View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16914_low_6 (Length: 268)
Name: NF16914_low_6
Description: NF16914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16914_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 43763874 - 43763642
Alignment:
| Q |
20 |
ttcaagttcatctccttcaaattcatctattgatttggatttagctggacctgaatactcactgctaatttcctccacacgctcacctcctattgtactc |
119 |
Q |
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| T |
43763874 |
ttcaagttcatctccttcatattcatctattgatttggatttagctggacctgaatactcactgctaatttcctccacacgctcacctcctattgtactc |
43763775 |
T |
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| Q |
120 |
ccttcctccccttcttccacctccatgttactaatactccctccttcaccgtccgccgccgcaccgctaccatgccgaaaaatccccgcctgatttgagc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |
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| T |
43763774 |
ccttcctccccttcttccacctccatgttactaatactccctccttcaccctccgccgccgcaccgccaccatgccgaaatatccccgcctgatttgagc |
43763675 |
T |
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| Q |
220 |
aaagaaaatatgttagaacttaagtctaggaag |
252 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
43763674 |
aaagaaaatatgttagaacttaagtctaggaag |
43763642 |
T |
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