View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16912_low_2 (Length: 705)

Name: NF16912_low_2
Description: NF16912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16912_low_2
NF16912_low_2
[»] chr5 (45 HSPs)
chr5 (17-697)||(38596326-38597007)
chr5 (17-481)||(38552029-38552487)
chr5 (26-527)||(38060885-38061390)
chr5 (558-695)||(43318047-43318184)
chr5 (556-695)||(32087512-32087651)
chr5 (558-695)||(18728589-18728726)
chr5 (558-694)||(35292370-35292505)
chr5 (557-673)||(38178102-38178218)
chr5 (557-673)||(38205326-38205442)
chr5 (558-695)||(35395333-35395470)
chr5 (576-692)||(24496761-24496877)
chr5 (558-677)||(33256400-33256519)
chr5 (568-682)||(17574328-17574442)
chr5 (625-697)||(38597012-38597084)
chr5 (568-682)||(36057613-36057727)
chr5 (568-682)||(7267853-7267967)
chr5 (568-682)||(30468280-30468394)
chr5 (556-649)||(32089925-32090018)
chr5 (558-649)||(33257760-33257851)
chr5 (554-649)||(40330515-40330610)
chr5 (568-682)||(2179797-2179911)
chr5 (566-647)||(32835884-32835965)
chr5 (600-693)||(34327677-34327770)
chr5 (568-664)||(24541230-24541326)
chr5 (568-647)||(21842992-21843071)
chr5 (568-647)||(30463910-30463989)
chr5 (566-649)||(42619297-42619380)
chr5 (568-665)||(8539685-8539782)
chr5 (556-649)||(18726563-18726656)
chr5 (573-649)||(38176647-38176723)
chr5 (573-649)||(38203871-38203947)
chr5 (566-649)||(1344814-1344897)
chr5 (568-647)||(2852896-2852975)
chr5 (607-682)||(29621781-29621856)
chr5 (568-682)||(2854327-2854440)
chr5 (568-682)||(18625008-18625122)
chr5 (573-651)||(24498065-24498143)
chr5 (607-664)||(42473625-42473682)
chr5 (568-647)||(12738736-12738815)
chr5 (568-647)||(12801559-12801638)
chr5 (569-664)||(27075831-27075926)
chr5 (607-682)||(40780599-40780674)
chr5 (555-649)||(35291045-35291139)
chr5 (489-527)||(38551975-38552013)
chr5 (607-647)||(7269446-7269486)
[»] chr7 (57 HSPs)
chr7 (557-693)||(33038786-33038922)
chr7 (558-695)||(23953805-23953942)
chr7 (557-694)||(46996690-46996827)
chr7 (555-695)||(47341673-47341813)
chr7 (558-677)||(2167479-2167598)
chr7 (566-695)||(38614899-38615027)
chr7 (558-671)||(38613492-38613605)
chr7 (558-695)||(46812569-46812706)
chr7 (553-677)||(8423286-8423410)
chr7 (558-684)||(40784346-40784472)
chr7 (566-677)||(27955378-27955489)
chr7 (600-677)||(35344295-35344372)
chr7 (564-667)||(2492333-2492436)
chr7 (566-649)||(45465184-45465267)
chr7 (568-664)||(29996532-29996628)
chr7 (566-649)||(38614792-38614875)
chr7 (566-649)||(46810713-46810796)
chr7 (568-682)||(39859229-39859343)
chr7 (566-649)||(30108573-30108656)
chr7 (566-649)||(35342433-35342516)
chr7 (566-649)||(36756883-36756966)
chr7 (566-649)||(36762680-36762763)
chr7 (566-649)||(36766407-36766490)
chr7 (608-682)||(6602385-6602459)
chr7 (568-682)||(27666065-27666179)
chr7 (568-663)||(56340-56435)
chr7 (553-649)||(4321033-4321129)
chr7 (614-682)||(34776915-34776983)
chr7 (568-647)||(13169683-13169762)
chr7 (568-647)||(33775418-33775497)
chr7 (556-663)||(45463668-45463775)
chr7 (555-649)||(23955285-23955379)
chr7 (600-682)||(24228409-24228491)
chr7 (568-682)||(38474143-38474257)
chr7 (600-649)||(8421458-8421507)
chr7 (607-663)||(11682830-11682886)
chr7 (566-649)||(33037701-33037785)
chr7 (633-693)||(35693359-35693419)
chr7 (557-649)||(46994659-46994751)
chr7 (566-649)||(3690158-3690241)
chr7 (568-647)||(35403619-35403698)
chr7 (568-647)||(39857655-39857734)
chr7 (568-682)||(37115526-37115640)
chr7 (599-664)||(366739-366804)
chr7 (621-682)||(20478105-20478166)
chr7 (614-675)||(45359392-45359453)
chr7 (568-647)||(6605397-6605476)
chr7 (568-647)||(13039642-13039721)
chr7 (614-677)||(19712268-19712331)
chr7 (568-647)||(27664440-27664519)
chr7 (564-663)||(34691001-34691100)
chr7 (568-647)||(35401979-35402058)
chr7 (614-677)||(37796186-37796249)
chr7 (566-649)||(40785548-40785631)
chr7 (552-649)||(2168834-2168931)
chr7 (568-641)||(46439539-46439612)
chr7 (614-682)||(1546343-1546411)
[»] chr3 (67 HSPs)
chr3 (556-695)||(48633875-48634014)
chr3 (555-693)||(40508900-40509038)
chr3 (558-695)||(31887439-31887576)
chr3 (556-677)||(33113185-33113306)
chr3 (556-674)||(23774150-23774268)
chr3 (552-695)||(18430258-18430401)
chr3 (556-677)||(45898353-45898474)
chr3 (557-677)||(24382898-24383018)
chr3 (558-683)||(23888771-23888896)
chr3 (558-677)||(41021008-41021127)
chr3 (555-676)||(2977335-2977456)
chr3 (558-677)||(45257225-45257344)
chr3 (570-695)||(33852657-33852782)
chr3 (552-677)||(39641844-39641969)
chr3 (558-695)||(51454237-51454374)
chr3 (568-682)||(53190779-53190893)
chr3 (568-693)||(30599927-30600052)
chr3 (568-682)||(54898447-54898561)
chr3 (568-693)||(21348733-21348858)
chr3 (568-692)||(2660222-2660346)
chr3 (566-649)||(23887206-23887289)
chr3 (571-682)||(35905732-35905843)
chr3 (566-649)||(45897058-45897141)
chr3 (566-649)||(48635373-48635456)
chr3 (568-682)||(2226172-2226286)
chr3 (568-682)||(27899101-27899215)
chr3 (555-649)||(33111838-33111932)
chr3 (568-682)||(41977760-41977874)
chr3 (613-677)||(1845839-1845903)
chr3 (556-649)||(1847645-1847738)
chr3 (569-649)||(2975471-2975551)
chr3 (568-647)||(3150262-3150341)
chr3 (572-631)||(24381758-24381817)
chr3 (568-675)||(43765147-43765254)
chr3 (608-682)||(3152238-3152312)
chr3 (568-682)||(51684620-51684734)
chr3 (566-631)||(18428757-18428822)
chr3 (571-648)||(31885531-31885608)
chr3 (598-649)||(37865424-37865475)
chr3 (568-647)||(38193510-38193589)
chr3 (566-649)||(40508501-40508584)
chr3 (568-647)||(41979352-41979431)
chr3 (614-693)||(42279563-42279642)
chr3 (568-647)||(46308817-46308896)
chr3 (568-647)||(46310436-46310515)
chr3 (568-647)||(53094273-53094352)
chr3 (568-647)||(53187752-53187831)
chr3 (568-674)||(17515320-17515426)
chr3 (607-693)||(19987603-19987689)
chr3 (608-682)||(44794257-44794331)
chr3 (568-682)||(46112497-46112611)
chr3 (636-693)||(7884882-7884939)
chr3 (568-647)||(2661908-2661987)
chr3 (568-627)||(30598347-30598406)
chr3 (566-649)||(33850990-33851073)
chr3 (558-649)||(40998515-40998606)
chr3 (564-647)||(41944582-41944665)
chr3 (566-649)||(45255491-45255574)
chr3 (568-647)||(46611303-46611382)
chr3 (568-647)||(54900074-54900153)
chr3 (599-693)||(46197761-46197855)
chr3 (570-647)||(23291582-23291659)
chr3 (614-682)||(23293190-23293258)
chr3 (607-647)||(38191944-38191984)
chr3 (593-649)||(41946099-41946155)
chr3 (633-693)||(44276205-44276265)
chr3 (621-693)||(48830815-48830887)
[»] chr8 (60 HSPs)
chr8 (555-695)||(42897761-42897901)
chr8 (557-694)||(32822360-32822497)
chr8 (558-695)||(462357-462494)
chr8 (557-677)||(37526028-37526148)
chr8 (557-695)||(31821417-31821555)
chr8 (557-695)||(38882784-38882922)
chr8 (564-675)||(33160155-33160266)
chr8 (607-694)||(33750372-33750459)
chr8 (553-677)||(31201148-31201272)
chr8 (558-687)||(1320617-1320746)
chr8 (557-684)||(9184382-9184509)
chr8 (568-682)||(8609807-8609921)
chr8 (568-682)||(13108356-13108470)
chr8 (568-682)||(13282488-13282602)
chr8 (566-663)||(25707287-25707384)
chr8 (568-682)||(27691164-27691278)
chr8 (558-695)||(8654500-8654636)
chr8 (566-663)||(25373608-25373705)
chr8 (568-693)||(41825653-41825778)
chr8 (553-649)||(31823476-31823572)
chr8 (557-649)||(40019155-40019247)
chr8 (568-675)||(38547238-38547345)
chr8 (600-682)||(26242334-26242416)
chr8 (600-682)||(41042604-41042686)
chr8 (564-661)||(28433737-28433834)
chr8 (599-682)||(15305838-15305921)
chr8 (599-682)||(15486207-15486290)
chr8 (566-649)||(33368767-33368850)
chr8 (566-649)||(42894784-42894867)
chr8 (568-674)||(13486127-13486233)
chr8 (601-677)||(9673190-9673266)
chr8 (566-649)||(461184-461267)
chr8 (568-683)||(5036455-5036570)
chr8 (568-647)||(29237161-29237240)
chr8 (568-647)||(33707216-33707295)
chr8 (568-647)||(35509224-35509303)
chr8 (568-647)||(42943426-42943505)
chr8 (569-647)||(13283995-13284073)
chr8 (568-682)||(42941784-42941898)
chr8 (600-649)||(32824271-32824320)
chr8 (599-675)||(22272377-22272453)
chr8 (573-649)||(37524873-37524949)
chr8 (568-647)||(601704-601783)
chr8 (598-649)||(1322314-1322365)
chr8 (568-647)||(27692837-27692916)
chr8 (568-647)||(29239187-29239266)
chr8 (607-682)||(33708824-33708899)
chr8 (566-649)||(33748340-33748423)
chr8 (568-647)||(33762713-33762792)
chr8 (568-647)||(35510819-35510898)
chr8 (568-647)||(38548831-38548910)
chr8 (570-647)||(8608249-8608327)
chr8 (607-649)||(24526945-24526987)
chr8 (570-647)||(9671989-9672066)
chr8 (600-649)||(31199527-31199576)
chr8 (566-631)||(38881436-38881501)
chr8 (558-663)||(40020654-40020759)
chr8 (607-647)||(15308261-15308301)
chr8 (607-647)||(15488630-15488670)
chr8 (607-647)||(33761118-33761158)
[»] chr1 (52 HSPs)
chr1 (553-695)||(42134477-42134619)
chr1 (558-673)||(18183952-18184067)
chr1 (557-695)||(36895497-36895635)
chr1 (558-694)||(35479963-35480099)
chr1 (556-695)||(46638794-46638933)
chr1 (553-677)||(47269461-47269585)
chr1 (574-695)||(45380971-45381092)
chr1 (607-695)||(31801682-31801770)
chr1 (558-677)||(27940608-27940727)
chr1 (558-677)||(44157433-44157552)
chr1 (568-682)||(4855966-4856080)
chr1 (568-682)||(46583556-46583670)
chr1 (568-693)||(2869589-2869714)
chr1 (558-665)||(33685265-33685372)
chr1 (568-682)||(34778138-34778252)
chr1 (568-671)||(31238506-31238609)
chr1 (568-682)||(25278368-25278482)
chr1 (568-682)||(27087293-27087407)
chr1 (599-693)||(51896141-51896235)
chr1 (566-649)||(5784867-5784950)
chr1 (568-682)||(33602644-33602758)
chr1 (568-682)||(37344352-37344466)
chr1 (568-647)||(26223597-26223676)
chr1 (568-647)||(31236829-31236908)
chr1 (566-649)||(42136244-42136327)
chr1 (627-677)||(6575261-6575311)
chr1 (568-682)||(6818678-6818792)
chr1 (600-682)||(15104483-15104565)
chr1 (568-682)||(50556097-50556211)
chr1 (600-649)||(27952500-27952549)
chr1 (568-660)||(3013498-3013590)
chr1 (557-649)||(11152544-11152636)
chr1 (557-649)||(31803700-31803792)
chr1 (568-647)||(4854420-4854499)
chr1 (607-682)||(9121668-9121743)
chr1 (566-649)||(33679267-33679350)
chr1 (568-647)||(37345962-37346041)
chr1 (614-693)||(51121961-51122040)
chr1 (558-663)||(5783364-5783469)
chr1 (566-647)||(6577107-6577188)
chr1 (566-647)||(35478095-35478176)
chr1 (568-660)||(25278975-25279067)
chr1 (568-647)||(34776579-34776658)
chr1 (566-649)||(44159294-44159377)
chr1 (566-649)||(45379093-45379176)
chr1 (568-647)||(46582020-46582099)
chr1 (607-682)||(47013082-47013157)
chr1 (569-647)||(33599229-33599307)
chr1 (568-645)||(8167952-8168029)
chr1 (608-649)||(18180550-18180591)
chr1 (566-647)||(51894575-51894656)
chr1 (557-649)||(47264123-47264215)
[»] chr2 (47 HSPs)
chr2 (558-695)||(37417273-37417410)
chr2 (559-675)||(25619661-25619777)
chr2 (558-695)||(29909647-29909784)
chr2 (558-669)||(15432328-15432439)
chr2 (564-693)||(42879362-42879490)
chr2 (604-695)||(39384-39475)
chr2 (568-682)||(16763086-16763200)
chr2 (557-677)||(15372498-15372618)
chr2 (558-677)||(41706539-41706658)
chr2 (564-677)||(39562-39675)
chr2 (558-695)||(92334-92470)
chr2 (557-669)||(42001609-42001720)
chr2 (566-689)||(11315328-11315451)
chr2 (600-693)||(40560265-40560358)
chr2 (568-674)||(2766944-2767050)
chr2 (568-682)||(39664768-39664882)
chr2 (566-663)||(361453-361550)
chr2 (557-649)||(28248175-28248267)
chr2 (557-647)||(41144-41234)
chr2 (568-682)||(14389104-14389218)
chr2 (568-682)||(44709765-44709879)
chr2 (593-682)||(16377217-16377306)
chr2 (568-675)||(42519232-42519340)
chr2 (566-649)||(11021541-11021624)
chr2 (568-682)||(19908266-19908381)
chr2 (607-682)||(24208062-24208137)
chr2 (566-649)||(42880811-42880894)
chr2 (566-651)||(20941989-20942074)
chr2 (600-649)||(41708430-41708479)
chr2 (573-649)||(42003490-42003566)
chr2 (607-682)||(6786001-6786076)
chr2 (568-647)||(16764611-16764690)
chr2 (576-682)||(37020526-37020632)
chr2 (558-663)||(28246663-28246768)
chr2 (570-647)||(39663166-39663243)
chr2 (564-663)||(38148501-38148601)
chr2 (566-649)||(33201-33284)
chr2 (601-692)||(6797550-6797641)
chr2 (564-663)||(11023032-11023130)
chr2 (568-647)||(14387359-14387438)
chr2 (546-649)||(15373888-15373991)
chr2 (568-682)||(17696216-17696330)
chr2 (570-640)||(19906694-19906764)
chr2 (614-675)||(7744099-7744160)
chr2 (614-682)||(17946150-17946218)
chr2 (568-664)||(19581424-19581520)
chr2 (614-682)||(39455225-39455293)
[»] chr4 (51 HSPs)
chr4 (557-695)||(44558480-44558618)
chr4 (557-677)||(10372711-10372831)
chr4 (558-677)||(47941811-47941930)
chr4 (557-677)||(10762580-10762700)
chr4 (556-675)||(51041938-51042056)
chr4 (558-695)||(2350494-2350631)
chr4 (558-695)||(35996063-35996200)
chr4 (568-695)||(27624816-27624943)
chr4 (558-677)||(44794765-44794884)
chr4 (607-677)||(2827453-2827523)
chr4 (556-695)||(4519374-4519513)
chr4 (568-682)||(41761746-41761860)
chr4 (566-649)||(2828411-2828494)
chr4 (566-649)||(43778397-43778480)
chr4 (568-693)||(51011936-51012061)
chr4 (557-649)||(39085152-39085244)
chr4 (553-649)||(39923007-39923103)
chr4 (566-649)||(4520451-4520534)
chr4 (568-682)||(41781549-41781663)
chr4 (568-682)||(43519434-43519548)
chr4 (567-649)||(44556629-44556711)
chr4 (556-649)||(44992806-44992899)
chr4 (600-692)||(13450970-13451062)
chr4 (557-649)||(42879274-42879366)
chr4 (557-663)||(39083638-39083744)
chr4 (568-682)||(49523134-49523248)
chr4 (558-663)||(5484540-5484645)
chr4 (600-693)||(42980677-42980770)
chr4 (600-649)||(44792976-44793025)
chr4 (577-648)||(230455-230526)
chr4 (568-647)||(319283-319362)
chr4 (568-647)||(4169696-4169775)
chr4 (568-647)||(4173740-4173819)
chr4 (568-647)||(43507177-43507256)
chr4 (568-647)||(43508653-43508732)
chr4 (551-649)||(5486052-5486150)
chr4 (557-663)||(39921493-39921599)
chr4 (599-649)||(47942746-47942796)
chr4 (601-649)||(10371100-10371148)
chr4 (559-663)||(39189383-39189487)
chr4 (576-647)||(835042-835113)
chr4 (568-647)||(33264392-33264471)
chr4 (598-649)||(39190819-39190870)
chr4 (568-647)||(39345574-39345653)
chr4 (568-647)||(49524733-49524812)
chr4 (568-647)||(51013886-51013965)
chr4 (600-649)||(27626728-27626777)
chr4 (601-682)||(35404445-35404526)
chr4 (558-663)||(42880774-42880879)
chr4 (558-663)||(43779886-43779991)
chr4 (601-649)||(15450416-15450464)
[»] chr6 (30 HSPs)
chr6 (607-675)||(3018439-3018507)
chr6 (558-677)||(29077328-29077447)
chr6 (558-677)||(4641355-4641474)
chr6 (558-677)||(29112300-29112419)
chr6 (600-677)||(2968181-2968258)
chr6 (566-693)||(20523374-20523501)
chr6 (568-693)||(32439080-32439205)
chr6 (570-682)||(13613582-13613694)
chr6 (558-649)||(17950561-17950652)
chr6 (568-682)||(7372958-7373072)
chr6 (570-639)||(13610702-13610771)
chr6 (558-649)||(4646216-4646307)
chr6 (566-693)||(30891132-30891259)
chr6 (558-663)||(35175882-35175987)
chr6 (566-682)||(10568407-10568523)
chr6 (607-682)||(3456797-3456872)
chr6 (614-693)||(9398716-9398795)
chr6 (557-663)||(17952061-17952167)
chr6 (566-684)||(24662488-24662606)
chr6 (576-682)||(32455891-32455997)
chr6 (566-647)||(11357194-11357275)
chr6 (552-649)||(29114776-29114873)
chr6 (573-649)||(31210440-31210516)
chr6 (566-649)||(30639619-30639702)
chr6 (568-682)||(6899495-6899609)
chr6 (636-682)||(7049835-7049881)
chr6 (568-682)||(11355232-11355346)
chr6 (568-682)||(32516887-32517001)
chr6 (637-682)||(14338475-14338520)
chr6 (553-649)||(35174386-35174482)
[»] scaffold0477 (1 HSPs)
scaffold0477 (558-677)||(6639-6758)
[»] scaffold1041 (1 HSPs)
scaffold1041 (581-663)||(2121-2203)
[»] scaffold0058 (3 HSPs)
scaffold0058 (568-682)||(3304-3418)
scaffold0058 (568-682)||(4476-4590)
scaffold0058 (568-647)||(14343-14422)
[»] scaffold1454 (1 HSPs)
scaffold1454 (622-682)||(1327-1387)
[»] scaffold0345 (1 HSPs)
scaffold0345 (566-647)||(1555-1636)


Alignment Details
Target: chr5 (Bit Score: 480; Significance: 0; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 17 - 697
Target Start/End: Original strand, 38596326 - 38597007
Alignment:
Q  17 aacgataggttttatagttatgtttcagtcatacaaacactcatttggagcttcgtatttcgacccaatactatatagtcttcacctataacaacaatat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38596326 aacgataggttttatagttatgtttcagtcatacaaacactcatttggagcttcgtatttcgacccaatactatatagtcttcacctataacaacaatat 38596425  T
Q  117 ttgtttgtgatggaagaattatggcttgaactgcaatatatttgggtcatcatagtgtgatataatcacaaataataacgacaacgagtttataaatgtc 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38596426 ttgtttgtgatggaagaattatggcttgaactgcaacatatttgggtcatcatagtgtgatataatcacaaataataacgacaacgagtttataaatgtc 38596525  T
Q  217 ccacatagaccagaacagaaaatatatgagcctttataaagttagattaagcatgaataaacgccgagctattaacgccagcttcttactcaagtgaggg 316  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  38596526 ccacatagaccagaacataaaatatatgggtctttataaagttagattaagcatgaatcaatgccgagctattaacgccagcttgttactcaagtgaggg 38596625  T
Q  317 cataaaattgttggaacacggcttaaggtaaggtaagctgctatgggttatgtctatcgcatctgcaatagggtgggttaagactcttatgacgccttta 416  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||| |||||    
T  38596626 cataaaattgttggaacacggcttaaggta----aagctgctatgggttatgtctattgcatctgcaatagggt-ggtttagactcttatgacgtcttta 38596720  T
Q  417 atctaagagagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaannnnnnnaggagcaacaggtttgtcaataaattat 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||| |    
T  38596721 atctaagagagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaatttttttaggagcaaaaggtttgtcaataaatttt 38596820  T
Q  517 tttcttaca-------aannnnnnnngggattaccaatatatatttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtc 609  Q
    |||||||||       ||         |||||||||||||||| || |||||| |||||||||||||||||||||||||||||| |||  |||||| |||    
T  38596821 tttcttacaaatttttaaatttttttaggattaccaatatata-ttctgagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtc 38596919  T
Q  610 cctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagccgt 697  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || || ||| ||||| |||||||||    
T  38596920 cctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaaggtctttctgtccaagtgttccgttagccgt 38597007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 17 - 481
Target Start/End: Complemental strand, 38552487 - 38552029
Alignment:
Q  17 aacgataggttttatagttatgtttcagtcatacaaacactcatttggagcttcgtatttcgacccaatactatatagtcttcacctataacaacaatat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38552487 aacgataggttttatagttatgtttcagtcatacaaacactcatttggagcttcgtatttcgacccaatactatatagtcttcatctataacaacaatat 38552388  T
Q  117 ttgtttgtgatggaagaattatggcttgaactgcaatatatttgggtcatcatagtgtgatataatcacaaataataacgacaacgagtttataaatgtc 216  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38552387 ttgtttgtgattgaagaattatggcttgaactgcaacatatttaggtcatcatagtgtgatataatcacaaataataacgacaacgagtttataaatgtc 38552288  T
Q  217 ccacatagaccagaacagaaaatatatgagcctttataaagttagattaagcatgaataaacgccgagctattaacgccagcttcttactcaagtgaggg 316  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||    
T  38552287 ccacatagaccagaacataaaatatatgggcctttataaagttagattaagcataaatcaacgccgagctattaacgccagcttgtcactcaagtgaggg 38552188  T
Q  317 cataaaattgttggaacacggcttaaggtaaggtaagctgctatgggttatgtctatcgcatctgcaatagggtgggttaagactcttatgacgccttta 416  Q
    ||||||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||    
T  38552187 cataaaattgttggaacacggcttaagg-----taagctgctatgggttatgtctatcacatctgcaatagggt-ggttaagactcttatgacgcctata 38552094  T
Q  417 atctaagagagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaa 481  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  38552093 atctaagagagctttggcacttgtaagtggataataaggatagaaaactacccttgaaccatcaa 38552029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 26 - 527
Target Start/End: Original strand, 38060885 - 38061390
Alignment:
Q  26 ttttatagttatgtttcagtcatacaaacactcatttggagcttcgtatttcgacccaatactatatagtcttcacctataacaacaatatttgtttgtg 125  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38060885 ttttatagttgtgttttagccatacaaacactcatttggagcttcgtatttcgacccaatactatatagtcttcacctataacaacaatatttgtttgtg 38060984  T
Q  126 atggaagaattatggcttgaactgcaatatatttgggtcatcatagtgtgatataatcacaaataataacgacaacgagtttataaatgtcccacataga 225  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38060985 atggaagaattatggcttcaactgcaacatatttgggtcatcatagtgtgatataatcacaaataataacgacaacgagtttataaatgtcccacataga 38061084  T
Q  226 ccagaacagaaaatatatgagcctttataaagttagattaagcatgaataaacgccgagctattaacgccagcttcttactcaagtgagggcataaaatt 325  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  38061085 ccagaacataaaatatatgggcctttataaagtaagattaagcatgaatcgacgccgagctattaacgacagcttgttactcaagtgagggcataaaatt 38061184  T
Q  326 gttggaacacggcttaaggtaaggtaagctgctatgggttatgtctatcgcatctgcaatagggtgggttaagactcttatgacgcctttaatctaag-- 423  Q
    |||||||||||||||||||||||     ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||      
T  38061185 gttggaacacggcttaaggtaag-----ctgctatgggttatgtctatcacatctgcaatagggtgg-ttaagactcttatgacgcctttaatctaagcc 38061278  T
Q  424 agagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaannnnnnn--------aggagcaacaggtttgtcaataaatta 515  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||               |||||||| ||||||||||||||||||    
T  38061279 agagtttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaattttttattttttttaggagcaaaaggtttgtcaataaatta 38061378  T
Q  516 ttttcttacaaa 527  Q
    ||||||||||||    
T  38061379 ttttcttacaaa 38061390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 43318184 - 43318047
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||||||||||||||||| |||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 43318085  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||| |||||||||||||||| ||| || ||||||||||    
T  43318084 cataaaaaaggtccctccgtccaagtgctctgttagcc 43318047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 556 - 695
Target Start/End: Original strand, 32087512 - 32087651
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| |||||||||||||||| |||||||| | |  |||||||| || |||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  32087512 ttgagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacg 32087611  T
Q  656 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||||||||||| ||| || ||||||||||    
T  32087612 tccatcaaaaaggtccctccgtccaagtgctctgttagcc 32087651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 18728726 - 18728589
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||| |||||||| |    |||  ||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18728627  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||||||||| ||| || ||||||||||    
T  18728626 catcaaaaaggtccctccgtccaagtgctctgttagcc 18728589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 558 - 694
Target Start/End: Complemental strand, 35292505 - 35292370
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||||||||||||||||| | |  |||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35292505 gagtgaaccatcaaattcgtccttgaatttttatgggtggc-caaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 35292407  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagc 694  Q
    ||| |||||||| ||||||| |||||| || ||||||    
T  35292406 cataaaaaaggttcctccgtccaaatgctccgttagc 35292370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 38178218 - 38178102
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| || ||||||||||||||| |||||| | || ||| |||||||  |||||||||||||||||||||||| |||||  |||||||||||||||||    
T  38178218 tgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgt 38178119  T
Q  657 ccatcaaaaaggtccct 673  Q
    |||||||||||||||||    
T  38178118 ccatcaaaaaggtccct 38178102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 38205442 - 38205326
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| || ||||||||||||||| |||||| | || ||| |||||||  |||||||||||||||||||||||| |||||  |||||||||||||||||    
T  38205442 tgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgt 38205343  T
Q  657 ccatcaaaaaggtccct 673  Q
    |||||||||||||||||    
T  38205342 ccatcaaaaaggtccct 38205326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 558 - 695
Target Start/End: Original strand, 35395333 - 35395470
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||| ||| |||||||| |    |||  ||| || ||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtc 35395432  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||||||||| ||| || ||||||||||    
T  35395433 catcaaaaaggtccctccgtccaagtgctctgttagcc 35395470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 576 - 692
Target Start/End: Original strand, 24496761 - 24496877
Alignment:
Q  576 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 675  Q
    |||||| ||||| || | |||| |||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||| |||||||| ||||| |||    
T  24496761 gtccttaaatttgtacgaatcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatcc 24496860  T
Q  676 gtacaaatgttctgtta 692  Q
    || ||||||||||||||    
T  24496861 gtccaaatgttctgtta 24496877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 33256400 - 33256519
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||| ||||||||||    |||  ||| ||  ||| |||||||||||||||||||||||| ||  |||||||||||||||||    
T  33256400 gagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtc 33256499  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||| ||||||||||    
T  33256500 catcaaaaaagtccctccgt 33256519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 17574328 - 17574442
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 17574427  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  17574428 gtccctccgtccaaa 17574442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 38597012 - 38597084
Alignment:
Q  625 atatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagccgt 697  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| ||||| |||||||||    
T  38597012 atatcaacttagtcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaagtgttccgttagccgt 38597084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 36057727 - 36057613
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||| ||||||||||  |||||||||||||||| |    
T  36057727 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatg 36057628  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  36057627 gtccctccgtccaaa 36057613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 7267853 - 7267967
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| ||| || |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  7267853 tcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 7267952  T
Q  668 gtccctccgtacaaa 682  Q
     ||||||||| ||||    
T  7267953 atccctccgtccaaa 7267967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 30468394 - 30468280
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||| |||||||||||||||| |   || | ||||||| ||| ||||||| ||||||||||| | ||||||| |||||||  |||||||||||||||| |    
T  30468394 tcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatg 30468295  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  30468294 gtccctccgtccaaa 30468280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 649
Target Start/End: Complemental strand, 32090018 - 32089925
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  32090018 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 32089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 649
Target Start/End: Complemental strand, 33257851 - 33257760
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| |||||| ||||||| |||||||||| || |||  ||| || |||||| |||||||||||||||||| ||| |||||||||||||    
T  33257851 gagtggatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 33257760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 554 - 649
Target Start/End: Complemental strand, 40330610 - 40330515
Alignment:
Q  554 ttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||||| | |||||| ||||||| |||||||| | || |||  |||| | ||||||||||||||||||||||||| ||| |||||||||||||    
T  40330610 ttttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40330515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 2179797 - 2179911
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| ||||||||||||| |   |||| ||||||| |||||| |||| || |||||||| | ||| |||||||||||  ||||| |||||||||| |    
T  2179797 tcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccatcaaaatg 2179896  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  2179897 gtccctccgtccaaa 2179911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 566 - 647
Target Start/End: Original strand, 32835884 - 32835965
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| ||||||| |||||||| | || ||| ||||||| |||||| |||||||||||||||||| ||| |||||||||||    
T  32835884 catcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 34327677 - 34327770
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||||| ||| || |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |||| |||||| |||| | ||||||||    
T  34327677 caaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtctctccgtccaaaagctctgttag 34327770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 664
Target Start/End: Complemental strand, 24541326 - 24541230
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 664  Q
    ||||||||||| ||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||    
T  24541326 tcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 21843071 - 21842992
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| ||||||| | |||| ||||||||||||| |||||||||||||||    
T  21843071 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 30463910 - 30463989
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||    
T  30463910 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 42619297 - 42619380
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || ||| |||| || ||||||||||||||||||||||||| ||| |||| ||||||||    
T  42619297 catcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 42619380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 568 - 665
Target Start/End: Original strand, 8539685 - 8539782
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    ||||||||||||||||||||| |   ||| |||||||| || | | |||| ||||||||||| | |||||||||||||||  || |||||||||||||    
T  8539685 tcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaa 8539782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 649
Target Start/End: Original strand, 18726563 - 18726656
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| | |||||| ||||||| |||||||||| || |    ||| || ||||||||||||||||||||||||| ||||||||| |||||||    
T  18726563 ttgagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 18726656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 649
Target Start/End: Original strand, 38176647 - 38176723
Alignment:
Q  573 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| |||||||| |||| | |  |||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38176723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 649
Target Start/End: Original strand, 38203871 - 38203947
Alignment:
Q  573 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| |||||||| |||| | |  |||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 1344897 - 1344814
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||| ||||| | |||||||||||  |||||| |||||||||    
T  1344897 catcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgt 1344814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 2852896 - 2852975
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| ||||| |||||||||    
T  2852896 tcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 682
Target Start/End: Complemental strand, 29621856 - 29621781
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  29621856 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 29621781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 2854440 - 2854327
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| | ||||| ||||| |||||||||||||||  |||||||||| ||||       
T  2854440 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtccaacaaattc 2854342  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  2854341 gtccctccgtccaaa 2854327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 18625122 - 18625008
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |  ||||    ||||| |||||| |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |    
T  18625122 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 18625023  T
Q  668 gtccctccgtacaaa 682  Q
    |||| ||||| ||||    
T  18625022 gtccttccgtccaaa 18625008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 24498143 - 24498065
Alignment:
Q  573 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 651  Q
    ||||||| |||||||  | |||||| ||||| |  |||||||||||||||| | ||||| |||||||||||||||||||    
T  24498143 ttcgtccgtgaatttgcaaggatcggtcaaaatcatccctcaattatgcgataaatcaaattagtccctgaatttgtca 24498065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 42473682 - 42473625
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 664  Q
    |||||| |||||| |||||||||||  ||||||||||||||  |||||||||||||||    
T  42473682 gtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccatcaaa 42473625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 12738815 - 12738736
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  |||||| || ||| |||| ||||||||||| | |||||||||||||||    
T  12738815 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 12801638 - 12801559
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  |||||| || ||| |||| ||||||||||| | |||||||||||||||    
T  12801638 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 664
Target Start/End: Original strand, 27075831 - 27075926
Alignment:
Q  569 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 664  Q
    ||||||| |||||||||||  | ||| ||  ||||||||| || ||||| | | ||||||||| ||||| |||||||||  |||||||||||||||    
T  27075831 caaattcatccttgaatttgcaaggaccggccaaatttgtaccacaatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaa 27075926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 682
Target Start/End: Original strand, 40780599 - 40780674
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||| | ||||||||||| |||||||||||||||  || ||||||||||||   |||||||||| ||||    
T  40780599 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaa 40780674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 649
Target Start/End: Original strand, 35291045 - 35291139
Alignment:
Q  555 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||| | ||||||  |||||| |||||||| | || |||  ||||||  |||||||| |||| |||||||||| ||| |||||||||||||    
T  35291045 tttgagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgt 35291139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 527
Target Start/End: Complemental strand, 38552013 - 38551975
Alignment:
Q  489 aggagcaacaggtttgtcaataaattattttcttacaaa 527  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  38552013 aggagcaaaaggtttgtcaataagttattttcttacaaa 38551975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 647
Target Start/End: Complemental strand, 7269486 - 7269446
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  7269486 gtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 3e-47; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 557 - 693
Target Start/End: Complemental strand, 33038922 - 33038786
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| | |||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33038922 tgagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgt 33038823  T
Q  657 ccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    ||||||||||||||||||||| ||| || ||||||||    
T  33038822 ccatcaaaaaggtccctccgtccaagtgctctgttag 33038786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 558 - 695
Target Start/End: Original strand, 23953805 - 23953942
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||||| |||||||| || ||| | ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  23953805 gagtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtc 23953904  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
     ||||||||||||||||||| ||| || || |||||||    
T  23953905 aatcaaaaaggtccctccgtccaagtgctccgttagcc 23953942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 557 - 694
Target Start/End: Complemental strand, 46996827 - 46996690
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||||||||||| |||||||| | |  |||  ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46996827 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgt 46996728  T
Q  657 ccatcaaaaaggtccctccgtacaaatgttctgttagc 694  Q
    ||||||||||||||||||||| ||| || || ||||||    
T  46996727 ccatcaaaaaggtccctccgtccaagtgctccgttagc 46996690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 555 - 695
Target Start/End: Complemental strand, 47341813 - 47341673
Alignment:
Q  555 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 654  Q
    |||||||| ||||||||||||||||||||||||| | || |||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  47341813 tttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 47341714  T
Q  655 gtccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||  |||||||||||  |||||| ||| || || |||||||    
T  47341713 gttaatcaaaaaggtatctccgtccaagtgctccgttagcc 47341673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 2167479 - 2167598
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||  |||||||||||  || || ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2167479 gagtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcc 2167578  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  2167579 catcaaaaaggtccctccgt 2167598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 566 - 695
Target Start/End: Complemental strand, 38615027 - 38614899
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    |||||||||||||||| |||||| | || |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  38615027 catcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgtcagacgtccat-aaaa 38614929  T
Q  666 aggtccctccgtacaaatgttctgttagcc 695  Q
    | ||||||||||  || || ||||||||||    
T  38614928 atgtccctccgtctaagtgctctgttagcc 38614899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 558 - 671
Target Start/End: Complemental strand, 38613605 - 38613492
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||||| |||||| | || |||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 38613506  T
Q  658 catcaaaaaggtcc 671  Q
    ||| ||||| ||||    
T  38613505 cataaaaaatgtcc 38613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 46812706 - 46812569
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| |||||||||||||||||| |  |||  ||||||  ||||||||||| | |||||||||| ||||||||| |||||||||||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtc 46812607  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||  ||||| ||| || ||||||||||    
T  46812606 catcaaaaaggtcattccgtccaagtgctctgttagcc 46812569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 553 - 677
Target Start/End: Complemental strand, 8423410 - 8423286
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 652  Q
    |||| ||||| |||||||| || |||| |||||||| | || ||   |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  8423410 ttttcgagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcag 8423311  T
Q  653 acgtccatcaaaaaggtccctccgt 677  Q
    ||||| |||||||||||||||||||    
T  8423310 acgtcaatcaaaaaggtccctccgt 8423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 558 - 684
Target Start/End: Original strand, 40784346 - 40784472
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||| |||||||||||| |  ||    |||||  ||| |||||||||||||||||||||||||||  |||||||||||||| ||    
T  40784346 gagtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtctttgaatttgtcagacatc 40784445  T
Q  658 catcaaaaaggtccctccgtacaaatg 684  Q
    |||||||||||||||||||| ||||||    
T  40784446 catcaaaaaggtccctccgtccaaatg 40784472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 566 - 677
Target Start/End: Original strand, 27955378 - 27955489
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    ||||||||||||||||||||||||| |||||    |||||  |||||||||| | ||||||||||||||| |  |||||||||||||||||||||||||     
T  27955378 catcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaag 27955477  T
Q  666 aggtccctccgt 677  Q
    ||||||||||||    
T  27955478 aggtccctccgt 27955489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 600 - 677
Target Start/End: Complemental strand, 35344372 - 35344295
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||    
T  35344372 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 667
Target Start/End: Original strand, 2492333 - 2492436
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    ||||||||||||||||| ||||||||| || ||| ||||| || ||| |||||||||||||||||||||||| | | ||||||| ||| |||||||| ||    
T  2492333 accatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattatgcgaaatatcaacttaatacttgaatttttcaaacgtccataaa 2492432  T
Q  664 aaag 667  Q
    ||||    
T  2492433 aaag 2492436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 45465267 - 45465184
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||||||||||||||||| || ||| |||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  45465267 catcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 664
Target Start/End: Complemental strand, 29996628 - 29996532
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 664  Q
    ||||||||||||||||||||| |   |||| |||| ||||||||| |||| ||||||||||||| ||| |||||||||||  |||||||||||||||    
T  29996628 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtccatcaaa 29996532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 38614875 - 38614792
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | ||||||||||||||||||| ||| |||||||  |||||||||||||| ||||||||||||||||| ||| |||||    
T  38614875 catcaactacgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccttgagtttgt 38614792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 46810713 - 46810796
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | ||||||  |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  46810713 catcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgt 46810796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 39859343 - 39859229
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | ||||||| |||||||  ||||||||| |||||| |    
T  39859343 tcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatg 39859244  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  39859243 gtccctccgtccaaa 39859229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 30108573 - 30108656
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  30108573 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 30108656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 35342433 - 35342516
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| || |||| |||||| ||| || |||  |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  35342433 catcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 35342516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 36756966 - 36756883
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||| | |||||||| |||||||| ||||||| |||||||||||||| |||||||||| ||| || ||||||||||    
T  36756966 catcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36756883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 36762763 - 36762680
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||||| ||||||  |||||| |||||||||||||| |||||||||| |||  ||||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgt 36762680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 36766490 - 36766407
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||| | |||||||| |||||||| ||||||| |||||||||||||| |||||||||| ||| || ||||||||||    
T  36766490 catcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36766407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 608 - 682
Target Start/End: Original strand, 6602385 - 6602459
Alignment:
Q  608 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  6602385 tccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 6602459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 27666179 - 27666065
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  || ||||||||||||       
T  27666179 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatcc 27666080  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  27666079 gtccctccgtccaaa 27666065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 663
Target Start/End: Original strand, 56340 - 56435
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaattt-gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    ||||||||||||||||||||| |   ||||  ||||||| |||||| |||| ||||||||||||| |||||||||||||||  ||||||||||||||    
T  56340 tcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 553 - 649
Target Start/End: Original strand, 4321033 - 4321129
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||| | |||||| ||||||| |||||||| | || |||  ||| || |||||| |||||||||||||||||| ||| |||||||||||||    
T  4321033 tttttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 4321129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 614 - 682
Target Start/End: Complemental strand, 34776983 - 34776915
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||| ||||||||||| | |||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  34776983 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 34776915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 13169762 - 13169683
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||||||||||||| |||| ||||||||||| | |||||||||||||||    
T  13169762 tcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 33775418 - 33775497
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||| ||||||| |||||||||| || ||| |||| || |||| |||||||||||||||||||| ||| |||||||||||    
T  33775418 tcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 33775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 663
Target Start/End: Original strand, 45463668 - 45463775
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||| ||||   |||||||||||  ||||||||||||||||  ||||    
T  45463668 ttgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacg 45463767  T
Q  656 tccatcaa 663  Q
    ||||||||    
T  45463768 tccatcaa 45463775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 649
Target Start/End: Complemental strand, 23955379 - 23955285
Alignment:
Q  555 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||| | |||||| ||||||  ||||||||||||||| |  |||||| |||||| ||||||| |||||||||| ||| || ||||||||||    
T  23955379 tttgagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtcccttaattatgtgaaatatcaatttaatctctgaatttgt 23955285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 682
Target Start/End: Complemental strand, 24228491 - 24228409
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||||| |||| ||||||||||| | |||||| ||||||||  |||||||||||||||| ||||||| ||| ||||    
T  24228491 caaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtcccttcgtccaaa 24228409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 38474257 - 38474143
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| ||||| |||||||||   |||| ||||||| |||||| |||| ||||||||||| | ||||||| |||||||  |||||| | ||||||| |    
T  38474257 tcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcctatcaaaatg 38474158  T
Q  668 gtccctccgtacaaa 682  Q
    |||| ||||| ||||    
T  38474157 gtccatccgtccaaa 38474143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 649
Target Start/End: Original strand, 8421458 - 8421507
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  8421458 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 8421507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 607 - 663
Target Start/End: Original strand, 11682830 - 11682886
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    ||||||||||||||| ||||||||| ||||||| |||||| || |||||||||||||    
T  11682830 gtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaa 11682886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 33037701 - 33037785
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa-cttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||  |||  ||||||  ||||||||||||| ||||||||||  ||| |||||||||||||    
T  33037701 catcaagttcgtccttgaatttttatgtgtcggccaaattcatccctcaattatgtgaaatatcaattttaatccctgaatttgt 33037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 633 - 693
Target Start/End: Complemental strand, 35693419 - 35693359
Alignment:
Q  633 ttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||||||||||||||  |||||||||||||||| ||||||||| | |||| ||||||||||    
T  35693419 ttagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttag 35693359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 649
Target Start/End: Original strand, 46994659 - 46994751
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | |||||| ||||||| |||||||| | || |||  ||| || |||| |||||||||||||||||||| ||| |||||||||||||    
T  46994659 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 46994751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 3690158 - 3690241
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||  | |||  ||| || || |||||||||||||||||||||| ||| ||| |||||||||    
T  3690158 catcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaatttaatccttgaatttgt 3690241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 35403698 - 35403619
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  35403698 tcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 39857655 - 39857734
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||| ||||||    
T  39857655 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 37115640 - 37115526
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||| ||||||||| |   |||  ||||||| || ||| |||| ||| ||||||| | ||||| |||||||||  ||||||||||||||||      
T  37115640 tcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtccatcaaaata 37115541  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  37115540 gtccctccgtccaaa 37115526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 664
Target Start/End: Original strand, 366739 - 366804
Alignment:
Q  599 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 664  Q
    |||||||||||||||| || |  |||||||||| |||||||||||||||  |||||||| ||||||    
T  366739 tcaaatttgtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaa 366804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 682
Target Start/End: Original strand, 20478105 - 20478166
Alignment:
Q  621 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  20478105 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 20478166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 614 - 675
Target Start/End: Original strand, 45359392 - 45359453
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 675  Q
    |||| ||||||||||| | ||||||| |||||||  |||||||||||||||| |||||||||    
T  45359392 aattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctcc 45359453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 6605476 - 6605397
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||| ||||||||||||| |   |||| |||||||||| ||| |||| ||||||||| | | |||||||||||||||    
T  6605476 tcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 13039721 - 13039642
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||| |||||||||||||||| |   ||| |||||||| |||||| |||| ||||||||| | | |||||||||||||||    
T  13039721 tcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattt 13039642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 677
Target Start/End: Complemental strand, 19712331 - 19712268
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    ||||||| |||||||||  |||||| |||||||| | ||||||||||||||| |||||| ||||    
T  19712331 aattatgtgaaatatcacattagtctctgaatttattagacgtccatcaaaatggtcccaccgt 19712268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 27664440 - 27664519
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||| ||||||||||||| |   ||||  ||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  27664440 tcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 663
Target Start/End: Original strand, 34691001 - 34691100
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||||| ||| ||| |||||||||| ||||||  |||||| |||||  ||||   | |||||||||  ||||| ||||||||||| ||||||||||||    
T  34691001 accatcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgtccatcaa 34691100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 35401979 - 35402058
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||   || || |||||| |||| ||||||||||||| |||||||||||||||    
T  35401979 tcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 677
Target Start/End: Complemental strand, 37796249 - 37796186
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    |||| ||||||||||| | |||||||||||||||  | ||||||||||||||  ||||||||||    
T  37796249 aattttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgt 37796186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 40785631 - 40785548
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||||||||||||||| | || |||  ||||||  || |||||||||| ||||||||||  || |||||||||||||    
T  40785631 catcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgt 40785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 649
Target Start/End: Complemental strand, 2168931 - 2168834
Alignment:
Q  552 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| ||||| | |||||| ||||||||||||||||||  | |||  ||||||  ||||| ||||| |  ||||||||| ||||||| |||||||||    
T  2168931 attttggagtgaatcatcaacttcgtccttgaatttttactggtcgtccaaattcatcccttaattaagaaaaatatcaatttagtccttgaatttgt 2168834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 641
Target Start/End: Complemental strand, 46439612 - 46439539
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccct 641  Q
    ||||||||||| |||||||||||   |||||||||| |||||  | |||| ||||||||||| | |||||||||    
T  46439612 tcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 614 - 682
Target Start/End: Original strand, 1546343 - 1546411
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| ||||||||||| ||||    
T  1546343 aattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccctccgtccaaa 1546411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 1e-46; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 556 - 695
Target Start/End: Original strand, 48633875 - 48634014
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| ||||||||||||||||||||||||| | || ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48633875 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 48633974  T
Q  656 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||||||||||| ||| || || |||||||    
T  48633975 tccatcaaaaaggtccctccgtccaagtgctccgttagcc 48634014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 555 - 693
Target Start/End: Complemental strand, 40509038 - 40508900
Alignment:
Q  555 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 654  Q
    |||||||| ||||||||||||||||||||||||| | || |||  |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  40509038 tttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagac 40508939  T
Q  655 gtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||||||||||| |||||||||| ||| ||||| |||||    
T  40508938 gtccatcaaaaatgtccctccgtccaagtgttccgttag 40508900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 31887576 - 31887439
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||||||||||||||||| | |||||| |||||||   || |||||||||||||||||||||||||||||||||||||||||| |||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtc 31887477  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
     ||||||||||||||||||| ||| || || |||||||    
T  31887476 tatcaaaaaggtccctccgtccaagtgctccgttagcc 31887439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 556 - 677
Target Start/End: Complemental strand, 33113306 - 33113185
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| ||||||||||| ||||||||||||||| || |||  |||| |  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  33113306 ttgagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacg 33113207  T
Q  656 tccatcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||||    
T  33113206 tccatcaaaaaggtccctccgt 33113185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 556 - 674
Target Start/End: Original strand, 23774150 - 23774268
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| ||||||||||||||||||||||||| | |  |||  |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23774150 ttgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacg 23774249  T
Q  656 tccatcaaaaaggtccctc 674  Q
    ||||||||||| |||||||    
T  23774250 tccatcaaaaaagtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 552 - 695
Target Start/End: Complemental strand, 18430401 - 18430258
Alignment:
Q  552 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 651  Q
    ||||| ||||| ||||||||||||||||||||||||| | || ||   ||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  18430401 attttggagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtca 18430302  T
Q  652 gacgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||  |||||||||||||||| ||| || || |||||||    
T  18430301 gacgtccaataaaaaggtccctccgtccaagtgctccgttagcc 18430258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 556 - 677
Target Start/End: Complemental strand, 45898474 - 45898353
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| |||||||||||||||| |||||||| |    |||| ||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  45898474 ttgagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacg 45898375  T
Q  656 tccatcaaaaaggtccctccgt 677  Q
    || |||||||||||||||||||    
T  45898374 tctatcaaaaaggtccctccgt 45898353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 557 - 677
Target Start/End: Complemental strand, 24383018 - 24382898
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| ||||||||||| ||||||||||||||| || |||  ||||||  ||| ||||||||| |||||||||||||||||| || |||||||||||||    
T  24383018 tgagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgtcagacgt 24382919  T
Q  657 ccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||    
T  24382918 ccatcaaaaaggtccctccgt 24382898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 558 - 683
Target Start/End: Complemental strand, 23888896 - 23888771
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||| |||||||| |    |||  ||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtc 23888797  T
Q  658 catcaaaaaggtccctccgtacaaat 683  Q
    |||||||||||||||||||| |||||    
T  23888796 catcaaaaaggtccctccgtccaaat 23888771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 558 - 677
Target Start/End: Complemental strand, 41021127 - 41021008
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  41021127 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 41021028  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  41021027 catcaaaaaggtccctccgt 41021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 555 - 676
Target Start/End: Complemental strand, 2977456 - 2977335
Alignment:
Q  555 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 654  Q
    |||||||| | ||||||||||||||||||||||||| | ||||  ||||||  ||||| |||||||||||||||||| | ||||||| ||||||||| ||    
T  2977456 tttgagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatac 2977357  T
Q  655 gtccatcaaaaaggtccctccg 676  Q
    ||||||||||||||||| ||||    
T  2977356 gtccatcaaaaaggtccatccg 2977335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 558 - 677
Target Start/End: Complemental strand, 45257344 - 45257225
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||| |||||||||| | || |||  ||||||  |||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtc 45257245  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||| ||||| ||||||||||    
T  45257244 cataaaaaatgtccctccgt 45257225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 570 - 695
Target Start/End: Complemental strand, 33852782 - 33852657
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggt 669  Q
    ||||| ||||||||||||||| || | | |||||||| |||||||||||||||||||||||| ||| |  |||||||| |||||||||||||||||||||    
T  33852782 aaatttgtccttgaatttttacgggttggtcaaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggt 33852683  T
Q  670 ccctccgtacaaatgttctgttagcc 695  Q
    ||||| || ||| || || |||||||    
T  33852682 ccctctgtccaagtgctccgttagcc 33852657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 552 - 677
Target Start/End: Complemental strand, 39641969 - 39641844
Alignment:
Q  552 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 651  Q
    ||||||||||| ||||||||||| ||||||||||||||| || |||  ||||||  || ||||||||| | || |||||||||||||| | |||||||||    
T  39641969 atttttgagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattattcaaagtatcaacttagtccttaaatttgtca 39641870  T
Q  652 gacgtccatcaaaaaggtccctccgt 677  Q
    ||||| ||| ||||||||||||||||    
T  39641869 gacgttcataaaaaaggtccctccgt 39641844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 51454374 - 51454237
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||||||||||||||||| | ||||||  ||||||  | |||||||||||||||||||||| ||||||  ||||||||||| || ||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgtcaaacatc 51454275  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||| ||||| ||||||| || ||| || || |||||||    
T  51454274 cataaaaaatgtccctctgtccaagtgatccgttagcc 51454237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 53190893 - 53190779
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 53190794  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  53190793 gtccctccgtccaaa 53190779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 568 - 693
Target Start/End: Complemental strand, 30600052 - 30599927
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||||||||||||| ||||||||   ||||  ||||||||||||| |||| ||||||||||| | |||||||||||||||   ||||||| ||||||| |    
T  30600052 tcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatg 30599953  T
Q  668 gtccctccgtacaaatgttctgttag 693  Q
    |||||||||| |||| | ||||||||    
T  30599952 gtccctccgtccaaaagctctgttag 30599927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 54898447 - 54898561
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| |    
T  54898447 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 54898546  T
Q  668 gtccctccgtacaaa 682  Q
    ||| |||||| ||||    
T  54898547 gtctctccgtccaaa 54898561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 568 - 693
Target Start/End: Original strand, 21348733 - 21348858
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| ||||||||||||| |   ||||  |||||| |||| | |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  21348733 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 21348832  T
Q  668 gtccctccgtacaaatgttctgttag 693  Q
    |||||||||| |||| | ||||||||    
T  21348833 gtccctccgtccaaaagctctgttag 21348858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 692
Target Start/End: Original strand, 2660222 - 2660346
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||| ||| || |||||| |||| ||||||||||||| ||||||| |||||||  |||||||||||||||       
T  2660222 tcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattc 2660321  T
Q  668 gtccctccgtacaaatgttctgtta 692  Q
    |||||||||| |||| | |||||||    
T  2660322 gtccctccgtccaaaaggtctgtta 2660346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 23887206 - 23887289
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||| |||   || || ||||||||||||||||||||||||| ||| |||||||||||||    
T  23887206 catcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 23887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 571 - 682
Target Start/End: Complemental strand, 35905843 - 35905732
Alignment:
Q  571 aattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtc 670  Q
    ||||| |||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| ||||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  671 cctccgtacaaa 682  Q
    ||||||| ||||    
T  35905743 cctccgtccaaa 35905732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 45897058 - 45897141
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||||||||||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  45897058 catcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45897141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 48635456 - 48635373
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | |||||| ||||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  48635456 catcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 48635373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 2226286 - 2226172
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| |    
T  2226286 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 2226187  T
Q  668 gtccctccgtacaaa 682  Q
     ||||||||| ||||    
T  2226186 ttccctccgtccaaa 2226172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 27899215 - 27899101
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||| | |||| ||||||||||| | |||||||||||||||  ||||||||||| |||| |    
T  27899215 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccataaaaatg 27899116  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  27899115 gtccctccgtccaaa 27899101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 649
Target Start/End: Original strand, 33111838 - 33111932
Alignment:
Q  555 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||| | |||||| ||||||| |||||||| | || ||| |||||||  |||||||||||||||||||||||| ||| |||||||||||||    
T  33111838 tttgagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgt 33111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 41977760 - 41977874
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||  |||||| ||||  |||||||||||| |||||||||||||||  ||||||||| |||||| |    
T  41977760 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatg 41977859  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  41977860 gtccctccgtccaaa 41977874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 613 - 677
Target Start/End: Original strand, 1845839 - 1845903
Alignment:
Q  613 caattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||    
T  1845839 caattatgcaaaatatcaacttagtctttgaatttgacagacgtccatcaaaaacgtccctccgt 1845903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 649
Target Start/End: Complemental strand, 1847738 - 1847645
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| | ||||||||| ||||||||||||| | || |||  ||||||  |||||||||||||| ||||||||| ||| |||||||||||||    
T  1847738 ttgagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgt 1847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 569 - 649
Target Start/End: Original strand, 2975471 - 2975551
Alignment:
Q  569 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||||||||||||||| |||||    |||||  ||||||||| |||||||||||||| ||| |||||||||||||    
T  2975471 caaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaatttgt 2975551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 3150262 - 3150341
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  3150262 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 572 - 631
Target Start/End: Original strand, 24381758 - 24381817
Alignment:
Q  572 attcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa 631  Q
    ||||||||||||||||||| ||||||  ||||||  ||||||||||||||||||||||||    
T  24381758 attcgtccttgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaa 24381817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 675
Target Start/End: Original strand, 43765147 - 43765254
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| ||||||| || ||  |||| ||||||||||| | |||||  ||||||||  |||||||||||||||| |    
T  43765147 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtccatcaaaatg 43765246  T
Q  668 gtccctcc 675  Q
    ||||||||    
T  43765247 gtccctcc 43765254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 682
Target Start/End: Complemental strand, 3152312 - 3152238
Alignment:
Q  608 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  3152312 tccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaa 3152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 51684620 - 51684734
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||   ||||||  ||||| |||| ||| ||||||| | ||||||| |||||||  |||||||||||||||| |    
T  51684620 tcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtccatcaaaatg 51684719  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  51684720 gtccctccgtccaaa 51684734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 18428757 - 18428822
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa 631  Q
    |||||| ||||||| |||||||||| || ||| |||| || |||||||||||||||||||||||||    
T  18428757 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 18428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 648
Target Start/End: Original strand, 31885531 - 31885608
Alignment:
Q  571 aattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttg 648  Q
    |||||||||||| ||||||| || ||| |||||||  ||||| |||||||||||||||||| ||||| | ||||||||    
T  31885531 aattcgtccttggatttttacgggtcggtcaaattcatcccttaattatgcgaaatatcaatttagtacttgaatttg 31885608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 598 - 649
Target Start/End: Original strand, 37865424 - 37865475
Alignment:
Q  598 atcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  37865424 atcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 37865475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 38193589 - 38193510
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  38193589 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 40508501 - 40508584
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || |||  |||||| |||||| ||||||||||||| |||| ||| |||||||||||||    
T  40508501 catcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgt 40508584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 41979431 - 41979352
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  41979431 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 614 - 693
Target Start/End: Original strand, 42279563 - 42279642
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||| ||| ||||||| | |||||||||||||||  |||||||| ||||||| ||||||||||| |||| | ||||||||    
T  42279563 aattttgcaaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtccaaaagctctgttag 42279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 46308817 - 46308896
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46308817 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 46310515 - 46310436
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||| ||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46310515 tcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 53094352 - 53094273
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  53094352 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 53187752 - 53187831
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||| ||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  53187752 tcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 674
Target Start/End: Original strand, 17515320 - 17515426
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||||||| ||||||||||||||   || |  ||||||  || || |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  17515320 tcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 17515419  T
Q  668 gtccctc 674  Q
    |||||||    
T  17515420 gtccctc 17515426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 693
Target Start/End: Complemental strand, 19987689 - 19987603
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||||| |||| ||||||||||||| ||||||||| |||||  || ||||||||||||   |||||||||| |||| | ||||||||    
T  19987689 gtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttag 19987603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 608 - 682
Target Start/End: Original strand, 44794257 - 44794331
Alignment:
Q  608 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||| |||| ||||||||||||| |||||||||||||||  |||| ||||||||||   |||||||||| ||||    
T  44794257 tccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaa 44794331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 46112497 - 46112611
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| ||   | |||| ||| ||||||| | ||||||| |||||||  |||||||||||||||| |    
T  46112497 tcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatg 46112596  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  46112597 gtccctccgttcaaa 46112611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 693
Target Start/End: Complemental strand, 7884939 - 7884882
Alignment:
Q  636 gtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    ||||||||||||  |||||||||||||||| ||||||||||| |||| |||| |||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttag 7884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 2661987 - 2661908
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||| ||| || |||| | |||| ||||||||||||| ||||||| |||||||    
T  2661987 tcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 627
Target Start/End: Original strand, 30598347 - 30598406
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaata 627  Q
    ||||||||||||||||||||| |   |||| |||||||||||||| |||| |||||||||    
T  30598347 tcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaata 30598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 33850990 - 33851073
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||| | |||||||| | || ||| |||| || ||||||||||||| ||||||||||| ||| || ||||||||||    
T  33850990 catcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgt 33851073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 649
Target Start/End: Original strand, 40998515 - 40998606
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| |||||||| || |||| |||||||| | |  ||| ||||||| |||||||||||||||||||| |||  ||  |||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgt 40998606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 647
Target Start/End: Original strand, 41944582 - 41944665
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||||| ||||||| |||||||| | ||||||  |||||| ||||| |||||   |||||||||||  ||||||||||||||    
T  41944582 accatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaattt 41944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 45255491 - 45255574
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||||| |||||| |||| ||  || ||||||||||| |||||| |  ||| |||||||||||||    
T  45255491 catcaacttcgtccctgaatttttacggatcggtcaacttcatcactcaattatgcaaaatattactttaatccctgaatttgt 45255574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 46611382 - 46611303
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||   |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46611382 tcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 54900153 - 54900074
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| || ||||||||||||    
T  54900153 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 599 - 693
Target Start/End: Original strand, 46197761 - 46197855
Alignment:
Q  599 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    ||||||| ||| || |||| ||| ||||||| | ||||| |||||||||  ||||||||||| |||| ||||||| ||| |||| |||| |||||    
T  46197761 tcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttag 46197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 647
Target Start/End: Original strand, 23291582 - 23291659
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||| ||||||||    
T  23291582 aaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 614 - 682
Target Start/End: Complemental strand, 23293258 - 23293190
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||| ||||||||||| | ||||||| |||||||  || |||||||||||||  |||||||||| ||||    
T  23293258 aattttgcgaaatatctatttagtccatgaattttacaaacgtccatcaaaatagtccctccgtccaaa 23293190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 647
Target Start/End: Original strand, 38191944 - 38191984
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  38191944 gtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 593 - 649
Target Start/End: Complemental strand, 41946155 - 41946099
Alignment:
Q  593 gatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| |||||||||||||||||||   |||||||||||  |||||| |||||||||    
T  41946155 gatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgt 41946099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 633 - 693
Target Start/End: Complemental strand, 44276265 - 44276205
Alignment:
Q  633 ttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    ||||||| |||||||  |||||| ||||||||| ||||||||||| |||| | ||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttag 44276205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 621 - 693
Target Start/End: Complemental strand, 48830887 - 48830815
Alignment:
Q  621 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    ||||||||| | ||||||  |||||||  | |||||||||||||| ||||||||||| |||| | ||||||||    
T  48830887 cgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttag 48830815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 6e-45; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 555 - 695
Target Start/End: Complemental strand, 42897901 - 42897761
Alignment:
Q  555 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 654  Q
    |||||||| |||||||||| |||||||||||||||| || |||  |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42897901 tttgagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagac 42897802  T
Q  655 gtccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||||||||||| ||| || ||||||||||    
T  42897801 gtccatcaaaaaggtccctccgtccaagtgctctgttagcc 42897761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 557 - 694
Target Start/End: Original strand, 32822360 - 32822497
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||| |||||||||||||||||||||||||  ||||||  ||||||||||||   ||||||||||||||||||||||||||||||| ||    
T  32822360 tgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgt 32822459  T
Q  657 ccatcaaaaaggtccctccgtacaaatgttctgttagc 694  Q
    ||||||||||||||| ||||| ||| || | |||||||    
T  32822460 ccatcaaaaaggtccttccgtccaagtgctttgttagc 32822497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 462494 - 462357
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||||||| |||||||||||  |||||  ||||||  ||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  462494 gagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtc 462395  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||| ||||||| | ||| || ||||||||||    
T  462394 catcaaaaagatccctccatccaagtgctctgttagcc 462357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 557 - 677
Target Start/End: Complemental strand, 37526148 - 37526028
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| ||||||||||||||||||||||||| | |  ||| |||||||  | | |||||||||||||||||||||||||||||||||||| |||||| |    
T  37526148 tgagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacat 37526049  T
Q  657 ccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||    
T  37526048 ccatcaaaaaggtccctccgt 37526028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 557 - 695
Target Start/End: Original strand, 31821417 - 31821555
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| || ||||||||||||| |||||||| |    ||| |||| || |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  31821417 tgagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgt 31821516  T
Q  657 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||||||||| ||| |  ||||||||||    
T  31821517 ccatcaaaaaggtccctccgtccaagtcctctgttagcc 31821555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 557 - 695
Target Start/End: Complemental strand, 38882922 - 38882784
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||||  ||| |||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  38882922 tgagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgt 38882823  T
Q  657 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||| ||||| |||||||||| ||| || || |||||||    
T  38882822 ccataaaaaatgtccctccgtccaagtgctccgttagcc 38882784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 564 - 675
Target Start/End: Complemental strand, 33160266 - 33160155
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    ||||||||||||||||||||||||| |  | |||  ||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  33160266 accatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaa 33160167  T
Q  664 aaaggtccctcc 675  Q
    ||||||||||||    
T  33160166 aaaggtccctcc 33160155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 607 - 694
Target Start/End: Complemental strand, 33750459 - 33750372
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagc 694  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| || |||||||||    
T  33750459 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaagtgctctgttagc 33750372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 553 - 677
Target Start/End: Complemental strand, 31201272 - 31201148
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 652  Q
    |||| ||||| |||||||| || |||| |||||||| | || |||  |||||| |||| |||||||||||||||||||| ||| ||||||||||| ||||    
T  31201272 ttttcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcag 31201173  T
Q  653 acgtccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||||||    
T  31201172 acgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 558 - 687
Target Start/End: Original strand, 1320617 - 1320746
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||| |||||| |||||| | || |||   |||||  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtc 1320716  T
Q  658 catcaaaaaggtccctccgtacaaatgttc 687  Q
    ||| || ||||||| ||||| ||| |||||    
T  1320717 cataaataaggtccttccgtccaagtgttc 1320746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 684
Target Start/End: Original strand, 9184382 - 9184509
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| | |||||| |||||||||||||||  | | ||||  |||||| ||| | ||| || |||||||||||| ||||||||||||||||||||||||    
T  9184382 tgagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgt 9184481  T
Q  657 ccatcaaaaaggtccctccgtacaaatg 684  Q
    | ||| ||| ||||||||||| ||||||    
T  9184482 cgatcgaaatggtccctccgtccaaatg 9184509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 8609921 - 8609807
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||||||||| |||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  8609921 tcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 8609822  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  8609821 gtccctccgtccaaa 8609807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 13108470 - 13108356
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||   ||||  |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||| |    
T  13108470 tcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 13108371  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  13108370 gtccctccgtccaaa 13108356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 13282488 - 13282602
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  13282488 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 13282587  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  13282588 gtccctccgtccaaa 13282602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 566 - 663
Target Start/End: Complemental strand, 25707384 - 25707287
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||| ||| ||||| |||||||| | ||||  ||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  25707384 catcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaatttgtgagacgtcaatcaa 25707287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 27691164 - 27691278
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcc 27691263  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  27691264 gtccctccgtccaaa 27691278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 558 - 695
Target Start/End: Original strand, 8654500 - 8654636
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||  |||||||||| |  ||| ||||||| || |||||||||||||||||||||  ||| | | ||||||| |||||||||    
T  8654500 gagtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatcat-ttaattcttgaatttatcagacgtc 8654598  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||| ||||||||||| ||| || || |||||||    
T  8654599 catcaaaagggtccctccgtccaagtgctccgttagcc 8654636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 566 - 663
Target Start/End: Complemental strand, 25373705 - 25373608
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||| ||| |||||||||||| | | ||||  ||||||  | |||||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  25373705 catcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaacttaattcctgaatttgtcagacgtcaatcaa 25373608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 568 - 693
Target Start/End: Complemental strand, 41825778 - 41825653
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||| |  ||||| |||| | |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  41825778 tcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 41825679  T
Q  668 gtccctccgtacaaatgttctgttag 693  Q
    ||| |||||| |||| | ||||||||    
T  41825678 gtcactccgtccaaaagctctgttag 41825653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 553 - 649
Target Start/End: Complemental strand, 31823572 - 31823476
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||||| |||||| ||||||| |||||||| | || |||  ||| || ||||||||||||||||||||||||| ||| ||||| |||||||    
T  31823572 tttttgagtggatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 31823476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 649
Target Start/End: Original strand, 40019155 - 40019247
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | |||||| |||||| ||||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  40019155 tgagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40019247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 675
Target Start/End: Original strand, 38547238 - 38547345
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||| |||||||||||||||| |   ||||  |||||  |||| | |||| ||||||||||||| |||||||||||||||  |||||||||||||||| |    
T  38547238 tcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 38547337  T
Q  668 gtccctcc 675  Q
    ||||||||    
T  38547338 gtccctcc 38547345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 600 - 682
Target Start/End: Complemental strand, 26242416 - 26242334
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||||| |||| ||||||||||| | |||||| ||||||||  |||||||||||||||| ||||||||||| ||||    
T  26242416 caaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaa 26242334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 600 - 682
Target Start/End: Complemental strand, 41042686 - 41042604
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||||||||||| |||| || |||||||| | |||||||||||||||  ||| |||||||||||| ||||||||||| ||||    
T  41042686 caaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaa 41042604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 564 - 661
Target Start/End: Complemental strand, 28433834 - 28433737
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatc 661  Q
    |||||||| ||||||| |||||||| | ||||||  |||||| |||||||||||   |||||||||||  ||||||||||||||||  ||||||||||    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatc 28433737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 599 - 682
Target Start/End: Original strand, 15305838 - 15305921
Alignment:
Q  599 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||| ||||||||| ||||||  |||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  15305838 tcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 15305921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 599 - 682
Target Start/End: Original strand, 15486207 - 15486290
Alignment:
Q  599 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||| ||||||||| ||||||  |||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  15486207 tcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 15486290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 33368767 - 33368850
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||||||||| ||||||||||| | |||| || ||||  || ||||||||||||||||||||| ||| ||| |||||||||    
T  33368767 catcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaatttaatccttgaatttgt 33368850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 42894784 - 42894867
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| || ||| ||||||||| | || |||| |||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  42894784 catcaactttgtctttgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 42894867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 674
Target Start/End: Complemental strand, 13486233 - 13486127
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| || ||||||||||||   |||| ||| ||| ||| ||  ||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  13486233 tcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 13486134  T
Q  668 gtccctc 674  Q
    |||||||    
T  13486133 gtccctc 13486127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 677
Target Start/End: Complemental strand, 9673266 - 9673190
Alignment:
Q  601 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    ||||| |||||| |||| || |||||||| | ||| |||||||||||  |||||||||||||||| |||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 9673190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 461184 - 461267
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||||||||||||||| | || |||  ||||||  ||||||||||||| |||||| ||| ||| |||||||||||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgt 461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 683
Target Start/End: Original strand, 5036455 - 5036570
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||||||||||||| |||||| |   |||  ||||||| |||||| |||| || |||||||| | ||||||| |||||||  |||||||| ||||||| |    
T  5036455 tcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtctatcaaaatg 5036554  T
Q  668 gtccctccgtacaaat 683  Q
    ||| |||||| |||||    
T  5036555 gtctctccgtccaaat 5036570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 29237161 - 29237240
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  29237161 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 33707216 - 33707295
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  33707216 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 35509224 - 35509303
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||| ||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  35509224 tcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 42943505 - 42943426
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||    
T  42943505 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 13284073 - 13283995
Alignment:
Q  569 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||||||||||||||||| |   ||||  ||| ||||||||| |||| ||||||||||||| ||||||| |||||||    
T  13284073 caaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 42941784 - 42941898
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||   |||||| |||||| |||| || |||||||  | |||||||||||||||  |||| |||||||||||      
T  42941784 tcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccatcaaaata 42941883  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  42941884 gtccctccgtccaaa 42941898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 649
Target Start/End: Complemental strand, 32824320 - 32824271
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||||||| ||| || ||||||||||    
T  32824320 caaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgt 32824271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 675
Target Start/End: Original strand, 22272377 - 22272453
Alignment:
Q  599 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 675  Q
    ||||||| |||||| |||| |||| |||||| | |||||||||||||||  || |||||||||||||  ||||||||    
T  22272377 tcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacgtccatcaaaatagtccctcc 22272453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 649
Target Start/End: Original strand, 37524873 - 37524949
Alignment:
Q  573 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||||||||||| || ||| |||||||  ||||| ||||||| ||||||||||  || || ||||||||||    
T  37524873 ttcgtccttgaatttttacgggtcggtcaaattcatcccttaattatgtgaaatatcaatctaatctctgaatttgt 37524949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 601783 - 601704
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  601783 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 649
Target Start/End: Complemental strand, 1322365 - 1322314
Alignment:
Q  598 atcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| || ||||||||||||||| ||||||||| ||| |||||||||||||    
T  1322365 atcaacttcgtccctcaattatgcaaaatatcaatttaatccctgaatttgt 1322314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 27692916 - 27692837
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||| ||||||||| |||||||||||||||    
T  27692916 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 29239266 - 29239187
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  29239266 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 682
Target Start/End: Complemental strand, 33708899 - 33708824
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||| |||||||||| || |||||||||||||||  || ||||||||||||   |||||||||| ||||    
T  33708899 gtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgtccaaa 33708824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 33748340 - 33748423
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || |||  ||| || |||| |||||||||||||||||||| ||| | |||||||||||    
T  33748340 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaattcctgaatttgt 33748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 33762792 - 33762713
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  33762792 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 35510898 - 35510819
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||| | |||| || |||||||||| |||||||||||||||    
T  35510898 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 38548910 - 38548831
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| ||| |||||||||||    
T  38548910 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 647
Target Start/End: Original strand, 8608249 - 8608327
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaa-ttatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||| |   |||| |||| || |||||| || || ||||||||||||| |||||||||||||||    
T  8608249 aaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattt 8608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 649
Target Start/End: Original strand, 24526945 - 24526987
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||||||| |||||||||| ||| |||||||||||||    
T  24526945 gtccctcaattatgtgaaatatcaatttaatccctgaatttgt 24526987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 647
Target Start/End: Original strand, 9671989 - 9672066
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||| |   ||| |||||||| |||| | |||| ||||||||||| | |||||||| ||||||    
T  9671989 aaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 649
Target Start/End: Original strand, 31199527 - 31199576
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||||| ||||||| |||||||||| ||| |||||||||||||    
T  31199527 caaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgt 31199576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 38881436 - 38881501
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa 631  Q
    ||||||||||||||||||||||| | | |||   ||||||  ||||||||||||||||||| ||||    
T  38881436 catcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaa 38881501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 40020759 - 40020654
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| ||||||| ||||| |||| || ||   |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  40020759 gagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 40020660  T
Q  658 catcaa 663  Q
    ||||||    
T  40020659 catcaa 40020654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 647
Target Start/End: Complemental strand, 15308301 - 15308261
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| |||||| ||||||||||| |||||||||||||||    
T  15308301 gtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 647
Target Start/End: Complemental strand, 15488670 - 15488630
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| |||||| ||||||||||| |||||||||||||||    
T  15488670 gtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 647
Target Start/End: Original strand, 33761118 - 33761158
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  33761118 gtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 1e-43; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 553 - 695
Target Start/End: Original strand, 42134477 - 42134619
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 652  Q
    |||| ||||| ||||||||||||||||||||||||||| || |||  |||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  42134477 ttttagagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 42134576  T
Q  653 acgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||||||||||||| ||| || || |||||||    
T  42134577 acgtccatcaaaaaggtccctccgtccaagtgctccgttagcc 42134619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 18184067 - 18183952
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||||||| ||||||||||| || |||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18183968  T
Q  658 catcaaaaaggtccct 673  Q
    ||||||||| ||||||    
T  18183967 catcaaaaatgtccct 18183952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 557 - 695
Target Start/End: Complemental strand, 36895635 - 36895497
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| ||||||||||| |||| |||||||| | |  ||| |||| || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36895635 tgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 36895536  T
Q  657 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||||| ||| ||| || || |||||||    
T  36895535 ccatcaaaaaggtcccttcgtccaagtgctccgttagcc 36895497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 558 - 694
Target Start/End: Complemental strand, 35480099 - 35479963
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| |||||||||||||||| | |||||   ||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtc 35480000  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagc 694  Q
    |||||||||||||| ||||| ||| || |||||||||    
T  35479999 catcaaaaaggtccttccgtccaagtgctctgttagc 35479963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 556 - 695
Target Start/End: Complemental strand, 46638933 - 46638794
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| |||||||||||||| | |||||||| | |  |||  ||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  46638933 ttgagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacg 46638834  T
Q  656 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||| ||||||||||||||||| ||| || || |||||||    
T  46638833 tccaccaaaaaggtccctccgtccaagtgctccgttagcc 46638794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 553 - 677
Target Start/End: Complemental strand, 47269585 - 47269461
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 652  Q
    |||||||||| |||||||||||||||| |||||||| | |  |||  |||||| ||||||||||||| |||||| |||| ||  |||||||||||||||     
T  47269585 tttttgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaa 47269486  T
Q  653 acgtccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||||||    
T  47269485 acgtccatcaaaaaggtccctccgt 47269461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 574 - 695
Target Start/End: Complemental strand, 45381092 - 45380971
Alignment:
Q  574 tcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccct 673  Q
    |||||||| |||||||| ||   | |||||||  |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||    
T  45381092 tcgtccttaaatttttacgggaaggtcaaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcct 45380993  T
Q  674 ccgtacaaatgttctgttagcc 695  Q
    |||| ||| || || |||||||    
T  45380992 ccgtccaagtgctccgttagcc 45380971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 607 - 695
Target Start/End: Original strand, 31801682 - 31801770
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||| || || |||||||    
T  31801682 gtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaaggtccctccgtccaagtgctccgttagcc 31801770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 27940608 - 27940727
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||| |  | | | ||||||| ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtc 27940707  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  27940708 catcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 44157433 - 44157552
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||| |||||||| |||||| | || |||  ||||||  |||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  44157433 gagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtc 44157532  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||| ||||| |||| |||||    
T  44157533 cataaaaaaagtccttccgt 44157552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 4856080 - 4855966
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||  |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||| |    
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 4855981  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  4855980 gtccctccgtccaaa 4855966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 46583670 - 46583556
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| |||| ||||||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  46583670 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattt 46583571  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  46583570 gtccctccgtccaaa 46583556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 568 - 693
Target Start/End: Original strand, 2869589 - 2869714
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||| || |||||  |||||||||||||||| |    
T  2869589 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccatcaaaatg 2869688  T
Q  668 gtccctccgtacaaatgttctgttag 693  Q
    |||||||||| |||| | ||||||||    
T  2869689 gtccctccgtccaaaagctctgttag 2869714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 665
Target Start/End: Complemental strand, 33685372 - 33685265
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||| |||||||||| || ||| |||||||  |||||||||||||||||||||||| ||| ||  ||||||||||| |  ||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttaatcattgaatttgtcacatctc 33685273  T
Q  658 catcaaaa 665  Q
    ||||||||    
T  33685272 catcaaaa 33685265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 34778252 - 34778138
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||  |||||| |||| ||||||||||||| |||||||||||||||  |||| ||||||||||| |    
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatg 34778153  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  34778152 gtccctccgtccaaa 34778138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 568 - 671
Target Start/End: Complemental strand, 31238609 - 31238506
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| ||||||||||||| |   ||||  ||||||||||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  31238609 tcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 31238510  T
Q  668 gtcc 671  Q
    ||||    
T  31238509 gtcc 31238506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 25278482 - 25278368
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||| | | ||||||| |||||||  || ||||||||||||| |    
T  25278482 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtccatcaaaatg 25278383  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  25278382 gtccctccgtccaaa 25278368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 27087293 - 27087407
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||||||||||||| |||||| |   |||| |||||||||||||| |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  27087293 tcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 27087392  T
Q  668 gtccctccgtacaaa 682  Q
    | || ||||| ||||    
T  27087393 gcccatccgtccaaa 27087407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 599 - 693
Target Start/End: Complemental strand, 51896235 - 51896141
Alignment:
Q  599 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||||||||||||| |||| ||||||||||| | |||||||||||||||  |||| |||||||||||  |||||||||| |||| | ||||||||    
T  51896235 tcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaaagctctgttag 51896141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 5784950 - 5784867
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || ||| |||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  5784950 catcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 5784867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 33602758 - 33602644
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| || |||||||||| |||||||||||||||  ||||||||| |||||       
T  33602758 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgtcaaatta 33602659  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  33602658 gtccctccgtccaaa 33602644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 37344352 - 37344466
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||| | | ||||||  |||||||  || ||||||||||||| |    
T  37344352 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtccatcaaaatg 37344451  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  37344452 gtccctccgtccaaa 37344466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 26223597 - 26223676
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  26223597 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 31236829 - 31236908
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||||||||||||| |||| ||||||||||| | ||||| |||||||||    
T  31236829 tcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 42136327 - 42136244
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||| | | ||||||||||||||| |||| || |||| | |||||||||||||||||| ||| |||||||||||||    
T  42136327 catcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgt 42136244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 6575261 - 6575311
Alignment:
Q  627 atcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||||||||| || ||||||||||||| |||||    
T  6575261 atcaacttagtccctgaatttgtcagacatctatcaaaaaggtccttccgt 6575311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 6818792 - 6818678
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||| | ||||||  |||  || ||||||| | |||||||||||||||  |||||||||||||||| |    
T  6818792 tcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 6818693  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  6818692 gtccctccgtccaaa 6818678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 682
Target Start/End: Original strand, 15104483 - 15104565
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| || ||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| ||||| ||||| ||||    
T  15104483 caaattcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaa 15104565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 50556211 - 50556097
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||| ||||||||| |   |||  ||||||| ||| || |||| ||||||||||| | ||||||||| |||||  |||||||| ||||||| |    
T  50556211 tcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtctatcaaaatg 50556112  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  50556111 gtccctccgtccaaa 50556097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 649
Target Start/End: Complemental strand, 27952549 - 27952500
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  27952549 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 27952500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 660
Target Start/End: Complemental strand, 3013590 - 3013498
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 660  Q
    ||||||||||||||||||||| |   |||  ||||||| |||| | |||| ||||||||||| | |||||||||||||||  |||||||||||    
T  3013590 tcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 3013498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 649
Target Start/End: Original strand, 11152544 - 11152636
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | |||||| ||||||| |||||||| | || |||  ||| || ||||||||||||||||||||||||| ||| |||| ||||||||    
T  11152544 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 11152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 649
Target Start/End: Complemental strand, 31803792 - 31803700
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | |||||| ||||||| |||||||| | || |||  ||| || |||| |||||||||||||||||||| ||| |||||||||||||    
T  31803792 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 31803700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 4854420 - 4854499
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||| ||||| |||||||||||||||    
T  4854420 tcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 682
Target Start/End: Complemental strand, 9121743 - 9121668
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  9121743 gtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 9121668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 33679267 - 33679350
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| || |||| |||||||||| || ||   |||||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  33679267 catcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 33679350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 37346041 - 37345962
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||| ||| ||  ||||| |||| ||||||||||||| |||||||||||||||    
T  37346041 tcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 614 - 693
Target Start/End: Original strand, 51121961 - 51122040
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||| ||| ||||||||| || |||||||||||| ||  ||||||||||||| ||||||||||| |||| | ||||||||    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttag 51122040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 5783364 - 5783469
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| ||||||| |||||||||| || |||  ||||||  || | |||||   |||||||||||  ||||||||||||||||  ||||||    
T  5783364 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5783463  T
Q  658 catcaa 663  Q
    ||||||    
T  5783464 catcaa 5783469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 647
Target Start/End: Complemental strand, 6577188 - 6577107
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| ||||||| |||  |||||||| |||   ||||| |||| |||||||||||||||||||| ||| |||||||||||    
T  6577188 catcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaatttaatccctgaattt 6577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 647
Target Start/End: Original strand, 35478095 - 35478176
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| ||| ||| |||||||| | || |||  |||||| ||||||||||||||| ||||||||| ||| |||||||||||    
T  35478095 catcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 660
Target Start/End: Complemental strand, 25279067 - 25278975
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 660  Q
    ||||||||||||||||||||| |   |||   |||||| || ||| |||| ||||||||||| | |||||||||||||||  |||||||||||    
T  25279067 tcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 34776579 - 34776658
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  34776579 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 44159377 - 44159294
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| |  ||||| |||| || |||||| |||||||| ||||||||| ||| | |||||||||||    
T  44159377 catcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgt 44159294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 45379093 - 45379176
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || |||  ||| || |||||| |||||||||||||||||| ||| ||||| |||||||    
T  45379093 catcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgt 45379176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 46582020 - 46582099
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||| ||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46582020 tcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 682
Target Start/End: Complemental strand, 47013157 - 47013082
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||| | ||||||||||| |||||||||||||||  || ||||||||||||   |||||||||| ||||    
T  47013157 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaa 47013082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 647
Target Start/End: Original strand, 33599229 - 33599307
Alignment:
Q  569 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||||||||||||||||| |   |||| ||||||| |||| | |||| ||||||||||||| ||| || ||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 645
Target Start/End: Original strand, 8167952 - 8168029
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaat 645  Q
    ||||||||||||||||||||| |   ||||  ||| || ||| || |||| ||||||||||||| |||||||||||||    
T  8167952 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 649
Target Start/End: Original strand, 18180550 - 18180591
Alignment:
Q  608 tccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||||||||||||||||| ||| | |||||||||||    
T  18180550 tccctcaattatgcgaaatatcaatttaattcctgaatttgt 18180591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 647
Target Start/End: Original strand, 51894575 - 51894656
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||||||||| |||||||||| |   || | ||||||||||| || |||| ||||||||||  | |||||||||||||||    
T  51894575 catcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 557 - 649
Target Start/End: Original strand, 47264123 - 47264215
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||||||| || |||| |||||||| | |  |||  ||| || |||||||||||||||||||| |||| ||  |||||||||||||    
T  47264123 tgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 47264215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 1e-40; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 558 - 695
Target Start/End: Original strand, 37417273 - 37417410
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||| ||||||||||||||||| |||| |||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 37417372  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||||| ||| ||| || || |||||||    
T  37417373 catcaaaaaggtcccttcgtccaagtgctccgttagcc 37417410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 559 - 675
Target Start/End: Original strand, 25619661 - 25619777
Alignment:
Q  559 agtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtcc 658  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||| ||||||||||||||||||||||||||||| | ||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtcc 25619760  T
Q  659 atcaaaaaggtccctcc 675  Q
    |||||||||||||||||    
T  25619761 atcaaaaaggtccctcc 25619777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 29909784 - 29909647
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||| |||| |||||||| | |  |||  ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtc 29909685  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||||||||| ||| || ||||||||||    
T  29909684 catcaaaaaggtccctccgtccaagtgctctgttagcc 29909647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 558 - 669
Target Start/End: Original strand, 15432328 - 15432439
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||  ||||||||||||||||| ||| |||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15432328 gagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtc 15432427  T
Q  658 catcaaaaaggt 669  Q
    ||||||||||||    
T  15432428 catcaaaaaggt 15432439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 564 - 693
Target Start/End: Original strand, 42879362 - 42879490
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||||||||||||||| |||||||| || ||| |||||||  ||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  42879362 accatcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattatgcgaaa-atcaacttagtctatgaatttgtcagacgtccatcaa 42879460  T
Q  664 aaaggtccctccgtacaaatgttctgttag 693  Q
    |||||||||||||| ||| ||||| |||||    
T  42879461 aaaggtccctccgtccaagtgttccgttag 42879490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 604 - 695
Target Start/End: Complemental strand, 39475 - 39384
Alignment:
Q  604 tttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||||| |||||||    
T  39475 tttgtacctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaagtgttccgttagcc 39384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 16763086 - 16763200
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||||||||||||||||||||||   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  16763086 tcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 16763185  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  16763186 gtccctccgtccaaa 16763200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 557 - 677
Target Start/End: Original strand, 15372498 - 15372618
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||| || |||| |||||||| | || |||  |||||| | ||||||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  15372498 tgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgt 15372597  T
Q  657 ccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||    
T  15372598 ccatcaaaaaggtccctccgt 15372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 41706539 - 41706658
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || || | |||||||| | || ||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||  |||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtc 41706638  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  41706639 catcaaaaaggtccctccgt 41706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 564 - 677
Target Start/End: Original strand, 39562 - 39675
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||||| || |||| |||||||||| || |||  |||||| ||||||||||||||||||||||||| ||| ||||||||||| |||| |||| || ||    
T  39562 accatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaa 39661  T
Q  664 aaaggtccctccgt 677  Q
    ||||||||||||||    
T  39662 aaaggtccctccgt 39675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 92470 - 92334
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||||||||||| |||| |||||||| | | |||  |||| || || |||||||||||||||||||||||||||||  ||||||||||||||||     
T  92470 gagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagtctttgaatttgtcagacgtt 92372  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||||| || ||| || || |||||||    
T  92371 catcaaaaaggtccctcagtccaagtgctccgttagcc 92334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 557 - 669
Target Start/End: Original strand, 42001609 - 42001720
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| ||||||||||||||||||||||||||| || | |  ||||||| |||||| ||||||||||||||||| ||| ||| |||||||||||||| |    
T  42001609 tgagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaatttaatccttgaatttgtcagacat 42001708  T
Q  657 ccatcaaaaaggt 669  Q
     ||||||||||||    
T  42001709 -catcaaaaaggt 42001720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 566 - 689
Target Start/End: Complemental strand, 11315451 - 11315328
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    |||||| ||||||||| |||||||||| ||||  |||||| || ||  ||||   |||||||||||  |||| |||||||||||||||||||||||||||    
T  11315451 catcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaa 11315352  T
Q  666 aggtccctccgtacaaatgttctg 689  Q
     ||||||||||| |||||||||||    
T  11315351 tggtccctccgtccaaatgttctg 11315328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 40560265 - 40560358
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||||||||||||  |||||||||| |||| ||||||||||    
T  40560265 caaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccctccgtccaaaagttctgttag 40560358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 674
Target Start/End: Original strand, 2766944 - 2767050
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||||||||||||||||||||||   |||| ||||| | |||| | |||| ||||||||||| | |||||||||||||||  |||||||| ||||||| |    
T  2766944 tcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtctatcaaaatg 2767043  T
Q  668 gtccctc 674  Q
    |||||||    
T  2767044 gtccctc 2767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 39664882 - 39664768
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||  |||| | ||||||||| | |||||||||||||||  |||||||||||||||| |    
T  39664882 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 39664783  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  39664782 gtccctccgtccaaa 39664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 566 - 663
Target Start/End: Original strand, 361453 - 361550
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||| |||||||||||||||| ||| ||||  |||| |  ||||||||||||| |||||||||| ||||||  |||||| ||||||||||||||||    
T  361453 catcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaa 361550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 649
Target Start/End: Complemental strand, 28248267 - 28248175
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  28248267 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 28248175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 647
Target Start/End: Complemental strand, 41234 - 41144
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||| | |||||| ||||||| |||||||| | || |||  |||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  41234 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 14389218 - 14389104
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||| ||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  || | ||||||||||| |    
T  14389218 tcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatg 14389119  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  14389118 gtccctccgtccaaa 14389104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 44709879 - 44709765
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   | ||  |||||| | |||| |||| ||||||||| | | |||||||||||||||  |||||||||||||||| |    
T  44709879 tcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtccatcaaaatg 44709780  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  44709779 gtccctccgtccaaa 44709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 593 - 682
Target Start/End: Complemental strand, 16377306 - 16377217
Alignment:
Q  593 gatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||| |||||||||||||| |||| ||| ||||||| | ||||||| |||||||  || ||||||||||||| ||||||||||| ||||    
T  16377306 gatcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaa 16377217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 675
Target Start/End: Complemental strand, 42519340 - 42519232
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattat-gcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaa 666  Q
    ||||||||||||||||||||| |   || ||||||||| |||| | |||| | || ||||||| | |||||||||||||||  ||||||||||||||||     
T  42519340 tcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaat 42519241  T
Q  667 ggtccctcc 675  Q
    |||||||||    
T  42519240 ggtccctcc 42519232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 11021541 - 11021624
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  11021541 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 11021624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 19908381 - 19908266
Alignment:
Q  568 tcaaattcgtccttgaatttttatgga-tcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaa 666  Q
    ||||||||||||||||||||| |   | |||  |||||| |||||| |||| ||||||||||| | ||||||| |||||||  ||||||||| ||||||     
T  19908381 tcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaat 19908282  T
Q  667 ggtccctccgtacaaa 682  Q
    ||||||||||| ||||    
T  19908281 ggtccctccgtccaaa 19908266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 682
Target Start/End: Complemental strand, 24208137 - 24208062
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||||| ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  24208137 gtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 24208062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 42880894 - 42880811
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||||| || ||| ||||||| |||||| |||||||||||||||||| ||| ||| | |||||||    
T  42880894 catcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgt 42880811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 651
Target Start/End: Complemental strand, 20942074 - 20941989
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 651  Q
    |||||||||||||||||||||| || |||||| |||||||||||||  ||||   ||||||||||  |||||| || |||||||||    
T  20942074 catcaaattcgtccttgaatttgtaaggatcggtcaaatttgtcccctaatttgtcgaaatatcacattagtctctaaatttgtca 20941989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 649
Target Start/End: Complemental strand, 41708479 - 41708430
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  41708479 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 41708430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 649
Target Start/End: Complemental strand, 42003566 - 42003490
Alignment:
Q  573 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| |||||||||||| |||||  ||||||| || | |||||||||||||||||||| ||| || ||||||||||    
T  42003566 ttcgttcttgaatttttaaggatcagtcaaattcgttcatcaattatgcgaaatatcaatttaatctctgaatttgt 42003490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 682
Target Start/End: Complemental strand, 6786076 - 6786001
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| ||||||  |||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  6786076 gtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 6786001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 16764690 - 16764611
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  16764690 tcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 576 - 682
Target Start/End: Original strand, 37020526 - 37020632
Alignment:
Q  576 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 675  Q
    ||||||||||||| |   |||| |||| ||||||| | |||| |  |||||||||| |||||||||||||||  |||||||||||||||   ||||||||    
T  37020526 gtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 37020625  T
Q  676 gtacaaa 682  Q
    || ||||    
T  37020626 gtccaaa 37020632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 28246663 - 28246768
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| ||||||| |||||||||| || |||  |||||| |||||  ||||   |||||||||||  |||| |||||||||||  ||||||    
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgtc 28246762  T
Q  658 catcaa 663  Q
    ||||||    
T  28246763 catcaa 28246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 647
Target Start/End: Original strand, 39663166 - 39663243
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    |||||||||||||||||||||   |||| ||||||| |||||| |||| ||| ||||| | | |||||||||||||||    
T  39663166 aaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 663
Target Start/End: Original strand, 38148501 - 38148601
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatc-aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatca 662  Q
    |||||||| ||||||| |||||||| |  |||||  | ||||||||||| |||||   |||||||||||  ||||||||||||||||  |||||||||||    
T  38148501 accatcaatttcgtccctgaattttcagagatcgggccaaatttgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatca 38148600  T
Q  663 a 663  Q
    |    
T  38148601 a 38148601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 33201 - 33284
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || |||  ||| || |||| ||||||||| |||||||||| ||| |||||||||||||    
T  33201 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgt 33284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 692
Target Start/End: Original strand, 6797550 - 6797641
Alignment:
Q  601 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgtta 692  Q
    ||||| || ||| |||| ||||||||||| | ||||||||| |||||  |||||||| ||||||| ||| ||||||| |||| | |||||||    
T  6797550 aaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtccaaaagctctgtta 6797641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 663
Target Start/End: Complemental strand, 11023130 - 11023032
Alignment:
Q  564 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||||| ||||||| |||||||| | || |||  |||||| ||||| |||||   |||||||||||  ||||||||||||||||  ||||||||||||    
T  11023130 accatcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaa 11023032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 14387359 - 14387438
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  14387359 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 649
Target Start/End: Complemental strand, 15373991 - 15373888
Alignment:
Q  546 atatatatttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaat 645  Q
    |||||| |||||||||| | |||||| || |||| |||||| | |  | |||  |||||| || |||||||||||||||||||||| ||| | |||||||    
T  15373991 atatatttttttgagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaat 15373892  T
Q  646 ttgt 649  Q
    ||||    
T  15373891 ttgt 15373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 17696216 - 17696330
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  ||||||  ||||| |||| ||  ||||||| | |||||||||||||||  || ||||| ||||||| |    
T  17696216 tcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaatcaaaatg 17696315  T
Q  668 gtccctccgtacaaa 682  Q
    ||| |||||| ||||    
T  17696316 gtcactccgtccaaa 17696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 640
Target Start/End: Original strand, 19906694 - 19906764
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccc 640  Q
    ||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | ||||||||    
T  19906694 aaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 614 - 675
Target Start/End: Original strand, 7744099 - 7744160
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 675  Q
    |||| ||||||||||||| || |||||||||||| ||  | ||||||||||| |||||||||    
T  7744099 aattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctcc 7744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 614 - 682
Target Start/End: Original strand, 17946150 - 17946218
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||| ||| ||||||||| || |||||||||||| ||  | ||||||||||| ||||||||||| ||||    
T  17946150 aattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaa 17946218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 568 - 664
Target Start/End: Original strand, 19581424 - 19581520
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 664  Q
    |||||||||||||| ||||||||   |||   ||||||||||||| |||| ||||||||||| | |||||||  ||||||  || | ||||||||||    
T  19581424 tcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtccatcaaa 19581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 614 - 682
Target Start/End: Original strand, 39455225 - 39455293
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||| ||| ||||||| | ||||||| |||||||  |||||||||||||||| |||| |||||| ||||    
T  39455225 aattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatggtctctccgttcaaa 39455293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 6e-39; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 557 - 695
Target Start/End: Complemental strand, 44558618 - 44558480
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||| |||||||||||||||| | || |||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44558618 tgagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 44558519  T
Q  657 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||| ||||| ||| || | ||||||||    
T  44558518 ccatcaaaaaggtccttccgtccaagtgctatgttagcc 44558480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 557 - 677
Target Start/End: Complemental strand, 10372831 - 10372711
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||||||||||| |||||||| | |  |||  |||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  10372831 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgt 10372732  T
Q  657 ccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||    
T  10372731 ccatcaaaaaggtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 47941811 - 47941930
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||||| || ||| ||||||| ||| ||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 47941910  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  47941911 catcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 557 - 677
Target Start/End: Original strand, 10762580 - 10762700
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||||||||||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  ||||||||||||||||||||    
T  10762580 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 10762679  T
Q  657 ccatcaaaaaggtccctccgt 677  Q
    |||||||||||||||||||||    
T  10762680 ccatcaaaaaggtccctccgt 10762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 556 - 675
Target Start/End: Complemental strand, 51042056 - 51041938
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| ||| |||||||||||||| ||||||||  | ||| |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  51042056 ttgagtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgtcagacg 51041957  T
Q  656 tccatcaaaaaggtccctcc 675  Q
    | ||||||||||||||||||    
T  51041956 t-catcaaaaaggtccctcc 51041938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 558 - 695
Target Start/End: Complemental strand, 2350631 - 2350494
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||| |||| |||  |||||||||||||||||||||||||||||||| ||| || |||||||| ||||||||     
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgtt 2350532  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    ||||||||||||||||| || ||| || || |||||||    
T  2350531 catcaaaaaggtccctctgtccaagtgctccgttagcc 2350494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 558 - 695
Target Start/End: Original strand, 35996063 - 35996200
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||  || |||||||||| ||| ||||||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||||    
T  35996063 gagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtc 35996162  T
Q  658 catcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    |||||||||||||||||||| ||| || || |||||||    
T  35996163 catcaaaaaggtccctccgtccaagtgctccgttagcc 35996200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 568 - 695
Target Start/End: Original strand, 27624816 - 27624943
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    |||| |||| ||||||||||||| || | | |||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27624816 tcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 27624915  T
Q  668 gtccctccgtacaaatgttctgttagcc 695  Q
    |||  |||||  || || ||||||||||    
T  27624916 gtcattccgtcaaagtgctctgttagcc 27624943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 558 - 677
Target Start/End: Complemental strand, 44794884 - 44794765
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||| |    ||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 44794785  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  44794784 catcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 607 - 677
Target Start/End: Original strand, 2827453 - 2827523
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2827453 gtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgt 2827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 556 - 695
Target Start/End: Original strand, 4519374 - 4519513
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 655  Q
    ||||||| || ||||||||||||||||||||||||  | | |  ||||||  ||||||||||||||||||||||| ||||| |  ||||||||| ||||     
T  4519374 ttgagtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattatgcgaaatatcagcttagcctttgaatttgttagaca 4519473  T
Q  656 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 695  Q
    | |||||||||||||||||||| |||||| || |||||||    
T  4519474 ttcatcaaaaaggtccctccgtccaaatgctccgttagcc 4519513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 41761860 - 41761746
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||  |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  41761860 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 41761761  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  41761760 gtccctccgtccaaa 41761746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 2828494 - 2828411
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| ||||||||||||| |||  ||| |||||||||||||||||||||||||||| ||| ||| |||||||||    
T  2828494 catcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 2828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 43778397 - 43778480
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||||||||||||||||| || ||| |||| || ||||||||||||||||||||||||| ||| ||||| |||||||    
T  43778397 catcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 43778480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 568 - 693
Target Start/End: Original strand, 51011936 - 51012061
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| |||||||  | | | |||| ||||||||||| | |||||| ||||||||  |||||||||||||||| |    
T  51011936 tcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatg 51012035  T
Q  668 gtccctccgtacaaatgttctgttag 693  Q
    |||||||||| |||| | ||||||||    
T  51012036 gtccctccgtccaaaagctctgttag 51012061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 649
Target Start/End: Complemental strand, 39085244 - 39085152
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | |||||| ||||||| |||||||||| || ||| |||| || ||||||||||||||||||||||||| ||| ||| |||||||||    
T  39085244 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 39085152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 553 - 649
Target Start/End: Complemental strand, 39923103 - 39923007
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||| ||||| |||||||| ||||||| ||||||||||  | |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  39923103 ttttggagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 39923007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 4520534 - 4520451
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||  |||  ||||||  ||| |||||||||||||||||||||||||| | |||||||||    
T  4520534 catcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagttcttgaatttgt 4520451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 41781549 - 41781663
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| || |||||||||| |   |||| |||||||||||||| |||| ||| ||||||  | |||||||||||||||  ||||| |||||||||| |    
T  41781549 tcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatccatcaaaatg 41781648  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  41781649 gtccctccgtccaaa 41781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 43519434 - 43519548
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  || ||||||||||||       
T  43519434 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatcc 43519533  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  43519534 gtccctccgtccaaa 43519548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 567 - 649
Target Start/End: Original strand, 44556629 - 44556711
Alignment:
Q  567 atcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| || |||| |||||||||| || ||| ||||||| |||||||||||||| |||||||||| ||||||| |||||||||    
T  44556629 atcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgt 44556711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 649
Target Start/End: Original strand, 44992806 - 44992899
Alignment:
Q  556 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| ||||||| |||||    
T  44992806 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgt 44992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 600 - 692
Target Start/End: Complemental strand, 13451062 - 13450970
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgtta 692  Q
    |||||| ||||| |||||   |||||||||||  |||||| ||||||| ||||||||||||||||| ||||||||| | |||||| |||||||    
T  13451062 caaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaatgctctgtta 13450970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 557 - 649
Target Start/End: Original strand, 42879274 - 42879366
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| ||| |||||||||    
T  42879274 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 42879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 39083638 - 39083744
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||| ||||   |||||||||||  ||||||||||||||||  |||||    
T  39083638 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 39083737  T
Q  657 ccatcaa 663  Q
    |||||||    
T  39083738 ccatcaa 39083744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 49523134 - 49523248
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||| ||||||||| |   ||||   ||||| |||| | |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| |    
T  49523134 tcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 49523233  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  49523234 gtccctccgtccaaa 49523248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 5484540 - 5484645
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| ||||||| |||||||||| || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5484639  T
Q  658 catcaa 663  Q
    ||||||    
T  5484640 catcaa 5484645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 42980677 - 42980770
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    ||||||||||| | |||| | |||||| || | ||||||||| |||||  |||||||||||||||| ||||||||||| |||| | ||||||||    
T  42980677 caaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttag 42980770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 649
Target Start/End: Original strand, 44792976 - 44793025
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  44792976 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 44793025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 648
Target Start/End: Original strand, 230455 - 230526
Alignment:
Q  577 tccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttg 648  Q
    ||||||| ||| || ||||||  |||| | ||||||||||||||||||||||||| |||||| |||||||||    
T  230455 tccttgagtttgtaaggatcggccaaaatcgtccctcaattatgcgaaatatcaaattagtctctgaatttg 230526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 319283 - 319362
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| ||||| |||||||||    
T  319283 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 4169696 - 4169775
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   || |||||| || ||| || |||| ||||||||||||| |||||||||||||||    
T  4169696 tcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 4173819 - 4173740
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  4173819 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 43507177 - 43507256
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  43507177 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 43508732 - 43508653
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  43508732 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 649
Target Start/End: Complemental strand, 5486150 - 5486052
Alignment:
Q  551 tatttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||| |||||||| ||||||| |||||||||| || |||  ||||||  ||||| ||||   |||||||||||  ||||||||||||||||    
T  5486150 tattttagagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgt 5486052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 39921493 - 39921599
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  |||||    
T  39921493 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 39921592  T
Q  657 ccatcaa 663  Q
    |||||||    
T  39921593 ccatcaa 39921599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 649
Target Start/End: Complemental strand, 47942796 - 47942746
Alignment:
Q  599 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  47942796 tcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 47942746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 649
Target Start/End: Original strand, 10371100 - 10371148
Alignment:
Q  601 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||||||||    
T  10371100 aaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgt 10371148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 39189383 - 39189487
Alignment:
Q  559 agtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtcc 658  Q
    |||| |||||||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  |||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtcc 39189482  T
Q  659 atcaa 663  Q
    |||||    
T  39189483 atcaa 39189487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 647
Target Start/End: Complemental strand, 835113 - 835042
Alignment:
Q  576 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||| |   ||||| ||| ||||||||| |||||| |||||||||||  ||||||||||||||    
T  835113 gtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaattt 835042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 33264392 - 33264471
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||| ||||||||| ||||| |||||||||    
T  33264392 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaattt 33264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 649
Target Start/End: Complemental strand, 39190870 - 39190819
Alignment:
Q  598 atcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| || ||||||||||||||||||||||||| ||| ||| |||||||||    
T  39190870 atcaacttcgtccctcaattatgcgaaatatcaatttaatccgtgaatttgt 39190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 39345574 - 39345653
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||| | | |||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 49524812 - 49524733
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||| ||||| | | |||||||||||||||    
T  49524812 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 51013965 - 51013886
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||| ||||||||| | |||||||||||||    
T  51013965 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaattt 51013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 649
Target Start/End: Complemental strand, 27626777 - 27626728
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| |||| | |||||||||||||||||| ||| |||||||||||||    
T  27626777 caaattagtccatgaattatgcgaaatatcaatttaatccctgaatttgt 27626728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 682
Target Start/End: Complemental strand, 35404526 - 35404445
Alignment:
Q  601 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||| |||| |||||| ||||||||||  | ||| |||||||||||  |||||||||| ||||| ||||| ||||| ||||    
T  35404526 aaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatggtccatccgtccaaa 35404445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 42880879 - 42880774
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  42880879 gagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 42880780  T
Q  658 catcaa 663  Q
    ||||||    
T  42880779 catcaa 42880774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 43779991 - 43779886
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| ||| |||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 43779892  T
Q  658 catcaa 663  Q
    ||||||    
T  43779891 catcaa 43779886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 601 - 649
Target Start/End: Complemental strand, 15450464 - 15450416
Alignment:
Q  601 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||||||||||   |||||||||||  ||||||||||||||||    
T  15450464 aaatttgtccctcaatttaacgaaatatcaaaatagtccctgaatttgt 15450416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 607 - 675
Target Start/End: Complemental strand, 3018507 - 3018439
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 675  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3018507 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 3018439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 29077328 - 29077447
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||||||||||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29077427  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  29077428 catcaaaaaggtccctccgt 29077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 4641355 - 4641474
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||| | || |||  |||||| |||||||||||||| |||||||||| ||| ||||||||||| |||||| ||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 4641454  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  4641455 catcaaaaaggtccctccgt 4641474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 558 - 677
Target Start/End: Original strand, 29112300 - 29112419
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29112399  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  29112400 catcaaaaaggtccctccgt 29112419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 600 - 677
Target Start/End: Original strand, 2968181 - 2968258
Alignment:
Q  600 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 677  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||    
T  2968181 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgt 2968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 566 - 693
Target Start/End: Original strand, 20523374 - 20523501
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    |||||||||| |||| ||||||| |   |||| ||||||| |||| | |||| ||||||||||| | |||||||||||||||  ||||||||||||||||    
T  20523374 catcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaa 20523473  T
Q  666 aggtccctccgtacaaatgttctgttag 693  Q
     ||||||||||| |||| ||||||||||    
T  20523474 tggtccctccgtccaaaagttctgttag 20523501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 568 - 693
Target Start/End: Complemental strand, 32439205 - 32439080
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| ||| ||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  32439205 tcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 32439106  T
Q  668 gtccctccgtacaaatgttctgttag 693  Q
    |||||||||| |||| | ||||||||    
T  32439105 gtccctccgtccaaaagatctgttag 32439080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 570 - 682
Target Start/End: Complemental strand, 13613694 - 13613582
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggt 669  Q
    ||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||   ||    
T  13613694 aaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagt 13613595  T
Q  670 ccctccgtacaaa 682  Q
    |||||||| ||||    
T  13613594 ccctccgtccaaa 13613582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 649
Target Start/End: Original strand, 17950561 - 17950652
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| |||||||| ||| ||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 17950652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 682
Target Start/End: Complemental strand, 7373072 - 7372958
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||  |||||||||||   || | ||||||| |||||| |||| ||||||||||  | |||||||||||||||  ||| |||||||||||| |    
T  7373072 tcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatg 7372973  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  7372972 gtccctccgtccaaa 7372958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 639
Target Start/End: Original strand, 13610702 - 13610771
Alignment:
Q  570 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtcc 639  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||| ||||||||||||| |||||||    
T  13610702 aaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc 13610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 558 - 649
Target Start/End: Complemental strand, 4646307 - 4646216
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| |||||||| ||  ||| |||||||||| |||||| | ||||| |||| |||||||||||||||||||| ||| ||||| |||||||    
T  4646307 gagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgt 4646216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 693
Target Start/End: Original strand, 30891132 - 30891259
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    |||||| ||||| || |||||| || | |||| |||||||| ||| | |||||||| ||||||    ||||||||||||||||||||||||||| ||||     
T  30891132 catcaatttcgttctagaatttgtacgaatcggtcaaatttatccttaaattatgcaaaatatacgtttagtccctgaatttgtcagacgtccaacaaag 30891231  T
Q  666 aggtccctccgtacaaatgttctgttag 693  Q
      |||||||||| |||||| ||| ||||    
T  30891232 tagtccctccgtccaaatgctctattag 30891259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 35175987 - 35175882
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| |||||||||||||||| | ||||||  |||||| ||| |  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 35175888  T
Q  658 catcaa 663  Q
    ||||||    
T  35175887 catcaa 35175882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 10568407 - 10568523
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    ||||||||||||||||||||||| |   |||  ||||||| |||| | ||||  |||||||||  | |||||||||||||||  |||||||| |||||||    
T  10568407 catcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaa 10568506  T
Q  666 aggtccctccgtacaaa 682  Q
      |||||||||| ||||    
T  10568507 tagtccctccgtccaaa 10568523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 682
Target Start/End: Original strand, 3456797 - 3456872
Alignment:
Q  607 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  3456797 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 3456872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 614 - 693
Target Start/End: Original strand, 9398716 - 9398795
Alignment:
Q  614 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 693  Q
    |||| ||||||||||| | |||||||||||||||   |||||| |||||||| ||||||||||| |||| |||| |||||    
T  9398716 aattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttag 9398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 17952167 - 17952061
Alignment:
Q  557 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 656  Q
    |||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  |||||    
T  17952167 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 17952068  T
Q  657 ccatcaa 663  Q
    |||||||    
T  17952067 ccatcaa 17952061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 684
Target Start/End: Original strand, 24662488 - 24662606
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 665  Q
    |||||| |||||||||||||||  | | ||   ||||||| ||||| |||||   |||||||||||  |||||| |||||||||||||||||||| ||||    
T  24662488 catcaacttcgtccttgaatttgcacgaatatgtcaaattcgtcccccaatttaacgaaatatcaaaatagtccatgaatttgtcagacgtccataaaaa 24662587  T
Q  666 aggtccctccgtacaaatg 684  Q
    | |||| |  |||||||||    
T  24662588 atgtccttatgtacaaatg 24662606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 576 - 682
Target Start/End: Complemental strand, 32455997 - 32455891
Alignment:
Q  576 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 675  Q
    ||||||||||||| |   |||| |||| || |||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||   ||||||||    
T  32455997 gtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtccatcaaatcagtccctcc 32455898  T
Q  676 gtacaaa 682  Q
    || ||||    
T  32455897 gtccaaa 32455891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 647
Target Start/End: Complemental strand, 11357275 - 11357194
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||  ||||| ||| |||||||||||||||    
T  11357275 catcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 649
Target Start/End: Complemental strand, 29114873 - 29114776
Alignment:
Q  552 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||||||||| |||||||| || |||| |||||||| | |  |||  |||||| |||| ||||||||||||||| |||| ||  |||||||||||||    
T  29114873 atttttgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaatttcatccctgaatttgt 29114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 649
Target Start/End: Complemental strand, 31210516 - 31210440
Alignment:
Q  573 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    ||||| ||||||||| || |||||| ||||| | |||||| ||||||||||||||| || | | |||||||||||||    
T  31210516 ttcgttcttgaatttgtaaggatcggtcaaaatcgtcccttaattatgcgaaatattaaataaatccctgaatttgt 31210440  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 30639619 - 30639702
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||| ||||||| |||||||| | || |||  |||||| ||||||||||||||| ||||||||| ||| ||  |||||||||    
T  30639619 catcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaatttgt 30639702  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 6899495 - 6899609
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||| ||||||||||||| |   |||  ||||||| ||| || |||| || |||||||| | ||||||||| |||||  ||||| |||||||||| |    
T  6899495 tcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatccatcaaaatg 6899594  T
Q  668 gtccctccgtacaaa 682  Q
    |||||| ||| ||||    
T  6899595 gtcccttcgtccaaa 6899609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 636 - 682
Target Start/End: Original strand, 7049835 - 7049881
Alignment:
Q  636 gtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    ||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 7049881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 11355232 - 11355346
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| ||||||| ||| || |||| |  |||||||| | | | |||||||||||  |||||| ||| ||||| |    
T  11355232 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggccaccaaaatg 11355331  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  11355332 gtccctccgtccaaa 11355346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 32516887 - 32517001
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| | | ||||| | | |||| || |||||||  || |||||||||||||      
T  32516887 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtccatcaaaatt 32516986  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  32516987 gtccctccgtccaaa 32517001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 682
Target Start/End: Complemental strand, 14338520 - 14338475
Alignment:
Q  637 tccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||||||||  |||||||||||||||| ||||||||||| ||||    
T  14338520 tccctgaatttcacagacgtccatcaaaatggtccctccgttcaaa 14338475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 553 - 649
Target Start/End: Original strand, 35174386 - 35174482
Alignment:
Q  553 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 649  Q
    |||||||||| | |||||| ||||||| |||||||||| || |||  ||| || ||  ||||||||| ||||||||||| ||| |  ||||||||||    
T  35174386 tttttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaatttaatttctgaatttgt 35174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 558 - 677
Target Start/End: Complemental strand, 6758 - 6639
Alignment:
Q  558 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 657  Q
    ||||| |||||||| || |||| |||||||| | || |||  |||||| |||||||||||||| |||||||||| ||| ||||||||||| |||||| ||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 6659  T
Q  658 catcaaaaaggtccctccgt 677  Q
    ||||||||||||||||||||    
T  6658 catcaaaaaggtccctccgt 6639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 581 - 663
Target Start/End: Original strand, 2121 - 2203
Alignment:
Q  581 tgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 663  Q
    |||||||||| | ||||| ||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaacttaatccctaaatttgtcagacgtcaatcaa 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 3304 - 3418
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  ||| ||||||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  3304 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 3403  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  3404 gtccctccgtccaaa 3418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 568 - 682
Target Start/End: Original strand, 4476 - 4590
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 667  Q
    ||||||||||||||||||||| |   ||||  ||| ||||||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  4476 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 4575  T
Q  668 gtccctccgtacaaa 682  Q
    |||||||||| ||||    
T  4576 gtccctccgtccaaa 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 14422 - 14343
Alignment:
Q  568 tcaaattcgtccttgaatttttatggatcgatcaaattt-gtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||| |   ||||  ||||||| |||||| |||| ||||||||||||| |||||||||||||||    
T  14422 tcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 682
Target Start/End: Original strand, 1327 - 1387
Alignment:
Q  622 gaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 682  Q
    |||||||| | |||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  1327 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 1387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 647
Target Start/End: Complemental strand, 1636 - 1555
Alignment:
Q  566 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 647  Q
    ||||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||  ||||| ||| |||||||||||||||    
T  1636 catcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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