View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16912_low_87 (Length: 219)
Name: NF16912_low_87
Description: NF16912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16912_low_87 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 37117182 - 37116998
Alignment:
| Q |
20 |
tcttcaattcacaaattaattactgattttagtaagatattcaagatgatacataatagtattcgaatttagaagatcacaattaaccgtaacactaaag |
119 |
Q |
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| T |
37117182 |
tcttcaattcacaaattaattactgattttagtaagatattcaagatgatacataatagtattcgaatttagaagatcacaattaaccgtaacactaaag |
37117083 |
T |
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| Q |
120 |
ttggaaattaaacaattcacaaattatactcacagttttgatcttattcttcttcacccaatctacaaaaacgtttgaaccatct |
204 |
Q |
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| T |
37117082 |
ttggaaattaaacaattcacaaattatactcacagttttgatcttattcttcttcacccaatctacaaaaacgtttgaaccatct |
37116998 |
T |
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