8 (433-465)||(24661162-24661194)
chr8 (433-465)||(43685863-43685895)
chr8 (10-56)||(22321608-22321654)
chr8 (334-375)||(23149985-23150026)
chr8 (334-375)||(23226076-23226117)
chr8 (433-465)||(2545265-2545297)
chr8 (433-465)||(3431176-3431208)
chr8 (433-465)||(22886654-22886686)
[»] chr4 (37 HSPs)
chr4 (125-391)||(26680196-26680463)
chr4 (125-513)||(54118120-54118512)
chr4 (125-465)||(13246425-13246769)
chr4 (129-465)||(15675009-15675353)
chr4 (259-465)||(122020-122226)
chr4 (226-391)||(10488659-10488825)
chr4 (226-391)||(16327926-16328092)
chr4 (194-465)||(10104170-10104449)
chr4 (129-364)||(31115628-31115865)
chr4 (329-465)||(33240901-33241043)
chr4 (259-391)||(13048221-13048353)
chr4 (125-375)||(10644214-10644467)
chr4 (433-513)||(25119059-25119139)
chr4 (433-513)||(5682380-5682460)
chr4 (359-465)||(31132545-31132657)
chr4 (129-228)||(111394-111493)
chr4 (9-60)||(26680080-26680131)
chr4 (125-379)||(47357649-47357906)
chr4 (9-60)||(10488610-10488661)
chr4 (194-375)||(40885570-40885753)
chr4 (15-60)||(16328090-16328135)
chr4 (433-506)||(41165808-41165881)
chr4 (129-173)||(10104451-10104495)
chr4 (154-241)||(15044851-15044938)
chr4 (152-241)||(41166083-41166172)
chr4 (449-506)||(47534933-47534990)
chr4 (433-465)||(14952085-14952117)
chr4 (433-465)||(15135907-15135939)
chr4 (433-465)||(15272211-15272243)
chr4 (433-465)||(16327840-16327872)
chr4 (433-465)||(16609013-16609045)
chr4 (433-465)||(26680517-26680549)
chr4 (154-241)||(15109486-15109573)
chr4 (147-241)||(13809647-13809741)
chr4 (433-465)||(8045272-8045304)
chr4 (334-374)||(13809511-13809551)
chr4 (433-465)||(16523146-16523178)
[»] scaffold0078 (4 HSPs)
scaffold0078 (125-391)||(37066-37333)
scaffold0078 (433-513)||(41632-41712)
scaffold0078 (16-60)||(37398-37442)
scaffold0078 (433-465)||(36980-37012)
[»] chr7 (52 HSPs)
chr7 (125-391)||(7293012-7293279)
chr7 (129-506)||(3059965-3060344)
chr7 (125-465)||(16211761-16212103)
chr7 (125-465)||(13036938-13037282)
chr7 (125-465)||(11580661-11581007)
chr7 (125-465)||(36052662-36053003)
chr7 (226-391)||(11516324-11516490)
chr7 (226-391)||(15441564-15441730)
chr7 (226-391)||(30262129-30262295)
chr7 (129-391)||(47481031-47481295)
chr7 (125-384)||(18253842-18254103)
chr7 (125-390)||(13321009-13321278)
chr7 (129-373)||(16478968-16479214)
chr7 (259-391)||(25292338-25292470)
chr7 (433-513)||(32493898-32493978)
chr7 (433-513)||(126738-126818)
chr7 (259-375)||(13572808-13572924)
chr7 (433-513)||(1936869-1936949)
chr7 (9-60)||(15441728-15441779)
chr7 (9-60)||(30262293-30262344)
chr7 (263-463)||(295893-296094)
chr7 (433-513)||(111121-111201)
chr7 (259-379)||(10989541-10989661)
chr7 (125-379)||(13911024-13911282)
chr7 (260-380)||(2437590-2437710)
chr7 (399-506)||(13377819-13377924)
chr7 (434-513)||(7283908-7283987)
chr7 (9-60)||(7292896-7292947)
chr7 (9-60)||(11516275-11516326)
chr7 (349-391)||(14113989-14114031)
chr7 (349-391)||(14423639-14423681)
chr7 (449-506)||(13389693-13389750)
chr7 (359-465)||(36024372-36024485)
chr7 (147-241)||(49047811-49047905)
chr7 (433-465)||(2029244-2029276)
chr7 (433-465)||(7293333-7293365)
chr7 (125-173)||(10989405-10989453)
chr7 (433-465)||(11516544-11516576)
chr7 (433-465)||(14113903-14113935)
chr7 (433-465)||(15441478-15441510)
chr7 (396-465)||(15709428-15709501)
chr7 (450-506)||(16919870-16919926)
chr7 (433-465)||(30262043-30262075)
chr7 (433-465)||(42056188-42056220)
chr7 (154-241)||(13377552-13377639)
chr7 (147-241)||(13274803-13274897)
chr7 (433-465)||(371417-371449)
chr7 (433-465)||(3049905-3049937)
chr7 (433-465)||(13321334-13321366)
chr7 (433-461)||(15516765-15516793)
chr7 (433-465)||(25124450-25124482)
chr7 (433-465)||(47480944-47480976)
[»] chr1 (27 HSPs)
chr1 (129-515)||(41394221-41394609)
chr1 (125-465)||(20931340-20931682)
chr1 (125-465)||(20445674-20446019)
chr1 (125-465)||(20913032-20913367)
chr1 (125-465)||(37844374-37844719)
chr1 (125-465)||(20531439-20531783)
chr1 (125-465)||(20893551-20893894)
chr1 (226-391)||(51452589-51452755)
chr1 (125-379)||(2116249-2116506)
chr1 (129-464)||(22227808-22228146)
chr1 (129-464)||(22232505-22232843)
chr1 (433-513)||(21860334-21860414)
chr1 (433-507)||(44034829-44034903)
chr1 (259-466)||(45051554-45051759)
chr1 (399-506)||(27675086-27675191)
chr1 (433-513)||(41218728-41218808)
chr1 (9-60)||(51452540-51452591)
chr1 (259-379)||(5072388-5072508)
chr1 (259-379)||(18601118-18601238)
chr1 (449-506)||(13376711-13376768)
chr1 (449-506)||(20177513-20177570)
chr1 (433-464)||(15861327-15861358)
chr1 (125-171)||(5072599-5072645)
chr1 (125-171)||(18601329-18601375)
chr1 (334-375)||(22143361-22143402)
chr1 (125-173)||(45051437-45051485)
chr1 (433-465)||(51452809-51452841)
[»] chr2 (38 HSPs)
chr2 (125-513)||(19794581-19794972)
chr2 (129-513)||(43642833-43643221)
chr2 (129-513)||(20627190-20627577)
chr2 (125-465)||(36982364-36982709)
chr2 (125-465)||(462733-463075)
chr2 (125-465)||(8891237-8891581)
chr2 (129-465)||(24341309-24341653)
chr2 (226-391)||(19689401-19689567)
chr2 (226-391)||(23820168-23820334)
chr2 (226-391)||(14906440-14906606)
chr2 (226-391)||(20015108-20015274)
chr2 (125-391)||(25265390-25265658)
chr2 (259-391)||(17396653-17396784)
chr2 (369-465)||(22863169-22863267)
chr2 (129-341)||(7507894-7508108)
chr2 (433-513)||(22275045-22275125)
chr2 (433-513)||(22284278-22284358)
chr2 (434-513)||(15633538-15633617)
chr2 (125-379)||(19886661-19886918)
chr2 (9-60)||(14906604-14906655)
chr2 (9-60)||(20015059-20015110)
chr2 (9-60)||(23820119-23820170)
chr2 (449-506)||(43646232-43646289)
chr2 (25-60)||(19689565-19689600)
chr2 (433-466)||(19689314-19689347)
chr2 (433-465)||(9652796-9652828)
chr2 (433-465)||(14906354-14906386)
chr2 (454-506)||(19660221-19660273)
chr2 (433-465)||(23820388-23820420)
chr2 (433-464)||(25213372-25213403)
chr2 (433-506)||(19666848-19666921)
chr2 (449-506)||(25305769-25305826)
chr2 (399-506)||(31146032-31146138)
chr2 (433-465)||(7507757-7507789)
chr2 (433-465)||(17396567-17396599)
chr2 (433-465)||(20015328-20015360)
chr2 (433-465)||(28031134-28031166)
chr2 (433-465)||(33128372-33128404)
[»] scaffold0023 (3 HSPs)
scaffold0023 (125-465)||(48593-48935)
scaffold0023 (125-357)||(36088-36323)
scaffold0023 (433-465)||(61122-61154)
[»] scaffold0266 (2 HSPs)
scaffold0266 (125-465)||(1119-1462)
scaffold0266 (127-465)||(3508-3848)
[»] scaffold0195 (2 HSPs)
scaffold0195 (125-462)||(19201-19543)
scaffold0195 (125-391)||(21285-21553)
[»] scaffold0077 (2 HSPs)
scaffold0077 (125-466)||(36836-37181)
scaffold0077 (434-513)||(15319-15398)
[»] scaffold0001 (2 HSPs)
scaffold0001 (141-465)||(171916-172242)
scaffold0001 (141-465)||(177619-177945)
[»] chr5 (45 HSPs)
chr5 (125-465)||(23506960-23507302)
chr5 (125-465)||(27182471-27182815)
chr5 (129-465)||(18530988-18531331)
chr5 (129-465)||(22053753-22054097)
chr5 (226-391)||(20623066-20623232)
chr5 (226-391)||(21233528-21233694)
chr5 (229-391)||(37052844-37053007)
chr5 (226-391)||(16536294-16536460)
chr5 (226-389)||(25900408-25900571)
chr5 (141-391)||(34939289-34939540)
chr5 (259-379)||(29188284-29188404)
chr5 (125-379)||(4199985-4200242)
chr5 (125-379)||(22366481-22366738)
chr5 (125-379)||(25426623-25426880)
chr5 (261-375)||(27009975-27010089)
chr5 (125-376)||(18777995-18778249)
chr5 (9-60)||(20623017-20623068)
chr5 (9-60)||(21233692-21233743)
chr5 (125-379)||(12369-12626)
chr5 (125-379)||(19499894-19500151)
chr5 (125-379)||(21073595-21073852)
chr5 (9-59)||(37052792-37052842)
chr5 (259-376)||(43443398-43443515)
chr5 (9-60)||(25900569-25900620)
chr5 (434-508)||(11584374-11584448)
chr5 (9-60)||(16536245-16536296)
chr5 (126-241)||(23493913-23494029)
chr5 (433-506)||(5450695-5450768)
chr5 (449-506)||(21222462-21222519)
chr5 (433-465)||(16105967-16105999)
chr5 (433-465)||(20623286-20623318)
chr5 (433-465)||(21233442-21233474)
chr5 (433-465)||(25900320-25900352)
chr5 (125-173)||(29190483-29190531)
chr5 (433-465)||(37053061-37053093)
chr5 (125-171)||(17471803-17471849)
chr5 (334-375)||(21310709-21310750)
chr5 (334-375)||(23981516-23981557)
chr5 (126-247)||(35791238-35791359)
chr5 (128-173)||(43443604-43443649)
chr5 (433-465)||(108728-108760)
chr5 (177-241)||(7728466-7728530)
chr5 (433-465)||(9730278-9730310)
chr5 (433-465)||(16536514-16536546)
chr5 (312-384)||(32950879-32950951)
[»] scaffold0106 (1 HSPs)
scaffold0106 (125-465)||(41724-42066)
[»] chr6 (37 HSPs)
chr6 (125-465)||(23153442-23153786)
chr6 (125-464)||(14626045-14626386)
chr6 (125-391)||(35009439-35009707)
chr6 (141-391)||(1657748-1657999)
chr6 (141-391)||(15862484-15862734)
chr6 (125-466)||(1650020-1650361)
chr6 (396-465)||(23148266-23148335)
chr6 (433-513)||(19983144-19983224)
chr6 (433-513)||(35015009-35015089)
chr6 (125-379)||(25175558-25175815)
chr6 (433-513)||(18583640-18583720)
chr6 (125-379)||(27653983-27654240)
chr6 (308-391)||(27751605-27751688)
chr6 (449-506)||(21623506-21623563)
chr6 (259-379)||(16825752-16825874)
chr6 (194-391)||(29665937-29666137)
chr6 (449-506)||(22361619-22361676)
chr6 (434-506)||(14152632-14152704)
chr6 (433-465)||(18002395-18002427)
chr6 (152-240)||(18381821-18381909)
chr6 (433-465)||(23995247-23995279)
chr6 (433-465)||(26090059-26090091)
chr6 (129-233)||(27740837-27740941)
chr6 (433-464)||(4991396-4991427)
chr6 (435-465)||(15742120-15742150)
chr6 (334-375)||(16887792-16887833)
chr6 (125-217)||(22361926-22362019)
chr6 (334-375)||(33324898-33324939)
chr6 (334-375)||(35136013-35136054)
chr6 (433-465)||(1657661-1657693)
chr6 (433-465)||(15862789-15862821)
chr6 (125-173)||(16825963-16826011)
chr6 (433-465)||(18823283-18823315)
chr6 (433-465)||(18839138-18839170)
chr6 (177-241)||(25367374-25367438)
chr6 (433-465)||(27751742-27751774)
chr6 (433-465)||(32276659-32276691)
[»] scaffold0175 (1 HSPs)
scaffold0175 (129-465)||(882-1219)
[»] scaffold0012 (2 HSPs)
scaffold0012 (125-465)||(247366-247710)
scaffold0012 (433-465)||(34075-34107)
[»] scaffold0302 (1 HSPs)
scaffold0302 (125-465)||(12110-12450)
[»] scaffold0162 (3 HSPs)
scaffold0162 (125-465)||(26340-26683)
scaffold0162 (125-391)||(8180-8445)
scaffold0162 (449-506)||(6877-6934)
[»] scaffold0009 (1 HSPs)
scaffold0009 (136-465)||(272031-272362)
[»] scaffold0008 (2 HSPs)
scaffold0008 (125-465)||(128095-128436)
scaffold0008 (125-357)||(31697-31933)
[»] scaffold0413 (1 HSPs)
scaffold0413 (129-465)||(5990-6327)
[»] scaffold0498 (1 HSPs)
scaffold0498 (125-465)||(8873-9215)
[»] scaffold0218 (1 HSPs)
scaffold0218 (125-455)||(4996-5329)
[»] scaffold0018 (1 HSPs)
scaffold0018 (259-463)||(51110-51314)
[»] scaffold0011 (1 HSPs)
scaffold0011 (125-465)||(123087-123432)
[»] scaffold0025 (3 HSPs)
scaffold0025 (129-465)||(8848-9192)
scaffold0025 (125-417)||(148716-149012)
scaffold0025 (365-465)||(146838-146938)
[»] scaffold0141 (6 HSPs)
scaffold0141 (226-391)||(26892-27058)
scaffold0141 (226-384)||(22637-22796)
scaffold0141 (9-60)||(22588-22639)
scaffold0141 (9-60)||(26843-26894)
scaffold0141 (433-465)||(22857-22889)
scaffold0141 (433-465)||(27112-27144)
[»] scaffold0124 (3 HSPs)
scaffold0124 (226-391)||(1582-1748)
scaffold0124 (9-60)||(1746-1797)
scaffold0124 (433-465)||(1496-1528)
[»] scaffold0028 (4 HSPs)
scaffold0028 (259-465)||(89378-89586)
scaffold0028 (340-465)||(107708-107835)
scaffold0028 (433-464)||(130880-130911)
scaffold0028 (334-375)||(79745-79786)
[»] scaffold0049 (2 HSPs)
scaffold0049 (125-384)||(48182-48443)
scaffold0049 (434-513)||(20493-20572)
[»] scaffold0132 (3 HSPs)
scaffold0132 (125-391)||(13501-13769)
scaffold0132 (433-513)||(42677-42754)
scaffold0132 (433-465)||(13824-13856)
[»] scaffold0125 (2 HSPs)
scaffold0125 (125-391)||(41643-41911)
scaffold0125 (425-465)||(41957-41997)
[»] scaffold0026 (3 HSPs)
scaffold0026 (129-384)||(107746-108003)
scaffold0026 (259-375)||(64527-64648)
scaffold0026 (334-376)||(89863-89905)
[»] scaffold1542 (1 HSPs)
scaffold1542 (125-391)||(534-802)
[»] scaffold0772 (2 HSPs)
scaffold0772 (259-384)||(5660-5785)
scaffold0772 (433-465)||(5846-5878)
[»] scaffold0075 (1 HSPs)
scaffold0075 (129-391)||(34460-34725)
[»] scaffold0529 (1 HSPs)
scaffold0529 (125-380)||(2957-3215)
[»] scaffold0215 (2 HSPs)
scaffold0215 (125-357)||(9371-9605)
scaffold0215 (125-357)||(16269-16503)
[»] scaffold0034 (1 HSPs)
scaffold0034 (433-513)||(80187-80267)
[»] scaffold0016 (3 HSPs)
scaffold0016 (432-513)||(166116-166197)
scaffold0016 (432-507)||(162036-162111)
scaffold0016 (433-506)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (433-513)||(31132-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (433-507)||(5735-5809)
scaffold0686 (433-507)||(5941-6015)
[»] scaffold0420 (1 HSPs)
scaffold0420 (259-379)||(13325-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (259-375)||(167-283)
scaffold0116 (433-513)||(30417-30497)
[»] scaffold0022 (2 HSPs)
scaffold0022 (129-341)||(5254-5467)
scaffold0022 (334-374)||(102923-102963)
[»] scaffold0622 (1 HSPs)
scaffold0622 (125-228)||(9377-9480)
[»] scaffold0076 (1 HSPs)
scaffold0076 (125-356)||(42992-43226)
[»] scaffold0342 (1 HSPs)
scaffold0342 (432-513)||(304-385)
[»] scaffold0369 (1 HSPs)
scaffold0369 (129-341)||(3721-3936)
[»] scaffold1711 (1 HSPs)
scaffold1711 (259-379)||(1304-1424)
[»] scaffold1164 (1 HSPs)
scaffold1164 (434-513)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (434-513)||(19802-19881)
scaffold0122 (434-513)||(24106-24185)
[»] scaffold0139 (2 HSPs)
scaffold0139 (259-357)||(14083-14181)
scaffold0139 (262-380)||(21115-21233)
[»] scaffold0876 (1 HSPs)
scaffold0876 (434-504)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (434-508)||(6261-6335)
scaffold0310 (434-471)||(4-41)
[»] scaffold0066 (3 HSPs)
scaffold0066 (126-341)||(54412-54630)
scaffold0066 (126-170)||(45007-45051)
scaffold0066 (433-465)||(45338-45370)
[»] scaffold0361 (1 HSPs)
scaffold0361 (308-391)||(3370-3453)
[»] scaffold0507 (1 HSPs)
scaffold0507 (433-506)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (449-506)||(35816-35873)
[»] scaffold0104 (1 HSPs)
scaffold0104 (129-219)||(48513-48603)
[»] scaffold1295 (1 HSPs)
scaffold1295 (449-506)||(442-499)
[»] scaffold0456 (2 HSPs)
scaffold0456 (334-375)||(1546-1587)
scaffold0456 (334-375)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (334-375)||(8216-8257)
[»] scaffold0084 (1 HSPs)
scaffold0084 (266-384)||(56106-56226)
[»] scaffold0058 (2 HSPs)
scaffold0058 (334-375)||(70307-70348)
scaffold0058 (433-465)||(57392-57424)
[»] scaffold0053 (1 HSPs)
scaffold0053 (449-506)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (433-466)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (433-465)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (433-465)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (433-465)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (433-465)||(13285-13317)
[»] scaffold0032 (3 HSPs)
scaffold0032 (433-465)||(55904-55936)
scaffold0032 (433-465)||(108075-108107)
scaffold0032 (334-375)||(93773-93814)
[»] scaffold0207 (1 HSPs)
scaffold0207 (422-465)||(18015-18058)
[»] scaffold0409 (2 HSPs)
scaffold0409 (337-375)||(1348-1386)
scaffold0409 (337-375)||(9603-9641)
[»] scaffold1272 (1 HSPs)
scaffold1272 (449-506)||(632-689)
[»] scaffold0483 (1 HSPs)
scaffold0483 (449-506)||(6999-7056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (334-375)||(22422-22463)
[»] scaffold0080 (1 HSPs)
scaffold0080 (449-506)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (449-506)||(31357-31414)
[»] scaffold1560 (1 HSPs)
scaffold1560 (129-173)||(72-116)
[»] scaffold0970 (1 HSPs)
scaffold0970 (152-208)||(2476-2532)
[»] scaffold0389 (1 HSPs)
scaffold0389 (334-374)||(10868-10908)
[»] scaffold0367 (1 HSPs)
scaffold0367 (433-465)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (433-465)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (433-465)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (433-465)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (433-465)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (433-465)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (433-465)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 324; Significance: 0; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 125 - 515
Target Start/End: Complemental strand, 16744382 - 16743991
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16744382 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagct 16744283  T
Q  225 caattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacac 323  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||| ||||||||||||||||||    
T  16744282 caattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacac 16744183  T
Q  324 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttac 423  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16744182 ttattatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttac 16744083  T
Q  424 aaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcc 515  Q
    |||||||||||||||||| |||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16744082 aaaatgatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 141 - 465
Target Start/End: Original strand, 13838905 - 13839232
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| |||||||| ||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| |||||     
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  241 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  13839005 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 13839104  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 437  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13839105 gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgat 13839204  T
Q  438 tatgataaagactaacccccttacctta 465  Q
    |||||| |||||||||||||||||||||    
T  13839205 tatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 391
Target Start/End: Complemental strand, 17912745 - 17912483
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| ||| ||||||||||| |||||||||| | |||||||| |||| || ||| |||||| |||| ||| |||||||||||||||    
T  17912745 tcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaat 17912646  T
Q  229 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 327  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| ||||    
T  17912645 tcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattat 17912546  T
Q  328 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  17912545 catcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 129 - 465
Target Start/End: Complemental strand, 14842825 - 14842487
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| | |||||| |||| ||||||||   | |||||| |||| |||| | ||||||||||| |||||||||| | |||||     
T  14842825 tcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaa 14842726  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||    
T  14842725 ttaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaatta 14842626  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 426  Q
    |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  14842625 tcttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaa 14842526  T
Q  427 atgatgatgattatgataaagactaacccccttacctta 465  Q
     ||| ||||||||||||||||||||||||||||||||||    
T  14842525 gtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 129 - 465
Target Start/End: Original strand, 2049809 - 2050147
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | | ||||||||| |||| ||||| | |||||     
T  2049809 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaa 2049908  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| |||    
T  2049909 ttaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaatta 2050008  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 426  Q
    | ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || |||||    
T  2050009 tcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaa 2050108  T
Q  427 atgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2050109 atgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 12030415 - 12030073
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | | |||||| |||| || | | | ||||||||| |||||||||| |  |    
T  12030415 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatat 12030316  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| ||||    
T  12030315 caaattaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttaca 12030216  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || |    
T  12030215 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttca 12030116  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  12030115 caaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 125 - 428
Target Start/End: Complemental strand, 15859292 - 15858986
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  15859292 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 15859193  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |||||| ||| | |||||||||||||||    
T  15859192 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcataca 15859093  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||| |||||    
T  15859092 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatt 15858994  T
Q  421 tacaaaat 428  Q
    ||||||||    
T  15858993 tacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 329 - 513
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
Q  329 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 425  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  426 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 130 - 401
Target Start/End: Complemental strand, 51158281 - 51158008
Alignment:
Q  130 catcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 229  Q
    |||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  51158281 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 51158182  T
Q  230 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 327  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  51158181 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 51158082  T
Q  328 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt 401  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  51158081 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 125 - 384
Target Start/End: Complemental strand, 15936895 - 15936634
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| |||| || ||||| ||||||||   |||||||| |||| |||| | ||||||||||| |||||||||| | ||    
T  15936895 attctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatct 15936796  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | |||||||||||||||    
T  15936795 caaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcataca 15936696  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
     |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  15936695 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 345 - 465
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  345 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 444  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  445 aagactaacccccttacctta 465  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 133 - 384
Target Start/End: Complemental strand, 15938729 - 15938476
Alignment:
Q  133 catcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaa 232  Q
    |||||||||||||| ||| |||| || ||||| ||||||||   |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||    
T  15938729 catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa 15938630  T
Q  233 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 330  Q
    | ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||    
T  15938629 caacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcat 15938530  T
Q  331 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
    |||||||||  |||||||||||||| | |||||||||||| |||||| ||||||    
T  15938529 caattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  359 agttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  359 agttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 13955021 - 13954890
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13954923  T
Q  359 agttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||| ||||||    
T  13954922 agttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 430 - 508
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  430 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 508  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 125 - 466
Target Start/End: Original strand, 15614829 - 15615170
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | |||||||||||  ||||||||| | |     
T  15614829 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcc 15614928  T
Q  225 caattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| ||||    
T  15614929 caaattaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctaca 15615028  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattt 421  Q
     |||| ||||||||||||||||||| ||| || || |||  |||||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  |    
T  15615029 attatcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--t 15615126  T
Q  422 acaaaatgatgatgattatgataaagactaacccccttaccttaa 466  Q
     |||||| |  ||||||||||||||||||||||||||||||||||    
T  15615127 gcaaaatta-catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 357
Target Start/End: Original strand, 16821138 - 16821369
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||| |||||||||| ||| | ||||||||||| ||||||||   | || ||| | || |||  | ||||||||||| ||| |||||| | |||||     
T  16821138 tcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 16821237  T
Q  229 tcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 325  Q
    ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  16821238 tcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 16821337  T
Q  326 attatcaattcatgcatacaaacatatcatca 357  Q
    || ||||||| ||||||||||||||| |||||    
T  16821338 atcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  433 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 494  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 47984645 - 47984759
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||| | ||    
T  47984645 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatct 47984744  T
Q  225 caattcaactacaac 239  Q
    |||| |||| |||||    
T  47984745 caatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 48003219 - 48003333
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||| | ||    
T  48003219 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatct 48003318  T
Q  225 caattcaactacaac 239  Q
    |||| |||| |||||    
T  48003319 caatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 2449453 - 2449402
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  2449453 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 2449402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 16744498 - 16744447
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  16744498 acatcaactatcaaccacaatcataacatataatcatacactccatcataat 16744447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 47993932 - 47994046
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||| | |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||    
T  47993932 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatct 47994031  T
Q  225 caattcaactacaac 239  Q
    |||| |||| |||||    
T  47994032 caatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 48012505 - 48012619
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||| | |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||    
T  48012505 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatct 48012604  T
Q  225 caattcaactacaac 239  Q
    |||| |||| |||||    
T  48012605 caatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  451 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 15468601 - 15468555
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcat 171  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  15468601 attctcatcatcaattcatgaatatgcatacccaagcaatgattcat 15468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 465
Target Start/End: Original strand, 54651642 - 54651796
Alignment:
Q  312 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaaca 410  Q
    ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| || | |  |||||||||||    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaaca 54651741  T
Q  411 tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |  |||| |  | ||| |||  ||||||||||| ||||| |||||||||||||||    
T  54651742 tgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 241
Target Start/End: Complemental strand, 11329214 - 11329098
Alignment:
Q  126 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| |||  |||||| |||| |||||||||| |||| | |||| | ||||||||  |||||| |||||||||||||||  || ||||| || |     
T  11329214 ttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatca 11329115  T
Q  225 caattcaactacaacat 241  Q
    ||||||||| |||||||    
T  11329114 caattcaacaacaacat 11329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 17139524 - 17139618
Alignment:
Q  147 catgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||| |||||||||| |||| | |||| | ||||||||  |||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  17139524 catgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 17139618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 22275204 - 22275250
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcat 171  Q
    ||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  22275204 attctcatcatcaattcatgaatatgcatacctaagcaatgattcat 22275250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 41270070 - 41270116
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcat 171  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  41270070 attctcatcatcaatccatgaatatgcaaacccaagcaattattcat 41270116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 55316214 - 55316260
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcat 171  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  55316214 attctcatcatcaatccatgaatatgcaaacccaagcaattattcat 55316260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 12265053 - 12264932
Alignment:
Q  126 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 225  Q
    |||||||||||||||||| |  |||||||||||||  || ||||| |  | ||||||||  |||  | ||||||||||||| | ||| |||||| | |||    
T  12265053 ttctcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 12264954  T
Q  226 aattcaactacaacatgtcaaa 247  Q
    | |||||| ||||||| |||||    
T  12264953 atttcaacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 499
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 499  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 11986245 - 11986173
Alignment:
Q  312 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
    ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986245 acaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 38811232 - 38811168
Alignment:
Q  154 acccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatc 218  Q
    |||||||| |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| |||||    
T  38811232 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatc 38811168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 125 - 391
Target Start/End: Complemental strand, 22907481 - 22907214
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907481 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 22907382  T
Q  225 caattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacac 323  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| |||||||||||||||||     
T  22907381 caattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaa 22907282  T
Q  324 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22907281 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 129 - 513
Target Start/End: Complemental strand, 16405236 - 16404852
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| ||||||  || ||||||||||| |||||||||| ||| |||||| |||| || ||| ||||||||||| ||||||||||||  |||||    
T  16405236 tcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaat 16405137  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  16405136 ttaac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 16405040  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 424  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||     
T  16405039 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac- 16404941  T
Q  425 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  16404940 aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 130 - 465
Target Start/End: Complemental strand, 16193979 - 16193643
Alignment:
Q  130 catcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 229  Q
    |||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  16193979 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 16193880  T
Q  230 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 327  Q
     ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| ||||    
T  16193879 taacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattat 16193780  T
Q  328 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 427  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  16193779 catcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaa 16193680  T
Q  428 tgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16193679 tgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 141 - 465
Target Start/End: Complemental strand, 24929043 - 24928716
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| ||||||||||||||||||||||   |||||||| |||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||     
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  241 tgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  | ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  24928943 tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 24928844  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 437  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  24928843 gcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgat 24928744  T
Q  438 tatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||| ||||||||    
T  24928743 tatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 43373736 - 43373392
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||| | |||||||| |||| || | | | ||||||||| |||||||||| | ||    
T  43373736 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatct 43373637  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| |    
T  43373636 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatata 43373537  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| ||    
T  43373536 attatcatcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaattt 43373437  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  43373436 cacaaaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 379
Target Start/End: Complemental strand, 6774514 - 6774258
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||| |||||| |||||| ||| ||||||||||| |||||||||| | |||||||| | || || ||| |||||||||||  ||||||||| | ||    
T  6774514 attctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatct 6774415  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||||||||    
T  6774414 caaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 6774315  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
     |||| ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  6774314 attatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 141 - 391
Target Start/End: Original strand, 17345581 - 17345832
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| ||||||||||| |||||||||| | |||||||| |||| || ||| || ||||| || |||||||||||| ||||||||| | | |||     
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
Q  241 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  17345680 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 17345779  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||| ||||||| ||||| |||| |||||||||||| |||||||| ||||||    
T  17345780 gcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 379
Target Start/End: Original strand, 24548977 - 24549233
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | |||||||||||  ||||||||| | |     
T  24548977 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcc 24549076  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||||||||    
T  24549077 caaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 24549176  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
     |||| ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  24549177 attatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  359 agttggagcacgaattt 375  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  359 agttggagcacgaattt 375  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 5238135 - 5238186
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238135 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 5238186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 24661463 - 24661412
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661463 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 24661412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 22907597 - 22907546
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22907597 acatcaacaatcaaccacaatcataacatataatcatacactccatcataat 22907546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 43685594 - 43685645
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43685594 acatcaacaatcaaccacaatcataacatataatcatacactccatcataat 43685645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 222948 - 222900
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  222948 attctcatcatcaatccatgaatatgcatacccaagcaattattcatca 222900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 736571 - 736523
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  736571 attctcatcatcaatccatgaatatgcatacccaagcaattattcatca 736523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 860466 - 860418
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  860466 attctcatcatcaatccatgaatatgcatacccaagcaattattcatca 860418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 23837219 - 23837308
Alignment:
Q  152 atacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||||||||| |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837219 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 22321654 - 22321608
Alignment:
Q  10 catcatcaatcaaccacaatcataacatataatcatacactccatca 56  Q
    ||||| |||||||||||||||| ||||||||||||| || |||||||    
T  22321654 catcaacaatcaaccacaatcacaacatataatcatgcattccatca 22321608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 125 - 391
Target Start/End: Original strand, 26680196 - 26680463
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680196 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 26680295  T
Q  225 caattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacac 323  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||||||||||     
T  26680296 caattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaa 26680395  T
Q  324 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26680396 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 125 - 513
Target Start/End: Complemental strand, 54118512 - 54118120
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  54118512 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataact 54118413  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| |||||| ||| | |||||||||||||||    
T  54118412 aaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcataca 54118313  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  54118312 attatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 54118213  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
     ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  54118212 cacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 13246425 - 13246769
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  13246425 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 13246524  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||||||||||||||    
T  13246525 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 13246624  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatt 420  Q
     |||| || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||    
T  13246625 attatcattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatt 13246724  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13246725 tacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 129 - 465
Target Start/End: Complemental strand, 15675353 - 15675009
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  15675353 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 15675254  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  15675253 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 15675154  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttaca 424  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||    
T  15675153 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgca 15675054  T
Q  425 aa----atgatgatgattatgataaagactaacccccttacctta 465  Q
    ||    ||||||||||||||||| |||||||||||||||||||||    
T  15675053 aaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 259 - 465
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  359 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 458  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  459 tacctta 465  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 194 - 465
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
Q  194 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 291  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| ||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  292 ttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca- 390  Q
    || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
Q  391 -taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 465  Q
     ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 129 - 364
Target Start/End: Original strand, 31115628 - 31115865
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  31115628 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 31115727  T
Q  229 tcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    ||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| |||    
T  31115728 tcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaatta 31115827  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttgg 364  Q
    | ||||||||||||||||||||||||||||| ||||||    
T  31115828 tcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 329 - 465
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  329 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 426  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  427 ----atgatgatgattatgataaagactaacccccttacctta 465  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 13048353 - 13048221
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |    
T  13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga 13048254  T
Q  359 agttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||| ||||||||||||||| ||||||    
T  13048253 agttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 125 - 375
Target Start/End: Original strand, 10644214 - 10644467
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||||   | || ||| | || |||  | ||||||||||| ||| |||||| | ||    
T  10644214 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatct 10644313  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| ||||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| ||||||||| |||||| ||| | || |||||||||||    
T  10644314 caaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatac 10644413  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    | |||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  10644414 aattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  359 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 452  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  453 cccccttacctta 465  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 111394 - 111493
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  111394 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 26680080 - 26680131
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26680080 acatcaacaatcaaccacaatcataacatataatcatacactccatcataat 26680131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 379
Target Start/End: Original strand, 47357649 - 47357906
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||  |||||||| |||| ||||||||   | || ||| | || |||  | ||||||| ||| |||||||||| | ||    
T  47357649 attctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 47357748  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  47357749 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 47357848  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  |||||| |||||||||||||||| ||||| ||   ||||||||||||||||    
T  47357849 aactaacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 10488610 - 10488661
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  10488610 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 10488661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 375
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  194 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- 290  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  291 tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 16328135 - 16328090
Alignment:
Q  15 tcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  16328135 tcaatcaactacaatcataacatataatcataccctccatcataat 16328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 10104495 - 10104451
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  10104495 tcatcatcaattcatgaatatgtatacccaagcaatgattcatca 10104451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
Q  154 acccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||||||| |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 41166172 - 41166083
Alignment:
Q  152 atacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||||||||| ||||||||||| | ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166172 atacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 15109573 - 15109486
Alignment:
Q  154 acccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||||||| |||| |||||| | |||||||   |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15109573 acccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15109486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 13809741 - 13809647
Alignment:
Q  147 catgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||| ||| |||||| |||| | |||| | |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13809741 catgcatatccaagccatgaattatcatcaacaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 374  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 216; Significance: 1e-118; HSPs: 4)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 125 - 391
Target Start/End: Complemental strand, 37333 - 37066
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37333 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 37234  T
Q  225 caattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacac 323  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||||| ||| |||||||||||||||||     
T  37233 caatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaa 37134  T
Q  324 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37133 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 37442 - 37398
Alignment:
Q  16 caatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  37442 caatcaaccacaatcacaacatataatcatacactccatcataat 37398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 125 - 391
Target Start/End: Original strand, 7293012 - 7293279
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293012 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 7293111  T
Q  225 caattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacac 323  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| |||||||||||||||||     
T  7293112 caattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaa 7293211  T
Q  324 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7293212 ttattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 129 - 506
Target Start/End: Original strand, 3059965 - 3060344
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||    
T  3059965 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaat 3060064  T
Q  229 tcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 325  Q
      ||| ||||| |  |||| |||| |||||||  || |||||||| || || |||||| ||||||||| |||||| ||| | ||||||| |  |||| ||    
T  3060065 ctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatt 3060163  T
Q  326 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaa 425  Q
    || ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  3060164 atcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaa 3060263  T
Q  426 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  3060264 aatgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 16211761 - 16212103
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||| |||| ||| |||||| ||| ||||||||||||||| |||||| | |||||||| |||| || | | ||||||||||  |||||||||| | ||    
T  16211761 attctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatct 16211860  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| ||||    
T  16211861 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttaca 16211960  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || |    
T  16211961 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttca 16212060  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16212061 caaaatgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 13037282 - 13036938
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||| ||||  ||  | ||||| ||||| |||||||||||| ||    
T  13037282 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataact 13037183  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | |||||||||||||    
T  13037182 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcataca 13037083  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  13037082 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 13036983  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  13036982 tacaaaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 11581007 - 11580661
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||| || ||||| |||||| |||||||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  11581007 attctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 11580908  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||||||||||||||    
T  11580907 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 11580808  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaat 419  Q
     |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||    ||||||||||||||||||||||||    
T  11580807 attatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaat 11580708  T
Q  420 ttac-aaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  11580707 ttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 36052662 - 36053003
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||| | |||||||| |||| || | ||||||||||||| |||||||||| | ||    
T  36052662 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatct 36052761  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| |    
T  36052762 caaattaac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatata 36052858  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| |||||||||||||||||||| |||||||| |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| ||    
T  36052859 attatcatcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaattt 36052958  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  36052959 cacaaaatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 129 - 391
Target Start/End: Complemental strand, 47481295 - 47481031
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||| | | |||||| ||||  | | | ||||||||||| |||||||||||| ||||||    
T  47481295 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaat 47481196  T
Q  229 tcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 325  Q
    ||||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||    
T  47481195 tcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatt 47481097  T
Q  326 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    || ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  47481096 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 125 - 384
Target Start/End: Complemental strand, 18254103 - 18253842
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| |||| || ||||| ||||||||   |||||||| |||| |||| | ||||||||||| |||||||||| | ||    
T  18254103 attctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatct 18254004  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | |||||||||||||||    
T  18254003 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcataca 18253904  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
     |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  18253903 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 125 - 390
Target Start/End: Original strand, 13321009 - 13321278
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| ||||||  || | |||||||  ||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||    
T  13321009 attctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatct 13321108  T
Q  225 caattcaacta-caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcat 319  Q
    ||||||||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  ||||||| ||| | ||||||||||||    
T  13321109 caattcaacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcat 13321207  T
Q  320 acacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 390  Q
    ||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
T  13321208 acaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 129 - 373
Target Start/End: Complemental strand, 16479214 - 16478968
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||| | |||||||| | || || ||| |||||||||||  ||||||||| | |||||     
T  16479214 tcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaa 16479115  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  16479114 ttaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16479015  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 373  Q
    | ||||||||||||||||||||||| ||||  |||  ||||||||||    
T  16479014 tcatcaattcatgcatacaaacataacatcgcagtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  359 agttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||| |||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  359 agttggagcacgaattt 375  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 15441779 - 15441728
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441779 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 15441728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 30262344 - 30262293
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262344 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 30262293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 463
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  263 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 362  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  363 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 460  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  461 cct 463  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 125 - 379
Target Start/End: Complemental strand, 13911282 - 13911024
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| | ||||||| ||| ||||||||   | || ||| | || |||  | ||||||||||| ||| |||||| | ||    
T  13911282 attctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatct 13911183  T
Q  225 caattcaactacaacat---gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcata 320  Q
    ||| ||||| ||||| |   |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||    
T  13911182 caaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcata 13911083  T
Q  321 cacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    || |||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
T  13911082 caattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 380
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  260 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 359  Q
    |||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  360 gttggagcacgaatttagcaa 380  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 506
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  399 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 498  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  499 agctccta 506  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 434 - 513
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 7292896 - 7292947
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  7292896 acatcaacaatcaaccacaatcacaacatataatcatacactccatcataat 7292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 11516275 - 11516326
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  11516275 acatcaacaatcaaccacaatcataacatatactcatacactccatcataat 11516326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  349 atatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  349 atatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  359 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 452  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  453 -cccccttacctta 465  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 49047905 - 49047811
Alignment:
Q  147 catgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||| |||||||||| |||| | |||||| ||||||||  |||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  49047905 catgcatacccaagccatgaattatcagcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 49047811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 10989405 - 10989453
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||||    
T  10989405 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatca 10989453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  396 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  450 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 13377552 - 13377639
Alignment:
Q  154 acccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||||||| |||| |||||| | |||||||   |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  13377552 acccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 13377639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 13274803 - 13274897
Alignment:
Q  147 catgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    |||| ||||| |||| |||| |||||| | ||||||||  |||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13274803 catgcataccaaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13274897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 461
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  433 atgattatgataaagactaacccccttac 461  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 213; Significance: 1e-116; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 129 - 515
Target Start/End: Original strand, 41394221 - 41394609
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| |||||||| || |||||||||| | |||||||| | || || ||| |||||||||||  ||||||||| | |||||     
T  41394221 tcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaac 41394320  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
      ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| |||    
T  41394321 ataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaatta 41394420  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 426  Q
    | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394421 tcatcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 41394520  T
Q  427 atgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcc 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41394521 atgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 20931340 - 20931682
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||| ||| |||||| ||| ||||||||| ||| |||||||| | |||||||| |||| || | | ||||||||||| |||||||||| | ||    
T  20931340 attctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatct 20931439  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| ||||    
T  20931440 caaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttaca 20931539  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||     
T  20931540 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttg 20931639  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  20931640 caaaatgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 20445674 - 20446019
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | |||||||||||  ||||||||||| |     
T  20445674 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataaca 20445773  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | |||||||||||||||    
T  20445774 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcataca 20445873  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  20445874 attatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 20445973  T
Q  421 t-acaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    | |||||||||||||||||||||||||||||||| |||||||||||    
T  20445974 tcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 20913032 - 20913367
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||| | |||| ||| |||| || | | ||||||||||| ||||||||||         
T  20913032 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca----- 20913126  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     |||| ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| ||||    
T  20913127 -aatt-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttaca 20913224  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||     
T  20913225 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttg 20913324  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  20913325 caaaatgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 37844719 - 37844374
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| ||||||||||||||| |||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  37844719 attctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataact 37844620  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttca-taacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||||  ||| ||||| |  |||| |||||  |||  |||||||||||| ||  || |||||| | | || || |||||| ||| | ||||||||||||||    
T  37844619 caatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatac 37844520  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaat 419  Q
    | |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||    
T  37844519 aattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaat 37844420  T
Q  420 ttacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    | ||||||||||||||||||||||||||||||||||||||||||||    
T  37844419 tcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 20531439 - 20531783
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | |||||||||||  ||||||||||| |     
T  20531439 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataaca 20531538  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | |||||||||||||||    
T  20531539 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcataca 20531638  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  20531639 attatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 20531738  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
     |||||||||||||||||||||||||||||||   ||||||||||    
T  20531739 cacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 20893894 - 20893551
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||  ||||| ||| |||||||| ||||||||||||| | |||||||| |||| ||   | ||||||||||| ||||||||||||  |    
T  20893894 attctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaat 20893795  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | |||||||||||||    
T  20893794 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcataca 20893695  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| |    
T  20893694 attatcatcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-t 20893596  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  20893595 tacaaaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 125 - 379
Target Start/End: Original strand, 2116249 - 2116506
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagc- 223  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | |||||||||||  ||||||||| |       
T  2116249 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaata 2116348  T
Q  224 tcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    |||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||    
T  2116349 tcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatac 2116448  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    | |||| ||||||||||||||||||||||| ||||| |||   ||||||||| |||||    
T  2116449 aattatcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 129 - 464
Target Start/End: Original strand, 22227808 - 22228146
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||   | |||||| |||| |||  | ||||||||||| |||||||||| | |||||     
T  22227808 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 22227907  T
Q  229 tcaactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  22227908 ttaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 22228007  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaa 425  Q
    | ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||    
T  22228008 tcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaa 22228107  T
Q  426 aatgatgatgattatgataaagactaacccccttacctt 464  Q
    | ||   |||||||||||||  |||||||||||||||||    
T  22228108 attgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 129 - 464
Target Start/End: Original strand, 22232505 - 22232843
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||   | |||||| |||| |||  | ||||||||||| |||||||||| | |||||     
T  22232505 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 22232604  T
Q  229 tcaactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  22232605 ttaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 22232704  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaa 425  Q
    | ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||    
T  22232705 tcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaa 22232804  T
Q  426 aatgatgatgattatgataaagactaacccccttacctt 464  Q
    | ||   |||||||||||||  |||||||||||||||||    
T  22232805 attgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 507  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 466
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  359 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 457  Q
    |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccc 45051750  T
Q  458 ttaccttaa 466  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 399 - 506
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  399 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 498  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  499 agctccta 506  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 41218728 - 41218808
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 51452540 - 51452591
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51452540 acatcatcaatcaactacaatcataacatataatcatacactccatcataat 51452591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 464
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  433 atgattatgataaagactaacccccttacctt 464  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 5072645 - 5072599
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcat 171  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  5072645 attctcatcatcaatccatgaatatgcaaacccaagcaattattcat 5072599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 18601375 - 18601329
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcat 171  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  18601375 attctcatcatcaatccatgaatatgcaaacccaagcaattattcat 18601329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 45051437 - 45051485
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||| |||||| |||||| ||| ||||||||||| ||||||||||    
T  45051437 attctcataatcaattcatgaatatgcatacccaagcagtgattcatca 45051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 125 - 513
Target Start/End: Complemental strand, 19794972 - 19794581
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||| |   || ||||||||||| |||||||||||| ||    
T  19794972 attctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataact 19794873  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||||||||||||||    
T  19794872 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 19794773  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||| |||||    
T  19794772 attattatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatt 19794674  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  19794673 tacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 129 - 513
Target Start/End: Complemental strand, 43643221 - 43642833
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| ||| ||||||||||| |||||||||| |||||||||| |||| || ||| | ||||||||| |||||||||||| |||||     
T  43643221 tcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaa 43643122  T
Q  229 tcaactacaac-atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||    
T  43643121 ttaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 43643022  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttaca 424  Q
    | ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| |||    
T  43643021 tcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcaca 43642922  T
Q  425 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  43642921 aaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 129 - 513
Target Start/End: Complemental strand, 20627577 - 20627190
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||| ||||| |||||| ||  |||||||||||||||||||||| | |||||| | |||| || | | || |||||||| |||||||| | | |||||     
T  20627577 tcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaa 20627478  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||  ||||| ||| | ||||||||||||||| |||    
T  20627477 ttaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaatta 20627378  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaa 425  Q
    | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| |||||||    
T  20627377 tcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaa 20627278  T
Q  426 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  20627277 aatgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 36982709 - 36982364
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||    
T  36982709 attctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataact 36982610  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||||||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| ||||    
T  36982609 caattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttaca 36982510  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  36982509 attatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 36982410  T
Q  421 tac-aaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||    
T  36982409 tacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 462733 - 463075
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||| ||| ||||| |||||| ||| ||||||||||||||||||||||   || ||||| |||| || | | ||||||||||| |||||||||||| ||    
T  462733 attcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataact 462832  T
Q  225 caattcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||||  ||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||    
T  462833 caatctaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttac 462931  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt 421  Q
    | |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  462932 aattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaattt 463031  T
Q  422 acaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  463032 acaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 8891237 - 8891581
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||| ||||  | | | ||||||||||| |||||||||||| ||    
T  8891237 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataact 8891336  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  ||||||||||||||    
T  8891337 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcataca 8891436  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  8891437 attatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 8891536  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  8891537 tacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 129 - 465
Target Start/End: Complemental strand, 24341653 - 24341309
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |   |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  24341653 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 24341554  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| |||    
T  24341553 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaatta 24341454  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttaca 424  Q
    | ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||    
T  24341453 tcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgca 24341354  T
Q  425 aa----atgatgatgattatgataaagactaacccccttacctta 465  Q
    ||    ||||||||||||||||| |||||||||||||||||||||    
T  24341353 aaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 125 - 391
Target Start/End: Complemental strand, 25265658 - 25265390
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||| ||||||||| | | |||||||| |||| || ||||||||||||||| ||| |  ||  | |     
T  25265658 attctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 25265559  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     |||||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||    
T  25265558 taattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcataca 25265459  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
     |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  25265458 attatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  359 agttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  369 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 129 - 341
Target Start/End: Complemental strand, 7508108 - 7507894
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaa 227  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||| | |||||||| | || || ||| ||||||||||  | || |||||||| |||||    
T  7508108 tcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaa 7508009  T
Q  228 ttcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    || ||| ||||| | | |||||||| ||| |||  ||||||||||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |    
T  7508008 tt-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaat 7507911  T
Q  325 tattatcaattcatgca 341  Q
    ||| |||||||||||||    
T  7507910 tatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 434 - 513
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 379
Target Start/End: Complemental strand, 19886918 - 19886661
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||   | || ||| | || |||  | ||||||| ||| |||||||||| | ||    
T  19886918 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 19886819  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| ||||    
T  19886818 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatac 19886719  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  19886718 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 14906655 - 14906604
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  14906655 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 14906604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 20015059 - 20015110
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  20015059 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 20015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 23820119 - 23820170
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  23820119 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 23820170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 19689600 - 19689565
Alignment:
Q  25 acaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||||||||||||||||||||||||    
T  19689600 acaatcataacatataatcatacactccatcataat 19689565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 466
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaa 466  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  454 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 464
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  433 atgattatgataaagactaacccccttacctt 464  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 506
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  399 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 497  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  498 tagctccta 506  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 175; Significance: 5e-94; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 48593 - 48935
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| ||||  | | | ||||||||||| |||||||||||| ||    
T  48593 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataact 48692  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||||||||||||||    
T  48693 caatctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcataca 48792  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  48793 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaattta 48892  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48893 caaaatgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 357
Target Start/End: Original strand, 36088 - 36323
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||||   | |  ||| | || |||  | |||||| |||| ||| |||||| | ||    
T  36088 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataacatctattgaacatgaatcacatct 36187  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | || ||| ||| | ||||||||||||||    
T  36188 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatac 36287  T
Q  322 acttattatcaattcatgcatacaaacatatcatca 357  Q
    |  ||  |||||||||| |||||||||||| |||||    
T  36288 aactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 1119 - 1462
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| | ||||||||||| |||||||| | |||| ||| |||| || | | ||||||||||| |||||||||| | ||    
T  1119 attctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatct 1218  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||||||||    
T  1219 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 1318  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt- 421  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||     
T  1319 attattatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttc 1418  T
Q  422 acaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1419 acaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 127 - 465
Target Start/End: Complemental strand, 3848 - 3508
Alignment:
Q  127 tctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctca 226  Q
    |||| |||||||||||| || ||| ||||||||||||| |||| |||   |||||||| |||| |||| | ||||||||||| |||||||||| | ||||    
T  3848 tctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctca 3749  T
Q  227 attcaactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    | | ||| ||||| |  |||| |   ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |    
T  3748 aattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaat 3649  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttaca 424  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  3648 tatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttaca 3549  T
Q  425 aaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  3548 aaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 168; Significance: 8e-90; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 125 - 462
Target Start/End: Original strand, 19201 - 19543
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||    
T  19201 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataact 19300  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| ||||    
T  19301 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttaca 19400  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  19401 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 19500  T
Q  421 tac-aaaatgatgatgattatgataaagactaacccccttacc 462  Q
    ||| ||||| |||||||||||||| ||||||||||||||||||    
T  19501 tacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 125 - 391
Target Start/End: Original strand, 21285 - 21553
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||    
T  21285 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataact 21384  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| ||||    
T  21385 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttaca 21484  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21485 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 163; Significance: 8e-87; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 125 - 466
Target Start/End: Complemental strand, 37181 - 36836
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||| ||||||| |||||| ||||| ||    
T  37181 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataact 37082  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    |||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | ||||    
T  37081 caatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttaca 36982  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| ||    
T  36981 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaattt 36882  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttaccttaa 466  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  36881 cacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 434 - 513
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 163; Significance: 8e-87; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 141 - 465
Target Start/End: Original strand, 171916 - 172242
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| ||||| |||||||||||||||| | |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  241 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  172016 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 438  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  172116 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 172215  T
Q  439 atgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||    
T  172216 atgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 141 - 465
Target Start/End: Original strand, 177619 - 177945
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| ||||| |||||||||||||||| | |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  241 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  177719 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 438  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  177819 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 177918  T
Q  439 atgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||    
T  177919 atgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 8e-87; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 23506960 - 23507302
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||| | |||||||| |||| || | | ||||||||||| |||||||||| | ||    
T  23506960 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatct 23507059  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||||||||    
T  23507060 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 23507159  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||    
T  23507160 attatcatcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatctta 23507259  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  23507260 caaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 27182815 - 27182471
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||| ||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  27182815 attctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 27182716  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | |||||||||||||    
T  27182715 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcataca 27182616  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  27182615 attatcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 27182516  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  27182515 tacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 129 - 465
Target Start/End: Complemental strand, 18531331 - 18530988
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  18531331 tcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaat 18531232  T
Q  229 tcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 325  Q
    ||||| ||||| |  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||    
T  18531231 tcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatt 18531133  T
Q  326 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttac 423  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| || |    
T  18531132 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgc 18531033  T
Q  424 aaaatgatgat---gattatgataaagactaacccccttacctta 465  Q
    |||||||||||   ||||||||| |||||||||||||||||||||    
T  18531032 aaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 129 - 465
Target Start/End: Complemental strand, 22054097 - 22053753
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||| | |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
T  22054097 tcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaat 22053998  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  ||    
T  22053997 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaacta 22053898  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttaca 424  Q
    | |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||    
T  22053897 tcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttca 22053798  T
Q  425 aa----atgatgatgattatgataaagactaacccccttacctta 465  Q
    ||    ||||||||||||||||| |||||||||||||||||||||    
T  22053797 aaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  229 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 327  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  328 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 226 - 389
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 389  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 141 - 391
Target Start/End: Original strand, 34939289 - 34939540
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| ||||||||||| |||||||||| | |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | |  ||     
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
Q  241 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  34939388 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 34939487  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||    
T  34939488 gcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  359 agttggagcacgaatttagca 379  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 379
Target Start/End: Complemental strand, 4200242 - 4199985
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||| ||||||| ||| | ||||||||||| ||||||||   | || ||| | || |||  | ||||||||||| ||| |||||| | ||    
T  4200242 attctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatct 4200143  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||    
T  4200142 caaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatac 4200043  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
T  4200042 aactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 379
Target Start/End: Complemental strand, 22366738 - 22366481
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||   | || ||| | || |||  | ||||||| ||| ||||| |||| | ||    
T  22366738 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaact 22366639  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  22366638 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 22366539  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22366538 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 379
Target Start/End: Original strand, 25426623 - 25426880
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||   | || ||| | || |||  | ||||||| ||| |||||||||| | ||    
T  25426623 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 25426722  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  25426723 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 25426822  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  25426823 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  261 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 360  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  361 ttggagcacgaattt 375  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 376
Target Start/End: Complemental strand, 18778249 - 18777995
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||   | || ||| | ||  ||  | ||||||| ||| |||||||||| | ||    
T  18778249 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaact 18778150  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  18778149 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 18778050  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 376  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   |||||||||||||    
T  18778049 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 20623017 - 20623068
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623017 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 20623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 21233743 - 21233692
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233743 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 21233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 379
Target Start/End: Original strand, 12369 - 12626
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||   | || ||| | || |||  | ||||||| ||| |||||||||| | ||    
T  12369 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 12468  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| ||||    
T  12469 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatac 12568  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  12569 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 379
Target Start/End: Original strand, 19499894 - 19500151
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||| ||||||| ||| ||||   | || ||| | || |||  | ||||||| ||| |||||||||| | ||    
T  19499894 attctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 19499993  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  19499994 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 19500093  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  19500094 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 379
Target Start/End: Complemental strand, 21073852 - 21073595
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||   | || ||| | || |||  | ||||||| ||| |||||||||| | ||    
T  21073852 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaact 21073753  T
Q  225 caattcaactacaacatgtca--aattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |   |  |||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  21073752 caaattaacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 21073653  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||| ||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  21073652 aactaacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 37052792 - 37052842
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataa 59  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37052792 acatcatcaatcaaccacaatcataacatataatcataccctccatcataa 37052842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  359 agttggagcacgaattta 376  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 25900620 - 25900569
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  25900620 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 25900569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 508
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 508  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 16536245 - 16536296
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  16536245 acatcatcaatcaactacaatcataacatacaatcataccctccatcataat 16536296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 241
Target Start/End: Original strand, 23493913 - 23494029
Alignment:
Q  126 ttctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||  ||||||  ||| | |||||||| |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || |     
T  23493913 ttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatca 23494012  T
Q  225 caattcaactacaacat 241  Q
    ||||||||| |||||||    
T  23494013 caattcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 29190531 - 29190483
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||| |||||| |||||| ||| ||||||||||||||||||||||    
T  29190531 attctcataatcaattcatgaatatgcatacccaagcaatgattcatca 29190483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 17471849 - 17471803
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcat 171  Q
    ||||||||||||||| |||||| |||  |||||||||||||||||||    
T  17471849 attctcatcatcaattcatgaatatgcgtacccaagcaatgattcat 17471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 35791359 - 35791238
Alignment:
Q  126 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 225  Q
    |||||||||||||||||| |  |||||||||||||  || ||||| |  | ||||||||  |||  | ||||||||||||| | ||| |||||| | |||    
T  35791359 ttctcatcatcaatccataattatgtatacccaagtcataattcaccctcaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 35791260  T
Q  226 aattcaactacaacatgtcaaa 247  Q
    | |||||| ||||||| |||||    
T  35791259 atttcaacaacaacatatcaaa 35791238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 43443649 - 43443604
Alignment:
Q  128 ctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    ||||||||||||||||||| ||| | ||||||||||| ||||||||    
T  43443649 ctcatcatcaatccatgaatatgcaaacccaagcaattattcatca 43443604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
Q  177 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 32950879 - 32950951
Alignment:
Q  312 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
    ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950879 acaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 155; Significance: 5e-82; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 41724 - 42066
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||| || |||||| |||||| ||| |||||||| ||||||||||||| |||||||| | |||| || | | | ||||||||| |||||||||||| ||    
T  41724 attctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataact 41823  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| ||||||||| | |||| ||| | |||||||||   |||    
T  41824 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgaca 41923  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  41924 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaattta 42023  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  42024 caaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 2e-81; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 23153442 - 23153786
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| | ||| |||||| ||||||||||||| |||||||||||| | |||||||| |||| || | | || |||||||| |||||||||||| ||    
T  23153442 attctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataact 23153541  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||||||||||||||    
T  23153542 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 23153641  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  23153642 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatt 23153741  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  23153742 tacaaaatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 125 - 464
Target Start/End: Complemental strand, 14626386 - 14626045
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | |||||||||||  ||||||||| | ||    
T  14626386 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatct 14626287  T
Q  225 caattcaactacaacatgtca-aattcatccatttgcaca--attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  || |||||| ||| |||||||  ||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||    
T  14626286 caagttaacaacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatac 14626188  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt 421  Q
    | |||| ||||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||    
T  14626187 aattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaattt 14626088  T
Q  422 acaaaatgatgatgattatgataaagactaacccccttacctt 464  Q
      ||| ||| ||||||| ||||||  |||||||||||||||||    
T  14626087 gtaaagtgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 125 - 391
Target Start/End: Complemental strand, 35009707 - 35009439
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || ||||||||||||||| ||| |  ||  | |     
T  35009707 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 35009608  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     |||||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||    
T  35009607 taattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcataca 35009508  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
     |||| |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||| ||||||    
T  35009507 attatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 141 - 391
Target Start/End: Complemental strand, 1657999 - 1657748
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| ||||||||||| |||||||||| | |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | |||     
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
Q  241 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  1657900 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 1657801  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  1657800 gcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 141 - 391
Target Start/End: Original strand, 15862484 - 15862734
Alignment:
Q  141 catgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||| ||| ||||||||||| |||||||||| | |||||||| |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | |||     
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
Q  241 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 338  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  15862582 tagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 15862681  T
Q  339 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||| ||||||    
T  15862682 gcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 125 - 466
Target Start/End: Complemental strand, 1650361 - 1650020
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||| |||||| |||||| ||| ||||||||||| |||||||||| | |||||||| | || || ||| |||||||||||  ||||||||| | ||    
T  1650361 attctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatct 1650262  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||  ||||||||| |||||| ||| | |||||||||||||||    
T  1650261 caaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcataca 1650162  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattt 421  Q
     |||| |||||||||||||||||||| || ||||| |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  |    
T  1650161 attatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--t 1650064  T
Q  422 acaaaatgatgatgattatgataaagactaacccccttaccttaa 466  Q
     |||||| |  ||||||||||||||||||||||||||||||||||    
T  1650063 gcaaaatta-catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  396 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 379
Target Start/End: Original strand, 25175558 - 25175815
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||   | || ||| | || |||  | ||||||| ||| |||||||||| | ||    
T  25175558 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 25175657  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  25175658 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 25175757  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  ||||||||||||||||||||||| || || ||   ||||||||||||||||    
T  25175758 aactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 379
Target Start/End: Complemental strand, 27654240 - 27653983
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||| |||||||||| ||| ||||||||||||| ||||||||   | || ||| | || |||  | ||||||| | | |||||||||| | ||    
T  27654240 attctcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaact 27654141  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||    
T  27654140 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 27654041  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 379  Q
    |  ||  |||||||||||||||||| |||| ||||| ||   ||||||||||||||||    
T  27654040 aactaacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 391
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  308 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 16825874 - 16825752
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatc 356  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||    
T  16825874 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatc 16825775  T
Q  357 aaagttggagcacgaatttagca 379  Q
    | ||   ||||||||||||||||    
T  16825774 acagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 391
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
Q  194 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 291  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  292 tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 389  Q
    ||  ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  390 at 391  Q
    ||    
T  29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 506
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 18381909 - 18381821
Alignment:
Q  152 atacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 240  Q
    |||||||||| |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381909 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 27740837 - 27740941
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| ||| |||||||| | ||||||||||  | ||||||||   ||  | |||| |||||||||| ||| |||||||| ||||||    
T  27740837 tcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaat 27740936  T
Q  229 tcaac 233  Q
    |||||    
T  27740937 tcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 464
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  433 atgattatgataaagactaacccccttacctt 464  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 465
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  435 gattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 22362019 - 22361926
Alignment:
Q  125 attctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaat 217  Q
    ||||||||||||||| ||||||  ||| | |||||||| |||| |||||| | |||| |||  |||||| ||||||||||||||| ||| ||||    
T  22362019 attctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 16826011 - 16825963
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||||||||||||||||| ||| ||| | ||||||| ||||||||    
T  16826011 attctcatcatcaatccatgaatatgcataacaaagcaattattcatca 16825963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
Q  177 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 241  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 129 - 465
Target Start/End: Complemental strand, 1219 - 882
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||   | |||||  |||| |||| | ||||||| ||| |||||||| | | ||||||    
T  1219 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaat 1120  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| |  |||| |||||| |||  |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  1119 t-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 1021  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 426  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  |||    
T  1020 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaa 921  T
Q  427 atgatgatgattatgataaagactaacccccttacctta 465  Q
     ||| ||||||||||||||||||||||||||||||||||    
T  920 gtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 147; Significance: 3e-77; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 247710 - 247366
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||| | |||||| ||| |||||||||||||||||||||| | |||||||| |||| ||   | ||||||||||| |||||||||||| ||    
T  247710 attctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataact 247611  T
Q  225 caattcaactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||  ||| ||||| |  |||| |   ||| |||  ||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||  ||||||||||    
T  247610 caatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcataca 247511  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  247510 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 247411  T
Q  421 tacaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  247410 tacaaaatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 12110 - 12450
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||| |   | |||||| |||| |||  | ||||||||||| |||||||||| | ||    
T  12110 attctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatct 12209  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    |||||  || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||| | | | |||||||||||||||    
T  12210 caatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcataca 12307  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaattt 421  Q
     |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| ||    
T  12308 attatcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagtt 12406  T
Q  422 acaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  12407 acaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 144; Significance: 2e-75; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 26683 - 26340
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| ||| || ||| ||||||||||||||||||||||   |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  26683 attctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataact 26584  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    || |  ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| ||||    
T  26583 cattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttaca 26484  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaattt 421  Q
     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  26483 attatcatcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaattt 26384  T
Q  422 acaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  26383 acaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 125 - 391
Target Start/End: Complemental strand, 8445 - 8180
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||| | ||| |||||||||| ||||||||| | | |||||||| |||| || ||||||||||||||| ||| |  ||  | |     
T  8445 attctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 8346  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     ||||||||   |||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||| || ||| | |||||||||||||||    
T  8345 taattcaac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcataca 8249  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
     |||| | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  8248 attatcaccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 136 - 465
Target Start/End: Original strand, 272031 - 272362
Alignment:
Q  136 caatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta 235  Q
    |||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| |    
T  272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
Q  236 caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaa 333  Q
    |||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||    
T  272131 caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa 272230  T
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatga 433  Q
    ||||| |||||||||||||||| | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  272231 ttcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatga 272330  T
Q  434 tgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||||||||||||    
T  272331 tgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 144; Significance: 2e-75; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 128436 - 128095
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||| |||| ||||||||   |||||||| |||| |||| | ||||||||||| |||||||||| | ||    
T  128436 attctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatct 128337  T
Q  225 caattcaactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||||| ||| ||||| |  |||| |   ||| |||  ||||||||||| |||||  ||  | |||| |||| |||||| ||| | |||||||||| ||||    
T  128336 caatt-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttaca 128238  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||     
T  128237 attatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttg 128138  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  128137 caaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 357
Target Start/End: Complemental strand, 31933 - 31697
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||| |||||||||| ||| | ||||||||||| ||||||||   | || ||  | || |||  | ||||||||||| ||| |||||| | ||    
T  31933 attctcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatgaatcacatct 31834  T
Q  225 caattcaactacaac---atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcata 320  Q
    ||| ||||| |||||   | |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||    
T  31833 caaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcata 31734  T
Q  321 cacttattatcaattcatgcatacaaacatatcatca 357  Q
    ||  ||  |||||||||||||| |||||||| |||||    
T  31733 caactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 143; Significance: 7e-75; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 129 - 465
Target Start/End: Complemental strand, 6327 - 5990
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||   | ||||   |||| |||| | ||||||| ||| |||||||||| | ||||||    
T  6327 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaat 6228  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  6227 t-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 6129  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 426  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  6128 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaa 6029  T
Q  427 atgatgatgattatgataaagactaacccccttacctta 465  Q
     |||  |||||||||||||||||||||||||||||||||    
T  6028 gtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 125 - 465
Target Start/End: Original strand, 8873 - 9215
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| ||||||||||||| ||||||||   |||||||| |||| |||| | ||||||||||| |||||||||| | ||    
T  8873 attctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatct 8972  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||| |||||| || |||||| ||| | |||||||||| ||||    
T  8973 caaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttaca 9072  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattta 422  Q
     |||| ||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||  ||||||| |||||||| |||||| |||||||||||     
T  9073 attatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttg 9172  T
Q  423 caaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  9173 caaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 138; Significance: 7e-72; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 125 - 455
Target Start/End: Complemental strand, 5329 - 4996
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| ||||||||||||||||||||||   |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  5329 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataact 5230  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    || |  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| ||||    
T  5229 cattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttaca 5130  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaattt 421  Q
     |||| ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||  ||||||||||||||||||||||||||    
T  5129 attatcatcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaattt 5030  T
Q  422 acaaaatgatgatgattatgataaagactaaccc 455  Q
    |||||||||| |||||||||||||||||||||||    
T  5029 acaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 137; Significance: 3e-71; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 259 - 463
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  359 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 458  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  459 tacct 463  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 131; Significance: 1e-67; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 125 - 465
Target Start/End: Complemental strand, 123432 - 123087
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| |||||||||| || |||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  123432 attctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataact 123333  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||||||||||||||    
T  123332 taatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 123233  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 420  Q
     |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||    
T  123232 attatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatt 123133  T
Q  421 tac-aaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||| ||||| |||||||||||| | |||||||||||||||||||||    
T  123132 tacaaaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 129; Significance: 2e-66; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 129 - 465
Target Start/End: Original strand, 8848 - 9192
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| | |||||||| ||||  | ||| ||||||||||| |||  ||||||| ||||||    
T  8848 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaat 8947  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  8948 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 9047  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttaca 424  Q
    | ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || ||    
T  9048 tcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgca 9147  T
Q  425 aa----atgatgatgattatgataaagactaacccccttacctta 465  Q
    ||    ||||||||||||||||| ||||||||| | |||||||||    
T  9148 aaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 125 - 417
Target Start/End: Original strand, 148716 - 149012
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||  |||||||||||||||||||||| | ||||| || |||| || | | ||||||||||| |||||||||| | ||    
T  148716 attctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatct 148815  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| ||||    
T  148816 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttaca 148915  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 417  Q
     |||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148916 attatcatcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 365 - 465
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  365 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 464  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  465 a 465  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 123; Significance: 6e-63; HSPs: 6)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 226 - 384
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 22588 - 22639
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  22588 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 22639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 26843 - 26894
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  26843 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 26894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 123; Significance: 6e-63; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  226 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 324  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  325 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 1797 - 1746
Alignment:
Q  9 acatcatcaatcaaccacaatcataacatataatcatacactccatcataat 60  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1797 acatcatcaatcaactacaatcataacatataatcataccctccatcataat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 118; Significance: 6e-60; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 259 - 465
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  359 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 456  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  457 cttacctta 465  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 340 - 465
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  340 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 437  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  438 tatgataaagactaacccccttacctta 465  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 464
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  433 atgattatgataaagactaacccccttacctt 464  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 125 - 384
Target Start/End: Original strand, 48182 - 48443
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| ||||||| ||||| ||||||||   |||||||| |||| |||| | ||||||||||| |||||||||| | ||    
T  48182 attctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatct 48281  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | |||||||||||||||    
T  48282 caaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcataca 48381  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
     |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  48382 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 434 - 513
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 101; Significance: 8e-50; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 125 - 391
Target Start/End: Original strand, 13501 - 13769
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| |||||| ||| |||||||||  ||||||||||| | |||||||| |||| || ||||||||||||||| ||| |  ||  | |     
T  13501 attctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 13600  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     |||||||| |||||||  |||| |||||| |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||    
T  13601 taattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcataca 13700  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
     |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  13701 attatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 125 - 391
Target Start/End: Original strand, 41643 - 41911
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | ||||||||  ||| || ||||||||||||||| ||| |  ||  | |     
T  41643 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatca 41742  T
Q  225 caattcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
     |||||||| |||||||  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||    
T  41743 taattcaacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatac 41841  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    | |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| ||||||    
T  41842 aattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 465
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  425 aaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 1e-45; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 129 - 384
Target Start/End: Original strand, 107746 - 108003
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||   |||||||| |||| |||| | ||||||||||| |||||||||| | |||||     
T  107746 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaa 107845  T
Q  229 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 326  Q
    | ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| |||    
T  107846 ttaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaatta 107945  T
Q  327 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 384  Q
    | ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  107946 tcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc 353  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  354 atcaaagttggagcacgaattt 375  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 376  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 125 - 391
Target Start/End: Complemental strand, 802 - 534
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||| ||||| | |||| ||| |||||||||||||||||||||| | |||||||| ||||||| | | ||||||||||  |||||||||||| ||    
T  802 attctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataact 703  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
     |||  |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| |||||| ||| | |||||||||||||||    
T  702 taatctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 603  T
Q  323 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  602 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 259 - 384
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  359 agttggagcacgaatttagcaacaat 384  Q
    ||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 129 - 391
Target Start/End: Complemental strand, 34725 - 34460
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaa 227  Q
    |||||||||||||||||| ||| ||||||||| | |||||||||| | |||||||| | || || ||| ||||||||||  | || |||||||| |||||    
T  34725 tcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaa 34626  T
Q  228 ttcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 325  Q
    |||||| ||||| |  |||| |||| | |||  | |||||||||| ||||||  |||| |||| | || |||||| ||| | ||||||||||||||| ||    
T  34625 ttcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaatt 34526  T
Q  326 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    || ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
T  34525 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 125 - 380
Target Start/End: Original strand, 2957 - 3215
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgca-caagaatcatagc 223  Q
    |||||||| |||||| |||||| ||| |||| |||||| |||||||||| | |||||||| | || || ||| ||||||||||  | || |||||||| |    
T  2957 attctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatc 3056  T
Q  224 tcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    |||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||    
T  3057 tcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatac 3156  T
Q  322 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 380  Q
    | |||| ||||||||||| ||||||||||| ||||| ||   |||||||||||||||||    
T  3157 aattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 125 - 357
Target Start/End: Complemental strand, 9605 - 9371
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | ||||||| |||  ||||||||| | ||    
T  9605 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatct 9506  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||||||||    
T  9505 caaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 9406  T
Q  323 cttattatcaattcatgcatacaaacatatcatca 357  Q
     |||| ||||||||||||||||||||||| |||||    
T  9405 attatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 125 - 357
Target Start/End: Complemental strand, 16503 - 16269
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| || | | ||||||| |||  ||||||||| | ||    
T  16503 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatct 16404  T
Q  225 caattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 322  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||||||||    
T  16403 caaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 16304  T
Q  323 cttattatcaattcatgcatacaaacatatcatca 357  Q
     |||| ||||||||||||||||||||||| |||||    
T  16303 attatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 432 - 513
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  432 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 432 - 507
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  432 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 507  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 507  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 507  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  359 agttggagcacgaatttagca 379  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 167 - 283
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  359 agttggagcacgaattt 375  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 341
Target Start/End: Complemental strand, 5467 - 5254
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| | ||||||||||| |||||| |   |||||||| |||| |||  | ||||||||||| |||||||||| | |||||     
T  5467 tcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 5369  T
Q  229 tcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 325  Q
    | ||| |||||    |||| |||| ||| |||  ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  5368 ttaacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 5270  T
Q  326 attatcaattcatgca 341  Q
    || |||||||||||||    
T  5269 atcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 374  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 9377 - 9480
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| | |||||||| |||| || | | ||||||||||| |||||||||||| ||    
T  9377 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 9476  T
Q  225 caat 228  Q
    ||||    
T  9477 caat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 125 - 356
Target Start/End: Original strand, 42992 - 43226
Alignment:
Q  125 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 224  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||||   | || ||| | || |||  | ||||||| ||| ||| |||||| | ||    
T  42992 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatct 43091  T
Q  225 caattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatac 321  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||    
T  43092 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatac 43191  T
Q  322 acttattatcaattcatgcatacaaacatatcatc 356  Q
    | |||| ||||||||||||||| ||||||| ||||    
T  43192 aattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 432 - 513
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  432 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 341
Target Start/End: Original strand, 3721 - 3936
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 228  Q
    |||||||||||||||||| ||| | ||||||| ||| ||||||||   | |||||| |||| |||  | ||||||||||| |||||||||| | |||||     
T  3721 tcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 3820  T
Q  229 tcaactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacactt 325  Q
    | ||| ||||| |  |||| |||| | ||| | |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| ||    
T  3821 ttaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaatt 3920  T
Q  326 attatcaattcatgca 341  Q
    || |||||||||||||    
T  3921 atcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 358  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  359 agttggagcacgaatttagca 379  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 434 - 513
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 434 - 513
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 434 - 513
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 513  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  259 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 357  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 380
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  262 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 361  Q
    |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  362 tggagcacgaatttagcaa 380  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 504
Target Start/End: Original strand, 94 - 164
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 504  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 508
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 508  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  434 tgattatgataaagactaacccccttaccttaattatc 471  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 341
Target Start/End: Original strand, 54412 - 54630
Alignment:
Q  126 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 225  Q
    |||||||||||||||||| || ||||||||||||   |||||||| |  | ||||||||  |||  | ||||||||||||| | ||| |||||| | |||    
T  54412 ttctcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 54511  T
Q  226 aattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatac 321  Q
    | |||||| ||||||| || ||||||| | |||  | |||| |||||||||||  ||||| ||||||  || ||||||| ||| | ||| ||||||||||    
T  54512 atttcaacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatac 54610  T
Q  322 acttattatcaattcatgca 341  Q
    | |||| |||||||||||||    
T  54611 aattatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 45007 - 45051
Alignment:
Q  126 ttctcatcatcaatccatgaacatgtatacccaagcaatgattca 170  Q
    |||||||||||||||||| || |||||||||||||  ||||||||    
T  45007 ttctcatcatcaatccataaatatgtatacccaagtcatgattca 45051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 391
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  308 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 391  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 48513 - 48603
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattgcacaagaatca 219  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||   | |||||| |||| |||| | |||||||| || ||||||||||    
T  48513 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 442 - 499
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  266 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 363  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  364 gagcacgaatttagcaacaat 384  Q
    ||||||||||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 466
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  433 atgattatgataaagactaacccccttaccttaa 466  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 465
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  422 acaaaatgatgatgattatgataaagactaacccccttacctta 465  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  337 atgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  337 atgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 632 - 689
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 375  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 506
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  449 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 506  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

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Target: scaffold1560 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 116 - 72
Alignment:
Q  129 tcatcatcaatccatgaacatgtatacccaagcaatgattcatca 173  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||    
T  116 tcatcatcaatccatgaatatgcaaacccaagcaattattcatca 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 2476 - 2532
Alignment:
Q  152 atacccaagcaatgattcatcagctacaacatctattagcatcaacaacatcaattg 208  Q
    |||||||||| |||| |||||| | ||||||||  |||||| |||||||||||||||    
T  2476 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0389 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 10868 - 10908
Alignment:
Q  334 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 374  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  433 atgattatgataaagactaacccccttacctta 465  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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