View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16912_high_15 (Length: 486)

Name: NF16912_high_15
Description: NF16912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16912_high_15
NF16912_high_15
[»] chr2 (32 HSPs)
chr2 (26-472)||(32706083-32706524)
chr2 (1-97)||(32718277-32718373)
chr2 (1-97)||(32724682-32724778)
chr2 (242-319)||(32718574-32718651)
chr2 (242-319)||(32724979-32725056)
chr2 (111-164)||(32718419-32718472)
chr2 (111-164)||(32724824-32724877)
chr2 (420-472)||(12734929-12734981)
chr2 (420-479)||(1404155-1404214)
chr2 (441-472)||(14530530-14530561)
chr2 (429-472)||(28960212-28960255)
chr2 (441-476)||(45543070-45543105)
chr2 (441-474)||(3243652-3243685)
chr2 (443-472)||(8197542-8197571)
chr2 (443-472)||(8202302-8202331)
chr2 (441-478)||(10403888-10403925)
chr2 (420-477)||(12520058-12520115)
chr2 (441-470)||(35715856-35715885)
chr2 (420-472)||(227418-227470)
chr2 (420-472)||(3635324-3635376)
chr2 (420-472)||(4807824-4807876)
chr2 (420-472)||(9531601-9531653)
chr2 (420-472)||(9556370-9556422)
chr2 (420-472)||(12474928-12474980)
chr2 (420-472)||(17670697-17670749)
chr2 (420-472)||(25834907-25834959)
chr2 (420-472)||(28508907-28508959)
chr2 (420-472)||(30306261-30306313)
chr2 (420-472)||(38328371-38328423)
chr2 (420-472)||(38435181-38435233)
chr2 (420-472)||(41763044-41763096)
chr2 (420-472)||(43573131-43573183)
[»] chr6 (12 HSPs)
chr6 (240-324)||(14903439-14903523)
chr6 (21-97)||(14903644-14903720)
chr6 (420-472)||(579647-579699)
chr6 (440-476)||(29196002-29196038)
chr6 (420-472)||(5096063-5096115)
chr6 (420-472)||(9706999-9707051)
chr6 (420-472)||(12890804-12890856)
chr6 (420-472)||(28085605-28085657)
chr6 (420-472)||(31819060-31819112)
chr6 (420-472)||(34143766-34143818)
chr6 (420-472)||(34156382-34156434)
chr6 (420-472)||(34934831-34934883)
[»] chr5 (13 HSPs)
chr5 (384-472)||(3000932-3001020)
chr5 (240-324)||(2999658-2999748)
chr5 (1-69)||(2999393-2999461)
chr5 (277-324)||(7432420-7432467)
chr5 (99-164)||(2999481-2999553)
chr5 (340-386)||(3000803-3000849)
chr5 (420-472)||(12492385-12492437)
chr5 (420-472)||(408495-408547)
chr5 (420-472)||(3302073-3302125)
chr5 (420-472)||(4496613-4496665)
chr5 (420-472)||(14665941-14665993)
chr5 (420-472)||(28976860-28976912)
chr5 (420-472)||(29816611-29816663)
[»] chr3 (16 HSPs)
chr3 (429-472)||(48712076-48712119)
chr3 (420-472)||(25191606-25191658)
chr3 (418-472)||(52139027-52139081)
chr3 (441-478)||(43529296-43529333)
chr3 (420-472)||(22301-22353)
chr3 (420-472)||(311310-311362)
chr3 (420-472)||(2133613-2133665)
chr3 (420-472)||(5169061-5169113)
chr3 (420-472)||(12096706-12096758)
chr3 (441-477)||(23610928-23610964)
chr3 (420-472)||(31146928-31146980)
chr3 (420-472)||(31566162-31566214)
chr3 (420-472)||(40106621-40106673)
chr3 (420-472)||(48508464-48508516)
chr3 (420-472)||(53262370-53262422)
chr3 (420-472)||(54128608-54128660)
[»] scaffold0041 (1 HSPs)
scaffold0041 (420-472)||(16807-16859)
[»] chr8 (13 HSPs)
chr8 (278-322)||(39851723-39851767)
chr8 (441-472)||(35643609-35643640)
chr8 (441-470)||(1313814-1313843)
chr8 (420-472)||(1928588-1928640)
chr8 (420-472)||(10668498-10668550)
chr8 (420-472)||(11523724-11523776)
chr8 (420-472)||(14742083-14742135)
chr8 (420-472)||(25473404-25473456)
chr8 (429-469)||(26055659-26055699)
chr8 (420-472)||(32276914-32276966)
chr8 (420-472)||(36545378-36545430)
chr8 (420-472)||(44529454-44529506)
chr8 (420-472)||(45419464-45419516)
[»] chr4 (13 HSPs)
chr4 (420-472)||(6957827-6957879)
chr4 (420-472)||(43434153-43434205)
chr4 (429-472)||(32339797-32339840)
chr4 (443-473)||(4548274-4548304)
chr4 (420-472)||(436458-436510)
chr4 (420-472)||(21528517-21528569)
chr4 (420-472)||(30634107-30634159)
chr4 (420-472)||(31959815-31959867)
chr4 (278-322)||(44476235-44476279)
chr4 (420-472)||(50238616-50238668)
chr4 (420-472)||(50238702-50238754)
chr4 (420-472)||(52569516-52569568)
chr4 (420-472)||(55007975-55008027)
[»] chr1 (22 HSPs)
chr1 (420-472)||(3777261-3777313)
chr1 (420-468)||(6025834-6025882)
chr1 (441-472)||(22930643-22930674)
chr1 (441-472)||(31274402-31274433)
chr1 (441-472)||(43898459-43898490)
chr1 (420-470)||(39140744-39140794)
chr1 (420-472)||(696499-696551)
chr1 (420-472)||(1210974-1211026)
chr1 (420-472)||(25979232-25979284)
chr1 (420-472)||(29577481-29577533)
chr1 (420-472)||(30202131-30202183)
chr1 (420-472)||(32079178-32079230)
chr1 (420-472)||(34444585-34444637)
chr1 (440-472)||(36339805-36339837)
chr1 (420-472)||(41560458-41560510)
chr1 (420-472)||(43481799-43481851)
chr1 (420-472)||(44941777-44941829)
chr1 (420-472)||(49347394-49347446)
chr1 (420-472)||(50636310-50636362)
chr1 (420-472)||(50846791-50846843)
chr1 (420-472)||(52561590-52561642)
chr1 (420-472)||(52921309-52921361)
[»] chr7 (23 HSPs)
chr7 (429-472)||(12966254-12966297)
chr7 (420-470)||(40149016-40149066)
chr7 (420-472)||(1011275-1011327)
chr7 (420-472)||(2885723-2885775)
chr7 (420-472)||(5418303-5418355)
chr7 (420-472)||(11594189-11594241)
chr7 (420-472)||(12841276-12841328)
chr7 (420-472)||(22349849-22349901)
chr7 (420-472)||(27649009-27649061)
chr7 (420-472)||(28208329-28208381)
chr7 (420-472)||(29650613-29650665)
chr7 (420-472)||(31005434-31005486)
chr7 (420-472)||(31682603-31682655)
chr7 (420-472)||(31869103-31869155)
chr7 (420-472)||(32631793-32631845)
chr7 (420-468)||(33073158-33073206)
chr7 (420-472)||(33732061-33732113)
chr7 (441-473)||(34745997-34746029)
chr7 (420-472)||(36101778-36101830)
chr7 (420-472)||(37618174-37618226)
chr7 (420-472)||(39906373-39906425)
chr7 (420-472)||(40979929-40979981)
chr7 (420-472)||(48919341-48919393)
[»] scaffold0168 (1 HSPs)
scaffold0168 (420-472)||(28890-28942)
[»] scaffold0018 (1 HSPs)
scaffold0018 (420-472)||(31697-31749)


Alignment Details
Target: chr2 (Bit Score: 402; Significance: 0; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 26 - 472
Target Start/End: Original strand, 32706083 - 32706524
Alignment:
Q  26 ttttggagtcagctttcttgtattcctctgtgtagacgttttatatcaagttgaactctattctaaaatttcgattcttaaaatatctcaccttgttgag 125  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  32706083 ttttagagtcagctttcttttattcctctgtgtagacgttttatatcaagttgaactctattctaaaattacaattcttaaaatatctcaccttgttgag 32706182  T
Q  126 tgttagtgttgatagacatcttattcagattttgtttagctcattgcaagatagtttaagattgtcggtgtttaatgttttacctacatatcaatcattg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32706183 tgttagtgttgatagacatcttattcagattttgtttagctcattgcatgatagtttaagattgtcggtgtttaatgttt-acctacatatcaatcattg 32706281  T
Q  226 agtgagtggtattcttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaatag 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706282 agtgagtggtattcttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaatag 32706381  T
Q  326 aagaagagaagcgtgtttccaacactagttatacaagaagagaagcgtgttcgctttgtgggtggtgagttgcgtgttgtagtgtttattttttatttga 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||    
T  32706382 aagaagagaagcgtgtttccaacactagttatacaagaagagaagcgtgttcgcttt----gtggtgagttgcgtgttgtagtgtttattttttatttga 32706477  T
Q  426 tggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32706478 tggatgtagtcgattccacttagtgggataatgcttggttgttgttg 32706524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32718277 - 32718373
Alignment:
Q  1 agctaggattttagtagccggttggttttggagtcagctttcttgtattcctctgtgtagacgttttatatcaagttgaactctattctaaaatttc 97  Q
    |||||||| || |||||| ||||| |||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32718277 agctaggagttcagtagctggttgtttttggagtctgcttttctgtattcctctgtgtagacgttttacatcaagttgaactctattctaaaatttc 32718373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32724682 - 32724778
Alignment:
Q  1 agctaggattttagtagccggttggttttggagtcagctttcttgtattcctctgtgtagacgttttatatcaagttgaactctattctaaaatttc 97  Q
    |||||||| || |||||| ||||| |||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32724682 agctaggagttcagtagctggttgtttttggagtctgcttttctgtattcctctgtgtagacgttttacatcaagttgaactctattctaaaatttc 32724778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 32718574 - 32718651
Alignment:
Q  242 gtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 319  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32718574 gtgcatgagatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 32724979 - 32725056
Alignment:
Q  242 gtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 319  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32724979 gtgcatgagatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32725056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 32718419 - 32718472
Alignment:
Q  111 tctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttag 164  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  32718419 tctcaccttgtttagtgttagtggtgatagacatcttattcacattttgtttag 32718472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 32724824 - 32724877
Alignment:
Q  111 tctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttag 164  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  32724824 tctcaccttgtttagtgttagtggtgatagacatcttattcacattttgtttag 32724877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 12734929 - 12734981
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||  |||||||||||||||| |||||||||||||||    
T  12734929 atttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttg 12734981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 479
Target Start/End: Complemental strand, 1404214 - 1404155
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgatgatgt 479  Q
    |||||||| |||||| ||| || | ||||||||||||||||||||| |||||| ||||||    
T  1404214 atttgatgaatgtagccgactcaatttagtgggataatgcttggttattgttgttgatgt 1404155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 472
Target Start/End: Original strand, 14530530 - 14530561
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||||    
T  14530530 ccacttagtgggataatgcttggttgttgttg 14530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 472
Target Start/End: Complemental strand, 28960255 - 28960212
Alignment:
Q  429 atgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||||| |||| |||||||||||| |||||||||||||||    
T  28960255 atgtagtcgactccatttagtgggataaggcttggttgttgttg 28960212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 476
Target Start/End: Complemental strand, 45543105 - 45543070
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttgatga 476  Q
    |||||||||||||||||||||| |||||||||||||    
T  45543105 ccacttagtgggataatgcttgcttgttgttgatga 45543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Complemental strand, 3243685 - 3243652
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttgat 474  Q
    |||||||||||||||| |||||||||||||||||    
T  3243685 ccacttagtgggataaggcttggttgttgttgat 3243652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 472
Target Start/End: Complemental strand, 8197571 - 8197542
Alignment:
Q  443 acttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||    
T  8197571 acttagtgggataatgcttggttgttgttg 8197542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 472
Target Start/End: Complemental strand, 8202331 - 8202302
Alignment:
Q  443 acttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||    
T  8202331 acttagtgggataatgcttggttgttgttg 8202302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 478
Target Start/End: Complemental strand, 10403925 - 10403888
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttgatgatg 478  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  10403925 ccacttagtgggataaggcttggttgttgttgttgatg 10403888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 12520115 - 12520058
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgatgat 477  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||| ||||    
T  12520115 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgat 12520058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 35715885 - 35715856
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgt 470  Q
    ||||||||||||||||||||||||||||||    
T  35715885 ccacttagtgggataatgcttggttgttgt 35715856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 227418 - 227470
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  227418 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 227470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 3635376 - 3635324
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  3635376 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 3635324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 4807824 - 4807876
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  4807824 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 4807876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 9531653 - 9531601
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  9531653 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 9531601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 9556422 - 9556370
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| ||| ||||||||||||||| | |||||||||||||||    
T  9556422 atttgatacatgtagccgactccacttagtgggatgaggcttggttgttgttg 9556370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 12474980 - 12474928
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  12474980 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 12474928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 17670697 - 17670749
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  17670697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 17670749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 25834907 - 25834959
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  25834907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 25834959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 28508907 - 28508959
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  28508907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 28508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 30306261 - 30306313
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  30306261 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 30306313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 38328423 - 38328371
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  38328423 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 38328371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 38435181 - 38435233
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||| ||||||||||| |||| |||||||||||||||    
T  38435181 atttgatccatgtagccgatcccacttagtggcataaggcttggttgttgttg 38435233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 41763096 - 41763044
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  41763096 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 41763044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 43573183 - 43573131
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  43573183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 43573131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 6e-38; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 14903523 - 14903439
Alignment:
Q  240 ttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14903523 ttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcactgaata 14903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 14903720 - 14903644
Alignment:
Q  21 gttggttttggagtcagctttcttgtattcctctgtgtagacgttttatatcaagttgaactctattctaaaatttc 97  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||||| ||||||||||||||    
T  14903720 gttggttttggagtcaactttcttgtattcctctatgtagattatttatatcaagttgaactttattctaaaatttc 14903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 579647 - 579699
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||| |||||||||||||||| |||||||||||||||    
T  579647 atttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttg 579699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 476
Target Start/End: Complemental strand, 29196038 - 29196002
Alignment:
Q  440 tccacttagtgggataatgcttggttgttgttgatga 476  Q
    |||||||||| ||||||||||||||||||||||||||    
T  29196038 tccacttagtaggataatgcttggttgttgttgatga 29196002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 5096063 - 5096115
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||| |||||||||||||||| | |||||||||||||    
T  5096063 atttgatctatgtagccgatcccacttagtgggataaggtttggttgttgttg 5096115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 9706999 - 9707051
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  9706999 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 9707051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 12890804 - 12890856
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  12890804 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 12890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 28085605 - 28085657
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  28085605 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 28085657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 31819060 - 31819112
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||| ||||    
T  31819060 atttgatccatgtagccgaccccacttagtgggataatgcttggttgtggttg 31819112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 34143818 - 34143766
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||  ||||||| |||||||| |||||||||||||||    
T  34143818 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttg 34143766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 34156434 - 34156382
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||  ||||||| |||||||| |||||||||||||||    
T  34156434 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttg 34156382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 34934883 - 34934831
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  34934883 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 34934831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 4e-33; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 384 - 472
Target Start/End: Original strand, 3000932 - 3001020
Alignment:
Q  384 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||||||||    
T  3000932 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagccgaccccacttagtgggataaggcttggttgttgttg 3001020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 2999658 - 2999748
Alignment:
Q  240 ttgtgcatgagatcattattt------atttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 324  Q
    |||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2999658 ttgtgcatgagatcattattttattttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 2999748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2999393 - 2999461
Alignment:
Q  1 agctaggattttagtagccggttggttttggagtcagctttcttgtattcctctgtgtagacgttttat 69  Q
    ||||| || |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2999393 agctacgagtttagtagtcagttggttttggagtcagctttcttgtattcctctgtgtagacgttttat 2999461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 7432420 - 7432467
Alignment:
Q  277 tagcttgatgcaatttctagcttcattacatatttaaatcattgaata 324  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7432420 tagcttgatgcaatttgtagcttcattacatattgaaatcattgaata 7432467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 2999481 - 2999553
Alignment:
Q  99 attcttaaaatatctcaccttgttgagtgttagtgttg-------atagacatcttattcagattttgtttag 164  Q
    ||||| ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||    
T  2999481 attctcaaaatatctcaccttgttgagtgttagtggtgaatggtaatagacatcttattcagattttgtttag 2999553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 386
Target Start/End: Original strand, 3000803 - 3000849
Alignment:
Q  340 gtttccaacactagttatacaagaagagaagcgtgttcgctttgtgg 386  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  3000803 gtttccagaactagttatacaagaagagaagcgcgttcgctttgtgg 3000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 12492437 - 12492385
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||| |||||| |||  |||||||||||||||| |||||||||||||||    
T  12492437 atttgatgcatgtagccgaccccacttagtgggataaggcttggttgttgttg 12492385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 408547 - 408495
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  408547 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 408495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 3302073 - 3302125
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  3302073 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 3302125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 4496613 - 4496665
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  4496613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 4496665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 14665941 - 14665993
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  14665941 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttg 14665993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 28976912 - 28976860
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  28976912 atttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttg 28976860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 29816611 - 29816663
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  29816611 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 29816663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 429 - 472
Target Start/End: Complemental strand, 48712119 - 48712076
Alignment:
Q  429 atgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  48712119 atgtagttgatcccacttagtgggataatgcttggttgttgttg 48712076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 25191606 - 25191658
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||  ||| ||||||||||||||||||||||||||||||||    
T  25191606 atttgatccatgtagctgatcccacttagtgggataatgcttggttgttgttg 25191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 418 - 472
Target Start/End: Original strand, 52139027 - 52139081
Alignment:
Q  418 ttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  52139027 ttatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 52139081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 478
Target Start/End: Original strand, 43529296 - 43529333
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttgatgatg 478  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  43529296 ccacttagtgggataaggcttggttgttgttgttgatg 43529333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 22301 - 22353
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  22301 atttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttg 22353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 311362 - 311310
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  311362 atttgatacatgtagccgaccccacttagtgggataaggcttggttgttgttg 311310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 2133665 - 2133613
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||| ||||  |||||||||||||||| |||||||||||||||    
T  2133665 atttgatccatgtactcgaccccacttagtgggataaggcttggttgttgttg 2133613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 5169061 - 5169113
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  5169061 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 5169113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 12096758 - 12096706
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  12096758 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 12096706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 477
Target Start/End: Complemental strand, 23610964 - 23610928
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttgatgat 477  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  23610964 ccacttagtgggataaggcttggttgttgttgttgat 23610928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 31146928 - 31146980
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| ||| ||||||||||||||||| ||| |||||||||||    
T  31146928 atttgatccatgtagccgactccacttagtgggataaggctcggttgttgttg 31146980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 31566214 - 31566162
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  31566214 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 31566162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 40106673 - 40106621
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||| ||  |||||||||||||||| |||||||||||||||    
T  40106673 atttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgttg 40106621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 48508464 - 48508516
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  48508464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 48508516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 53262370 - 53262422
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  53262370 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttg 53262422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 54128608 - 54128660
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  54128608 atttgatccatgtaggcgaccccacttagtgggataaggcttggttgttgttg 54128660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 16807 - 16859
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||||    
T  16807 atttgatctatgtagccgactccacttagtgggataaggcttggttgttgttg 16859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 39851723 - 39851767
Alignment:
Q  278 agcttgatgcaatttctagcttcattacatatttaaatcattgaa 322  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  39851723 agcttgatgtaatttttagcttcattacatagttaaatcattgaa 39851767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 472
Target Start/End: Complemental strand, 35643640 - 35643609
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||||    
T  35643640 ccacttagtgggataatgcttggttgttgttg 35643609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 1313814 - 1313843
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgt 470  Q
    ||||||||||||||||||||||||||||||    
T  1313814 ccacttagtgggataatgcttggttgttgt 1313843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 1928640 - 1928588
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  1928640 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 1928588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 10668550 - 10668498
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||| ||||||| |||   ||||||||||||||| |||||||||||||||    
T  10668550 atttgatcgatgtagccgacctcacttagtgggataaggcttggttgttgttg 10668498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 11523776 - 11523724
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  11523776 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 11523724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 14742135 - 14742083
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  14742135 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 14742083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 25473456 - 25473404
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  25473456 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 25473404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 469
Target Start/End: Original strand, 26055659 - 26055699
Alignment:
Q  429 atgtagtcgattccacttagtgggataatgcttggttgttg 469  Q
    |||||| |||| |||||||||||||||| ||||||||||||    
T  26055659 atgtagccgatcccacttagtgggataaggcttggttgttg 26055699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 32276914 - 32276966
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  32276914 atttgatccatgtagacgaacccacttagtgggataaagcttggttgttgttg 32276966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 36545378 - 36545430
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  36545378 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 36545430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 44529454 - 44529506
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  44529454 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 44529506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 45419464 - 45419516
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  45419464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 45419516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 6957827 - 6957879
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||| |||||||||||||||| |||||||||||||||    
T  6957827 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttgttg 6957879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 43434153 - 43434205
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||  |||||||||||||||| |||||||||||||||    
T  43434153 atttgatccatgtagtcgagcccacttagtgggataaggcttggttgttgttg 43434205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 472
Target Start/End: Original strand, 32339797 - 32339840
Alignment:
Q  429 atgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||| |||| |||||||||||||| |||||||||||||||    
T  32339797 atgtagtctattctacttagtgggataaggcttggttgttgttg 32339840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 443 - 473
Target Start/End: Original strand, 4548274 - 4548304
Alignment:
Q  443 acttagtgggataatgcttggttgttgttga 473  Q
    |||||||||||||||||||||||||||||||    
T  4548274 acttagtgggataatgcttggttgttgttga 4548304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 436458 - 436510
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  436458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 436510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 21528517 - 21528569
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  21528517 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 21528569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 30634159 - 30634107
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  30634159 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 30634107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 31959867 - 31959815
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  31959867 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 31959815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 44476235 - 44476279
Alignment:
Q  278 agcttgatgcaatttctagcttcattacatatttaaatcattgaa 322  Q
    |||| |||||||||| ||||| ||||||||| |||||||||||||    
T  44476235 agctggatgcaatttgtagctgcattacatagttaaatcattgaa 44476279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 50238668 - 50238616
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  50238668 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 50238616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 50238754 - 50238702
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  50238754 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 50238702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 52569568 - 52569516
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  52569568 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 52569516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 55007975 - 55008027
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  55007975 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 55008027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 3777313 - 3777261
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||| ||||||||| ||||||||||||||||||||||    
T  3777313 atttgatccatgtagccgatcccacttagtaggataatgcttggttgttgttg 3777261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 6025834 - 6025882
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgtt 468  Q
    |||||||  |||||| |||||||||||||||||||||| ||||||||||    
T  6025834 atttgatccatgtagccgattccacttagtgggataatacttggttgtt 6025882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 472
Target Start/End: Original strand, 22930643 - 22930674
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||||    
T  22930643 ccacttagtgggataatgcttggttgttgttg 22930674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 472
Target Start/End: Complemental strand, 31274433 - 31274402
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||||    
T  31274433 ccacttagtgggataatgcttggttgttgttg 31274402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 472
Target Start/End: Original strand, 43898459 - 43898490
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||||||||||||||||||||||||||||    
T  43898459 ccacttagtgggataatgcttggttgttgttg 43898490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 470
Target Start/End: Original strand, 39140744 - 39140794
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 470  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||||||    
T  39140744 atttgattcatgtagccgaccccacttagtgggataatgcttggttgttgt 39140794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 696499 - 696551
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  696499 atttgatcaatgtagccgaccccacttagtgggataaggcttggttgttgttg 696551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 1210974 - 1211026
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  1210974 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 1211026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 25979284 - 25979232
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  25979284 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 25979232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 29577481 - 29577533
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  29577481 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 29577533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 30202183 - 30202131
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  30202183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 30202131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 32079230 - 32079178
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    ||||||| ||||||| |||  |||||| ||||||||| |||||||||||||||    
T  32079230 atttgatcgatgtagccgaccccacttggtgggataaggcttggttgttgttg 32079178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 34444585 - 34444637
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  34444585 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttg 34444637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 472
Target Start/End: Complemental strand, 36339837 - 36339805
Alignment:
Q  440 tccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||||||||| ||||||||||||||||||    
T  36339837 tccacttagtgggaaaatgcttggttgttgttg 36339805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 41560458 - 41560510
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  41560458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 41560510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 43481851 - 43481799
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 43481799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 44941829 - 44941777
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  44941829 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 44941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 49347446 - 49347394
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  49347446 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 49347394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 50636310 - 50636362
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||||| |||||| ||||||| ||||| |||||||||    
T  50636310 atttgatcaatgtagtcgattctacttagcgggataaggcttgattgttgttg 50636362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 50846791 - 50846843
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  ||||||||||||| ||||||||||||||||||    
T  50846791 atttgatctatgtagccgacaccacttagtgggaaaatgcttggttgttgttg 50846843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 52561642 - 52561590
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  52561642 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 52561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 52921309 - 52921361
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  52921309 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 52921361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 472
Target Start/End: Original strand, 12966254 - 12966297
Alignment:
Q  429 atgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||| |||| |||||||||||||||| |||||||||||||||    
T  12966254 atgtagccgatcccacttagtgggataaggcttggttgttgttg 12966297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 470
Target Start/End: Complemental strand, 40149066 - 40149016
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 470  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||    
T  40149066 atttgatctatgtagccgaatccacttagtgggataaggcttggttgttgt 40149016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 1011275 - 1011327
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  1011275 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttg 1011327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 2885775 - 2885723
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  2885775 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 2885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 5418303 - 5418355
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||  ||| |||||||||||| |||||||||||||||    
T  5418303 atttgatccatgtagtcgaccccatttagtgggataaggcttggttgttgttg 5418355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 11594189 - 11594241
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  11594189 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 11594241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 12841328 - 12841276
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  12841328 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 12841276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 22349849 - 22349901
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||  |||||||||||||||| ||||| |||||||||    
T  22349849 atttgatccatgtagtcgaccccacttagtgggataaggcttgattgttgttg 22349901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 27649009 - 27649061
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  27649009 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 27649061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 28208381 - 28208329
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  28208381 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 28208329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 29650613 - 29650665
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  29650613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 29650665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 31005434 - 31005486
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  31005434 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 31005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 31682655 - 31682603
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  31682655 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 31682603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 31869155 - 31869103
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  31869155 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 31869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 32631793 - 32631845
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  32631793 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttg 32631845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 33073158 - 33073206
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgtt 468  Q
    |||||||  |||||| |||| |||||||||||||||| |||||||||||    
T  33073158 atttgatccatgtagccgatcccacttagtgggataaggcttggttgtt 33073206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 33732061 - 33732113
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| || | |||||||||||||||| |||||||||||||||    
T  33732061 atttgatccatgtagccggtcccacttagtgggataaggcttggttgttgttg 33732113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 34745997 - 34746029
Alignment:
Q  441 ccacttagtgggataatgcttggttgttgttga 473  Q
    |||||||||||||||| ||||||||||||||||    
T  34745997 ccacttagtgggataaggcttggttgttgttga 34746029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 36101830 - 36101778
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||| ||  |||||||||||||||| |||||||||||||||    
T  36101830 atttgatccatgtagttgaccccacttagtgggataaggcttggttgttgttg 36101778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 37618174 - 37618226
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  37618174 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 37618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 39906425 - 39906373
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  39906425 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 39906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 40979981 - 40979929
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  40979981 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 40979929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 48919341 - 48919393
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  ||||||||||  ||||||| |||||||| |||||||||||||||    
T  48919341 atttgatccatgtagtcgaccccacttaatgggataaggcttggttgttgttg 48919393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 28942 - 28890
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  28942 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 28890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 31697 - 31749
Alignment:
Q  420 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttg 472  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||    
T  31697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 31749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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