View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16914_high_2 (Length: 307)
Name: NF16914_high_2
Description: NF16914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16914_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 18 - 302
Target Start/End: Original strand, 3337840 - 3338124
Alignment:
| Q |
18 |
tgttttatatgcggtacttttcatgcgtgctaaattattcaatattctttgaatggcaaactagggctcaacaaacttgaagagaaattcaatatataat |
117 |
Q |
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| T |
3337840 |
tgttttatatgcggtacttttcatgcgtgctaaattattcaatattctttgaatggcaaactagggctcaacaaacttgaagagaaattcaatatataat |
3337939 |
T |
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| Q |
118 |
agggataacatgataaacaagttatttattaatcacaggtgcctaattgacttgttataattgagacgatgaagtgttgatatttgttggtgaggtttgg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3337940 |
agggataacatgataaacaagttatttattaatcacaggtgcctaattgacttgttataattgagacgatgaagtgttgatatttgttggtgaggtttgg |
3338039 |
T |
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| Q |
218 |
tgcatataatggatggagaaagaaagagtacagagtgtagttaagttggcatggggttgaccgcataatccagatctgtgctgct |
302 |
Q |
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| T |
3338040 |
tgcatataatggatggagaaagaaagagtacagagtgtagttaagttggcatggggttgaccgcataatccagatcagtgttgct |
3338124 |
T |
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