View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16912_low_35 (Length: 371)

Name: NF16912_low_35
Description: NF16912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16912_low_35
NF16912_low_35
[»] chr3 (40 HSPs)
chr3 (202-355)||(3449384-3449538)
chr3 (9-209)||(3449122-3449323)
chr3 (240-355)||(3463673-3463788)
chr3 (12-209)||(17064419-17064621)
chr3 (9-128)||(25870134-25870253)
chr3 (29-198)||(20756148-20756319)
chr3 (18-128)||(42697046-42697156)
chr3 (11-128)||(27676634-27676751)
chr3 (17-128)||(6136389-6136500)
chr3 (9-128)||(8155941-8156059)
chr3 (29-128)||(13286142-13286241)
chr3 (29-128)||(28745974-28746073)
chr3 (9-127)||(22137476-22137594)
chr3 (31-128)||(24620031-24620128)
chr3 (18-114)||(28135974-28136070)
chr3 (9-128)||(9152797-9152915)
chr3 (9-127)||(21963630-21963748)
chr3 (9-127)||(21986066-21986184)
chr3 (18-128)||(10872536-10872646)
chr3 (9-77)||(41671428-41671496)
chr3 (46-128)||(39428101-39428183)
chr3 (27-122)||(17796771-17796864)
chr3 (27-122)||(19105211-19105304)
chr3 (17-160)||(15515078-15515221)
chr3 (29-209)||(22355898-22356083)
chr3 (17-88)||(8592219-8592290)
chr3 (202-240)||(29067282-29067320)
chr3 (46-128)||(29067475-29067557)
chr3 (204-239)||(24620298-24620333)
chr3 (204-239)||(28745769-28745804)
chr3 (202-240)||(8156224-8156262)
chr3 (202-240)||(22356146-22356184)
chr3 (205-239)||(25870472-25870506)
chr3 (95-128)||(22494680-22494713)
chr3 (205-238)||(24649785-24649818)
chr3 (156-209)||(42696945-42696998)
chr3 (85-125)||(8156121-8156161)
chr3 (202-242)||(17064317-17064357)
chr3 (202-238)||(20756039-20756075)
chr3 (202-234)||(42696870-42696902)
[»] chr7 (49 HSPs)
chr7 (9-198)||(7730171-7730363)
chr7 (9-125)||(39182357-39182473)
chr7 (17-128)||(14055455-14055566)
chr7 (17-128)||(14365483-14365594)
chr7 (17-128)||(21846267-21846378)
chr7 (11-128)||(26565362-26565479)
chr7 (29-128)||(17811546-17811645)
chr7 (9-127)||(8329791-8329909)
chr7 (27-128)||(8329874-8329975)
chr7 (9-126)||(8343614-8343731)
chr7 (9-126)||(22687079-22687188)
chr7 (32-128)||(24725307-24725403)
chr7 (9-128)||(11325177-11325295)
chr7 (9-127)||(8346278-8346396)
chr7 (9-114)||(1977761-1977865)
chr7 (29-128)||(5715483-5715582)
chr7 (18-128)||(27509228-27509343)
chr7 (29-161)||(4247519-4247653)
chr7 (15-128)||(20570703-20570816)
chr7 (15-128)||(24989592-24989704)
chr7 (29-128)||(44944677-44944776)
chr7 (27-128)||(8346361-8346462)
chr7 (29-128)||(5058727-5058825)
chr7 (2-128)||(30294444-30294569)
chr7 (202-238)||(5715290-5715326)
chr7 (44-128)||(6916977-6917060)
chr7 (202-238)||(22687757-22687793)
chr7 (202-238)||(44944942-44944978)
chr7 (202-237)||(5058530-5058565)
chr7 (17-127)||(26617297-26617407)
chr7 (27-88)||(21157523-21157584)
chr7 (29-114)||(27221626-27221711)
chr7 (156-209)||(27509921-27509974)
chr7 (202-238)||(21846518-21846554)
chr7 (202-241)||(26281402-26281441)
chr7 (18-88)||(4574968-4575038)
chr7 (205-239)||(7730438-7730472)
chr7 (204-238)||(11326386-11326420)
chr7 (205-239)||(24725573-24725607)
chr7 (156-197)||(6916890-6916931)
chr7 (169-210)||(7730247-7730288)
chr7 (56-125)||(11326484-11326553)
chr7 (205-238)||(30294175-30294208)
chr7 (15-80)||(48621473-48621538)
chr7 (202-238)||(4247356-4247392)
chr7 (85-125)||(8343791-8343831)
chr7 (201-229)||(11324988-11325016)
chr7 (85-125)||(27221516-27221556)
chr7 (85-125)||(27509934-27509974)
[»] chr6 (39 HSPs)
chr6 (2-128)||(23898009-23898134)
chr6 (17-127)||(30912226-30912336)
chr6 (29-128)||(19748531-19748630)
chr6 (17-128)||(11327382-11327493)
chr6 (29-128)||(22498272-22498371)
chr6 (29-128)||(26053128-26053227)
chr6 (29-128)||(26073181-26073280)
chr6 (61-126)||(10508881-10508946)
chr6 (29-161)||(7918182-7918314)
chr6 (29-128)||(17103393-17103492)
chr6 (9-127)||(2912073-2912191)
chr6 (44-128)||(17543577-17543661)
chr6 (29-128)||(3573732-3573831)
chr6 (29-128)||(7223713-7223812)
chr6 (33-124)||(15527946-15528037)
chr6 (27-128)||(4841659-4841760)
chr6 (202-239)||(6943553-6943590)
chr6 (201-241)||(5422840-5422880)
chr6 (202-238)||(15528203-15528239)
chr6 (204-239)||(7223518-7223553)
chr6 (195-241)||(10509109-10509155)
chr6 (202-239)||(17103201-17103238)
chr6 (202-239)||(17543833-17543870)
chr6 (205-242)||(18491133-18491170)
chr6 (202-238)||(7918474-7918510)
chr6 (205-241)||(21354745-21354781)
chr6 (32-128)||(27233134-27233230)
chr6 (17-88)||(20432413-20432484)
chr6 (204-239)||(30912507-30912542)
chr6 (205-239)||(11327667-11327701)
chr6 (169-210)||(10508905-10508946)
chr6 (205-238)||(17250057-17250090)
chr6 (156-209)||(17250155-17250208)
chr6 (205-238)||(26053392-26053425)
chr6 (205-238)||(26073445-26073478)
chr6 (156-209)||(30912390-30912443)
chr6 (15-88)||(33592969-33593041)
chr6 (85-125)||(7223610-7223650)
chr6 (96-128)||(18490538-18490570)
[»] chr8 (40 HSPs)
chr8 (9-161)||(6810984-6811136)
chr8 (18-128)||(29384133-29384243)
chr8 (17-126)||(17647197-17647306)
chr8 (9-125)||(15231822-15231938)
chr8 (9-112)||(22910015-22910118)
chr8 (27-128)||(23142372-23142473)
chr8 (27-128)||(15761188-15761289)
chr8 (11-111)||(17566313-17566413)
chr8 (17-128)||(45403228-45403338)
chr8 (29-127)||(7489115-7489213)
chr8 (32-159)||(15294835-15294963)
chr8 (32-159)||(15475204-15475332)
chr8 (35-128)||(5922247-5922339)
chr8 (53-128)||(8582241-8582316)
chr8 (29-128)||(11879798-11879897)
chr8 (29-128)||(11897214-11897313)
chr8 (17-127)||(3094064-3094172)
chr8 (29-126)||(32424534-32424631)
chr8 (205-241)||(5922046-5922082)
chr8 (17-127)||(31424366-31424473)
chr8 (202-241)||(23136346-23136385)
chr8 (29-112)||(24414119-24414202)
chr8 (29-160)||(19704289-19704420)
chr8 (44-126)||(24056417-24056499)
chr8 (85-125)||(15294768-15294808)
chr8 (85-125)||(15475137-15475177)
chr8 (205-239)||(477143-477177)
chr8 (202-236)||(15294672-15294706)
chr8 (202-236)||(15475041-15475075)
chr8 (207-241)||(15761537-15761571)
chr8 (29-91)||(40541652-40541714)
chr8 (202-239)||(11879599-11879636)
chr8 (202-239)||(11897015-11897052)
chr8 (156-209)||(27836442-27836495)
chr8 (202-238)||(17646993-17647029)
chr8 (165-209)||(23142273-23142317)
chr8 (96-128)||(26574951-26574983)
chr8 (205-241)||(27672311-27672347)
chr8 (84-128)||(27836351-27836395)
chr8 (96-128)||(30240269-30240301)
[»] scaffold0510 (1 HSPs)
scaffold0510 (2-125)||(9-131)
[»] chr4 (37 HSPs)
chr4 (25-126)||(10143100-10143201)
chr4 (11-124)||(6346769-6346882)
chr4 (9-160)||(5361777-5361928)
chr4 (17-127)||(17466278-17466388)
chr4 (32-128)||(7044961-7045057)
chr4 (29-128)||(8010968-8011067)
chr4 (9-114)||(37240450-37240556)
chr4 (29-128)||(36121021-36121120)
chr4 (29-128)||(5375863-5375962)
chr4 (29-128)||(9770310-9770409)
chr4 (29-128)||(9911243-9911342)
chr4 (29-128)||(23064793-23064892)
chr4 (44-128)||(9149569-9149654)
chr4 (47-128)||(24719773-24719854)
chr4 (12-112)||(10394824-10394924)
chr4 (17-128)||(8889424-8889526)
chr4 (202-239)||(5362056-5362093)
chr4 (11-104)||(5943073-5943166)
chr4 (12-93)||(18459446-18459527)
chr4 (32-107)||(8931441-8931516)
chr4 (27-125)||(7452707-7452804)
chr4 (29-91)||(55476223-55476285)
chr4 (205-237)||(7044728-7044760)
chr4 (11-128)||(7045140-7045259)
chr4 (44-88)||(8743612-8743656)
chr4 (205-241)||(8889225-8889261)
chr4 (156-207)||(37240357-37240408)
chr4 (201-239)||(610682-610720)
chr4 (204-238)||(4156763-4156797)
chr4 (11-84)||(4157269-4157345)
chr4 (11-84)||(4157556-4157632)
chr4 (204-238)||(9149830-9149864)
chr4 (206-239)||(13023566-13023599)
chr4 (79-127)||(4157051-4157099)
chr4 (202-238)||(8011309-8011345)
chr4 (85-125)||(9770210-9770250)
chr4 (85-125)||(9911402-9911442)
[»] chr1 (43 HSPs)
chr1 (17-127)||(32881519-32881629)
chr1 (9-125)||(41032585-41032701)
chr1 (29-128)||(17055751-17055850)
chr1 (9-128)||(47786056-47786175)
chr1 (27-126)||(18304641-18304740)
chr1 (29-128)||(23528854-23528953)
chr1 (9-112)||(30619156-30619258)
chr1 (32-128)||(21846109-21846205)
chr1 (29-121)||(16125287-16125379)
chr1 (29-160)||(13100355-13100487)
chr1 (9-128)||(12513476-12513588)
chr1 (29-128)||(19009780-19009879)
chr1 (17-128)||(16434709-16434818)
chr1 (29-128)||(9351895-9351994)
chr1 (57-127)||(27917232-27917302)
chr1 (17-128)||(25146588-25146700)
chr1 (44-111)||(14074330-14074397)
chr1 (30-128)||(17869583-17869681)
chr1 (205-241)||(9352159-9352195)
chr1 (57-128)||(18228462-18228533)
chr1 (29-127)||(9954865-9954963)
chr1 (71-121)||(13276140-13276190)
chr1 (202-239)||(25146861-25146898)
chr1 (205-238)||(30619075-30619108)
chr1 (44-127)||(9128685-9128768)
chr1 (175-210)||(9128732-9128767)
chr1 (204-239)||(9955130-9955165)
chr1 (151-198)||(19009919-19009966)
chr1 (156-198)||(13276244-13276286)
chr1 (205-239)||(18304907-18304941)
chr1 (202-236)||(19010039-19010073)
chr1 (205-239)||(21846364-21846398)
chr1 (205-238)||(13276362-13276395)
chr1 (205-238)||(14074466-14074499)
chr1 (169-210)||(21846162-21846203)
chr1 (202-239)||(47785791-47785828)
chr1 (85-125)||(9327206-9327246)
chr1 (85-125)||(9955026-9955066)
chr1 (85-125)||(12513379-12513419)
chr1 (85-125)||(13100289-13100329)
chr1 (85-125)||(19009937-19009977)
chr1 (202-238)||(23528656-23528692)
chr1 (165-209)||(32881425-32881469)
[»] scaffold0042 (2 HSPs)
scaffold0042 (12-128)||(93519-93636)
scaffold0042 (205-239)||(93800-93834)
[»] scaffold0603 (1 HSPs)
scaffold0603 (17-128)||(8779-8890)
[»] chr5 (25 HSPs)
chr5 (19-127)||(21058978-21059087)
chr5 (34-128)||(38158101-38158195)
chr5 (32-128)||(43235066-43235162)
chr5 (32-128)||(41688501-41688597)
chr5 (29-128)||(18843913-18844012)
chr5 (17-127)||(27340007-27340117)
chr5 (22-128)||(43005684-43005790)
chr5 (32-128)||(19579141-19579237)
chr5 (32-128)||(20321141-20321237)
chr5 (44-128)||(23172275-23172359)
chr5 (35-124)||(18051371-18051460)
chr5 (69-126)||(19042300-19042356)
chr5 (18-127)||(24648216-24648317)
chr5 (205-240)||(22645815-22645850)
chr5 (205-239)||(18051626-18051660)
chr5 (205-238)||(20923718-20923751)
chr5 (204-237)||(23172527-23172560)
chr5 (205-241)||(21059251-21059287)
chr5 (202-238)||(43234868-43234904)
chr5 (17-91)||(19377838-19377912)
chr5 (85-127)||(22645710-22645752)
chr5 (27-76)||(17624851-17624900)
chr5 (47-88)||(30804172-30804213)
chr5 (205-238)||(38158350-38158383)
chr5 (44-108)||(26021537-26021601)
[»] chr2 (28 HSPs)
chr2 (18-151)||(15588676-15588808)
chr2 (9-128)||(35565766-35565888)
chr2 (32-128)||(30433013-30433109)
chr2 (29-128)||(19262148-19262247)
chr2 (17-128)||(20063921-20064032)
chr2 (18-128)||(13502494-13502604)
chr2 (11-124)||(27406993-27407107)
chr2 (32-124)||(1404985-1405077)
chr2 (11-114)||(16766997-16767101)
chr2 (29-128)||(25538977-25539076)
chr2 (29-128)||(31237808-31237907)
chr2 (29-128)||(36430046-36430145)
chr2 (35-128)||(1690566-1690659)
chr2 (17-88)||(19245827-19245898)
chr2 (19-102)||(29661093-29661176)
chr2 (205-239)||(31238073-31238107)
chr2 (29-88)||(974576-974635)
chr2 (204-239)||(1404782-1404817)
chr2 (204-239)||(15627654-15627689)
chr2 (205-239)||(20063713-20063747)
chr2 (205-239)||(23863417-23863451)
chr2 (202-239)||(19245152-19245189)
chr2 (17-73)||(34167541-34167598)
chr2 (32-108)||(8428440-8428516)
chr2 (17-85)||(20034042-20034110)
chr2 (32-88)||(21869156-21869212)
chr2 (29-85)||(27523928-27523984)
chr2 (85-125)||(31237968-31238008)
[»] scaffold0186 (2 HSPs)
scaffold0186 (15-160)||(8607-8752)
scaffold0186 (205-239)||(8442-8476)
[»] scaffold0016 (1 HSPs)
scaffold0016 (32-128)||(56260-56356)
[»] scaffold0534 (1 HSPs)
scaffold0534 (11-111)||(885-985)
[»] scaffold0417 (1 HSPs)
scaffold0417 (17-128)||(7275-7386)
[»] scaffold0150 (1 HSPs)
scaffold0150 (18-128)||(33131-33246)
[»] scaffold0048 (2 HSPs)
scaffold0048 (27-126)||(61144-61243)
scaffold0048 (44-126)||(48509-48591)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-128)||(145781-145895)
[»] scaffold0079 (1 HSPs)
scaffold0079 (29-85)||(14758-14814)
[»] scaffold0115 (1 HSPs)
scaffold0115 (199-238)||(35149-35188)


Alignment Details
Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 202 - 355
Target Start/End: Original strand, 3449384 - 3449538
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaa-tggtaccaaccgaagatgaaatatctgttgaaataagatcattagtgaatgaagtttcaagac 300  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3449384 tgaattttaggatttaagtcgggattttgacaacaaatggtaccaaccgaagatgaaatatctgttgaaataagatcattagtgaatgaagtttcaagac 3449483  T
Q  301 agttcacttgttggagttatgattacacaaatgaaggcaagaaaatagagtatac 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3449484 agttcacttgttggagttatgattacacaaatgaaggcaagaaaatagagtatac 3449538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 3449122 - 3449323
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3449122 gagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaatgattttattcaactacttttgtagaatcgatataagaaaatgtaaaatcgcaat 3449221  T
Q  109 caaaattgatggattttacc-nnnnnnntaatactaaatatatgttacaaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaatt 207  Q
    ||||||||||||||||||||        ||||||||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||| |||| |||    
T  3449222 caaaattgatggattttaccaaaaaaaataatactaaatatatgtcacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggatt 3449321  T
Q  208 tt 209  Q
    ||    
T  3449322 tt 3449323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 3463788 - 3463673
Alignment:
Q  240 gtaccaaccgaagatgaaatatctgttgaaataagatcattagtgaatgaagtttcaagacagttcacttgttggagttatgattacacaaatgaaggca 339  Q
    |||||||| ||||||| |||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3463788 gtaccaacagaagatggaatatctgttgatataagatcattggttaaagaagtttcaagacagttcacttgttggagtcatgattacacaaatgaaggca 3463689  T
Q  340 agaaaatagagtatac 355  Q
    ||||||||||||||||    
T  3463688 agaaaatagagtatac 3463673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 17064621 - 17064419
Alignment:
Q  12 aagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaa 111  Q
    |||| |||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||| |||| |||||||||| |||||||| ||||||||    
T  17064621 aagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataagaaattgtaaaattgcaatcaa 17064522  T
Q  112 aattgatggattttacc--nnnnnnntaatactaaatatat---gttacaaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaat 206  Q
    ||| |||||||||||||          ||||||||||||||   || | |||||||| | |||||||||||| |||||||||||||||||||  ||||||    
T  17064521 aatcgatggattttaccaaaaaaaaaaaatactaaatatatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaat 17064422  T
Q  207 ttt 209  Q
    |||    
T  17064421 ttt 17064419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 25870134 - 25870253
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||  |||||||||||||||||||||||| |||||||| || ||||||| |||||||  |||||| ||||||||||||||| ||||||||||||||    
T  25870134 gagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatcaaaggattttactcaactaagtttgtagaatcgatataagaaattgtaaaatcgcaat 25870233  T
Q  109 caaaattgatggattttacc 128  Q
    |||||| |||||||||||||    
T  25870234 caaaatcgatggattttacc 25870253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 20756319 - 20756148
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||| ||| ||||||| ||||  | ||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  20756319 tcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 20756220  T
Q  129 --nnnnnnntaatactaaatatatgttacaaatgactcaatttataagaaattgtaaaatcgcaataaaaat 198  Q
             ||||||||||||||||||| |||||||| | |||||||||||| ||||||| ||||| |||||    
T  20756219 caaaagaaataatactaaatatatgttataaatgacttagtttataagaaatcgtaaaattgcaatcaaaat 20756148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 42697156 - 42697046
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattga 117  Q
    |||||||||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||| |||||||||||||||   |||| ||||||||||||| ||    
T  42697156 aaaatcgacaattgtaaaatcgcaactaaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcga 42697057  T
Q  118 tggattttacc 128  Q
    |||||||||||    
T  42697056 tggattttacc 42697046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 27676751 - 27676634
Alignment:
Q  11 gaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatca 110  Q
    ||||| ||||||||| |||| ||||||||||  |||||||||| ||||||| ||||||||||||||| |||||||||||||||  |||||||| ||||||    
T  27676751 gaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactacttttgtaaaatcgatataagaaatcgtaaaatcacaatca 27676652  T
Q  111 aaattgatggattttacc 128  Q
    ||||  ||||||||||||    
T  27676651 aaatcaatggattttacc 27676634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 6136389 - 6136500
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||| | |||||||||||||||  ||||||| || ||||||| |||||||||||| || |||||||||||||||  |||||||| |||||||||| |    
T  6136389 caaaatcaaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaatcg 6136488  T
Q  117 atggattttacc 128  Q
    ||||||||||||    
T  6136489 atggattttacc 6136500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 8155941 - 8156059
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| |||||| ||||||| |||||||||| | || |||||| ||||||| |||||||||||||||  || ||||||||||| ||||||||||||||    
T  8155941 gagaagagcaaaatggacaatcataaaatcgcaactaagatcgaaggattttactcaactacttttgtagcattgatataagaaactgtaaaatcgcaat 8156040  T
Q  109 caaaattgatggattttacc 128  Q
    ||| || | |||||||||||    
T  8156041 caatatcg-tggattttacc 8156059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 13286241 - 13286142
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||||||| || ||||||| ||||||||||||||| |||||||||||||||  |||||||| |||| ||||| |||||||||||||    
T  13286241 tcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggattttacc 13286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 28746073 - 28745974
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||||||||||  |||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  28746073 tcgtaaaatcgcaatcaaaatcgaagaattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 28745974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 22137594 - 22137476
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| |||||||  |||| |||||||| || |||||||| ||  |||||| ||||||||||||||| |||||||||||||||  |||||| |  |||    
T  22137594 gagaagagcaaaatcagcaatagtaaaatcacaaccaaaatcaaagaattttactcaactacttttgtagaatcgatataagaaatcgtaaaaccaaaat 22137495  T
Q  109 caaaattgatggattttac 127  Q
    |||||||||||||||||||    
T  22137494 caaaattgatggattttac 22137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 24620031 - 24620128
Alignment:
Q  31 gtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||  |||||||||| ||||||| ||||  ||||||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  24620031 gtaaaatcgcaatcaaaatcgaaggattttactcaaagacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttacc 24620128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 28136070 - 28135974
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaat 114  Q
    |||||||| ||||||||||||||   |||||||||| ||||||| ||||||||||||||| ||| ||||||||||| |||||||| | |||||||||    
T  28136070 aaaatcgagaatcgtaaaatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaataggaatcaaaat 28135974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 9152797 - 9152915
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||  |||||| ||||||||||||||| | ||||||||||| ||||| | ||||||| ||||||| ||||||| || |||| ||||||||| ||||    
T  9152797 gagaagagtaaaatcaacaatcgtaaaatcgtaaccaaaatcgaaagatttgactcaactatttttgtagaatcgat-tatgaaattgtaaaatcacaat 9152895  T
Q  109 caaaattgatggattttacc 128  Q
    |||||| ||| |||||||||    
T  9152896 caaaatcgatagattttacc 9152915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 21963748 - 21963630
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||| |||||||| || |||||||  ||  |||||| |||| ||||||| || |||||||||||||||  |||||| |  |||    
T  21963748 gagaagagcaaaatcgacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaat 21963649  T
Q  109 caaaattgatggattttac 127  Q
    |||||||||||||||||||    
T  21963648 caaaattgatggattttac 21963630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 21986184 - 21986066
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||| |||||||| || |||||||  ||  |||||| |||| ||||||| || |||||||||||||||  |||||| |  |||    
T  21986184 gagaagagcaaaatcgacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaat 21986085  T
Q  109 caaaattgatggattttac 127  Q
    |||||||||||||||||||    
T  21986084 caaaattgatggattttac 21986066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 10872536 - 10872646
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattga 117  Q
    |||||| | |||| ||||||||||  |||||| ||| ||||||| | ||||||||||| | |||||||||||||||  ||||||||  ||| ||||||||    
T  10872536 aaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactacttttgaagaatcgatataagaaatcgtaaaatcagaataaaaattga 10872635  T
Q  118 tggattttacc 128  Q
    |||||||||||    
T  10872636 tggattttacc 10872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 41671496 - 41671428
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgta 77  Q
    ||||||| ||||||||| ||| ||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  41671496 gagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgta 41671428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 39428183 - 39428101
Alignment:
Q  46 aaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||| ||||||| ||||  | ||||||  |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  39428183 aaatcgaaggattttactcaaagatttttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 39428101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 17796864 - 17796771
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggat 122  Q
    ||||||||||| |||   |||||||||  |||||| ||||||||||||||| |||||  ||||||||  ||||||||| |||||||||||||||||    
T  17796864 aatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatcgaaatcaaaattgatggat 17796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 19105304 - 19105211
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggat 122  Q
    ||||||||||| |||   |||||||||  |||||| ||||||||||||||| |||||  ||||||||  ||||||||| |||||||||||||||||    
T  19105304 aatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatcgaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 15515078 - 15515221
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||||||| ||||||||  | | |||||||||  |||||| |||||||||||| || ||||  || |||||| ||||||||   ||| |||||      
T  15515078 caaaatcgacaattgtaaaatcttaactaaaatcgaagtattttactcaactacttttatagaatcattagaagaaattgtaaaattataataaaaatcc 15515177  T
Q  117 atggattttaccnnnnnnntaatactaaatatatgttacaaatg 160  Q
    ||||||||||||       ||||||||||||||||||| |||||    
T  15515178 atggattttaccaaaaaaataatactaaatatatgttataaatg 15515221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 22355898 - 22356083
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||||||| || ||||||||||||  ||||||||| ||||||||    ||| ||||||| ||||| |||||| |||||||||||||    
T  22355898 tcgtaaaatcgcaatcaaaatcaaaagattttattcaaggacttttgtaaaatcgata----aaattgtaaaaccgcaaacaaaatcgatggattttacc 22355993  T
Q  129 nnnnnnn--taatactaaatatatgttacaaatg-------actcaatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
             ||||| ||||||||||||| |||||       ||| | |||||||||||| ||||||||||||| |||||| ||| |||||    
T  22355994 aaaaaataataataataaatatatgttataaatggtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggatttt 22356083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 8592219 - 8592290
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    ||||||||| | |||||||||||||  |||||||||| ||||||| ||||  ||||||||| ||||||||||    
T  8592219 caaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 8592290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 29067320 - 29067282
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatgg 240  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  29067320 tgaattttagaatttaagtcgggattttgacaacaatgg 29067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 29067557 - 29067475
Alignment:
Q  46 aaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||| ||||||| ||||  | ||||||| ||| |||||  |||  |||||||||||||||||||| |||||||||||||    
T  29067557 aaatcgaaggattttactcaaggatttttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacc 29067475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 24620298 - 24620333
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||||| |||||||||||||||    
T  24620298 aattttaggatttaagtcggaattttgacaacaatg 24620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 28745804 - 28745769
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||| ||||||||||||||||||||    
T  28745804 aattttaggatttaaatcgggattttgacaacaatg 28745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 8156224 - 8156262
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatgg 240  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  8156224 tgaattttagaatttaagttgggattttgacaacaatgg 8156262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 22356146 - 22356184
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatgg 240  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  22356146 tgaattttaggatttaagtcggaattttgataacaatgg 22356184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 25870472 - 25870506
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||| ||||||||||||||||    
T  25870472 attttaggatttaagtcgagattttgacaacaatg 25870506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 22494680 - 22494713
Alignment:
Q  95 tgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||||||||| |||||||||||||    
T  22494680 tgtaaaatcgcaatcaaaatagatggattttacc 22494713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 24649785 - 24649818
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    |||||| |||||||||||||||||||||||||||    
T  24649785 attttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 42696998 - 42696945
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
    |||||||| | |||||||||||| ||||||||||||| |||||  |||||||||    
T  42696998 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 42696945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 8156121 - 8156161
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  8156121 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 8156161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 17064357 - 17064317
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatggta 242  Q
    ||||||||| ||||||||||||||||||||||  |||||||    
T  17064357 tgaattttaagatttaagtcgggattttgacattaatggta 17064317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 20756075 - 20756039
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||  ||||||||||||||||||||||||||    
T  20756075 tgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 42696902 - 42696870
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaa 234  Q
    ||||||||| |||||||||||||||||||||||    
T  42696902 tgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 8e-46; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 7730171 - 7730363
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| |||||||  |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  7730171 gagaagagcaaaatcatcaatcgtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaat 7730270  T
Q  109 caaaattgatggattttac---cnnnnnnntaatactaaatatatgttacaaatgactcaatttataagaaattgtaaaatcgcaataaaaat 198  Q
    |||||||||||||||||||   |        |||||||||||||||||| |||||| | | |||||||||||| |||||||| |||| |||||    
T  7730271 caaaattgatggattttaccaacaaaaaaaaaatactaaatatatgttataaatgatttagtttataagaaatcgtaaaatctcaatcaaaat 7730363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 39182473 - 39182357
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||||||||||     
T  39182473 gagaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaatcgatataagaaattgtaaaatcgcaac 39182374  T
Q  109 caaaattgatggatttt 125  Q
    |||||| ||||||||||    
T  39182373 caaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 14055566 - 14055455
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||| || |||||||||||| || |||||||||||||||||      
T  14055566 caaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatca 14055467  T
Q  117 atggattttacc 128  Q
    ||||||||||||    
T  14055466 atggattttacc 14055455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 14365594 - 14365483
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||| || |||||||||||| || |||||||||||||||||      
T  14365594 caaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatca 14365495  T
Q  117 atggattttacc 128  Q
    ||||||||||||    
T  14365494 atggattttacc 14365483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 21846267 - 21846378
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||| | |||| |||||||||| ||||||||||| ||||||| |||||||||||| || |||||||||||||||  |||||||| ||||||||||||    
T  21846267 caaaatcaaaaatcctaaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattg 21846366  T
Q  117 atggattttacc 128  Q
    ||||||||||||    
T  21846367 atggattttacc 21846378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 26565362 - 26565479
Alignment:
Q  11 gaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatca 110  Q
    ||||||||||| ||| ||||||||||||| |  |||||||||| ||||||| ||||||||||||||| |||| |||||| |||  ||||||| |||||||    
T  26565362 gaagaacaaaaacgaaaatcgtaaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatca 26565461  T
Q  111 aaattgatggattttacc 128  Q
    ||||||||||||||||||    
T  26565462 aaattgatggattttacc 26565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 17811645 - 17811546
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||  ||||||||| ||||||||||  ||| |||||||||||||||||||| |||||||||||||    
T  17811645 tcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacc 17811546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 8329791 - 8329909
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||| |||||||| ||||||| |||||| |||  |||||| ||| ||||||| ||||||||||||||| ||| |||||||||||  |||||||||||||    
T  8329791 gagaataacaaaattgacaatcataaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaat 8329890  T
Q  109 caaaattgatggattttac 127  Q
    ||||||  | |||||||||    
T  8329891 caaaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 8329874 - 8329975
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||||||||  ||||||| || ||||||| ||||||||||||||| ||| |||||||||||  ||||||| |||||||||||  ||||||||||    
T  8329874 aatcgtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggatttta 8329973  T
Q  127 cc 128  Q
    ||    
T  8329974 cc 8329975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 8343614 - 8343731
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||||||||| |||||||||||||  |||  ||||||||||  |||||| ||||||||||||||| ||| ||||||| |||  |||||||||||||    
T  8343614 gagaagaacaaaattgacaatcgtaaaaatgcaatcaaaatcgaagtattttactcaactacttttgtagaattgatataaaaaatcgtaaaatcgcaat 8343713  T
Q  109 caaaattgatggatttta 126  Q
    |||| |  ||||||||||    
T  8343714 caaagtcaatggatttta 8343731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 22687079 - 22687188
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||| |||||||||||| || ||||||| |||  |||||| ||||||||||||||| ||||||||||||        ||||||||||    
T  22687079 gagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaactacttttgtagaatcgatataag--------aaatcgcaat 22687170  T
Q  109 caaaattgatggatttta 126  Q
    ||||||||||||||||||    
T  22687171 caaaattgatggatttta 22687188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 24725307 - 24725403
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  ||||||| || ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  24725307 taaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 24725403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 11325295 - 11325177
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||||||||||||||| ||||| |  || | ||||| |||||||||| |||| ||| ||||| ||||| ||||||||  ||||    
T  11325295 gagaagagcaaaatcgacaatcgtaaaatcgcaaccaaatttcaagggttttactcaactacttctgtaaaattgatat-agaaattgtaaaattacaat 11325197  T
Q  109 caaaattgatggattttacc 128  Q
    |||||| |||||||||||||    
T  11325196 caaaatcgatggattttacc 11325177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 8346278 - 8346396
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||||||||| ||||||||||| |  |||  |||||||||| ||||||| |||||||||||| || ||| |||||||||||  |||| ||||||||    
T  8346278 gagaagaacaaaattgacaatcgtaagaatgcaaacaaaatcgaaggattttactcaactacttttatagaattgatataagaaatcgtaatatcgcaat 8346377  T
Q  109 caaaattgatggattttac 127  Q
    ||||||  | |||||||||    
T  8346378 caaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 1977865 - 1977761
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||  ||||||||||||||||||||||||  |||||||||| ||||||| |||| || |||| || |||||||||||||||   ||||||||||||    
T  1977865 gagaagagaaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaatta-ttttttagaatcgatataagaaatcctaaaatcgcaat 1977767  T
Q  109 caaaat 114  Q
    ||||||    
T  1977766 caaaat 1977761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 5715582 - 5715483
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||  ||||||| ||||  ||||||||| |||||||||| |||| | |||||||||||||||||| |||| ||||||||    
T  5715582 tcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaattttacc 5715483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 27509228 - 27509343
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaa-----atcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaa 112  Q
    |||||||||||||||||||| ||| |||||     || ||| ||||||| |||||||||||| || ||||||||||||||| |||||||||||||| |||    
T  27509228 aaaatcgacaatcgtaaaattgcagccaaattaaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaa 27509327  T
Q  113 attgatggattttacc 128  Q
     | ||| |||||||||    
T  27509328 ttcgattgattttacc 27509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 4247653 - 4247519
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||| || || ||||||| ||||  | ||||||| |||||||||||||||   |||||||||||||||||| |||||||||||||    
T  4247653 tcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttttgtagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacc 4247554  T
Q  129 --nnnnnnntaatactaaatatatgttacaaatga 161  Q
             ||||||||||||||||||||||||||    
T  4247553 taaaaaaaataatactaaatatatgttacaaatga 4247519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 20570703 - 20570816
Alignment:
Q  15 aacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaat 114  Q
    |||||||| || | || ||||||||||  |||||| ||| ||||||| ||||  ||||||||| ||||||||||||||| | ||||||| ||||||||||    
T  20570703 aacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttttgtagaatcgatataagaaattataaaatcacaatcaaaat 20570802  T
Q  115 tgatggattttacc 128  Q
     |||||| ||||||    
T  20570803 cgatggactttacc 20570816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 24989592 - 24989704
Alignment:
Q  15 aacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaat 114  Q
    ||||||||||  | ||||||||| |||  |||||||||| ||||||| | ||  ||||||||| |||||||||| |||| | ||||||||||||||||||    
T  24989592 aacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaat 24989690  T
Q  115 tgatggattttacc 128  Q
     |||||||||||||    
T  24989691 cgatggattttacc 24989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 44944677 - 44944776
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||   |||||||||  |||||| | ||  ||||||||| ||||||||||||||| |||||||||||||||||||| ||| || ||||||    
T  44944677 tcgtaaaatcgcaattaaaatcgaacaattttacttaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttacc 44944776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 8346361 - 8346462
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||| ||||||  ||||||| || ||||||| ||||||||||||||| ||| |||||||||||   ||||||| |||||| |||  ||||||||||    
T  8346361 aatcgtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggatttta 8346460  T
Q  127 cc 128  Q
    ||    
T  8346461 cc 8346462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 5058825 - 5058727
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||| |||  |||||||||| ||||||| ||||  | ||||||  ||||||||||| ||| |||||||||||||||||||| |||||| ||||||    
T  5058825 tcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaattttgtg-aatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttacc 5058727  T

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Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 30294569 - 30294444
Alignment:
Q  2 gtcgagtgagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaa 101  Q
    |||||| | ||||| ||||||| | ||||||||| || ||  |||||||||| ||||||| | |||||||||| || |||||||| ||||||   |||||    
T  30294569 gtcgagagggaagagcaaaatcaaaaatcgtaaa-tcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaa 30294471  T
Q  102 tcgcaatcaaaattgatggattttacc 128  Q
    || |||||||| | |||||||||||||    
T  30294470 tcacaatcaaactcgatggattttacc 30294444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 5715326 - 5715290
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||||||||||||||||||||||||||||||    
T  5715326 tgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 6917060 - 6916977
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||| ||| ||||||| |||||||||||  || ||||||||||||||| | |||||| ||||||||||| |||| ||||||||    
T  6917060 caaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaattttacc 6916977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 22687757 - 22687793
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||||||||||||||||||||||||||||||    
T  22687757 tgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 44944942 - 44944978
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||||||||||||||||||||||||||||||    
T  44944942 tgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 5058565 - 5058530
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaa 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  5058565 tgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 26617297 - 26617407
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||| || |||||| ||||||||| | ||| || || ||||||  |||| || ||||||| ||  ||||||| ||| |||||||||||||||||||| |    
T  26617297 caaaaccgccaatcgaaaaatcgcaactaaattcaaaggattttgctcaattatttttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcg 26617396  T
Q  117 atggattttac 127  Q
    || ||||||||    
T  26617397 attgattttac 26617407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 21157523 - 21157584
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    |||||||||||| ||  |||||| ||| ||||||||||||||||||||||| |||| |||||    
T  21157523 aatcgtaaaatctcaatcaaaattgaaggattttattcaactacttttgtagaatctatata 21157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 27221711 - 27221626
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaat 114  Q
    |||||||||||||  |||||||||| ||||||| ||    ||||||||| ||||||| || |||| |||||||||||||| |||||    
T  27221711 tcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgtagaatcgatgtaggaaattgtaaaatcgcaattaaaat 27221626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 27509921 - 27509974
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
    |||||||| | |||||||||||| ||||||||||||| |||||| |||||||||    
T  27509921 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaatttt 27509974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 21846518 - 21846554
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21846518 tgaattttagaatttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 26281402 - 26281441
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatggt 241  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  26281402 tgaattttatgatttaagtcggaattttgacaacaatggt 26281441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 4575038 - 4574968
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    |||||| | |||||||||||||||  ||||||| ||  ||| || ||||||||||||||| ||||||||||    
T  4575038 aaaatcaaaaatcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgatata 4574968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 7730438 - 7730472
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||| |||||||||||||||||    
T  7730438 attttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Complemental strand, 11326420 - 11326386
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||| |||||||||||||||||    
T  11326420 aattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 24725573 - 24725607
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||| |||||||||||||||||    
T  24725573 attttaggatttaagtctggattttgacaacaatg 24725607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 6916931 - 6916890
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaa 197  Q
    |||||||| |||||||||||||| ||||||||||||| ||||    
T  6916931 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaa 6916890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 7730247 - 7730288
Alignment:
Q  169 tataagaaattgtaaaatcgcaataaaaatttatgaatttta 210  Q
    |||||||||||||||||||||||| |||||| ||| ||||||    
T  7730247 tataagaaattgtaaaatcgcaatcaaaattgatggatttta 7730288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 11326553 - 11326484
Alignment:
Q  56 attttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||| ||||  ||||||||  |||| ||||| |||| |||||||||||||||||||| ||| ||||||    
T  11326553 attttactcaaggacttttgtggaatcaatataggaaattgtaaaatcgcaatcaaaatcgatagatttt 11326484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 30294208 - 30294175
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||||||||| |||||||||||||||||    
T  30294208 attttaggatttaagttgggattttgacaacaat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 48621473 - 48621538
Alignment:
Q  15 aacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataa 80  Q
    ||||||||||| |||||||||||||||    |||| ||| ||||||| |||||||||||| |||||    
T  48621473 aacaaaatcgaaaatcgtaaaatcgcaattgaaattgaaagattttactcaactacttttatataa 48621538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 4247392 - 4247356
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||| | |||||||||||||||||    
T  4247392 tgaattttaggatttaaattgggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 8343791 - 8343831
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  8343791 tataagaaatcgtaaaatcgcaattaaaattgatggatttt 8343831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Complemental strand, 11325016 - 11324988
Alignment:
Q  201 atgaattttaggatttaagtcgggatttt 229  Q
    |||||||||||||||||||||||||||||    
T  11325016 atgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 27221556 - 27221516
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  27221556 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 27221516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 27509934 - 27509974
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  27509934 tataagaaatcgtaaaatcgcaatcaaaattgatgaatttt 27509974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 23898134 - 23898009
Alignment:
Q  2 gtcgagtgagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaa 101  Q
    ||||| |||||||| ||||||||||||||||||||||| | ||||||||||| ||||||| |||||||| |||||| ||||||||||||||| |||||||    
T  23898134 gtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgtagaatcgatataagaaattgtaaaa 23898036  T
Q  102 tcgcaatcaaaattgatggattttacc 128  Q
    || |||||||||| |||||||||||||    
T  23898035 tctcaatcaaaatcgatggattttacc 23898009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 30912226 - 30912336
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| |||||||||||| || ||||||| ||| ||||||||||||||||||||||| |||||||||||||||   || ||||||||||| ||| |    
T  30912226 caaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaactacttttgtaaaatcgatataagaaatcatagaatcgcaatcataatcg 30912325  T
Q  117 atggattttac 127  Q
    |||||||||||    
T  30912326 atggattttac 30912336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 19748630 - 19748531
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  19748630 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 19748531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 11327382 - 11327493
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| | |||||||||||||  ||||||||||  |||||| ||||  ||||||||| |||||||||| |||| ||||||||||||| |||||| |    
T  11327382 caaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcg 11327481  T
Q  117 atggattttacc 128  Q
    ||||||||||||    
T  11327482 atggattttacc 11327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 22498272 - 22498371
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||| ||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  22498272 tcgtaaaatcgcaatcaaaattgaacgattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 22498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 26053128 - 26053227
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||| ||  |||||||||||||||||| ||||  ||||||||| |||||||||  |||| |||||||||||||||||||| |||||||||||||    
T  26053128 tcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc 26053227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 26073181 - 26073280
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||| ||  |||||||||||||||||| ||||  ||||||||| |||||||||  |||| |||||||||||||||||||| |||||||||||||    
T  26073181 tcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc 26073280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 10508881 - 10508946
Alignment:
Q  61 attcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10508881 attcgactacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggatttta 10508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 7918182 - 7918314
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||| |||  ||||||||||  |||||| ||||  ||||||||| |||| ||||| |||| |||||||||||||||||||| |||||||||||||    
T  7918182 tcgtaaaattgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 7918281  T
Q  129 nnnnnnntaatactaaatatatgttacaaatga 161  Q
           ||||||||||| ||||||| ||||||    
T  7918282 aaaaaaataatactaaatttatgttataaatga 7918314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 17103492 - 17103393
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||| | |||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  17103492 tcgtaaaatcgcaatcaataccgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 17103393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 2912073 - 2912191
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| | ||||||| ||||||||||||  |  | |||| ||| ||||||| ||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  2912073 gagaagagcgaaatcgataatcgtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaat 2912172  T
Q  109 caaaattgatggattttac 127  Q
    |||||| || |||||||||    
T  2912173 caaaatcgacggattttac 2912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 17543577 - 17543661
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||| ||||||| ||||  ||||||||| |||||||||  |||| |||||||||||||||||||| |||||||||||||    
T  17543577 caaaatcgaaggattttactcaaggacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc 17543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 3573732 - 3573831
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||| | || |||| ||||||||| ||||| ||| ||||||||||| |||||||||||||||||||| ||||  |||||||    
T  3573732 tcgtaaaatcgcaatcaaaatcgtaggaatttactcaactactcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagttttacc 3573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 7223812 - 7223713
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||| |||  |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||| |||  ||||||||||||    
T  7223812 tcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggattttacc 7223713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 15527946 - 15528037
Alignment:
Q  33 aaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattt 124  Q
    |||||||||  |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| ||||||||||||||| |||| |||||||||    
T  15527946 aaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaatcgatggattt 15528037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 4841659 - 4841760
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    ||||| |||||| ||  ||||||| || ||||||| ||||||||||||||| |||||  ||||||||  ||||||||||||||||||| |||| ||||||    
T  4841659 aatcgaaaaatcacaatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtatttta 4841758  T
Q  127 cc 128  Q
    ||    
T  4841759 cc 4841760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 6943553 - 6943590
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6943553 tgaattttaggatttaagtcgggattttgacaacaatg 6943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 5422840 - 5422880
Alignment:
Q  201 atgaattttaggatttaagtcgggattttgacaacaatggt 241  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  5422840 atgaattttagtatttaagtcgggattttgacaacaatggt 5422880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 15528203 - 15528239
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||||||||||||||||||||||||||||||    
T  15528203 tgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 7223553 - 7223518
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||||||||||||||||||||||    
T  7223553 aattttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 10509109 - 10509155
Alignment:
Q  195 aaatttatgaattttaggatttaagtcgggattttgacaacaatggt 241  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||    
T  10509109 aaatttctgaattttaggatttaagtctggattttgacaataatggt 10509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 17103238 - 17103201
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  17103238 tgaattttaagatttaagtcgggattttgacaacaatg 17103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 17543833 - 17543870
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17543833 tgaattttaggatttaagtcgagattttgacaacaatg 17543870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 18491133 - 18491170
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatggta 242  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  18491133 attttaggatttaagtcgggattttgacagcaatggta 18491170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 7918474 - 7918510
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7918474 tgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 21354781 - 21354745
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatggt 241  Q
    |||||||||||||||| ||||||||||||||||||||    
T  21354781 attttaggatttaagttgggattttgacaacaatggt 21354745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 27233134 - 27233230
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||| ||| ||||||| ||||   |||| ||| ||||| ||||  ||| |||||||||||||||||||| ||| |||||||||    
T  27233134 taaaatcgcaatcaaaattgaaggattttactcaaggtctttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcgatagattttacc 27233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 20432413 - 20432484
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    ||||||||| |||||||||||||||  |||||| |||  |||||| | ||||| ||||||| ||||||||||    
T  20432413 caaaatcgaaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatata 20432484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 30912507 - 30912542
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||| ||||||||||||||||||    
T  30912507 aattttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 11327667 - 11327701
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||| ||||||||||||||||||||||||||    
T  11327667 attttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 10508905 - 10508946
Alignment:
Q  169 tataagaaattgtaaaatcgcaataaaaatttatgaatttta 210  Q
    |||||||||||||||||||||||| |||||| ||| ||||||    
T  10508905 tataagaaattgtaaaatcgcaatcaaaattgatggatttta 10508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 17250090 - 17250057
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||||||||||| ||||||||    
T  17250090 attttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 17250208 - 17250155
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
    |||||||| | |||||||||||| ||||||||||||| |||||  |||||||||    
T  17250208 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaatttt 17250155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 26053392 - 26053425
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    |||||| |||||||||||||||||||||||||||    
T  26053392 attttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 26073445 - 26073478
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    |||||| |||||||||||||||||||||||||||    
T  26073445 attttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 30912390 - 30912443
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
    |||||||| | |||||||||||| ||||||||||||| ||||| |||| |||||    
T  30912390 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggatttt 30912443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 33592969 - 33593041
Alignment:
Q  15 aacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    |||||||| || ||||||||||| |||  | ||||||||||| |||| ||||||||||||||| ||| ||||||    
T  33592969 aacaaaattgaaaatcgtaaaattgcaatcgaaatcgaatga-tttactcaactacttttgtagaattgatata 33593041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 7223650 - 7223610
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  7223650 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 7223610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 18490538 - 18490570
Alignment:
Q  96 gtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||||||||||||||||| ||||    
T  18490538 gtaaaatcgcaatcaaaattgatggattctacc 18490570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 6811136 - 6810984
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||| ||| ||||||||||| || |||||||||||    
T  6811136 gagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaattttaatcaactacttttgtagaatagatataagaaattg-aaaatcgcaat 6811038  T
Q  109 caaaattgatggattttacc-nnnnnnntaatactaaatatatgttacaaatga 161  Q
    |||||| |||||||||||||        ||||||||||||||||||| ||||||    
T  6811037 caaaatcgatggattttaccaaaaaaaataatactaaatatatgttataaatga 6810984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 29384133 - 29384243
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattga 117  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||  ||||||||||  ||||||||||||||||||| ||    
T  29384133 aaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcga 29384232  T
Q  118 tggattttacc 128  Q
    |||||||||||    
T  29384233 tggattttacc 29384243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 17647306 - 17647197
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    |||||||||||||| ||||||||||  |||||||||| ||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||||| |    
T  17647306 caaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 17647207  T
Q  117 atggatttta 126  Q
    ||||||||||    
T  17647206 atggatttta 17647197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 15231938 - 15231822
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||||||||||||||| | ||||||| | ||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  15231938 gagaagagcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaactacttttgtagaatcgatataaaaaattgtaaaatcgcaat 15231839  T
Q  109 caaaattgatggatttt 125  Q
    ||||  || ||||||||    
T  15231838 caaatatgttggatttt 15231822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 22910015 - 22910118
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||  |||||||||||||||||||||||| || |||| ||| ||||||||||||||| ||||||| |||||||||||||||  |||||||||||||    
T  22910015 gagaagagaaaaatcgacaatcgtaaaatcgcaaccgaaattgaaggattttattcaactatttttgtagaatcgatataagaaatcgtaaaatcgcaat 22910114  T
Q  109 caaa 112  Q
    ||||    
T  22910115 caaa 22910118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 23142473 - 23142372
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||||||||    |||||||||||||||| ||||  ||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  23142473 aatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacttta 23142374  T
Q  127 cc 128  Q
    ||    
T  23142373 cc 23142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 15761188 - 15761289
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||||||||    |||||||| ||||||| |||| |||||||||| ||||||||||||||   ||||||||||||||||||| |||||||||||    
T  15761188 aatcgtaaaatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggatttta 15761287  T
Q  127 cc 128  Q
    ||    
T  15761288 cc 15761289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 17566413 - 17566313
Alignment:
Q  11 gaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatca 110  Q
    ||||| |||||| || ||||||||||| |||  ||||||||||  |||||| ||||||||||||||| ||  ||||||||||| ||||||||||||||||    
T  17566413 gaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgcaatca 17566314  T
Q  111 a 111  Q
    |    
T  17566313 a 17566313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 45403338 - 45403228
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| | |||||||||||||  |||||||||| ||||||| | ||  ||||||||| |||||||||| |||| ||||||| |||||||||||| |    
T  45403338 caaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttgtagaatcgatataggaaattgtaaaa-cgcaatcaaaatcg 45403240  T
Q  117 atggattttacc 128  Q
    || |||||||||    
T  45403239 atagattttacc 45403228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 7489115 - 7489213
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttac 127  Q
    |||||||||||||  |||||||| | ||||||| ||||  ||||||||| ||||||||||  ||| |||||||||||||||||||| |||| |||||||    
T  7489115 tcgtaaaatcgcaatcaaaatcggaggattttactcaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttac 7489213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 15294963 - 15294835
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc-nn 130  Q
    ||||||||||  |||||||||| ||||||| ||||  ||||||||| |||| ||||||||||   ||||||||||| ||||||  ||||||||||||       
T  15294963 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacctaa 15294864  T
Q  131 nnnnntaatactaaatatatgttacaaat 159  Q
         ||||||||||||||||||||||||    
T  15294863 aaaaataatactaaatatatgttacaaat 15294835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 15475332 - 15475204
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc-nn 130  Q
    ||||||||||  |||||||||| ||||||| ||||  ||||||||| |||| ||||||||||   ||||||||||| ||||||  ||||||||||||       
T  15475332 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacctaa 15475233  T
Q  131 nnnnntaatactaaatatatgttacaaat 159  Q
         ||||||||||||||||||||||||    
T  15475232 aaaaataatactaaatatatgttacaaat 15475204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 5922339 - 5922247
Alignment:
Q  35 aatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||  |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||  ||| |||||||||||||    
T  5922339 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc-taatcgatggattttacc 5922247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 8582316 - 8582241
Alignment:
Q  53 atgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||| ||||||||||||||| ||| |||||||||||  |||||||  |||||||||| |||| ||||||||    
T  8582316 atgattttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaattttacc 8582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 11879897 - 11879798
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| |||||||   ||  |||||| || ||||||||||  ||| |||||||||||| ||||||| |||||||||||||    
T  11879897 tcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc 11879798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 11897313 - 11897214
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| |||||||   ||  |||||| || ||||||||||  ||| |||||||||||| ||||||| |||||||||||||    
T  11897313 tcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc 11897214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 3094064 - 3094172
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgt-aaaatcgcaatcaaaatt 115  Q
    ||||||||||||||||||||  ||| | ||||| ||| ||||||| |||| |||||||||   |   |||||||||| ||| ||||||||||||||||||    
T  3094064 caaaatcgacaatcgtaaaactgcaacaaaaattgaaggattttactcaattacttttgt---aggcatataagaaattgtaaaaatcgcaatcaaaatt 3094160  T
Q  116 gatggattttac 127  Q
    ||| ||||||||    
T  3094161 gatagattttac 3094172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 32424631 - 32424534
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||||||   ||||||||| ||||||| ||||  | ||||||| |||||| ||| |||| |||||||||||||| ||||| ||| |||||||    
T  32424631 tcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaatcgcaataaaaatcgatagatttta 32424534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 5922082 - 5922046
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatggt 241  Q
    |||||||||||||||||||||||||||||||||||||    
T  5922082 attttaggatttaagtcgggattttgacaacaatggt 5922046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 31424473 - 31424366
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    |||||||||||||||||||||||||  |||||  |   ||||||| ||||||||| ||||  ||| |||||||||||  ||||||| |||||| |||| |    
T  31424473 caaaatcgacaatcgtaaaatcgcaatcaaaacag---gattttactcaactactcttgtggaattgatataagaaatagtaaaattgcaatccaaatcg 31424377  T
Q  117 atggattttac 127  Q
    || ||||||||    
T  31424376 atagattttac 31424366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 23136385 - 23136346
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatggt 241  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  23136385 tgaattttaggatttaagtcgggattttgacaataatggt 23136346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 24414119 - 24414202
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaa 112  Q
    |||||||||||||  |||||||||| ||||||| ||||  | ||||||| |||||||||| |||| |||||||||  |||||||    
T  24414119 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatttttgtagaatcgatataggaaattgtaaaatcctaatcaaa 24414202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 19704289 - 19704420
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||||||| || || |||| ||||  ||| ||||| |||||||||  ||||   ||||||| |||||||||| |||||||||||||    
T  19704289 tcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgatatttgaaatcttaaaatcacaatcaaaatcgatggattttacc 19704388  T
Q  129 nnnnnnntaatactaaatatatgttacaaatg 160  Q
            || |||||||||||||||||||||    
T  19704389 taaaaaaaaaaactaaatatatgttacaaatg 19704420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 24056417 - 24056499
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||| ||||||| ||||||| ||||||| |||| |||||| |||   |||||||||||||| ||| ||| |||||||    
T  24056417 caaaatcgaaggattttactcaactagttttgtagaatcaatataacaaatgttaaaatcgcaatcataatcgatagatttta 24056499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 15294808 - 15294768
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  15294808 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 15294768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 15475177 - 15475137
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  15475177 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 15475137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 477143 - 477177
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||| |||||||||||||||||    
T  477143 attttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 15294706 - 15294672
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaaca 236  Q
    |||||||||||||||||||||||||||| ||||||    
T  15294706 tgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 15475075 - 15475041
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaaca 236  Q
    |||||||||||||||||||||||||||| ||||||    
T  15475075 tgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Original strand, 15761537 - 15761571
Alignment:
Q  207 tttaggatttaagtcgggattttgacaacaatggt 241  Q
    |||||||||||||||| ||||||||||||||||||    
T  15761537 tttaggatttaagtcgagattttgacaacaatggt 15761571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 40541652 - 40541714
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataaga 91  Q
    |||||||||||||  |||||| ||| ||||||||||||  |||| |||| |||||||||||||    
T  40541652 tcgtaaaatcgcaatcaaaattgaaagattttattcaaggacttctgtagaatcgatataaga 40541714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 11879636 - 11879599
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||||| | |||||||||||||||    
T  11879636 tgaattttaggatttaagtcagaattttgacaacaatg 11879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 11897052 - 11897015
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||||| | |||||||||||||||    
T  11897052 tgaattttaggatttaagtcagaattttgacaacaatg 11897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 27836442 - 27836495
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
    |||||||| | |||||||||||||||||||| | ||| |||||| |||||||||    
T  27836442 aaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaatttt 27836495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 17647029 - 17646993
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  17647029 tgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 23142317 - 23142273
Alignment:
Q  165 aatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
    |||||||||||||| ||||||||||||| |||||  |||||||||    
T  23142317 aatttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 23142273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 26574951 - 26574983
Alignment:
Q  96 gtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||||||||||| ||||||||||    
T  26574951 gtaaaatcgcaatcaaaattgaaggattttacc 26574983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 27672311 - 27672347
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatggt 241  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  27672311 attttagaatttaagtcgggattttggcaacaatggt 27672347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 27836351 - 27836395
Alignment:
Q  84 atataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||| |||| ||||||||| |||||||||| |||||||||||||    
T  27836351 atataggaaattgtaaaatcacaatcaaaatcgatggattttacc 27836395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 30240269 - 30240301
Alignment:
Q  96 gtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||||||||||||||||| ||||    
T  30240269 gtaaaatcgcaatcaaaattgatggattctacc 30240301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 9 - 131
Alignment:
Q  2 gtcgagtgagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaa 101  Q
    ||||| |||||||| ||||||||||||||||||||||| | ||||||||||| ||||||| |||||||| |||||| ||||||||||||||| |||||||    
T  9 gtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgtagaatcgatataagaaattgtaaaa 107  T
Q  102 tcgcaatcaaaattgatggatttt 125  Q
    || |||||||||| ||||||||||    
T  108 tctcaatcaaaatcgatggatttt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 7e-34; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 10143201 - 10143100
Alignment:
Q  25 acaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattt 124  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  10143201 acaatcgtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggattt 10143102  T
Q  125 ta 126  Q
    ||    
T  10143101 ta 10143100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 6346769 - 6346882
Alignment:
Q  11 gaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatca 110  Q
    ||||| ||||||||| |||||||||||| ||  |||||||||| ||||||| ||||||||||||||| |||  |||||||||| ||||||||||||||||    
T  6346769 gaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactacttttgtagaatgaatataagaaattgtaaaatcgcaatca 6346868  T
Q  111 aaattgatggattt 124  Q
    |||| |||||||||    
T  6346869 aaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 5361777 - 5361928
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| |||||| |||||||||||||| |||  |||||||||| | ||||| ||||||||||||||| |||||||||| ||||  |||||||||||||    
T  5361777 gagaagagcaaaatagacaatcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgtaaaatcgcaat 5361876  T
Q  109 caaaattgatggattttaccnnnnnnntaatactaaatatatgttacaaatg 160  Q
    |||| | ||||||||| |||        |||||||||||||||||| |||||    
T  5361877 caaagtcgatggatttgaccaaaagaaaaatactaaatatatgttaaaaatg 5361928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 17466388 - 17466278
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||||||||||||||| |||  |||||| ||| |||| || ||||||||||||||  ||||||||||||||| |||||||| ||||||||||| |    
T  17466388 caaaatcgacaatcgtaaaattgcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcg 17466289  T
Q  117 atggattttac 127  Q
    |||||||||||    
T  17466288 atggattttac 17466278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 7045057 - 7044961
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||  |||||||||| |||||||||||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttacc 7044961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 8010968 - 8011067
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||||| |||| || ||||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  8010968 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatgtattttacc 8011067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 37240556 - 37240450
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatat-aagaaaatgtaaaatcgcaa 107  Q
    ||||||| | |||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||| ||||||||| ||||||  |||||||| |||    
T  37240556 gagaagagctaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatataaagaaatcgtaaaatcacaa 37240457  T
Q  108 tcaaaat 114  Q
    |||||||    
T  37240456 tcaaaat 37240450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 36121120 - 36121021
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||| |  |||||||||| ||||||| ||||  |||||||||  ||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  36121120 tcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 36121021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 5375962 - 5375863
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||  |||| |||| |||| ||||| |||| ||||||||| |||||||||| |||||||||||||    
T  5375962 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacc 5375863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 9770409 - 9770310
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||   |||||||| ||||||||||  ||| |||||||||||||||||||| |||| ||||||||    
T  9770409 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtcttttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacc 9770310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 9911243 - 9911342
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||   |||| |||| ||||||| || |  ||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  9911243 tcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttacc 9911342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 23064793 - 23064892
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||| ||| ||||||||||||  ||||||||| |||||||||| |||| |||||||| ||||||||||| ||  |||||||||    
T  23064793 tcgtaaaatcgcaatcaaaattgaaggattttattcaaggacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgaatgattttacc 23064892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 9149569 - 9149654
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgt-aaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||| ||| ||||||| ||||||||||| ||| |||||||||||||||  || |||| |||||||||||||||| |||||||||    
T  9149569 caaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagattttacc 9149654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 24719854 - 24719773
Alignment:
Q  47 aatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||| ||||||| || | |||||||||| |||||||||||||||  ||||||||||||||||||| ||||  |||||||    
T  24719854 aatcgaaggattttactcgattacttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttacc 24719773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 10394924 - 10394824
Alignment:
Q  12 aagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaa 111  Q
    |||| ||||||| | |||||||||||||||  |||||||||| || |||| ||||||||||||||| ||||| |||| ||||  |||||||  |||||||    
T  10394924 aagagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatcaa 10394825  T
Q  112 a 112  Q
    |    
T  10394824 a 10394824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 8889526 - 8889424
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    |||||| |||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||| |||         ||| |||||||||||||||||||| |    
T  8889526 caaaattgacaattgtaaaatcgcaaccaaaatcgaaggatcttactcaactacttttgtagaat---------aaattgtaaaatcgcaatcaaaatcg 8889436  T
Q  117 atggattttacc 128  Q
    ||| ||||||||    
T  8889435 atgaattttacc 8889424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 5362056 - 5362093
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5362056 tgaattttaggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 5943073 - 5943166
Alignment:
Q  11 gaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcg 104  Q
    ||||| ||||||| | |||||||||||||||   ||||| ||| ||||||| ||||||||||||||| ||||| | |||||||  |||||||||    
T  5943073 gaagagcaaaatcaaaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaatcggtttaagaaatcgtaaaatcg 5943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 18459446 - 18459527
Alignment:
Q  12 aagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaa 93  Q
    |||| |||||||||||||||||||||||||   ||||||||| ||||| | | ||||| ||||||| ||| |||||||||||    
T  18459446 aagagcaaaatcgacaatcgtaaaatcgcaattaaaatcgaaggatttgacttaactaattttgtagaattgatataagaaa 18459527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 8931516 - 8931441
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaa 107  Q
    ||||| |||| ||||||||||| ||||||| |||||||||||  || |||| |||||||||| | |||||||||||    
T  8931516 taaaaccgcaaccaaaatcgaaggattttactcaactactttgataaaatcaatataagaaattataaaatcgcaa 8931441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 7452804 - 7452707
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||||||||  |||||||||| ||||| | ||||||||||||||| |||| ||||| ||||  |||||| | |||  ||||| ||||||||||    
T  7452804 aatcgtaaaatcgcaatcaaaatcgaaggattt-actcaactacttttgtagaatcaatatacgaaatcgtaaaagcacaactaaaatcgatggatttt 7452707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 55476285 - 55476223
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataaga 91  Q
    |||||||||||||  |||||||||| ||||||| ||||  ||||||||| |||||||||||||    
T  55476285 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataaga 55476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 7044760 - 7044728
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaa 237  Q
    |||||||||||||||||||||||||||||||||    
T  7044760 attttaggatttaagtcgggattttgacaacaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 7045259 - 7045140
Alignment:
Q  11 gaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcga--tataagaaaatgtaaaatcgcaat 108  Q
    ||||| ||||||| | |||| ||||||||||  |||||||||| ||||||| |||||| |||||  | ||||||  |||||||||  |||||||  ||||    
T  7045259 gaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaactgcttttcaagaatcgagatataagaaatcgtaaaatatcaat 7045160  T
Q  109 caaaattgatggattttacc 128  Q
    ||||||  |||||| |||||    
T  7045159 caaaatctatggatcttacc 7045140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 8743612 - 8743656
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||    
T  8743612 caaaatcgaaagattttactcaactacatttgtataatcgatata 8743656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 8889261 - 8889225
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatggt 241  Q
    ||||||||||||||||||||||||||||| |||||||    
T  8889261 attttaggatttaagtcgggattttgacatcaatggt 8889225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 37240408 - 37240357
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaatttatgaatt 207  Q
    |||||||| |||||||||||||| ||||||||||||| |||||  |||||||    
T  37240408 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaatt 37240357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 610682 - 610720
Alignment:
Q  201 atgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  610682 atgaattttagtatttaagttgggattttgacaacaatg 610720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Complemental strand, 4156797 - 4156763
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||| |||||||||||||||||||||||||||    
T  4156797 aattttaagatttaagtcgggattttgacaacaat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 4157345 - 4157269
Alignment:
Q  11 gaagaacaaaatcgacaatc---gtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcga 84  Q
    ||||| ||||||||| ||||   |||||||||||  ||| |||||| ||||||| ||||||||||||||| ||||||    
T  4157345 gaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatcga 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 4157632 - 4157556
Alignment:
Q  11 gaagaacaaaatcgacaatc---gtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcga 84  Q
    ||||| ||||||||| ||||   |||||||||||  ||| |||||| ||||||| ||||||||||||||| ||||||    
T  4157632 gaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatcga 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 9149830 - 9149864
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||||||||||||||| |||||    
T  9149830 aattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 13023599 - 13023566
Alignment:
Q  206 ttttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||| ||||||||||||||||||    
T  13023599 ttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 4157099 - 4157051
Alignment:
Q  79 aatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttac 127  Q
    |||| ||| ||||||  ||||||||||||||||||| ||||||||||||    
T  4157099 aatcaatacaagaaatcgtaaaatcgcaatcaaaatcgatggattttac 4157051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 8011309 - 8011345
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  8011309 tgaattttaggatttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 9770250 - 9770210
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||||||| ||||||    
T  9770250 tataagaaatcgtaaaatcgcaatcaaaattgatagatttt 9770210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 9911402 - 9911442
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  9911402 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9911442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 32881629 - 32881519
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||||||||||||||||||| |  |||||||| ||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||      
T  32881629 caaaatcgacaatcgtaaaatcgcaactgaaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatca 32881530  T
Q  117 atggattttac 127  Q
    |||| ||||||    
T  32881529 atggcttttac 32881519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 41032585 - 41032701
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| |||||| || ||||||||||||||| | |||||||||  |||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  41032585 gagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaat 41032684  T
Q  109 caaaattgatggatttt 125  Q
     ||||| ||||||||||    
T  41032685 taaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 17055751 - 17055850
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||||||||||||| |||||||| |||||| |||||||| ||||||||||| |||||||||||||    
T  17055751 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttacc 17055850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 47786175 - 47786056
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| |||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||||| ||| |||||||||||    ||||||| |||    
T  47786175 gagaagagcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcgaaat 47786076  T
Q  109 caaaattgatggattttacc 128  Q
     ||||| |||||||||||||    
T  47786075 aaaaatcgatggattttacc 47786056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 18304641 - 18304740
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||||||||| |||||||||| ||||||| | ||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||    
T  18304641 aatcgtaaaatcgcattcaaaatcgaaggattttactaaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttta 18304740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 23528953 - 23528854
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  23528953 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 23528854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 30619258 - 30619156
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||||||||| ||||| | ||||||||| ||||||| ||||||||||||||| ||||||||| | ||| ||||||||||||||    
T  30619258 gagaagagcaaaatcgacaatcgtaaa-tcgcaacaaaaatcgaaggattttactcaactacttttgtagaatcgatatgaaaaattgtaaaatcgcaat 30619160  T
Q  109 caaa 112  Q
    ||||    
T  30619159 caaa 30619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 21846109 - 21846205
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||||||| ||||||| ||||  ||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  21846109 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatagatgaattttacc 21846205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 16125287 - 16125379
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatgga 121  Q
    |||||||||||||  |||||||||| ||||||| ||||  || |||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  16125287 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatgga 16125379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 13100487 - 13100355
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||||||| || ||||||| ||||  || |||||| |||||||||||||||   |||||||||||||||||| |||||||||||||    
T  13100487 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaggacatttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttacc 13100388  T
Q  129 nnnnnnnt-aatactaaatatatgttacaaatg 160  Q
           | ||||||||||||||||||||||||    
T  13100387 caaaaaataaatactaaatatatgttacaaatg 13100355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 12513588 - 12513476
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||| ||||||||||||| ||||||||||| |||||||| || ||||||| |||||||||| |||       | |||||||| ||||||||||||||    
T  12513588 gagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttactcaactacttctgt-------agataagaaattgtaaaatcgcaat 12513496  T
Q  109 caaaattgatggattttacc 128  Q
    |||||| ||| |||||||||    
T  12513495 caaaatcgatagattttacc 12513476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 19009780 - 19009879
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||||||| || ||||||| ||||  ||||||||| |||||||||| |||| ||||||||||||||||||||   |||||||||||    
T  19009780 tcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatataggaaattgtaaaatcgcaatcaaaatcattggattttacc 19009879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 16434818 - 16434709
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| ||||||||||| |||  |||||||||| ||||||| || || ||||||||| ||| ||||||||| ||   ||||||||||||||||| |    
T  16434818 caaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttgtagaattgatataagataa--caaaatcgcaatcaaaatcg 16434721  T
Q  117 atggattttacc 128  Q
    ||||||| ||||    
T  16434720 atggattctacc 16434709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 9351895 - 9351994
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||| | |||||||| |||  ||||||||| |||| ||||| |||| ||||||||| |||||||||| |||| ||||||||    
T  9351895 tcgtaaaatcgcaatcaaaatcgtaggattttatccaaggacttttgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacc 9351994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 27917232 - 27917302
Alignment:
Q  57 ttttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttac 127  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||  |||||||||||||| |||| |||||||    
T  27917232 ttttactcaactacttttgtataattgatataagaaattgtattatcgcaatcaaaatcgatgaattttac 27917302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 25146588 - 25146700
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgt-aaaatcgcaatcaaaatt 115  Q
    ||||||||  |||||||||||||||  |||||||||| ||||||| ||||   |||| ||| ||||||||||  ||| | | |||||||||||||||||     
T  25146588 caaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtctttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatc 25146687  T
Q  116 gatggattttacc 128  Q
    |||||||||||||    
T  25146688 gatggattttacc 25146700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 14074330 - 14074397
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaa 111  Q
    |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||    
T  14074330 caaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaa 14074397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 17869583 - 17869681
Alignment:
Q  30 cgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||||  ||||||| || ||||||| ||||  |||||| || |||| || ||| ||| |||||||||||||||||||| |||| ||||||||    
T  17869583 cgtaaaatcgcaatcaaaatcaaaggattttactcaaggacttttatagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcgatgaattttacc 17869681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 9352159 - 9352195
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatggt 241  Q
    |||||||||||||||||||||||||||||||||||||    
T  9352159 attttaggatttaagtcgggattttgacaacaatggt 9352195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 18228533 - 18228462
Alignment:
Q  57 ttttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||| |||||| |||||||| |||||||||||||||  |||||||||||||||| || |||| || |||||    
T  18228533 ttttactcaacttcttttgtagaatcgatataagaaatcgtaaaatcgcaatcaacatcgatgaatgttacc 18228462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 9954865 - 9954963
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttac 127  Q
    |||||||||||||  |||||||||| |||||||   ||  ||||||  | |||| ||||| |||| ||||||||||||||||| || ||||||||||||    
T  9954865 tcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaagaatccatataggaaattgtaaaatcgcaatcaagatcgatggattttac 9954963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 13276140 - 13276190
Alignment:
Q  71 ttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatgga 121  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| ||||||    
T  13276140 ttttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatgga 13276190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 25146861 - 25146898
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25146861 tgaattttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 30619108 - 30619075
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||||||||||||||||||||    
T  30619108 attttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 9128685 - 9128768
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttac 127  Q
    |||||||||| ||||||| | ||  | |||||||  |||||||||  ||| ||||||||||||||||||||| ||| |||||||    
T  9128685 caaaatcgaaggattttactaaaggatttttgtaggatcgatatagaaaattgtaaaatcgcaatcaaaatttatgaattttac 9128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 9128732 - 9128767
Alignment:
Q  175 aaattgtaaaatcgcaataaaaatttatgaatttta 210  Q
    |||||||||||||||||| |||||||||||||||||    
T  9128732 aaattgtaaaatcgcaatcaaaatttatgaatttta 9128767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 9955130 - 9955165
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9955130 aattttaggatttaagttgggattttgacaacaatg 9955165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 19009919 - 19009966
Alignment:
Q  151 gttacaaatgactcaatttataagaaattgtaaaatcgcaataaaaat 198  Q
    |||| |||||||| |||||||||||||| ||||||||||||| |||||    
T  19009919 gttataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaat 19009966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 13276244 - 13276286
Alignment:
Q  156 aaatgactcaatttataagaaattgtaaaatcgcaataaaaat 198  Q
    |||||||| |||||||||||||| ||||||||||||| |||||    
T  13276244 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaat 13276286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 18304907 - 18304941
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||| ||||||||||||||||||    
T  18304907 attttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 19010039 - 19010073
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaaca 236  Q
    |||||||||||||||||||| ||||||||||||||    
T  19010039 tgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 21846364 - 21846398
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||| ||||||||||||||||||||    
T  21846364 attttaggatttaactcgggattttgacaacaatg 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 13276362 - 13276395
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    |||||||||||||| |||||||||||||||||||    
T  13276362 attttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 14074466 - 14074499
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||| ||||||||||||||||||    
T  14074466 attttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 21846162 - 21846203
Alignment:
Q  169 tataagaaattgtaaaatcgcaataaaaatttatgaatttta 210  Q
    |||||||||||||||||||||||| |||||  ||||||||||    
T  21846162 tataagaaattgtaaaatcgcaatcaaaatagatgaatttta 21846203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 47785828 - 47785791
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||| || ||||||||||||||||||    
T  47785828 tgaattttaggatttatgttgggattttgacaacaatg 47785791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 9327206 - 9327246
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  9327206 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9327246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 9955026 - 9955066
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  9955026 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9955066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 12513419 - 12513379
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  12513419 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 12513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 13100329 - 13100289
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    ||||||||| |||||||||||||||||||| ||||| ||||    
T  13100329 tataagaaattgtaaaatcgcaatcaaaatcgatggttttt 13100289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 19009937 - 19009977
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  19009937 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 19009977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 23528692 - 23528656
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  23528692 tgaattttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 32881469 - 32881425
Alignment:
Q  165 aatttataagaaattgtaaaatcgcaataaaaatttatgaatttt 209  Q
    |||||||||||||| ||||||||||||| |||||  |||||||||    
T  32881469 aatttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 32881425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 93519 - 93636
Alignment:
Q  12 aagaacaaaatcgacaa-tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatca 110  Q
    |||| |||||||||||| | ||||||||| |  |||||||||| ||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||    
T  93519 aagagcaaaatcgacaaattgtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatca 93618  T
Q  111 aaattgatggattttacc 128  Q
    |||| |||||||||||||    
T  93619 aaatcgatggattttacc 93636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 93800 - 93834
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||||||||||||||||||||    
T  93800 attttaggatttaagtcgggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 8779 - 8890
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| |||| |||||||| |  |||||||||| ||||||| ||||||||||||||| ||| ||||||||||  |||||||||||||||||||| |    
T  8779 caaaatcgaaaatcataaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcg 8878  T
Q  117 atggattttacc 128  Q
    ||||||||||||    
T  8879 atggattttacc 8890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 21058978 - 21059087
Alignment:
Q  19 aaatcgacaatcgtaaaatcgcatccaaaatcgaatgatttt-attcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattga 117  Q
    ||||||||||||||||||||||| ||||||||||| |||||| | | ||||||||||||| |||  |||||||||| | |||||||||||||||||| ||    
T  21058978 aaatcgacaatcgtaaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcga 21059077  T
Q  118 tggattttac 127  Q
    ||||||||||    
T  21059078 tggattttac 21059087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 38158101 - 38158195
Alignment:
Q  34 aaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||||| |||| || ||||||| ||||||||| ||||||||||||||||||||||||    
T  38158101 aaatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttacc 38158195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 43235162 - 43235066
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||||||| ||||||| ||||  ||||||||| ||||||||||| ||| |||||||||||||||||||| ||| |||||||||    
T  43235162 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgattgattttacc 43235066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 41688501 - 41688597
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||| ||||||||||| ||||||| | ||  ||||||||| ||||||||||  ||| |||||||||||||||||||| |||| ||||||||    
T  41688501 taaaatcgcaaccaaaatcgaaggattttacttaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttacc 41688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 18844012 - 18843913
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||| |  |||||| ||||  ||||||||| |||| ||||| |||| |||||||||||||||||||| |||||||||||||    
T  18844012 tcgtaaaatcgcaatcaaaatcggagtattttactcaaggacttttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 18843913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 27340007 - 27340117
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| |||||| ||||||||  |||||||||| ||||||| |||   ||||||||| ||| |||||||||||   |||||||||||||||||| |    
T  27340007 caaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggacttttgtagaattgatataagaaatattaaaatcgcaatcaaaatcg 27340106  T
Q  117 atggattttac 127  Q
    || ||||||||    
T  27340107 atagattttac 27340117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 43005684 - 43005790
Alignment:
Q  22 tcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatgga 121  Q
    |||| ||| |||||||||||  |||||| ||| ||||||| |||||| |||||||| |||||||||| ||||  ||||||||||||| ||||| ||||||    
T  43005684 tcgaaaattgtaaaatcgcaatcaaaattgaaagattttactcaacttcttttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatgga 43005783  T
Q  122 ttttacc 128  Q
    || ||||    
T  43005784 ttgtacc 43005790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 19579237 - 19579141
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||||||| ||||| | ||||  ||||||||| ||||| ||||  ||| |||||||||||||||||||| |||||||||||||    
T  19579237 taaaatcgcaatcaaaatcgaaggatttcactcaaggacttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttacc 19579141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 20321237 - 20321141
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||| ||| ||||||| | ||  ||||||||| |||| ||||| |||| |||||||||||||||||||| |||||||||||||    
T  20321237 taaaatcgcaatcaaaattgaaggattttactgaaggacttttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 20321141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 23172275 - 23172359
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||| ||||||||    
T  23172275 caaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacc 23172359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 18051371 - 18051460
Alignment:
Q  35 aatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattt 124  Q
    |||||||  ||||||| ||  |||||||| ||  ||||||||| |||||||||| |||| ||||||||||||| |||||| |||||||||    
T  18051371 aatcgcaatcaaaatcaaagaattttattgaaggacttttgtagaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggattt 18051460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 19042300 - 19042356
Alignment:
Q  69 acttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    ||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  19042300 acttttgtagaatcgatataggaaattgtaaaatcgcaatc-aaattgatggatttta 19042356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 24648317 - 24648216
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattga 117  Q
    |||||||| ||||||||||||| |  ||||||| || ||||||| ||||||||||||||| |||| ||||||        ||||||||||||||||| |     
T  24648317 aaaatcgaaaatcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatataa--------aaaatcgcaatcaaaatcgg 24648226  T
Q  118 tggattttac 127  Q
    ||||||||||    
T  24648225 tggattttac 24648216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 240
Target Start/End: Original strand, 22645815 - 22645850
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatgg 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  22645815 attttaggatttaagtcgggattttgacaacaatgg 22645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 18051626 - 18051660
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||||||||||||||||||||    
T  18051626 attttaggatttaagtcgggattttgacaacaatg 18051660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 20923751 - 20923718
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||||||||||||||||||||    
T  20923751 attttaggatttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 23172527 - 23172560
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaa 237  Q
    ||||||||||||||||||||||||||||||||||    
T  23172527 aattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 21059251 - 21059287
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatggt 241  Q
    |||||||||||||| ||||||||||||||||||||||    
T  21059251 attttaggatttaaatcgggattttgacaacaatggt 21059287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 43234904 - 43234868
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43234904 tgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 19377912 - 19377838
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataaga 91  Q
    ||||||||| ||||||||| |  ||  |||||||||| ||||||| ||||  ||||||||| |||||||||||||    
T  19377912 caaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataaga 19377838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 22645710 - 22645752
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggattttac 127  Q
    ||||||||| |||||||||||||||||||| |||||| |||||    
T  22645710 tataagaaattgtaaaatcgcaatcaaaatagatggaatttac 22645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 17624900 - 17624851
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgt 76  Q
    |||||||||||||||  ||||||| || ||||||| ||||||||||||||    
T  17624900 aatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgt 17624851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 30804213 - 30804172
Alignment:
Q  47 aatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    ||||||||||||||| | ||||||||||||| ||||||||||    
T  30804213 aatcgaatgattttactaaactacttttgtagaatcgatata 30804172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 38158350 - 38158383
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||||||||| ||||||||||||||    
T  38158350 attttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 26021601 - 26021537
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    |||||||| | ||||||| |||||||||| ||||  ||||||||||||||  |||||||| ||||    
T  26021601 caaaatcgtaggattttactcaactacttgtgtaacatcgatataagaaatcgtaaaatcacaat 26021537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 15588676 - 15588808
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattga 117  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||| |||| |||||  |||  |||||||||||||| | |||||||||||||||||| ||    
T  15588676 aaaatcgacaatcataaaatcgcaaccaaaatcgaaggattttactcaattacttc-gtaggatcgatataagaaattataaaatcgcaatcaaaatcga 15588774  T
Q  118 tggattttaccnnnnnnntaatactaaatatatg 151  Q
    |||||||||||       ||||||||||||||||    
T  15588775 tggattttaccaaaaaaataatactaaatatatg 15588808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 35565766 - 35565888
Alignment:
Q  9 gagaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttatt---caactacttttgtataatcgatataagaaaatgtaaaatcgc 105  Q
    ||||||| ||||||||| ||| ||||||||||| | ||||||||| |||||||||   |||||||||||||| |||||||||||||||   ||||||| |    
T  35565766 gagaagagcaaaatcgataattgtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcac 35565865  T
Q  106 aatcaaaattgatggattttacc 128  Q
    ||||||||| |||||||||||||    
T  35565866 aatcaaaatcgatggattttacc 35565888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 30433109 - 30433013
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||||||||||||||| ||||  |||||| || |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  30433109 taaaatcgcaatcaaaatcgaatgattttactcaaggacttttatagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttacc 30433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 19262148 - 19262247
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||||||| ||||  ||||||||| ||||||||||||||| |||||||||||||||||||| || ||| ||||||    
T  19262148 tcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgacggactttacc 19262247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 20064032 - 20063921
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| | |||||||||||||  ||||||||||  |||||| ||||  ||||||||| |||||||||| |||| ||||||||||||| |||||| |    
T  20064032 caaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcg 20063933  T
Q  117 atggattttacc 128  Q
    ||||||||||||    
T  20063932 atggattttacc 20063921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 13502494 - 13502604
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattga 117  Q
    |||||||| ||||||||||||| |  |||||| ||| ||| ||| ||||||| ||||||| |||| ||||||||||  ||||||||||||||||||| ||    
T  13502494 aaaatcgaaaatcgtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcga 13502593  T
Q  118 tggattttacc 128  Q
    |||||||||||    
T  13502594 tggattttacc 13502604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 27407107 - 27406993
Alignment:
Q  11 gaagaacaaaatcgacaa-tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatc 109  Q
    ||||| ||||||||| || |||||| ||||||  ||||||| ||  |||||| ||||||||||||| |||||| ||||||||||   |||||||||||||    
T  27407107 gaagagcaaaatcgaaaaatcgtaatatcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatc 27407008  T
Q  110 aaaattgatggattt 124  Q
    |||||||||||||||    
T  27407007 aaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 1405077 - 1404985
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattt 124  Q
    ||||||||||  |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||| ||||||||||| |||||||||    
T  1405077 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgatggattt 1404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 16767101 - 16766997
Alignment:
Q  11 gaagaacaaaatcgacaa-tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatc 109  Q
    ||||| ||||||||| || || ||||||||||  |||||| ||| ||||||| |||||||||||| || |||||||||||||||  ||||||||||||||    
T  16767101 gaagagcaaaatcgaaaaatcataaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatc 16767002  T
Q  110 aaaat 114  Q
    |||||    
T  16767001 aaaat 16766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 25538977 - 25539076
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||||||  || ||||||| | ||||||||||||| ||||||||||| ||| |||||||| ||||||||||| ||| |||||||||    
T  25538977 tcgtaaaatcgcaatcaaaattaaaggattttactgaactacttttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttacc 25539076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 31237808 - 31237907
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  ||| |||||| ||||||| ||||  ||||||||| ||||||||||  ||| |||||||| ||||||||||| |||||||||||||    
T  31237808 tcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttgtaaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttacc 31237907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 36430145 - 36430046
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    |||||||||||||  |||||||||| ||| ||| ||||  | ||||||| |||||||| || ||||  |||||| ||||||||||| |||||||||||||    
T  36430145 tcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcgatggattttacc 36430046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 1690566 - 1690659
Alignment:
Q  35 aatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||| |||||| |||| || |||| | ||||||||||||  ||||||||||||||   ||||||||||||||||||| |||  ||||||||    
T  1690566 aatcgcaaccaaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcgataaattttacc 1690659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 19245898 - 19245827
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    ||||||| | |||||||||||||||  ||||||| || ||||||| | ||||||||||||| ||||||||||    
T  19245898 caaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactacttttgtagaatcgatata 19245827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 29661176 - 29661093
Alignment:
Q  19 aaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaat 102  Q
    ||||||| |||||||||| ||||   ||||||||| | ||||||| |||||||||||||  ||||||||||||||  |||||||    
T  29661176 aaatcgaaaatcgtaaaaccgcaattaaaatcgaaggtttttattaaactacttttgtagtatcgatataagaaatcgtaaaat 29661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 31238073 - 31238107
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||||||||||||||||||||||    
T  31238073 attttaggatttaagtcgggattttgacaacaatg 31238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 974635 - 974576
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    |||||||||||||  |||||||||| ||||||| ||||  ||||||||| ||||||||||    
T  974635 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 1404817 - 1404782
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||| |||||||||||||||||||||||||||    
T  1404817 aattttagaatttaagtcgggattttgacaacaatg 1404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 15627689 - 15627654
Alignment:
Q  204 aattttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15627689 aattttaggatttaagtcgggattttgacaataatg 15627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 20063747 - 20063713
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||| ||||||||||||||||||||||||||    
T  20063747 attttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 23863417 - 23863451
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    ||||||| |||||||||||||||||||||||||||    
T  23863417 attttagaatttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 19245189 - 19245152
Alignment:
Q  202 tgaattttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||  |||||||||||||||||||||||||||    
T  19245189 tgaattttaaaatttaagtcgggattttgacaacaatg 19245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 34167598 - 34167541
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgc-atccaaaatcgaatgattttattcaactacttt 73  Q
    ||||||||| |||||||||||||| ||| || |||||||||||||| |||| ||||||    
T  34167598 caaaatcgaaaatcgtaaaatcgcaatctaacatcgaatgattttactcaattacttt 34167541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 8428516 - 8428440
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaat 108  Q
    ||||||||||  |||||||||| ||||||  ||||||| ||||||| |||| |||| | |||  |||||||||||||    
T  8428516 taaaatcgcaatcaaaatcgaaggattttgctcaactatttttgtagaatcaatatcaaaaatcgtaaaatcgcaat 8428440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 20034042 - 20034110
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgat 85  Q
    ||||||||| | |||||||||||||  |||||| ||| ||||||| ||||  ||||||||| |||||||    
T  20034042 caaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtagaatcgat 20034110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 21869156 - 21869212
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatata 88  Q
    ||||||||||   ||||||||| ||||||||||||  ||||||||| ||||||||||    
T  21869156 taaaatcgcaattaaaatcgaaggattttattcaatgacttttgtagaatcgatata 21869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 27523928 - 27523984
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgat 85  Q
    |||||||||||||  |||||||||| ||||||| ||||  ||||||||| |||||||    
T  27523928 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 27523984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 31237968 - 31238008
Alignment:
Q  85 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 125  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  31237968 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 31238008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 8752 - 8607
Alignment:
Q  15 aacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaat 114  Q
    ||||||||||  | |||||||||||||  |||||| ||| ||||||| |||| || ||| ||| |||||||||| |||| ||||||||||||||||||||    
T  8752 aacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtattttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaat 8653  T
Q  115 tgatggattttaccnnnnnnntaatactaaatatatgttacaaatg 160  Q
     |||||||||||||       |||||||||||||||| || |||||    
T  8652 cgatggattttaccaaaaaaataatactaaatatatggtataaatg 8607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 8476 - 8442
Alignment:
Q  205 attttaggatttaagtcgggattttgacaacaatg 239  Q
    |||||||||||||||| ||||||||||||||||||    
T  8476 attttaggatttaagtagggattttgacaacaatg 8442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 56260 - 56356
Alignment:
Q  32 taaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 128  Q
    ||||||||||  |||||||||| ||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  56260 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 56356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 985 - 885
Alignment:
Q  11 gaagaacaaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatca 110  Q
    ||||| |||||| || ||||||||||| |||  ||||||||||  |||||| ||||||||||||||| ||  ||||||||||| ||||||||||||||||    
T  985 gaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgcaatca 886  T
Q  111 a 111  Q
    |    
T  885 a 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 7275 - 7386
Alignment:
Q  17 caaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattg 116  Q
    ||||||||| | | ||||||||| |  |||||||||| ||||||| |||| |||||||||  ||| |||||| |||| |||| ||||||||||||||| |    
T  7275 caaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatcaaaatcg 7374  T
Q  117 atggattttacc 128  Q
    ||| ||||||||    
T  7375 atgaattttacc 7386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 33246 - 33131
Alignment:
Q  18 aaaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataaga-----aaatgtaaaatcgcaatcaaa 112  Q
    |||||||| ||| |||||||||||  ||||||||||  |||||| |||  |||||||||| |||||||||||||     |||| ||||||||||||||||    
T  33246 aaaatcgaaaattgtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgatataagatagcgaaatctaaaatcgcaatcaaa 33147  T
Q  113 attgatggattttacc 128  Q
    || ||| |||| ||||    
T  33146 atcgattgattctacc 33131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 61144 - 61243
Alignment:
Q  27 aatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||||| ||  ||||||||||  |||||| | ||||||||||||| |||||||||| ||||  ||||||||| || |||||| |||||| ||||    
T  61144 aatcgtaaaatcacaatcaaaatcgaagaattttacttaactacttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatggacttta 61243  T

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Target: scaffold0048; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 48509 - 48591
Alignment:
Q  44 caaaatcgaatgattttattcaactacttttgtataatcgatataagaaaatgtaaaatcgcaatcaaaattgatggatttta 126  Q
    |||||||||| ||||||| | ||||||||||||| |||||||| |||||   |||||||||| |||||||| |||||| ||||    
T  48509 caaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggacttta 48591  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 145895 - 145781
Alignment:
Q  19 aaatcgacaatcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgatataag-----aaaatgtaaaatcgcaatcaaaa 113  Q
    ||||||| ||||||||||| |||  |||||||||| ||||||| |||  |||||||||| ||||||||||||     ||||| |||||| ||||||||||    
T  145895 aaatcgaaaatcgtaaaatagcaatcaaaatcgaaggattttactcacttacttttgtagaatcgatataagatagcaaaatctaaaattgcaatcaaaa 145796  T
Q  114 ttgatggattttacc 128  Q
    | ||| |||| ||||    
T  145795 tcgattgattctacc 145781  T

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Target: scaffold0079 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 14758 - 14814
Alignment:
Q  29 tcgtaaaatcgcatccaaaatcgaatgattttattcaactacttttgtataatcgat 85  Q
    |||||||||||||  |||||||||| ||||||||||||  ||||||||| |||||||    
T  14758 tcgtaaaatcgcaatcaaaatcgaaggattttattcaaagacttttgtagaatcgat 14814  T

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Target: scaffold0115 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 35149 - 35188
Alignment:
Q  199 ttatgaattttaggatttaagtcgggattttgacaacaat 238  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  35149 ttatgaattttagaatttaagtcgagattttgacaacaat 35188  T

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