View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16912_low_71 (Length: 240)
Name: NF16912_low_71
Description: NF16912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16912_low_71 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 19641265 - 19641485
Alignment:
| Q |
1 |
tgaagaaaacaatgtctgtttatgattcctttgcagtgggatgatgtaactccgaaaccaacattatctgttagcttgggtcagaactcaggtgtacaca |
100 |
Q |
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| T |
19641265 |
tgaagaaaacaatgtctgtttatgattcctttgcagtcagatgatgtaactccgaaaccaacattatctgttagcttgggtcagaactcaggtctacaca |
19641364 |
T |
|
| Q |
101 |
tgatatcccgcagtgagcagattccccgccgttcaaagcgtcttgctggaattaaggcagatcaacttaaaacaactcgagcgaatcaagatgtggttaa |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19641365 |
tgatatcctgcagtgagcagattccccgccgttcaaagcgtcttgctggaattaaggcagatcaacttaaaacaactcgagcgaatcaagatgtggttaa |
19641464 |
T |
|
| Q |
201 |
acaatcgggcgaggacaaaac |
221 |
Q |
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|||||||||||||| |||||| |
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| T |
19641465 |
acaatcgggcgagggcaaaac |
19641485 |
T |
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