View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16916_low_7 (Length: 363)

Name: NF16916_low_7
Description: NF16916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16916_low_7
NF16916_low_7
[»] chr4 (81 HSPs)
chr4 (1-243)||(32339592-32339834)
chr4 (125-243)||(37042671-37042789)
chr4 (121-211)||(40018228-40018318)
chr4 (132-243)||(22420724-22420835)
chr4 (125-211)||(38903757-38903843)
chr4 (142-239)||(40932935-40933032)
chr4 (125-210)||(47147530-47147613)
chr4 (145-243)||(49686870-49686968)
chr4 (96-239)||(31339651-31339795)
chr4 (144-232)||(47372827-47372915)
chr4 (123-243)||(49738557-49738677)
chr4 (128-243)||(41192221-41192336)
chr4 (125-243)||(25755473-25755591)
chr4 (125-243)||(26024857-26024975)
chr4 (118-242)||(934439-934563)
chr4 (148-211)||(29801559-29801622)
chr4 (125-236)||(42639034-42639145)
chr4 (127-213)||(6843774-6843860)
chr4 (121-255)||(31403029-31403163)
chr4 (126-243)||(25574982-25575099)
chr4 (146-243)||(29209182-29209279)
chr4 (125-210)||(44686611-44686695)
chr4 (142-243)||(54470381-54470482)
chr4 (175-243)||(45209212-45209280)
chr4 (125-243)||(2557678-2557797)
chr4 (177-252)||(27450178-27450253)
chr4 (148-243)||(44719368-44719463)
chr4 (128-243)||(55388218-55388333)
chr4 (125-211)||(7681949-7682035)
chr4 (171-253)||(8284342-8284424)
chr4 (125-211)||(18966762-18966848)
chr4 (129-243)||(55007907-55008021)
chr4 (170-243)||(6957800-6957873)
chr4 (132-241)||(20105527-20105636)
chr4 (125-210)||(44667286-44667370)
chr4 (175-243)||(3979127-3979195)
chr4 (175-243)||(31959821-31959889)
chr4 (175-243)||(52569522-52569590)
chr4 (125-183)||(21879220-21879279)
chr4 (125-211)||(30853500-30853586)
chr4 (177-243)||(34585691-34585757)
chr4 (125-207)||(51841241-51841323)
chr4 (142-243)||(2589246-2589347)
chr4 (125-234)||(8598957-8599066)
chr4 (121-242)||(39761336-39761457)
chr4 (178-243)||(43434134-43434199)
chr4 (125-174)||(45569085-45569134)
chr4 (142-203)||(48154894-48154955)
chr4 (142-203)||(55028995-55029056)
chr4 (175-243)||(436436-436504)
chr4 (175-243)||(1777024-1777092)
chr4 (175-243)||(19061942-19062010)
chr4 (22-110)||(33709966-33710054)
chr4 (143-243)||(34208276-34208376)
chr4 (175-243)||(48622550-48622618)
chr4 (175-238)||(4441060-4441123)
chr4 (23-106)||(31961422-31961505)
chr4 (175-242)||(35690478-35690545)
chr4 (197-240)||(38017318-38017361)
chr4 (188-243)||(50238622-50238677)
chr4 (188-243)||(50238708-50238763)
chr4 (149-211)||(7970420-7970482)
chr4 (177-243)||(13262421-13262487)
chr4 (125-211)||(20999157-20999243)
chr4 (173-243)||(21237063-21237133)
chr4 (120-182)||(29182604-29182666)
chr4 (154-244)||(39708619-39708709)
chr4 (125-183)||(42293332-42293390)
chr4 (130-243)||(44047377-44047491)
chr4 (177-243)||(49939741-49939807)
chr4 (125-243)||(53540447-53540565)
chr4 (142-243)||(35555657-35555758)
chr4 (198-243)||(43971387-43971432)
chr4 (179-252)||(47372915-47372988)
chr4 (175-243)||(19969388-19969456)
chr4 (125-181)||(20047592-20047648)
chr4 (125-181)||(26024988-26025044)
chr4 (175-243)||(33227416-33227484)
chr4 (175-243)||(46582833-46582900)
chr4 (175-243)||(51421937-51422005)
chr4 (175-207)||(56200153-56200185)
[»] chr2 (67 HSPs)
chr2 (125-243)||(8197548-8197666)
chr2 (125-243)||(8202308-8202426)
chr2 (125-242)||(3305817-3305934)
chr2 (125-243)||(19234991-19235109)
chr2 (125-243)||(33504380-33504499)
chr2 (125-243)||(19336900-19337018)
chr2 (125-243)||(38435109-38435227)
chr2 (125-237)||(37470146-37470258)
chr2 (125-207)||(2906036-2906118)
chr2 (125-243)||(9556376-9556494)
chr2 (142-240)||(32402674-32402772)
chr2 (125-243)||(42092674-42092792)
chr2 (101-242)||(13240771-13240912)
chr2 (125-242)||(19024335-19024452)
chr2 (118-243)||(37481624-37481749)
chr2 (125-243)||(9496023-9496141)
chr2 (125-243)||(28960218-28960336)
chr2 (125-243)||(33287578-33287696)
chr2 (125-211)||(43832255-43832341)
chr2 (175-252)||(12474925-12475002)
chr2 (125-242)||(26670925-26671042)
chr2 (161-234)||(29159286-29159359)
chr2 (175-243)||(227396-227464)
chr2 (125-233)||(1626352-1626460)
chr2 (175-243)||(7326167-7326235)
chr2 (175-243)||(28508885-28508953)
chr2 (175-243)||(30306239-30306307)
chr2 (125-193)||(31254445-31254513)
chr2 (143-234)||(15836115-15836206)
chr2 (22-105)||(43260446-43260529)
chr2 (148-210)||(1303468-1303530)
chr2 (177-243)||(3635330-3635396)
chr2 (125-243)||(12882052-12882170)
chr2 (177-243)||(15025703-15025769)
chr2 (125-191)||(33625257-33625323)
chr2 (177-243)||(41197234-41197300)
chr2 (125-195)||(42149715-42149785)
chr2 (149-243)||(43573137-43573231)
chr2 (178-243)||(4807805-4807870)
chr2 (154-243)||(12734886-12734975)
chr2 (154-243)||(25834864-25834953)
chr2 (129-182)||(41779178-41779231)
chr2 (175-243)||(451655-451723)
chr2 (175-243)||(3243660-3243728)
chr2 (175-243)||(9531607-9531675)
chr2 (168-243)||(10516756-10516831)
chr2 (148-211)||(3481334-3481397)
chr2 (177-244)||(4598568-4598635)
chr2 (178-217)||(6841484-6841523)
chr2 (188-243)||(17670688-17670743)
chr2 (125-208)||(23915735-23915818)
chr2 (125-240)||(26784350-26784465)
chr2 (176-243)||(38328377-38328444)
chr2 (118-236)||(6230278-6230396)
chr2 (125-211)||(12141701-12141787)
chr2 (125-243)||(12489809-12489927)
chr2 (125-243)||(44437728-44437846)
chr2 (125-211)||(8491276-8491364)
chr2 (125-174)||(12026081-12026130)
chr2 (80-195)||(2377164-2377280)
chr2 (143-243)||(6219140-6219240)
chr2 (175-243)||(12520069-12520137)
chr2 (143-211)||(19015914-19015982)
chr2 (125-253)||(19855619-19855747)
chr2 (175-243)||(35755252-35755320)
chr2 (177-241)||(38430093-38430157)
chr2 (191-243)||(41763050-41763102)
[»] chr1 (78 HSPs)
chr1 (22-250)||(38868924-38869164)
chr1 (146-261)||(38877332-38877447)
chr1 (3-211)||(5338747-5338956)
chr1 (142-243)||(6025779-6025880)
chr1 (9-210)||(13827620-13827823)
chr1 (144-243)||(30396736-30396835)
chr1 (124-239)||(50636237-50636352)
chr1 (120-243)||(4590539-4590662)
chr1 (40-240)||(33560868-33561080)
chr1 (101-242)||(109002-109143)
chr1 (125-243)||(8796366-8796484)
chr1 (157-243)||(49377490-49377576)
chr1 (125-210)||(15577575-15577660)
chr1 (129-242)||(42501269-42501382)
chr1 (142-239)||(52073059-52073156)
chr1 (125-241)||(3818865-3818981)
chr1 (22-243)||(10569078-10569307)
chr1 (142-213)||(40920566-40920637)
chr1 (125-233)||(16822038-16822145)
chr1 (143-243)||(41560404-41560504)
chr1 (120-179)||(10584968-10585027)
chr1 (168-243)||(16943355-16943430)
chr1 (96-211)||(17233810-17233925)
chr1 (122-210)||(37591148-37591234)
chr1 (125-244)||(43934336-43934455)
chr1 (175-257)||(52921287-52921369)
chr1 (125-210)||(853825-853910)
chr1 (154-243)||(25979238-25979327)
chr1 (294-363)||(38877230-38877299)
chr1 (79-192)||(52160301-52160419)
chr1 (175-243)||(1210952-1211020)
chr1 (143-243)||(6084150-6084250)
chr1 (125-243)||(17815636-17815751)
chr1 (143-243)||(27072494-27072594)
chr1 (175-243)||(29577459-29577527)
chr1 (175-243)||(30202137-30202205)
chr1 (167-211)||(39525964-39526008)
chr1 (175-243)||(40568417-40568485)
chr1 (40-243)||(43375605-43375809)
chr1 (175-243)||(49347400-49347468)
chr1 (175-243)||(51602263-51602331)
chr1 (120-243)||(17640074-17640197)
chr1 (142-201)||(52482431-52482490)
chr1 (125-211)||(7124298-7124384)
chr1 (125-211)||(8203173-8203259)
chr1 (120-210)||(30017092-30017182)
chr1 (175-253)||(42337763-42337841)
chr1 (154-243)||(15086108-15086197)
chr1 (194-243)||(52814301-52814350)
chr1 (175-243)||(28090701-28090769)
chr1 (175-243)||(34792356-34792424)
chr1 (179-243)||(37462883-37462947)
chr1 (151-243)||(38807678-38807770)
chr1 (179-239)||(39797212-39797272)
chr1 (175-243)||(44941783-44941851)
chr1 (157-204)||(2545145-2545192)
chr1 (125-203)||(12135864-12135943)
chr1 (127-174)||(12231524-12231571)
chr1 (177-252)||(21769709-21769784)
chr1 (158-233)||(22319856-22319931)
chr1 (125-192)||(40416528-40416595)
chr1 (142-234)||(48861391-48861485)
chr1 (125-211)||(9599433-9599519)
chr1 (125-211)||(28528512-28528598)
chr1 (177-243)||(37311762-37311828)
chr1 (125-211)||(39515907-39515993)
chr1 (125-243)||(52532623-52532741)
chr1 (22-131)||(2544641-2544749)
chr1 (186-243)||(2914130-2914187)
chr1 (170-243)||(24020274-24020347)
chr1 (186-243)||(37430427-37430484)
chr1 (186-243)||(41165500-41165557)
chr1 (175-243)||(9592941-9593009)
chr1 (143-239)||(19908046-19908142)
chr1 (175-243)||(22090303-22090371)
chr1 (175-243)||(28533674-28533742)
chr1 (143-243)||(34444531-34444631)
chr1 (175-243)||(52292246-52292314)
[»] chr3 (63 HSPs)
chr3 (125-243)||(46431686-46431804)
chr3 (125-243)||(21427591-21427707)
chr3 (125-207)||(37228239-37228321)
chr3 (125-242)||(43308719-43308836)
chr3 (125-213)||(37598207-37598295)
chr3 (29-211)||(36304027-36304209)
chr3 (142-243)||(46367394-46367495)
chr3 (131-208)||(55244441-55244518)
chr3 (125-255)||(29475843-29475973)
chr3 (125-207)||(37228085-37228167)
chr3 (146-243)||(659703-659800)
chr3 (125-257)||(2340710-2340842)
chr3 (144-243)||(41971278-41971376)
chr3 (121-244)||(29337573-29337698)
chr3 (81-210)||(39535440-39535570)
chr3 (125-213)||(23534607-23534695)
chr3 (125-243)||(27893246-27893364)
chr3 (125-211)||(49841773-49841859)
chr3 (125-210)||(41425378-41425463)
chr3 (143-211)||(11284163-11284231)
chr3 (175-243)||(12096712-12096780)
chr3 (120-240)||(19758039-19758158)
chr3 (144-212)||(32052433-32052501)
chr3 (175-243)||(47555339-47555407)
chr3 (157-208)||(5852346-5852397)
chr3 (177-243)||(5169041-5169107)
chr3 (125-243)||(45289098-45289216)
chr3 (154-243)||(48508421-48508510)
chr3 (186-243)||(49503575-49503632)
chr3 (155-243)||(311316-311404)
chr3 (143-243)||(388269-388369)
chr3 (175-243)||(2133619-2133687)
chr3 (142-243)||(6988075-6988177)
chr3 (175-243)||(7895887-7895955)
chr3 (178-238)||(7942864-7942924)
chr3 (118-209)||(21200698-21200787)
chr3 (177-253)||(31566158-31566234)
chr3 (82-208)||(47789003-47789135)
chr3 (125-193)||(47804720-47804788)
chr3 (175-243)||(54128586-54128654)
chr3 (157-252)||(7278653-7278748)
chr3 (148-239)||(21862752-21862843)
chr3 (40-99)||(33307188-33307247)
chr3 (188-243)||(45834607-45834662)
chr3 (124-211)||(50237673-50237760)
chr3 (125-195)||(8476067-8476137)
chr3 (177-243)||(25191586-25191652)
chr3 (125-203)||(34719127-34719205)
chr3 (185-243)||(45468792-45468850)
chr3 (177-243)||(53262350-53262416)
chr3 (142-243)||(32170579-32170680)
chr3 (125-174)||(41452816-41452865)
chr3 (142-243)||(46140581-46140682)
chr3 (175-243)||(48532164-48532233)
chr3 (154-243)||(52156091-52156180)
chr3 (149-253)||(40106617-40106721)
chr3 (121-213)||(41842560-41842652)
chr3 (147-195)||(42026591-42026639)
chr3 (175-243)||(46148235-46148303)
chr3 (177-253)||(47233593-47233669)
chr3 (143-243)||(50960644-50960744)
chr3 (175-243)||(52139007-52139075)
chr3 (184-252)||(52882660-52882728)
[»] scaffold0180 (1 HSPs)
scaffold0180 (120-243)||(25450-25574)
[»] chr6 (33 HSPs)
chr6 (22-250)||(6293392-6293626)
chr6 (118-250)||(1747946-1748077)
chr6 (125-204)||(33997590-33997669)
chr6 (125-243)||(34512-34630)
chr6 (129-243)||(7150318-7150432)
chr6 (177-243)||(30789081-30789147)
chr6 (175-243)||(34143772-34143840)
chr6 (175-243)||(34156388-34156456)
chr6 (156-243)||(4245879-4245966)
chr6 (149-252)||(5096015-5096118)
chr6 (175-250)||(31819038-31819113)
chr6 (148-211)||(32945428-32945491)
chr6 (146-204)||(3963967-3964025)
chr6 (143-253)||(9706945-9707055)
chr6 (148-210)||(26676373-26676435)
chr6 (148-210)||(26677553-26677615)
chr6 (142-211)||(3210547-3210616)
chr6 (175-243)||(12890782-12890850)
chr6 (175-243)||(28085583-28085651)
chr6 (175-243)||(34934837-34934905)
chr6 (125-193)||(35199680-35199747)
chr6 (61-128)||(1747775-1747842)
chr6 (142-201)||(32515390-32515449)
chr6 (177-243)||(608370-608436)
chr6 (121-211)||(7267424-7267514)
chr6 (85-171)||(9749315-9749401)
chr6 (173-207)||(12237861-12237895)
chr6 (182-243)||(579632-579693)
chr6 (142-179)||(1747712-1747749)
chr6 (127-211)||(6906866-6906951)
chr6 (175-240)||(32756128-32756193)
chr6 (167-239)||(5897656-5897728)
chr6 (27-127)||(21870200-21870300)
[»] chr8 (54 HSPs)
chr8 (142-252)||(12611671-12611781)
chr8 (125-234)||(3645243-3645352)
chr8 (142-243)||(26055595-26055696)
chr8 (125-243)||(39967506-39967624)
chr8 (125-210)||(23023382-23023467)
chr8 (81-181)||(38689769-38689869)
chr8 (126-238)||(39760447-39760558)
chr8 (125-192)||(10108970-10109037)
chr8 (129-211)||(25117446-25117528)
chr8 (125-242)||(39388940-39389060)
chr8 (125-210)||(79184-79269)
chr8 (126-243)||(12692247-12692364)
chr8 (118-239)||(23492184-23492305)
chr8 (142-210)||(37826461-37826529)
chr8 (121-184)||(10079973-10080036)
chr8 (144-239)||(16715449-16715544)
chr8 (125-207)||(11733904-11733986)
chr8 (125-179)||(38178331-38178385)
chr8 (143-239)||(490510-490606)
chr8 (175-243)||(11523730-11523798)
chr8 (143-243)||(29520824-29520924)
chr8 (143-242)||(21425221-21425320)
chr8 (125-208)||(27037792-27037875)
chr8 (177-243)||(14742089-14742155)
chr8 (145-243)||(30198273-30198371)
chr8 (178-243)||(1928594-1928659)
chr8 (146-211)||(30748641-30748706)
chr8 (175-243)||(12491145-12491213)
chr8 (175-243)||(25473410-25473478)
chr8 (175-243)||(36545356-36545424)
chr8 (125-209)||(38391934-38392018)
chr8 (178-250)||(43733416-43733488)
chr8 (143-211)||(43904704-43904772)
chr8 (175-243)||(44529432-44529500)
chr8 (175-243)||(45419442-45419510)
chr8 (40-131)||(5908706-5908797)
chr8 (120-239)||(6483447-6483566)
chr8 (125-195)||(16705904-16705975)
chr8 (143-242)||(16917358-16917456)
chr8 (160-243)||(18473979-18474062)
chr8 (176-243)||(32276893-32276960)
chr8 (127-170)||(33666650-33666693)
chr8 (148-243)||(35362657-35362752)
chr8 (40-131)||(35914732-35914823)
chr8 (131-202)||(44175275-44175346)
chr8 (125-211)||(17491693-17491779)
chr8 (154-243)||(39051328-39051417)
chr8 (22-191)||(41971849-41972018)
chr8 (175-243)||(1313771-1313839)
chr8 (142-210)||(1549431-1549499)
chr8 (175-239)||(3464182-3464246)
chr8 (125-209)||(4011240-4011324)
chr8 (22-130)||(29700318-29700426)
chr8 (175-243)||(36565248-36565316)
[»] chr7 (65 HSPs)
chr7 (125-243)||(12966173-12966291)
chr7 (125-243)||(41483644-41483762)
chr7 (142-242)||(30914510-30914610)
chr7 (125-211)||(40138987-40139073)
chr7 (125-210)||(19262498-19262583)
chr7 (146-211)||(40008470-40008535)
chr7 (67-243)||(27893570-27893746)
chr7 (92-243)||(36101784-36101935)
chr7 (125-243)||(28627940-28628058)
chr7 (129-239)||(36245267-36245376)
chr7 (166-243)||(475974-476050)
chr7 (143-243)||(7220931-7221031)
chr7 (188-243)||(31840450-31840505)
chr7 (125-243)||(45601633-45601751)
chr7 (125-211)||(22174157-22174243)
chr7 (173-239)||(22349825-22349891)
chr7 (125-211)||(24549728-24549813)
chr7 (125-211)||(36239835-36239921)
chr7 (177-243)||(38607201-38607267)
chr7 (154-211)||(6807390-6807447)
chr7 (120-252)||(28541941-28542074)
chr7 (123-184)||(41578189-41578250)
chr7 (175-243)||(6375075-6375143)
chr7 (175-243)||(11594167-11594235)
chr7 (175-243)||(12841282-12841350)
chr7 (175-243)||(21078124-21078192)
chr7 (175-243)||(28208335-28208403)
chr7 (175-243)||(31682609-31682677)
chr7 (175-243)||(34869627-34869695)
chr7 (175-243)||(35906208-35906276)
chr7 (175-243)||(39906379-39906447)
chr7 (126-213)||(1569174-1569261)
chr7 (175-250)||(36652199-36652274)
chr7 (154-253)||(40979925-40980024)
chr7 (128-198)||(9797758-9797828)
chr7 (125-211)||(40830359-40830444)
chr7 (40-109)||(30144835-30144904)
chr7 (154-243)||(45836489-45836578)
chr7 (175-243)||(24777168-24777236)
chr7 (179-243)||(28021146-28021210)
chr7 (125-177)||(29653619-29653671)
chr7 (143-243)||(34035161-34035261)
chr7 (175-243)||(37618152-37618220)
chr7 (175-243)||(40149020-40149088)
chr7 (175-242)||(4604754-4604821)
chr7 (22-160)||(25579178-25579317)
chr7 (125-184)||(28858202-28858261)
chr7 (188-243)||(33073149-33073204)
chr7 (188-243)||(48919332-48919387)
chr7 (161-199)||(15311113-15311151)
chr7 (129-179)||(25826553-25826603)
chr7 (177-243)||(29650593-29650659)
chr7 (125-171)||(30144932-30144978)
chr7 (177-243)||(31869109-31869175)
chr7 (131-252)||(33731997-33732116)
chr7 (128-210)||(42177058-42177140)
chr7 (177-243)||(43281883-43281949)
chr7 (22-99)||(5335962-5336039)
chr7 (186-243)||(28708599-28708656)
chr7 (146-243)||(29013162-29013259)
chr7 (22-131)||(47848716-47848825)
chr7 (175-243)||(2885729-2885797)
chr7 (127-211)||(5336077-5336161)
chr7 (187-243)||(5418293-5418349)
chr7 (175-243)||(27648987-27649055)
[»] chr5 (61 HSPs)
chr5 (120-212)||(28005687-28005783)
chr5 (125-254)||(28186778-28186900)
chr5 (154-243)||(30639306-30639395)
chr5 (154-241)||(15588399-15588486)
chr5 (125-243)||(12576867-12576985)
chr5 (125-243)||(27998598-27998716)
chr5 (146-244)||(41808100-41808198)
chr5 (125-243)||(43475396-43475514)
chr5 (142-243)||(36123189-36123290)
chr5 (143-211)||(18350941-18351009)
chr5 (125-243)||(38684637-38684755)
chr5 (154-243)||(2645176-2645265)
chr5 (125-238)||(9235204-9235316)
chr5 (170-239)||(20456975-20457044)
chr5 (154-243)||(38685153-38685242)
chr5 (175-243)||(29816589-29816657)
chr5 (175-243)||(30213782-30213850)
chr5 (175-242)||(2915504-2915571)
chr5 (177-243)||(11002428-11002494)
chr5 (125-203)||(14749464-14749542)
chr5 (22-131)||(2712986-2713095)
chr5 (142-243)||(3442878-3442979)
chr5 (143-243)||(11675704-11675805)
chr5 (142-211)||(39128236-39128305)
chr5 (179-243)||(408501-408565)
chr5 (125-209)||(2066154-2066238)
chr5 (127-175)||(4460366-4460414)
chr5 (175-243)||(4496591-4496659)
chr5 (143-243)||(5303619-5303722)
chr5 (175-243)||(10639509-10639577)
chr5 (175-243)||(12492391-12492459)
chr5 (175-243)||(28276445-28276513)
chr5 (175-243)||(28976866-28976934)
chr5 (175-243)||(38132543-38132611)
chr5 (168-236)||(41200360-41200428)
chr5 (175-243)||(42576217-42576285)
chr5 (132-243)||(14667935-14668046)
chr5 (40-131)||(14749367-14749458)
chr5 (120-187)||(27249358-27249425)
chr5 (22-133)||(31636049-31636160)
chr5 (177-243)||(3302053-3302119)
chr5 (125-239)||(13141710-13141824)
chr5 (177-239)||(13561397-13561459)
chr5 (146-244)||(15252750-15252848)
chr5 (190-252)||(16347378-16347440)
chr5 (177-243)||(28411885-28411951)
chr5 (131-233)||(30588610-30588712)
chr5 (120-170)||(39322146-39322196)
chr5 (178-243)||(2713146-2713211)
chr5 (22-131)||(21952399-21952508)
chr5 (40-89)||(38684540-38684589)
chr5 (143-211)||(418073-418141)
chr5 (175-239)||(2075484-2075548)
chr5 (175-243)||(5558348-5558416)
chr5 (175-239)||(5860041-5860105)
chr5 (118-174)||(9917526-9917582)
chr5 (41-133)||(9917579-9917671)
chr5 (143-211)||(14911347-14911415)
chr5 (125-243)||(16706340-16706455)
chr5 (140-176)||(22576181-22576217)
chr5 (178-234)||(32442141-32442197)
[»] scaffold0373 (1 HSPs)
scaffold0373 (127-213)||(2338-2424)
[»] scaffold0041 (1 HSPs)
scaffold0041 (177-254)||(16787-16864)
[»] scaffold0168 (1 HSPs)
scaffold0168 (175-243)||(28896-28964)
[»] scaffold0392 (1 HSPs)
scaffold0392 (158-240)||(6782-6864)
[»] scaffold1318 (1 HSPs)
scaffold1318 (175-239)||(538-602)
[»] scaffold0050 (1 HSPs)
scaffold0050 (165-238)||(58238-58311)
[»] scaffold0024 (2 HSPs)
scaffold0024 (154-243)||(82904-82993)
scaffold0024 (175-243)||(48123-48191)
[»] scaffold0187 (1 HSPs)
scaffold0187 (148-192)||(2943-2987)


Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 32339592 - 32339834
Alignment:
Q  1 tggatggcggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatct 100  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339592 tggatggtggaaacttaggttaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatct 32339691  T
Q  101 ctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgttt 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339692 ctagagacagatgaacaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgttt 32339791  T
Q  201 gatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32339792 gatccatgtagtctattctacttagtgggataaggcttggttg 32339834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 37042789 - 37042671
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||||||||  |||||||||||| ||| | ||| |||||||| ||||||| |||||||||||||||||| | |  | |||||    
T  37042789 aaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgatccatgtagccgacccgactta 37042690  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  37042689 gtgggataaggcttggttg 37042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 40018318 - 40018228
Alignment:
Q  121 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||| |||||||| | |||||||| || ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  40018318 agaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaacattacggcgtcgtttgatccatgtag 40018228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 22420835 - 22420724
Alignment:
Q  132 taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggat 231  Q
    ||||||| | ||||||||||| |||||||||||||||||| || ||||||||  |||||||||| |||||||| |||||||  |  | ||||||||||||    
T  22420835 taagaaagatctagagattaatgagttggatagagatatggtaaatgatagagcattatggcgttgtttgatctatgtagttgaccccacttagtgggat 22420736  T
Q  232 aaggcttggttg 243  Q
    ||||||||||||    
T  22420735 aaggcttggttg 22420724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 38903843 - 38903757
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||| | || |||||||| |||||||||||||||||    
T  38903843 aaactattaagaaagacctaaagattaatgagtttgatagagatatgatatatgacataacattatggcatcgtttgatccatgtag 38903757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 40933032 - 40932935
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||| | |  | |||| |||||||||||||||    
T  40933032 ctagagattaatgagttggatagggatatgatatatgatagaacattatggcggcgtttgatgcatgtagccgaccccacttggtgggataaggcttg 40932935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 47147530 - 47147613
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||||||||||| | ||||||||||| ||||||||||||  ||||||||||||||||| |||||||| | ||||||||||||||    
T  47147530 aaactattaagaaagatctagagattaatgagttggataga--tatgatatatgatagaacattatggcattgtttgatccatgta 47147613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 49686870 - 49686968
Alignment:
Q  145 gagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| ||| ||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||| | |  | ||||||||||||||| ||||||||    
T  49686870 gagattaatgagctggatagggatatgatatatgatggaatattatggcgtcgtttgaaccatgtagccgaccccacttagtgggataagacttggttg 49686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 31339651 - 31339795
Alignment:
Q  96 aatctctagagacagatgaagaattagaaaaactat-taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcg 194  Q
    |||| |||||| |||| |||||  |||||||||||| | |||| || ||||||||||| ||||||||| || ||||| || ||||||||| |||||| ||    
T  31339651 aatcactagaggcagaggaagacctagaaaaactatatgagaattatctagagattaatgagttggatcgaaatatggtacatgatagaacattatgacg 31339750  T
Q  195 tcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||||| ||||||||  | |  | ||||||||||||||||||||    
T  31339751 tcgtttggtccatgtatccgaccccacttagtgggataaggcttg 31339795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 47372827 - 47372915
Alignment:
Q  144 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggata 232  Q
    ||||||||| |||||||||||| ||||| ||||| |||||| ||||||| |||||||||||||||||| | || | |||||||||||||    
T  47372827 agagattaatgagttggatagaaatatggtatattatagaacattatggagtcgtttgatccatgtagcccatcccacttagtgggata 47372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 49738677 - 49738557
Alignment:
Q  123 aaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctact 222  Q
    |||||||||||||||  | ||||| ||||| ||||||||||| | || ||||||||| |||| |||||||||  ||||||||||||||| | |  | | |    
T  49738677 aaaaactattaagaaggatctagaaattaatgagttggatagggttaggatatatgacagaacattatggcggtgtttgatccatgtagccgaccccatt 49738578  T
Q  223 tagtgggataaggcttggttg 243  Q
    |||||||||||||||||||||    
T  49738577 tagtgggataaggcttggttg 49738557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 41192221 - 41192336
Alignment:
Q  128 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtg 227  Q
    |||| |||||| | ||||||||||| |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||| | |  | || ||||     
T  41192221 ctataaagaaagatctagagattaatgagttggatagaaatatggtatatggtagaacattatggcttcgttcgatccatgtagccgacccgacatagtt 41192320  T
Q  228 ggataaggcttggttg 243  Q
    ||||||||||||||||    
T  41192321 ggataaggcttggttg 41192336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 25755473 - 25755591
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||||| || || | | |||||| ||||||||||| |||||||||||| |||||| ||||| | ||| ||||||||||| |||| || | | |||    
T  25755473 aaactattaagtaagacttggggattaatgagttggatagggatatgatatatcatagaacattatagtgtcatttgatccatgaagtcgatcccattta 25755572  T
Q  225 gtgggataaggcttggttg 243  Q
     ||||||||||||||||||    
T  25755573 atgggataaggcttggttg 25755591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 26024975 - 26024857
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||||||||| ||||||||| |||| ||| | |||||||||| ||||||| ||  ||| |||||||||| | |    |||||    
T  26024975 aaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtagccgacctcactta 26024876  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  26024875 gtgggataaggcttggttg 26024857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 934563 - 934439
Alignment:
Q  118 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctatt 217  Q
    |||||| ||||||||||||||   ||||||||||| ||||||||||| | ||||||||||||||||| |||||||   |||||  ||||||||| | |      
T  934563 attagagaaactattaagaaagttctagagattaatgagttggatagggttatgatatatgatagaacattatggttgcgtttattccatgtagccgacc 934464  T
Q  218 ctacttagtgggataaggcttggtt 242  Q
    | ||||||  |||||||||||||||    
T  934463 ccacttagatggataaggcttggtt 934439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 29801559 - 29801622
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||| ||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||||    
T  29801559 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 29801622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 42639145 - 42639034
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | |||| |||||| |||||||||||| ||||| ||| |||||||| ||||||||||||| | || ||||||| | |  |  ||||    
T  42639145 aaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatggcgtcgtgtaattcatgtagccaaccccgctta 42639046  T
Q  225 gtgggataaggc 236  Q
    ||||||||||||    
T  42639045 gtgggataaggc 42639034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 6843774 - 6843860
Alignment:
Q  127 actattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
    |||||||||||| | ||||||||||| ||||| |||||| ||||| ||||| |||||| |||||||| | ||| |||||||||||||    
T  6843774 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatggcattgttggatccatgtagtc 6843860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 31403163 - 31403029
Alignment:
Q  121 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattcta 220  Q
    ||||||||||||| |||| | |||||||||||  ||||||||||| || || |||||||||||  ||||||| || | ||||||||||||| | |  | |    
T  31403163 agaaaaactattatgaaagatctagagattaattagttggatagaaatgtggtatatgatagagcattatggtgttgcttgatccatgtagacgacccca 31403064  T
Q  221 cttagtgggataaggcttggttgcggttgtattta 255  Q
    |||||| ||||||  ||||||||  ||||||||||    
T  31403063 cttagtaggataaaacttggttgttgttgtattta 31403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 243
Target Start/End: Original strand, 25574982 - 25575099
Alignment:
Q  126 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttag 225  Q
    ||||||||||||| | ||||||||||| ||||||||| || ||||| | |||||||||| ||| ||| ||  ||||||||||||||   |  | | ||||    
T  25574982 aactattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccatttag 25575081  T
Q  226 tgggataaggcttggttg 243  Q
    ||||||||||||||||||    
T  25575082 tgggataaggcttggttg 25575099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 29209279 - 29209182
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| |||||||||||| ||||| |||||||||||  |||||||||| |||||||| |||||| | |  | ||||| ||||||||| ||||||||    
T  29209279 agattaatgagttggatagaaatatggtatatgatagagcattatggcgttgtttgatcaatgtagccgaccccacttaatgggataagacttggttg 29209182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 44686695 - 44686611
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||||| |||||| | ||||||||||||||||||| || | |||||||||||||||||| ||||||| ||||||| ||| |||||    
T  44686695 aaactatcaagaaaaatctagagattaacgagttgggtaaa-atatgatatatgatagaacattatggtgtcgttttatctatgta 44686611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 54470381 - 54470482
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| |||||||||||| ||||| |||||||  ||  ||||| ||||| |||||||||||||| | |  | |||||||||||| |||||||||    
T  54470381 ctagagattaatgagttggatagaaatatggtatatgactgagcattattgcgtcatttgatccatgtagccaaccccacttagtgggattaggcttggt 54470480  T
Q  242 tg 243  Q
    ||    
T  54470481 tg 54470482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 45209280 - 45209212
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| |||||||||| ||||||||||||||| | |  | ||||||||||||||||||||||||    
T  45209280 tatgatagaatattatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttggttg 45209212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 2557797 - 2557678
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattat-ggcgtcgtttgatccatgtagtctattctactt 223  Q
    |||||||||||||  | ||  ||||||||||||||||| || ||||| | |||||||||| ||||| || ||  |||||||||||||| | | || | ||    
T  2557797 aaactattaagaaggatctgaagattaacgagttggatcgaaatatggtttatgatagaacattattggtgtaatttgatccatgtagccaactccattt 2557698  T
Q  224 agtgggataaggcttggttg 243  Q
    ||||||||||||||||||||    
T  2557697 agtgggataaggcttggttg 2557678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 27450253 - 27450178
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtat 252  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||| |||||||    
T  27450253 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgctgttgtat 27450178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 44719463 - 44719368
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||| ||||| |||||| ||| | ||||| |||||  ||||||| |||||||||||||||||| | |  ||||||||||||||||| ||||||||    
T  44719463 attaatgagttagatagaaatacggtatataatagagcattatggtgtcgtttgatccatgtagccgaccctacttagtgggataagacttggttg 44719368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 55388333 - 55388218
Alignment:
Q  128 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtg 227  Q
    ||||||||||| |  | |||||||| ||||| ||| || ||||||| |||||||||| ||| ||| ||  |||||||||||| ||| |  | ||||||||    
T  55388333 ctattaagaaagatttggagattaatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgaccccacttagtg 55388234  T
Q  228 ggataaggcttggttg 243  Q
    ||||||||||||||||    
T  55388233 ggataaggcttggttg 55388218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 7682035 - 7681949
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||| |||||| | ||| ||||||| ||||| |||||| ||||| |||||||||| | ||||| || |||||||||||||||||    
T  7682035 aaactatcaagaaaaatctatagattaatgagttagatagaaatatggtatatgataggacattattgcatcgtttgatccatgtag 7681949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 253
Target Start/End: Original strand, 8284342 - 8284424
Alignment:
Q  171 gatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtatt 253  Q
    |||||||||||||  ||||||||||| |||||||||| ||| | || |||||||||||||| ||||||| |||  ||||||||    
T  8284342 gatatatgatagatcattatggcgtcatttgatccatatagccgatcctacttagtgggattaggcttgattgatgttgtatt 8284424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 18966762 - 18966848
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| | ||| ||||||  ||| ||||| |||||||||||||||| | || ||||||||| |||||||| |||||||    
T  18966762 aaactattaagaaagatctacagattagtgagctggattgagatatgatatatgacaaaacattatggcgccgtttgattcatgtag 18966848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 55007907 - 55008021
Alignment:
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 228  Q
    |||||||||| |  |||||||||| ||||||||  || ||||| | |||||||||  |||||| |||  |||||||||||||| | |  | |||||||||    
T  55007907 tattaagaaagatttagagattaatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtgg 55008006  T
Q  229 gataaggcttggttg 243  Q
    |||||||||||||||    
T  55008007 gataaggcttggttg 55008021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 6957800 - 6957873
Alignment:
Q  170 tgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||| |||||||||| | |||| |||| |||||||||||||| | || | ||||||||||||||||||||||||    
T  6957800 tgatgtatgatagaacactatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttg 6957873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 20105636 - 20105527
Alignment:
Q  132 taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggat 231  Q
    ||||||| | ||||||||| | ||||||||  || ||||| |||||||||| | ||||||||||| |||||||||||||| | ||   ||||||| |||     
T  20105636 taagaaagatctagagattgatgagttggactgaaatatggtatatgataggacattatggcgtcatttgatccatgtagccaatctcacttagtaggac 20105537  T
Q  232 aaggcttggt 241  Q
    ||||||||||    
T  20105536 aaggcttggt 20105527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 44667370 - 44667286
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||||| |||||| | ||||||||||||||||||| || | |||||||||||||||||| ||| ||| ||||||| ||| |||||    
T  44667370 aaactatcaagaaaaatctagagattaacgagttgggtaaa-atatgatatatgatagaacattttggtgtcgttttatctatgta 44667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 3979127 - 3979195
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| |||||| |||  |||||||||||||| ||| || || |||||||||||||||||||||    
T  3979127 tatgatagaacattatgacgtaatttgatccatgtagcctactccacatagtgggataaggcttggttg 3979195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 31959889 - 31959821
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  31959889 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 31959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 52569590 - 52569522
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  52569590 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 52569522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 21879279 - 21879220
Alignment:
Q  125 aaactatt-aagaaatacctagagattaacgagttggatagagatatgatatatgataga 183  Q
    |||||||| |||||| | |||||||| || ||||||||||||||||||||||||||||||    
T  21879279 aaactattcaagaaagatctagagatgaatgagttggatagagatatgatatatgataga 21879220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 30853500 - 30853586
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||| |||| | ||| ||||||| |||||| |||||| ||||| ||| ||| ||| ||||||  ||||||||||||||||||    
T  30853500 aaactattatgaaaaatctaaagattaatgagttgcatagaggtatgaaatacgattgaacattatgatgtcgtttgatccatgtag 30853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 34585691 - 34585757
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||| || ||||||||||| ||||||||||||||  ||  | ||||||||||||||||||||||||    
T  34585691 tgataaaacattatggcgtcatttgatccatgtagcttaacccacttagtgggataaggcttggttg 34585757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 51841323 - 51841241
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 207  Q
    |||||||||||||  |  |||| ||| | ||||||||||| |||||||||||||||| || |||||||||  |||||||||||    
T  51841323 aaactattaagaaggatttagaaattcaagagttggatagggatatgatatatgatacaacattatggcggtgtttgatccat 51841241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 2589246 - 2589347
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| |||||||||  | ||||| | | |||||||| | |||||||||||||||| |||||||   |  | | ||||||||||||||||||||    
T  2589246 ctagagattaatgagttggatgaaaatatggtttttgatagaacactatggcgtcgtttgattcatgtagctaaccccagttagtgggataaggcttggt 2589345  T
Q  242 tg 243  Q
    ||    
T  2589346 tg 2589347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 8599066 - 8598957
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||| |  |||| ||||| || ||| ||| | ||| |||||||| |||||||||||||||||| ||||||| | |  | |||||    
T  8599066 aaactattaagaaagatctaaatgttaatgagttagaaagaaataaggtatttgatagaacattatggcgtcgtttgattcatgtagccgacgccactta 8598967  T
Q  225 gtgggataag 234  Q
    ||||||||||    
T  8598966 gtgggataag 8598957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 39761457 - 39761336
Alignment:
Q  121 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattcta 220  Q
    |||||||||||| || |  | |||||||||||| |||| ||||||||| |||| ||| |||||| || |||| ||| ||||||| |||||| | | |  |    
T  39761457 agaaaaactatttagcacaatctagagattaacaagttagatagagatgtgatgtataatagaacatcatggtgtcctttgatctatgtagccgacttca 39761358  T
Q  221 cttagtgggataaggcttggtt 242  Q
    |||||| |||||||| ||||||    
T  39761357 cttagtcggataaggattggtt 39761336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 43434134 - 43434199
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| | || |||||| |||||||||||||||| |  | ||||||||||||||||||||||||    
T  43434134 gatagaacactacggcgtcatttgatccatgtagtcgagcccacttagtgggataaggcttggttg 43434199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 45569134 - 45569085
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgata 174  Q
    |||||||||||||| | |||||||| || |||||||||||||||||||||    
T  45569134 aaactattaagaaaaatctagagatcaatgagttggatagagatatgata 45569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 48154955 - 48154894
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 203  Q
    ||||||||||| |||||||||||| | ||||||||||| |||| |||||||| | |||||||    
T  48154955 ctagagattaatgagttggatagaaacatgatatatgacagaacattatggcattgtttgat 48154894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 55028995 - 55029056
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 203  Q
    ||||||||||| ||| | |||||| ||||| |||||||||||| ||||||||||| ||||||    
T  55028995 ctagagattaatgagctagatagaaatatgttatatgatagaacattatggcgtcatttgat 55029056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 436436 - 436504
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||||||    
T  436436 tatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 1777092 - 1777024
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||| ||||||||||||||||||    
T  1777092 tatgatagaacagtatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttg 1777024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 19062010 - 19061942
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | || |||||||||||||||||||||    
T  19062010 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacctagtgggataaggcttggttg 19061942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 33709966 - 33710054
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacag 110  Q
    ||||| ||| ||||| ||||||||||| |||| |||||| ||| || ||||||| || ||| ||||||| |||| ||| ||||||||||    
T  33709966 aggtggtttaggcatgtggagagaagaactgtggattctgtagtaaagagagtggatcagaaggagggtagtcagatcactagagacag 33710054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 34208376 - 34208276
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| |||||||||  | ||||| | |||||||||| |||||||||   ||||||||||||| || |  |  |||| |||||||||||||||||    
T  34208376 tagagattaatgagttggatccaaatatggtttatgatagaacattatggcgcaatttgatccatgtactcgaccccccttattgggataaggcttggtt 34208277  T
Q  243 g 243  Q
    |    
T  34208276 g 34208276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 48622618 - 48622550
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| ||| |||||||||| | |  | ||||||||||||||||||||||||    
T  48622618 tatgatagaacactatggcgtcatttaatccatgtagccgaccccacttagtgggataaggcttggttg 48622550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 4441060 - 4441123
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 238  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||||||||    
T  4441060 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 31961505 - 31961422
Alignment:
Q  23 ggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagag 106  Q
    |||| ||||||||| | |||||||||| ||| |||||| |||  ||||||||| ||||||||||| |  |||||||| ||||||    
T  31961505 ggtggtttgggcatgtagagagaagacttgtggattctgtagttaggagagtggattagatggagaggagtcaaatcactagag 31961422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 35690478 - 35690545
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||| |||||||    
T  35690478 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggtt 35690545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 38017318 - 38017361
Alignment:
Q  197 gtttgatccatgtagtctattctacttagtgggataaggcttgg 240  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  38017318 gtttgatccatgtagccgatcctacttagtgggataaggcttgg 38017361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 50238677 - 50238622
Alignment:
Q  188 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  50238677 tatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 50238622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 50238763 - 50238708
Alignment:
Q  188 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  50238763 tatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 50238708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 7970482 - 7970420
Alignment:
Q  149 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||| ||||| |||||| ||||  ||||||||| || ||||||| ||||||||||||||||||    
T  7970482 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 7970420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 13262421 - 13262487
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| |||| ||||||||||| ||||||| | | || |||||||| |||||||||| ||||    
T  13262421 tgatagaaaactatgacgtcgtttgattcatgtagccgactccacttagtgtgataaggcttagttg 13262487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 20999157 - 20999243
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| | |||||| |||| |||||| ||| | |||||  ||||| ||||  |||||| ||||||||||||| |||||    
T  20999157 aaactattaagaaagatctagagtttaatgagttgaataaatatatggcatatggtagagcattatgacgtcgtttgatccttgtag 20999243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 21237063 - 21237133
Alignment:
Q  173 tatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||| | ||||||||| |||||| ||||||| | |  | |||||||||||||||| |||||||    
T  21237063 tatatgatagaacactatggcgtcatttgatacatgtagccaaccccacttagtgggataaggattggttg 21237133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 29182604 - 29182666
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatag 182  Q
    |||| ||||||||||||| || ||||||||||| ||||||||| || || | |||||||||||    
T  29182604 tagagaaactattaagaagtatctagagattaatgagttggatggatatgtcatatatgatag 29182666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 39708619 - 39708709
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgc 244  Q
    |||||||||  | ||||| | |||||||||| | |||| |||  |||||||||||||||| |  | ||||||||||||||| |||||||||    
T  39708619 gagttggatccaaatatggtttatgatagaacactatgtcgtaatttgatccatgtagtcgaccccacttagtgggataagacttggttgc 39708709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 42293390 - 42293332
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgataga 183  Q
    |||||||||||||| | ||||| ||||| ||||| |||||| ||||| |||||||||||    
T  42293390 aaactattaagaaagatctagaaattaatgagttagatagacatatggtatatgataga 42293332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 44047491 - 44047377
Alignment:
Q  130 attaagaaatacctagagattaacgagttggatagagatatgatatatgat-agaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 228  Q
    ||||||||| | ||||||||||| ||||||||||   ||||| |||||||| |||  || |||| | |||||||| ||||||| | |  | |||||||||    
T  44047491 attaagaaagatctagagattaatgagttggataataatatggtatatgataagagcataatggtgacgtttgattcatgtagccaaccccacttagtgg 44047392  T
Q  229 gataaggcttggttg 243  Q
    |||| ||||||||||    
T  44047391 gatatggcttggttg 44047377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 49939807 - 49939741
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||||||| |||||    
T  49939807 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttg 49939741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 53540447 - 53540565
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||| |||| || | |||||||| |||||||| | | ||||| | |||||||||| |||||||| |  |||||||||| ||| | |  | ||| |    
T  53540447 aaactattaggaaagacttggagattaatgagttggacaaaaatatggtttatgatagaacattatggcataatttgatccatatagccaaccccactga 53540546  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||| ||||||||    
T  53540547 gtgggataagacttggttg 53540565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 35555758 - 35555657
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    |||||||| || |||||||| | ||| ||| | | |||||| | | |||||||||||||||| ||||||| | | || | ||||||||| ||||||||||    
T  35555758 ctagagataaatgagttggagaaagacatggtttttgatagtacagtatggcgtcgtttgattcatgtagccgactccatttagtgggacaaggcttggt 35555659  T
Q  242 tg 243  Q
    ||    
T  35555658 tg 35555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 43971387 - 43971432
Alignment:
Q  198 tttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||| | |||||||| ||||||||||||||||||    
T  43971387 tttgatccatttagtcaactctacttattgggataaggcttggttg 43971432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 47372915 - 47372988
Alignment:
Q  179 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtat 252  Q
    |||||| |||||| | |||| |||||||||||| | |  |||||||||||||||||||||| |||  |||||||    
T  47372915 atagaacattatgacatcgtctgatccatgtagccgaccctacttagtgggataaggcttgattgttgttgtat 47372988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 19969388 - 19969456
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||   ||||||||| |||||||||||||| | |  | |||||||||||||||||| |||||    
T  19969388 tatgatagaacgctatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttg 19969456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 20047592 - 20047648
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgata 181  Q
    ||||||||||  || | ||||||||||| ||||||||||||||||| | ||||||||    
T  20047592 aaactattaaagaagatctagagattaatgagttggatagagatatcaaatatgata 20047648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 26025044 - 26024988
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgata 181  Q
    |||||||||||||| | ||||||||||| ||||||||| |||| ||| | |||||||    
T  26025044 aaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgata 26024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 33227416 - 33227484
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||| |||| |||||||||||||| | || | || |||||| ||||||||||||||    
T  33227416 tatgatagaacactatgacgtcatttgatccatgtagccgatcccacctagtggaataaggcttggttg 33227484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 46582900 - 46582833
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||   ||||||||| |||||||||||||| |||  | ||||||| ||||||||||||||||    
T  46582900 tatgatagaaccctatggcgtcatttgatccatgtagccta-cccacttagtaggataaggcttggttg 46582833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 51421937 - 51422005
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| |||||| |||  |||||||||||||| | ||   |||||||||||||| |||||||||    
T  51421937 tatgatagaacattatgacgtaatttgatccatgtagccaatctcacttagtgggataaagcttggttg 51422005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 56200153 - 56200185
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccat 207  Q
    |||||||||| ||||||||||||||||||||||    
T  56200153 tatgatagaacattatggcgtcgtttgatccat 56200185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 8197666 - 8197548
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | |  |||||||    
T  8197666 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8197567  T
Q  225 gtgggataaggcttggttg 243  Q
    ||||||||| |||||||||    
T  8197566 gtgggataatgcttggttg 8197548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 8202426 - 8202308
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | |  |||||||    
T  8202426 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8202327  T
Q  225 gtgggataaggcttggttg 243  Q
    ||||||||| |||||||||    
T  8202326 gtgggataatgcttggttg 8202308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 3305934 - 3305817
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||| |||||||| |||||||||||||||||||||| ||| |||||||| | ||||| |||||||||||||||||||||| ||||  || | ||||     
T  3305934 aaactataaagaaatatctagagattaacgagttggatatagaaatgatatacggtagaacattatggcgtcgtttgatccatatagtggatcccacttt 3305835  T
Q  225 gtgggataaggcttggtt 242  Q
    ||||||||||||||||||    
T  3305834 gtgggataaggcttggtt 3305817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 19235109 - 19234991
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||| ||||| | ||||||||||| || ||||||||| ||||| ||| |||||||| ||| || |||||||| |||||||||| | | || |||||    
T  19235109 aaactattgagaaagatctagagattaatgatttggatagaaatatggtatttgatagaacattctgtcgtcgtttaatccatgtagccaactccactta 19235010  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||| ||||    
T  19235009 gtgggataaggcttagttg 19234991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 33504380 - 33504499
Alignment:
Q  125 aaactattaagaaatacctagagatt-aacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactt 223  Q
    |||||||||||||| | ||||||||| ||  |||||||| || ||||| |||||||||||| ||||||||||  |||||||||| ||| | |  | ||||    
T  33504380 aaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaacattatggcgtaatttgatccatctagccgaccccactt 33504479  T
Q  224 agtgggataaggcttggttg 243  Q
    ||||||||||||||||||||    
T  33504480 agtgggataaggcttggttg 33504499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 19337018 - 19336900
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||| |||||| |  |||||||||| ||||||||| || ||||| | |||||||||| ||||||||||  |||||||||||||| | || | |||||    
T  19337018 aaactataaagaaagatttagagattaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaatcccactta 19336919  T
Q  225 gtgggataaggcttggttg 243  Q
     |||||||| |||||||||    
T  19336918 ttgggataaagcttggttg 19336900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 38435109 - 38435227
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||||||||| | ||||||| || || || | |||||| ||| ||||||||||  |||||||||||||| | || | |||||    
T  38435109 aaactattaagaaagatctagagattaatgtgttggatcgaaatttggtttatgattgaacattatggcgtaatttgatccatgtagccgatcccactta 38435208  T
Q  225 gtgggataaggcttggttg 243  Q
    |||| ||||||||||||||    
T  38435209 gtggcataaggcttggttg 38435227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 37470258 - 37470146
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||| || | | ||||||||||| ||||||||| || |||||  ||||||||||| ||||||| || |||||||||||||||   || | |||||    
T  37470258 aaactattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatggtgtagtttgatccatgtagctaatcccactta 37470159  T
Q  225 gtgggataaggct 237  Q
    |||||||||||||    
T  37470158 gtgggataaggct 37470146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 2906118 - 2906036
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 207  Q
    |||||||||||||| |  ||||||| || |||||||||| ||| ||| |||||||||||| ||||||| ||||||||||||||    
T  2906118 aaactattaagaaaaatgtagagatcaatgagttggataaagaaatgttatatgatagaatattatggtgtcgtttgatccat 2906036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 9556494 - 9556376
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | |||| |||||| |||||||||  ||||||| | |||||||||| |||| || ||  |||||| ||||||| | | || |||||    
T  9556494 aaactattaagaaagatctagtgattaatgagttggatcaagatatggtttatgatagaacattagggtgtaatttgatacatgtagccgactccactta 9556395  T
Q  225 gtgggataaggcttggttg 243  Q
    ||||||| |||||||||||    
T  9556394 gtgggatgaggcttggttg 9556376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 32402674 - 32402772
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttgg 240  Q
    ||||||||||| |||||||||||| ||| | |||||||||||| |||||||  || ||||||||| |||| | || || |||||||||||||| |||||    
T  32402674 ctagagattaatgagttggatagaaataaggtatatgatagaacattatggtttcatttgatccacgtagacgatcctgcttagtgggataagacttgg 32402772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 42092674 - 42092792
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||| ||| |  ||||||||||  |||||||||| |||| |||||||||||||  ||| |||||| |||||||||||||||   |  |||||||    
T  42092674 aaactattaaaaaagatgtagagattaattagttggatagtgatacgatatatgatagaggattgtggcgttgtttgatccatgtagctgaccctactta 42092773  T
Q  225 gtgggataaggcttggttg 243  Q
    || |||| |||||||||||    
T  42092774 gtaggattaggcttggttg 42092792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 242
Target Start/End: Complemental strand, 13240912 - 13240771
Alignment:
Q  101 ctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgttt 200  Q
    |||||| |||| |||||  ||||||||||||||||||| | |||||||||||||||||| || || || || | ||||||| |  |||||| ||| ||||    
T  13240912 ctagaggcagaggaagacctagaaaaactattaagaaagatctagagattaacgagttgaatcgaaatttggtttatgataaaccattatgccgttgttt 13240813  T
Q  201 gatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    ||||| ||| | | |  |  ||||||||||||||||||||||    
T  13240812 gatccgtgtcgccgacccagcttagtgggataaggcttggtt 13240771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 19024335 - 19024452
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||| ||||||| |||||||||| | |||  |||| ||||||||  |||||||||||||||||| || ||| | |  | ||| |    
T  19024335 aaactattaagaaagatctaaagattaatgagttggatataaatacaatatttgatagaactttatggcgtcgtttgatctatatagccgaccccactca 19024434  T
Q  225 gtgggataaggcttggtt 242  Q
    ||||||||||||||||||    
T  19024435 gtgggataaggcttggtt 19024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 37481749 - 37481624
Alignment:
Q  118 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctatt 217  Q
    |||||| |||||||||||||| | |||| ||| || |||||||||| | ||||| ||| |||||||||||||||| ||| |||||| ||| ||||| |      
T  37481749 attagagaaactattaagaaagatctagcgataaatgagttggataaaaatatggtatttgatagaaaattatggtgtcttttgattcatctagtcgacc 37481650  T
Q  218 ctacttagtgggataaggcttggttg 243  Q
    | || |||| ||||||||| ||||||    
T  37481649 ccacgtagtcggataaggcgtggttg 37481624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 9496023 - 9496141
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||| ||||| |  ||||| |||| |||||||||  | ||||| | |||||||||| ||||||||||  |||||||||||||| | |  | |||||    
T  9496023 aaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaaccccactta 9496122  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||| ||||||||||||    
T  9496123 gtgggacaaggcttggttg 9496141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 28960336 - 28960218
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||| |||||||  | |||||||| || |||||||| | ||||||| | | |||||||  | ||||| |||||||||| ||||||||| | || | |||    
T  28960336 aaactgttaagaaggatctagagataaatgagttggagaaagatatggtttttgatagagcactatggtgtcgtttgattcatgtagtcgactccattta 28960237  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  28960236 gtgggataaggcttggttg 28960218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 33287578 - 33287696
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||| ||||| ||||| ||| || ||||| | |||||||||| |||||| | | ||||||||| ||||| | | || |||||    
T  33287578 aaactattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattatgacatagtttgatccttgtagccaactccactta 33287677  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||| ||| ||||||||    
T  33287678 gtgggacaagacttggttg 33287696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 43832255 - 43832341
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||  | ||||||||||| ||||||||||  |||||||| ||| |||||| |||||| || | ||||||||||||||    
T  43832255 aaactattaagaaggatctagagattaatgagttggataaggatatgatgtattatagaacattatgacggcatttgatccatgtag 43832341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 12475002 - 12474925
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtat 252  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||  |||||||    
T  12475002 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtat 12474925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 26670925 - 26671042
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| |  |||||||||| ||||||||   | ||||||| |||||||||| || |||| ||  |||||||||||||| | |  || ||||    
T  26670925 aaactattaagaaagatttagagattaatgagttggaccaaaatatgatttatgatagaatataatggtgtaatttgatccatgtagccgacactgctta 26671024  T
Q  225 gtgggataaggcttggtt 242  Q
    |||||||||| |||||||    
T  26671025 gtgggataagacttggtt 26671042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 29159286 - 29159359
Alignment:
Q  161 atagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 234  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||||  | |||||| |||| ||||||||    
T  29159286 atagaaatatgatatttgataaaatattatggcgtcgtttgatccatgtatccgattctatttagcgggataag 29159359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 227396 - 227464
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  227396 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 227464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 1626352 - 1626460
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||||||||| |||||| ||| | ||||||||||| |||||| |||    ||| ||||||||||||| | | || |||||||    
T  1626352 aaactattaagaaagatctagagattaatgagttgtataaaaatatgatatataatagaacattgcaacgttgtttgatccatgtggccgatcctactta 1626451  T
Q  225 gtgggataa 233  Q
    |||| ||||    
T  1626452 gtggtataa 1626460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 7326235 - 7326167
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  7326235 tatgatagaacactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttg 7326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 28508885 - 28508953
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  28508885 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 28508953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 30306239 - 30306307
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  30306239 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 30306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 31254445 - 31254513
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggc 193  Q
    |||||||||||||| | ||||||||||| |||||| ||||| ||||||| ||||| |||| ||||||||    
T  31254445 aaactattaagaaagatctagagattaatgagttgaatagaaatatgatttatgacagaacattatggc 31254513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 15836115 - 15836206
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 234  Q
    ||||||||||||||||||||||||||||||||| |||| | |  |||||  || ||||| ||||||||| | |  | |||||||||||||||    
T  15836115 tagagattaacgagttggatagagatatgatatctgattggacgttatgttgttgtttggtccatgtagccgaccccacttagtgggataag 15836206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 43260446 - 43260529
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctaga 105  Q
    ||||| ||||||||| || ||| ||||| ||| |||||||||| |||||||||  || ||||||||||| |||||||| |||||    
T  43260446 aggtggtttgggcatgtgaagaaaagacttgtagattctatagtaaggagagtagatcagatggagggtagtcaaatcactaga 43260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 1303530 - 1303468
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||| ||||||||||| |||||| ||||| |||||| ||||||||| | |||||||||||||    
T  1303530 attaatgagttggatagggatatgctatattatagaatattatggcggcatttgatccatgta 1303468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 3635396 - 3635330
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  3635396 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 3635330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 12882170 - 12882052
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||| || ||||||  ||||| |||| |||||||||  | ||||| | | |||||||| ||| ||||||  |||||||||||||| |||    |||||    
T  12882170 aaactactaggaaatatttagaggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaatttgatccatgtagcctacctcactta 12882071  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  12882070 gtgggataaggcttggttg 12882052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 15025703 - 15025769
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | |||||| ||||||||| ||||||| | || | ||||||||||||||||||||||||    
T  15025703 tgatagaacactatggcatcgtttgattcatgtagccgatgcaacttagtgggataaggcttggttg 15025769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 33625323 - 33625257
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatg 191  Q
    |||||||||||||||| ||||||||||| |||||||| ||  ||||| | |||||||||| ||||||    
T  33625323 aaactattaagaaatatctagagattaatgagttggaaagtaatatggtttatgatagaacattatg 33625257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 41197300 - 41197234
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| ||||||||||| |||||||||||||||| |  | ||||  ||||||||||||||||||    
T  41197300 tgatagaacattatggcgtcatttgatccatgtagtcgaccccacttgatgggataaggcttggttg 41197234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 42149785 - 42149715
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgt 195  Q
    |||||||||||||| | ||||||||||  ||| |||||||| ||||| | |||||||||| ||||||||||    
T  42149785 aaactattaagaaagatctagagattattgagctggatagaaatatggtttatgatagaacattatggcgt 42149715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 43573231 - 43573137
Alignment:
Q  149 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||| |||||||||  | ||||||| |||||| |||  |||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  43573231 ttaatgagttggatccaaatatgatttatgatcgaacgttatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 43573137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 4807805 - 4807870
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  4807805 gatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 4807870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 12734886 - 12734975
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||| | |||||||||| | ||||| ||  |||||||||||||||| |  | ||||||||||||||||||||||||    
T  12734886 gagttggatccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagtcgaccccacttagtgggataaggcttggttg 12734975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 25834864 - 25834953
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||| | |||||||||| | | ||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  25834864 gagttggatccaaatatggtttatgatagaacactgtggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 25834953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 41779231 - 41779178
Alignment:
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatag 182  Q
    |||||| ||| | ||||||||||| |||||| ||||||||||||||||||||||    
T  41779231 tattaaaaaagatctagagattaatgagttgaatagagatatgatatatgatag 41779178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 451723 - 451655
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||| ||||||||||||    
T  451723 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttggttg 451655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 3243728 - 3243660
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| ||||||||| |||| | |  | ||||||||||||||||||||||||    
T  3243728 tatgatagaacactatggcgtcatttgatccaggtagccgaccccacttagtgggataaggcttggttg 3243660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 9531675 - 9531607
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||| ||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  9531675 tatgatggaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 9531607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 10516831 - 10516756
Alignment:
Q  168 tatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct-acttagtgggataaggcttggttg 243  Q
    |||||| ||||||| || ||||||||||  |||||||||||||| ||  ||| ||||||||||||||||||||||||    
T  10516831 tatgatttatgataaaatattatggcgtaatttgatccatgtag-ctgatctcacttagtgggataaggcttggttg 10516756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 3481334 - 3481397
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||| ||||||| ||| ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  3481334 attaacaagttggacagaaatatggtctatgatagaacattatggcgtaatttgatccatgtag 3481397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 4598635 - 4598568
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgc 244  Q
    |||||||| | ||||||||| |||||| ||||||  | |||| |||||| ||||||||||||||||||    
T  4598635 tgatagaacactatggcgtcatttgattcatgtaaccgattccacttagcgggataaggcttggttgc 4598568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 6841523 - 6841484
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctatt 217  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  6841523 gatagaacattatggcgtcgtttgatccgtgtagtctatt 6841484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 17670688 - 17670743
Alignment:
Q  188 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  17670688 tatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 17670743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 23915818 - 23915735
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 208  Q
    |||||||||||||| | ||||||||||| ||| |||| |||  |||| | |||||||||| | ||||||||  |||||||||||    
T  23915818 aaactattaagaaaaatctagagattaatgaggtggacagaactatggtttatgatagaacactatggcgtaatttgatccatg 23915735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 26784465 - 26784350
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| |  |||||||||| |||||| ||||| ||||| ||||||||| || ||| |||  |  |||||||||||||| | ||   |||||    
T  26784465 aaactattaagaaagatatagagattaatgagttgaatagaaatatggtatatgataaaacattttggtttaatttgatccatgtagccaatctcactta 26784366  T
Q  225 gtgggataaggcttgg 240  Q
    || ||||||| |||||    
T  26784365 gtaggataagacttgg 26784350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 38328444 - 38328377
Alignment:
Q  176 atgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||||||    
T  38328444 atgatagaacactatggcttcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 38328377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 6230396 - 6230278
Alignment:
Q  118 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctatt 217  Q
    |||||| |||||||||||||| | ||||||||||  || || ||||   ||||| ||||||||| || |||||  | | |||||||| |||||| ||| |    
T  6230396 attagagaaactattaagaaaaatctagagattattgaatttgatatgaatatggtatatgataaaatattataacattgtttgatctatgtagcctact 6230297  T
Q  218 ctacttagtgggataaggc 236  Q
    | | |||||||||||||||    
T  6230296 ccatttagtgggataaggc 6230278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 12141701 - 12141787
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||| |||| || |||||||||| || ||||||  | ||||| |||||||||||| |||||||| |  ||||||| ||||||    
T  12141701 aaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaacattatggcatgatttgatcgatgtag 12141787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 12489927 - 12489809
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||| |||  | |||||||| || |||||||| | ||| ||| | | ||||| || | | |||||||||||||| ||||||| | |  | |||||    
T  12489927 aaactattaggaaggatctagagataaatgagttggagaaagacatggtttttgatataacactttggcgtcgtttgattcatgtagccgaccccactta 12489828  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  12489827 gtgggataaggcttggttg 12489809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 44437846 - 44437728
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||  | |||||||| || |||||||| | | | ||| | | |||||||| | |||||||| |||| || ||||||| | |  | |||||    
T  44437846 aaactattaagaaggatctagagataaatgagttggagaaaaacatggtttttgatagaacactatggcgttgtttaattcatgtagccgaccccactta 44437747  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  44437746 gtgggataaggcttggttg 44437728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 8491276 - 8491364
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatat--atgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| |  ||||| ||||| | |||||| || |||||||||  ||||||||| |||||| ||| ||||||| |||||||    
T  8491276 aaactattaagaaagatttagaggttaacaatttggattgaaatatgatatatatgatagaacattatgacgttgtttgatacatgtag 8491364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 12026130 - 12026081
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgata 174  Q
    |||||||||||||| | ||||||||||| ||||| |||||| ||||||||    
T  12026130 aaactattaagaaagatctagagattaatgagtttgatagaaatatgata 12026081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 2377164 - 2377280
Alignment:
Q  80 agatggagggtggtcaaatctctagagacagatgaaga-attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatg 178  Q
    ||||||||| | |||| ||| |||||||||||||||||  | ||| |||||||||| ||| |  |||||| ||| |||||||||  |  |||| ||||||    
T  2377164 agatggaggatagtcagatcactagagacagatgaagacctaagataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatg 2377263  T
Q  179 atagaaaattatggcgt 195  Q
    |||||| ||||| ||||    
T  2377264 atagaacattatagcgt 2377280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 6219140 - 6219240
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||  ||||||||  || ||||| | |||||||||| ||||||| ||  |||||||||||||| | |  | || |||| |||||||||||||||    
T  6219140 tagagattagtgagttggaccgaaatatggtttatgatagaacattatggtgtaatttgatccatgtagccaaccccacctagttggataaggcttggtt 6219239  T
Q  243 g 243  Q
    |    
T  6219240 g 6219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 12520137 - 12520069
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| || | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  12520137 tatgataaaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 12520069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 19015914 - 19015982
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| |||| || ||||| ||| ||||||||| ||| | |||| | |||||||||||||||||    
T  19015914 tagagattaatgagtcgggtagaggtatcatatatgattgaacaatatgacatcgtttgatccatgtag 19015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 19855619 - 19855747
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | | |||| |||| ||| |||||||| | ||| |||||||||||  ||||||||| | ||  |||||||||| | |  | |||||    
T  19855619 aaactattaagaaagatccagaggttaatgagctggatagaaacatggtatatgatagagcattatggcgccattcaatccatgtagccgaccccactta 19855718  T
Q  225 gtgggataaggcttggttgcggttgtatt 253  Q
    || |||||| || ||||||  ||||||||    
T  19855719 gtaggataaagcgtggttgttgttgtatt 19855747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 35755320 - 35755252
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||| || |||  ||||||||||| || | |  ||||||||||||||||||||||||||    
T  35755320 tatgatagaacattgtgccgtaatttgatccatgcagccgaccctacttagtgggataaggcttggttg 35755252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 38430093 - 38430157
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    |||||||| | ||||||||| |||||||||||||| | |  | |||||||| |||||||||||||    
T  38430093 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgagataaggcttggt 38430157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 41763102 - 41763050
Alignment:
Q  191 ggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  41763102 ggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 41763050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 38868924 - 38869164
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||||||| | ||||||| ||  || |||||| |||  ||||||||  |||||||||||||| ||||||||  ||||| |||| |||||  ||    
T  38868924 aggtggtttgggcatgtagagagaacactagtagattctctagcgaggagagtagattagatggagggtagtcaaatcattagaggcagaagaagaccta 38869023  T
Q  122 gaaaaactat------------taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 209  Q
    ||||||||||            ||||||| | |||| |||||| | |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  38869024 gaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagatatatggtatatgatagaacattatggcgtcgtttgatccatgt 38869123  T
Q  210 agtctattctacttagtgggataaggcttggttgcggttgt 250  Q
    || | |  | ||||||||||| || |||||||||| |||||    
T  38869124 agccgaccccacttagtgggaaaatgcttggttgctgttgt 38869164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 38877447 - 38877332
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcg 245  Q
    ||||||||||||||||||| |||||  |||| ||||||| ||||||||||| |||||||||||||| | |  | |||||||||||||||||||||||| |    
T  38877447 agattaacgagttggatagggatatagtatacgatagaacattatggcgtcatttgatccatgtagccgaacccacttagtgggataaggcttggttgtg 38877348  T
Q  246 gttgtatttagggata 261  Q
    |||||| |||| ||||    
T  38877347 gttgtaattagagata 38877332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 5338747 - 5338956
Alignment:
Q  3 gatggcggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 102  Q
    ||||| ||||||| || | ||||| |||||||||   |||||||||||||| ||| || ||| |||||||||  || ||||||||| |  ||| ||| ||    
T  5338747 gatggtggaaactgagcttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcagatggaggatattcagatcact 5338846  T
Q  103 agagacagatgaagaattagaaaaactatta-agaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttg 201  Q
    |||| |||| | |||  |||||||||||| | ||||| | ||||||||||| ||||||||| || || |||| ||| |||||| ||||||||||  ||||    
T  5338847 agaggcagaagtagacctagaaaaactataagagaaagatctagagattaatgagttggatcgaaatgtgatttattatagaacattatggcgtaatttg 5338946  T
Q  202 atccatgtag 211  Q
    ||||||||||    
T  5338947 atccatgtag 5338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 6025779 - 6025880
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| |||||||||||| ||||| ||| |||||||| || |||||||| |||||||||||||| | |||| ||||||||||||||  ||||||    
T  6025779 ctagagattaatgagttggatagaaatatggtatctgatagaacatgatggcgtcatttgatccatgtagccgattccacttagtgggataatacttggt 6025878  T
Q  242 tg 243  Q
    ||    
T  6025879 tg 6025880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 13827823 - 13827620
Alignment:
Q  9 ggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagac 108  Q
    |||||||  ||||||||| ||||| ||| | |||||||||  ||| |||||| ||| |||||||||  || | |||||   | |||| ||| |||||| |    
T  13827823 ggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcatatggaacatagtcagatcactagaggc 13827724  T
Q  109 agatgaagaattagaaaaactattaagaaatac--ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatcca 206  Q
    ||| |||||  ||||||||||||||||||| |   ||||||||||| |||||||||||| ||||| |||||||||||| |||||| ||| |||| ||| |    
T  13827723 agaggaagacctagaaaaactattaagaaaaaagtctagagattaatgagttggatagaaatatggtatatgatagaacattatgacgttgtttcatcta 13827624  T
Q  207 tgta 210  Q
    ||||    
T  13827623 tgta 13827620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 30396835 - 30396736
Alignment:
Q  144 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||||||| | |||||||||| ||||| | |  | ||||||||||||||||||||||||    
T  30396835 agagattaatgagttggatagggatacgatatatgatagaacattatggtggcgtttgatccgtgtagccaaccccacttagtgggataaggcttggttg 30396736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 50636237 - 50636352
Alignment:
Q  124 aaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactt 223  Q
    ||||||||||||| | | ||||||||||  |||||||||| | ||||| |||||||||||  |||||| | || ||||||| |||||||| |||||||||    
T  50636237 aaaactattaagataaatctagagattattgagttggataaaaatatggtatatgatagagcattatgacatcatttgatcaatgtagtcgattctactt 50636336  T
Q  224 agtgggataaggcttg 239  Q
    || |||||||||||||    
T  50636337 agcgggataaggcttg 50636352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 4590662 - 4590539
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 219  Q
    ||||||||||||||||||| |  || ||||| | |||||||||||| ||||||||| |||||||| | ||||| ||  |||||||||||||| | |  |     
T  4590662 tagaaaaactattaagaaagatttatagattgatgagttggatagatatatgatatgtgatagaacaatatggtgtaatttgatccatgtagccgacccc 4590563  T
Q  220 acttagtgggataaggcttggttg 243  Q
    |||||||||||||||| |||||||    
T  4590562 acttagtgggataaggtttggttg 4590539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 33561080 - 33560868
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaa------------aaa 127  Q
    |||||||||||||| |||||| ||| |||||||||  ||  |||||||||| |||||||| |||||| |||| ||||   |||||            |||    
T  33561080 gagagaagacctgtagattctgtagtaaggagagtagatatgatggagggtagtcaaatcactagaggcagaggaagtcctagaaaaactgtaagggaaa 33560981  T
Q  128 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtg 227  Q
    |||||||| || | |||||||||| ||||||||||| | ||||| ||||| | |||| |||||| | | ||||||||||||||| | |  ||||||||||    
T  33560980 ctattaagtaagatctagagattagcgagttggatataaatatggtatatcagagaacattatgacattgtttgatccatgtagccaaccctacttagtg 33560881  T
Q  228 ggataaggcttgg 240  Q
    |||||||||||||    
T  33560880 ggataaggcttgg 33560868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 242
Target Start/End: Complemental strand, 109143 - 109002
Alignment:
Q  101 ctagagacagatgaagaattagaaaaactatta-agaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtt 199  Q
    ||||||||| ||| |||  |||||||||||| | ||||| |  |||| ||||| |||||||||| | ||||||| |||||||||| ||||||||||| ||    
T  109143 ctagagacatatgtagacctagaaaaactataagagaaagatatagacattaatgagttggataaatatatgatgtatgatagaacattatggcgtcatt 109044  T
Q  200 tgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||||| || | | || ||||||||||| ||||||||    
T  109043 tgatccatgtagcctgtcccac-tagtgggataaagcttggtt 109002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 8796366 - 8796484
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||| ||||| || |||||| || ||||| | |||||||||| ||||||||||  ||| |||||||||| | |  | |||||    
T  8796366 aaactattaagaaagatctagatattaatgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccatgtagccgaccccactta 8796465  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  8796466 gtgggataaggcttggttg 8796484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 49377490 - 49377576
Alignment:
Q  157 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| || |||||||||||||||| |||||||||  ||||||||||||||| | | || | ||||||||||||||||||||||    
T  49377490 ttggatagggaaatgatatatgatagaacattatggcggtgtttgatccatgtagccgactccagttagtgggataaggcttggttg 49377576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 15577575 - 15577660
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||||||||||  |  |||||||||| |||||||||||||||||||||| |||||||| ||||| | || ||||||||||||||    
T  15577575 aaactattaagaaggatatagagattaatgagttggatagagatatgatatttgatagaacattattgtgttgtttgatccatgta 15577660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 42501269 - 42501382
Alignment:
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 228  Q
    |||||||||| | ||| ||||||| |||||||||||| |||||  ||||||||||| ||||  ||||||||| |||||||||| | |  |||||||||||    
T  42501269 tattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaacattacagcgtcgtttaatccatgtagccgaccctacttagtgg 42501368  T
Q  229 gataaggcttggtt 242  Q
    ||||| | ||||||    
T  42501369 gataaagtttggtt 42501382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 52073156 - 52073059
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||| ||||||||| || ||||||||||||| | |  | |||| |||||||||||||||    
T  52073156 ctagagattaatgagctggatagggctatgatatatgatagaacattatggcggcgattgatccatgtagccgaccccacttggtgggataaggcttg 52073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 3818981 - 3818865
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| |  |||||||||| |||||| ||||| ||||| | |||||| ||| |||||| || | |||||||||||||| | | |  |||||    
T  3818981 aaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgatggaacattatgtcgccatttgatccatgtagccgactgcactta 3818882  T
Q  225 gtgggataaggcttggt 241  Q
    |||||||||||||||||    
T  3818881 gtgggataaggcttggt 3818865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 10569307 - 10569078
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaaga---- 117  Q
    ||||| ||||||||| | |||||||||||||| |||||| ||| | |||| ||  ||||||||||||||  ||||||| |||||| |||| ||| |        
T  10569307 aggtggtttgggcatgtagagagaagacctgtagattctgtagtacggagggtagattagatggagggtaatcaaatcactagaggcagaggaacacaaa 10569208  T
Q  118 ----attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
        || | | |||||||||||||| | |||||||||||  || |||||||| ||||  |||||||||||| |||||    || |||||||||||||| |    
T  10569207 aaaaataaaagaaactattaagaaagatctagagattaataagctggatagaaatatcgtatatgatagaacattataatatcatttgatccatgtagcc 10569108  T
Q  214 tattctacttagtgggataaggcttggttg 243  Q
      ||| |||||  |||||||||||||||||    
T  10569107 ggttccacttaaagggataaggcttggttg 10569078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 40920637 - 40920566
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
    ||||||||||| |||||||||||| ||||| |||||||||||| ||||||| ||| |||||| |||||||||    
T  40920637 ctagagattaatgagttggatagaaatatggtatatgatagaatattatggtgtcttttgattcatgtagtc 40920566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 16822145 - 16822038
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||| ||||||| |  |||||||||| ||| ||||||| ||||||||||||||| ||| ||||||||| | |||| ||||||||||| |  | |||||    
T  16822145 aaactagtaagaaagatgtagagattaatgagctggatagcgatatgatatatgattgaacattatggcggc-tttggtccatgtagtcgaccccactta 16822047  T
Q  225 gtgggataa 233  Q
    |||||||||    
T  16822046 gtgggataa 16822038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 41560404 - 41560504
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| |||||||||  | |||||   |||||||||| ||||||||||  |||||||||||||| | |  | |||||||||||||||||||||||    
T  41560404 tagagattaatgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggtt 41560503  T
Q  243 g 243  Q
    |    
T  41560504 g 41560504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 10585027 - 10584968
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatga 179  Q
    ||||||||||||||||||| | | ||||||||| |||||||| |||||||||||||||||    
T  10585027 tagaaaaactattaagaaagatccagagattaatgagttggacagagatatgatatatga 10584968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 16943355 - 16943430
Alignment:
Q  168 tatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| |  | || ||||| ||||| |||||||||    
T  16943355 tatgatatatgatagaacattatggcggcgtttgatccatgtagtcgaccccacctagtgagataatgcttggttg 16943430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 17233925 - 17233810
Alignment:
Q  96 aatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgt 195  Q
    |||| |||||| |||| |||||  ||||||||||||||||||| | | || |||||  |||||||||||  ||||| |||||||||||  |||||| |      
T  17233925 aatcactagaggcagaggaagacctagaaaaactattaagaaagatccagcgattattgagttggataggaatatggtatatgatagagcattatgtcag 17233826  T
Q  196 cgtttgatccatgtag 211  Q
    ||||||||||||||||    
T  17233825 cgtttgatccatgtag 17233810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 37591148 - 37591234
Alignment:
Q  122 gaaaaactattaagaaatac-ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||||   ||||| ||||||| ||||||  |||||||||||||||||    
T  37591148 gaaaaactattaagaaaaaatctagagattaatgagttggatagagat---atataagatagaacattatgatgtcgtttgatccatgta 37591234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 244
Target Start/End: Complemental strand, 43934455 - 43934336
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||  | ||| | |||||  ||||||| || ||||||||| ||||||||| ||||||||| |||||| |||||||||   |  | |||||    
T  43934455 aaactattaagaaggatctacaaattaattagttggaaagggatatgatagatgatagaacattatggcggcgtttgttccatgtagctaaccccactta 43934356  T
Q  225 gtgggataaggcttggttgc 244  Q
    ||||||||||| ||||||||    
T  43934355 gtgggataaggtttggttgc 43934336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 52921287 - 52921369
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtatttagg 257  Q
    |||||||||| | ||| ||||| |||||||||||||| | |  | ||||||||||||||||||||||||  ||||||||||||    
T  52921287 tatgatagaacactattgcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtatttagg 52921369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 853910 - 853825
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||||||||||  | ||||||||||  ||||||||||| || ||||||||||||||||  ||||||||  |||| |||||||||    
T  853910 aaactattaagaaggatctagagattagtgagttggatagggacatgatatatgatagaacgttatggcggagtttcatccatgta 853825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 25979327 - 25979238
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||| | |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  25979327 gagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 25979238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 363
Target Start/End: Complemental strand, 38877299 - 38877230
Alignment:
Q  294 ataataatgatttgaatggttgctgataatggtatggatgatgatgaagtaaattaattttcaatgggat 363  Q
    ||||| ||| ||||||||||||| |||||||| |||||||||||||| | |||||||||||  |||||||    
T  38877299 ataatgatgttttgaatggttgcagataatggaatggatgatgatgaggcaaattaatttttcatgggat 38877230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 52160419 - 52160301
Alignment:
Q  79 tagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactatta-agaaat----acctagagattaacgagttggatagagatatgat 173  Q
    |||||||||||| |||||||| |||||| || |||||||   ||||||||||| | |||||     | ||||| ||||||||||| |||||| |||||||    
T  52160419 tagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatctagaaattaacgagtttgatagaaatatgat 52160320  T
Q  174 atatgatagaaaattatgg 192  Q
    ||||||||||| |||||||    
T  52160319 atatgatagaatattatgg 52160301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 1210952 - 1211020
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  1210952 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 1211020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 6084150 - 6084250
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| |||||||||  | ||||| | |||||||||| | ||||||||  ||||||||||||| |  ||   |||||||||||||||||||||||    
T  6084150 tagagattaatgagttggatcaaaatatggtttatgatagaacaatatggcgtaatttgatccatgtatttgatctcacttagtgggataaggcttggtt 6084249  T
Q  243 g 243  Q
    |    
T  6084250 g 6084250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 17815636 - 17815751
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||| ||||| | |||| |||| | ||||| |||||| ||||| |||||||||||  ||| ||| ||||||||||||||||||   ||   |||||    
T  17815636 aaactatttagaaagatctagtgattgatgagttagatagaaatatggtatatgatagagcattttggtgtcgtttgatccatgtag---atctcactta 17815732  T
Q  225 gtgggataaggcttggttg 243  Q
    ||| |||||||||||||||    
T  17815733 gtgagataaggcttggttg 17815751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 27072594 - 27072494
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||| ||||| |||||||| ||| ||||| | |||||||||| ||||||||||  |||||||||||||| | |   | |||||||||| |||||||||||    
T  27072594 tagaaattaaagagttggacagaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccatgcttagtgggaaaaggcttggtt 27072495  T
Q  243 g 243  Q
    |    
T  27072494 g 27072494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 29577459 - 29577527
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  29577459 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 29577527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 30202205 - 30202137
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  30202205 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 30202137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 39525964 - 39526008
Alignment:
Q  167 atatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||    
T  39525964 atatgatagatgatagaatattatggcgtcgtttgatccatgtag 39526008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 40568485 - 40568417
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||| ||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  40568485 tatgatagaaaactatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttggttg 40568417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 43375809 - 43375605
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaa-aactattaagaaa 138  Q
    |||||||||||| | |||| | ||| || ||||||  || |||||| || | || ||||| |||||| |||| | |||  |||||| |||||||||||||    
T  43375809 gagagaagacctatagattatgtagtaaagagagtagatcagatggtggatagtaaaatcactagaggcagagggagacctagaaataactattaagaaa 43375710  T
Q  139 tacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 238  Q
     |  |||||||||| ||||||||  || ||||| |  ||||||||| |||||| | |  |||||||||||||| | || | |||||||||||||| | ||    
T  43375709 gatttagagattaatgagttggaccgaaatatggttcatgatagaacattatgacataatttgatccatgtagccaatcccacttagtgggataaagatt 43375610  T
Q  239 ggttg 243  Q
    |||||    
T  43375609 ggttg 43375605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 49347468 - 49347400
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  49347468 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 49347400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 51602263 - 51602331
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| || |||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  51602263 tatgatagaacatcatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttg 51602331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 17640197 - 17640074
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 219  Q
    |||||||||||| | |||  | ||||||||||| |||||||||| | ||||    | | |||||| |||||||||||||||||| ||||| ||| || |     
T  17640197 tagaaaaactataaggaaggatctagagattaatgagttggataaaaatattgcttgtaatagaacattatggcgtcgtttgattcatgttgtcaatcca 17640098  T
Q  220 acttagtgggataaggcttggttg 243  Q
    ||||||||||||||| ||| ||||    
T  17640097 acttagtgggataagacttagttg 17640074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 52482490 - 52482431
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttg 201  Q
    ||||||||||| |||||||| || ||||||||||||||| ||| ||||||||| ||||||    
T  52482490 ctagagattaatgagttggacagggatatgatatatgatggaacattatggcggcgtttg 52482431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 7124298 - 7124384
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||| ||||| | |||  |||||| || ||||||||| ||||| |||| ||||||  ||||||| ||||||||||||||||||    
T  7124298 aaactattgagaaagatctattgattaatgaattggatagaaatatggtataggatagagcattatggtgtcgtttgatccatgtag 7124384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 8203259 - 8203173
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| ||| | ||||||||||| ||||||||  ||| ||||||| | ||||||| |||||||||| | || ||||||||||    
T  8203259 aaactattaaaaaagatctagagattaatgagttggacggaggtatgatagaagatagaacattatggcgttgatttatccatgtag 8203173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 30017182 - 30017092
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||||||| ||||  ||| ||||||| ||||| ||||| ||||||||||  ||||  || |||| ||||||| |||||||||||||||||    
T  30017182 tagaaaaaccattagtaaagacctagatattaatgagttagatagagataccatatccgacagaacattatggtgtcgtttgatccatgta 30017092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 42337763 - 42337841
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtatt 253  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||||||  ||||||||    
T  42337763 tatgatagaacactatggcatcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgtatt 42337841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 15086108 - 15086197
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||||| | |||||||| | |||| |||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  15086108 gagttggatccaaatatgatttttgatagaacactatgacgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttg 15086197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 52814350 - 52814301
Alignment:
Q  194 gtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||||||||| |||| | |||||||||| |||||||||||||    
T  52814350 gtcgtttgatccatgtagcctatcccacttagtgggttaaggcttggttg 52814301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 28090769 - 28090701
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||| ||||||||    
T  28090769 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttg 28090701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 34792424 - 34792356
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||| ||||||||||||||||||    
T  34792424 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttg 34792356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 37462947 - 37462883
Alignment:
Q  179 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  37462947 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 37462883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 38807770 - 38807678
Alignment:
Q  151 aacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||||  | ||||| | |||||||||| | ||||||||  |||| ||||||||| | |  | ||||||||||||||||||||||||    
T  38807770 aacgagttggatccaaatatggtttatgatagaacactatggcgtaatttgttccatgtagccgaccccacttagtgggataaggcttggttg 38807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 39797212 - 39797272
Alignment:
Q  179 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||| ||||||||||| |||||| |||||| || |||| ||||||||| ||||||||||    
T  39797212 atagaacattatggcgtcatttgattcatgtaatcaattccacttagtggaataaggcttg 39797272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 44941851 - 44941783
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  44941851 tatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 44941783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 2545192 - 2545145
Alignment:
Q  157 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatc 204  Q
    ||||| || ||||||||||||||||||| ||||||| |||||||||||    
T  2545192 ttggagagggatatgatatatgatagaacattatggtgtcgtttgatc 2545145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 12135864 - 12135943
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatga-tatatgatagaaaattatggcgtcgtttgat 203  Q
    |||||||||||||| | ||||||||||| ||||||||||||  ||| | | |||||||||  ||||||| ||||||||||    
T  12135864 aaactattaagaaaaatctagagattaatgagttggatagaattataattttatgatagagcattatggggtcgtttgat 12135943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 12231524 - 12231571
Alignment:
Q  127 actattaagaaatacctagagattaacgagttggatagagatatgata 174  Q
    |||||||||||| | || |||||||| |||||||||||||||||||||    
T  12231524 actattaagaaagatctcgagattaatgagttggatagagatatgata 12231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 21769784 - 21769709
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtat 252  Q
    |||||||| ||||||||||  |||||||||||||| | |  | |||||||| |||||||||||||||  |||||||    
T  21769784 tgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgtgataaggcttggttgttgttgtat 21769709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 22319931 - 22319856
Alignment:
Q  158 tggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataa 233  Q
    ||||||||||||||||||| ||||||| || |||| ||||||| || |||| || | || | ||||||||||||||    
T  22319931 tggatagagatatgatatacgatagaatatcatggtgtcgtttaatacatgcagccgatcccacttagtgggataa 22319856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 40416528 - 40416595
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatgg 192  Q
    |||||||||||||| | ||| ||||||| ||||||||| || ||||| | |||||||||| |||||||    
T  40416528 aaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattatgg 40416595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 48861485 - 48861391
Alignment:
Q  142 ctagagattaacgagttggatagagatatg--atatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 234  Q
    ||||||||||| |||||||||||| |||||  |||| |||||||  |||||| ||||||||||| ||||| | | |  | |||||||||||||||    
T  48861485 ctagagattaatgagttggatagaaatatggtatatttgatagagcattatgacgtcgtttgattcatgtcgccgaccccacttagtgggataag 48861391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 9599519 - 9599433
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||| ||||||  ||||| |||| ||||| |||  ||||||| | ||||||||||  |||||||||  ||||||||||||||    
T  9599519 aaactattaggaaatatttagagtttaatgagtttgatccagatatggtttatgatagaacgttatggcgtaatttgatccatgtag 9599433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 28528512 - 28528598
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||  | ||||||||||| |||||||| | ||| ||| | | |||||||  | |||||||||||||||| |||||||    
T  28528512 aaactattaagaaggatctagagattaatgagttggagaaagacatggtttttgatagaccactatggcgtcgtttgattcatgtag 28528598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 37311828 - 37311762
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||| ||||||||||||    
T  37311828 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttg 37311762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 39515993 - 39515907
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| ||||||| ||||| |||||||||  | |||||   |||| ||||| |||||||| | |||||||| ||||||    
T  39515993 aaactattaagaaaaacctagaaattaatgagttggatcaaaatatggattatggtagaacattatggcattgtttgatctatgtag 39515907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 52532741 - 52532623
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||| |||| |  |||| ||||| ||||||||   | ||||| | |||||||||| ||||||||||  |||||| ||||||| | |  | |||||    
T  52532741 aaactattaggaaagatttagaaattaatgagttggaacaaaatatggtttatgatagaacattatggcgtaatttgattcatgtagccgaccccactta 52532642  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||| ||||||||||||    
T  52532641 gtgggaaaaggcttggttg 52532623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 2544641 - 2544749
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||| ||| | |||||||||||| | |||||||||| |||||||||  || ||||||||| | |||||| | ||||||  ||| |||||  ||    
T  2544641 aggtggtttggacatgtagagagaagacctatagattctatagtaaggagagtagatcagatggaggatagtcaaa-cactagaggtagaggaagaccta 2544739  T
Q  122 gaaaaactat 131  Q
    ||||||||||    
T  2544740 gaaaaactat 2544749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 2914187 - 2914130
Alignment:
Q  186 attatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  2914187 attatggcgtactttgatccatgtagccaaccccacttagtgggataaggcttggttg 2914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 24020347 - 24020274
Alignment:
Q  170 tgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||| |||||||||| | ||||||||| ||||||||||| || | |  | |||| |||||||||||||||||||    
T  24020347 tgatttatgatagaacactatggcgtcatttgatccatgcagccaaccccactttgtgggataaggcttggttg 24020274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 37430484 - 37430427
Alignment:
Q  186 attatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||||||| ||| | || | |||||||| |||||||||||||||    
T  37430484 attatggcgtagtttgatccatatagccgatcccacttagtgagataaggcttggttg 37430427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 41165500 - 41165557
Alignment:
Q  186 attatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||| |||||||||||||| | |  | ||||||||||| ||||||||||||    
T  41165500 attatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttg 41165557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 9592941 - 9593009
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||| ||||| |||||||||||||| | |  | ||||| ||||||||||||||||||    
T  9592941 tatgatagaacactatagcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttg 9593009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 19908142 - 19908046
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||||| |||||||||  | ||||| | |||||| ||| ||||| ||||  ||| |||||||||| | |  | ||||||||||||||||||||    
T  19908142 tagagattaatgagttggattcaaatatggtttatgattgaacattattgcgtaattttatccatgtagccgaccccacttagtgggataaggcttg 19908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 22090303 - 22090371
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||| |||| |||||||||||||| | |  | ||| ||||||||||||||||||||    
T  22090303 tatgatagaacactatgacgtcatttgatccatgtagccgaccccactaagtgggataaggcttggttg 22090371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 28533674 - 28533742
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||| |||| |||||||||||||| | |  | ||||||||||||||| ||||||||    
T  28533674 tatgatagaacactatgacgtcatttgatccatgtagccgaccccacttagtgggataagacttggttg 28533742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 34444531 - 34444631
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| |||||||||  | ||||| | ||| ||| || ||||||| ||  ||||||| |||||| | |  | |||||||||||||||||||||||    
T  34444531 tagagattaatgagttggatccaaatatggtttataataaaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggtt 34444630  T
Q  243 g 243  Q
    |    
T  34444631 g 34444631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 52292246 - 52292314
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||||||| | ||  |||||||||||||  | |  | ||||||||||||||||||||||||    
T  52292246 tatgatagaaaattattgagtaatttgatccatgtaaccaaccccacttagtgggataaggcttggttg 52292314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 46431804 - 46431686
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||| ||| | ||||||||||| ||||||||||||||||| ||||||||| ||| |||  ||||||||||||||||||| | | |  | |||||    
T  46431804 aaactattaaaaaagatctagagattaatgagttggatagagatattatatatgatggaacattgaggcgtcgtttgatccatgtcgccaaccccactta 46431705  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  46431704 gtgggataaggcttggttg 46431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 21427707 - 21427591
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| ||||||||||  | ||||||||||||||| |||| ||||| |    ||| |||||||||||||||||||||||| || |||||||    
T  21427707 aaactattaagaaagacctagagat--atgagttggatagagatttgatttatgacaaggcattgtggcgtcgtttgatccatgtagtcaatcctactta 21427610  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||| ||||||||    
T  21427609 gtgggataagacttggttg 21427591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 37228239 - 37228321
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 207  Q
    |||||||||||||| || |||| |||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||    
T  37228239 aaactattaagaaagacttagaaattaacgagttggataaagatatgataaatggtagaacattatggcgtcgtttgatccat 37228321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 43308719 - 43308836
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | |||||||||||  |||||||||||||||||||||||||||||| || || ||| || ||||||||||||| | |  | ||||     
T  43308719 aaactattaagaaaaatctagagattaatcagttggatagagatatgatatatgatagaacataattgcgccggttgatccatgtagccaaccccacttt 43308818  T
Q  225 gtgggataaggcttggtt 242  Q
    ||||||| ||||||||||    
T  43308819 gtgggatgaggcttggtt 43308836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 37598295 - 37598207
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
    |||||||||||| ||| ||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||| |||||  |||||||||    
T  37598295 aaactattaagatatatctagagattaatgagttggataggggtatgatatatgatagaacattatggcgtcatttgactcatgtagtc 37598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 211
Target Start/End: Original strand, 36304027 - 36304209
Alignment:
Q  29 ttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaac 128  Q
    |||||||| | |||||||||||||| ||| || ||| ||||||| |  || |||| |||||| |||| ||  |||||| ||| || |||  ||| |||||    
T  36304027 ttgggcatgtagagagaagacctgtagatgctttagtaaggagaatagatcagatagagggtagtcagattactagaggcagttgtagacctagtaaaac 36304126  T
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| | ||||||||||| |||||||||  | ||||| | |||||||| | ||||||||||  ||||||||||||||    
T  36304127 tattaagaaagatctagagattaatgagttggatcaaaatatggtttatgataggacattatggcgtaatttgatccatgtag 36304209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 46367495 - 46367394
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    |||||||| || ||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||| |||  | ||||| | |||||| |||||||    
T  46367495 ctagagatgaatgagttggataaggatatgatatatgatagaacattatgacgtcgtttgatccatgtagcctaccccacttaattggataaagcttggt 46367396  T
Q  242 tg 243  Q
    ||    
T  46367395 tg 46367394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 55244441 - 55244518
Alignment:
Q  131 ttaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 208  Q
    |||||||| | ||||||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||    
T  55244441 ttaagaaaaatctagagattaatgagttggatagaaatatggtatatgatagaacattatggtgtcgtttgatccatg 55244518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 29475843 - 29475973
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||||||||| ||||||||| || ||||  | |||||||||||| ||||||||  ||||| |||| ||| | | || | |||    
T  29475843 aaactattaagaaagatctagagattaatgagttggattgaaatattgtttatgatagaaaactatggcgtaatttgacccatctagccaactccagtta 29475942  T
Q  225 gtgggataaggcttggttgcggttgtattta 255  Q
    ||||||||||| |||||||  ||||||||||    
T  29475943 gtgggataaggtttggttgttgttgtattta 29475973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 37228085 - 37228167
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 207  Q
    |||||||||||||| || |||| ||||| ||||| |||| |||||||||| ||| ||||| ||||||||||||||||||||||    
T  37228085 aaactattaagaaagacttagaaattaatgagttagataaagatatgataaatggtagaacattatggcgtcgtttgatccat 37228167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 659703 - 659800
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| ||||||||||| ||||| ||||||||||||| ||||||||   ||||||||||||||| | |  | |||||||||| |||||||||||||    
T  659703 agattaatgagttggatagggatattatatatgatagaacattatggcagtgtttgatccatgtagccgaccccacttagtggggtaaggcttggttg 659800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 2340842 - 2340710
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||||||||| |||| ||| || |  |||||||||||||||| |||||||||| |||||||||||| || | |  | |||||    
T  2340842 aaactattaagaaagatctagagattaatgagtcggagagggtaatgatatatgatagaacattatggcgttgtttgatccatgaagccaaccccactta 2340743  T
Q  225 gtgggataaggcttggttgcggttgtatttagg 257  Q
    || | |||||| |||||||  ||||||| ||||    
T  2340742 gttgtataaggattggttgttgttgtatatagg 2340710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 41971376 - 41971278
Alignment:
Q  144 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| |||||| | ||| |||||||||||||||||| |||||| ||| ||||||||||||||| | | || ||||||| ||||||||||| ||||    
T  41971376 agagattaatgagttgtacagaaatatgatatatgatagaacattatgacgttgtttgatccatgtagccaactccacttagt-ggataaggctttgttg 41971278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 29337698 - 29337573
Alignment:
Q  121 agaaaaactattaagaaatacctagagattaacgagttggata--gagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattc 218  Q
    ||||||||||| |||||| || | |||||||| ||||||||||  ||||||||||||||||  ||| |||||  ||||||||| ||||||||| | || |    
T  29337698 agaaaaactataaagaaagacttcgagattaatgagttggatatagagatatgatatatgacggaatattatatcgtcgtttggtccatgtagccgatcc 29337599  T
Q  219 tacttagtgggataaggcttggttgc 244  Q
    |||||| ||||| || | ||||||||    
T  29337598 tacttaatgggacaaagtttggttgc 29337573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 39535570 - 39535440
Alignment:
Q  81 gatggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagatt-aacgagttggatagagatatgatatatga 179  Q
    ||||||| || |||||||| |||||| |||| | ||| |||| ||||||||||||||  | |||| | |  || ||||||||||  ||||||||||||||    
T  39535570 gatggagagtagtcaaatcactagaggcagaagtagacttagtaaaactattaagaaggatctagtgttgcaatgagttggataaggatatgatatatga 39535471  T
Q  180 tagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||| ||||||| | |||||||||||||||    
T  39535470 tagaacattatggtggcgtttgatccatgta 39535440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 23534695 - 23534607
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
    ||||||||| |||| || |||||||||| ||||||||  |  ||||||| |||||||||| ||||||||||  ||||||||||||||||    
T  23534695 aaactattaggaaagacttagagattaatgagttggactgtaatatgatttatgatagaacattatggcgtaatttgatccatgtagtc 23534607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 27893246 - 27893364
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||| ||  ||||||||||||| |||||||| | ||| ||||| | ||| |||| | |||||| | ||||||| ||||||| | || | |||||    
T  27893246 aaactattaaaaaggacctagagattaatgagttggagaaagacatgatttttgaaagaacactatggcattgtttgattcatgtagccgatcccactta 27893345  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||| ||||    
T  27893346 gtgggataaggctttgttg 27893364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 49841773 - 49841859
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| ||| | ||| ||||||| ||||||||| || ||||| |||||||||||| |||||||| |  ||||||||||||||    
T  49841773 aaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaacattatggcataatttgatccatgtag 49841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 41425463 - 41425378
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||||||| ||| |  |||| ||||| ||||||||||| ||| || |||||||||||| ||||||  |||||||||||||||||    
T  41425463 aaactattaaaaaacatttagatattaatgagttggatagggatgtgctatatgatagaatattatgatgtcgtttgatccatgta 41425378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 11284163 - 11284231
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| |||||||||| | ||||| |||||||| ||| ||||| || |||||||||||||||||    
T  11284163 tagagattaatgagttggatataaatatggtatatgattgaacattattgcatcgtttgatccatgtag 11284231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 12096780 - 12096712
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  12096780 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 12096712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 19758039 - 19758158
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 219  Q
    |||||||||||||| ||||||  |||||||||| |||||||||    ||||| | |||||||||| |||||||  |  |||||||||||||| | |  |     
T  19758039 tagaaaaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgatagaacattatggtataatttgatccatgtag-cgacccc 19758137  T
Q  220 acttagtgggataaggcttgg 240  Q
    |||||||||||||||||||||    
T  19758138 acttagtgggataaggcttgg 19758158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 32052501 - 32052433
Alignment:
Q  144 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagt 212  Q
    ||||| ||| |||||| ||||||||||||| |||||||||| ||||| ||||| |||| ||||||||||    
T  32052501 agagactaatgagttgaatagagatatgatgtatgatagaacattattgcgtcatttggtccatgtagt 32052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 47555407 - 47555339
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  47555407 tatgatagaacactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttg 47555339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 5852397 - 5852346
Alignment:
Q  157 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 208  Q
    ||||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  5852397 ttggatagaaatatgatatatgatagagtattatgacgtcgtttgatccatg 5852346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 5169041 - 5169107
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  5169041 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 5169107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 45289216 - 45289098
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||| |||| |  |||||||||| |||||||||  | ||||| | |||||||||| ||||| || |  |||||||||||| | | |  | |||||    
T  45289216 aaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgatagaacattatagcataatttgatccatgtcgccaaccccactta 45289117  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  45289116 gtgggataaggcttggttg 45289098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 48508421 - 48508510
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||| | |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  48508421 gagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 48508510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 49503632 - 49503575
Alignment:
Q  186 attatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||  |||||||||||||| | |  ||||||||||||||||||||||||||    
T  49503632 attatggcgtaatttgatccatgtagccgaccctacttagtgggataaggcttggttg 49503575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 311404 - 311316
Alignment:
Q  155 agttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||  ||||||| | | |||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||||||    
T  311404 agttggatccagatatggtttttgatagaacactatggcgtcatttgatacatgtagccgaccccacttagtgggataaggcttggttg 311316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 388369 - 388269
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| ||||  |||||| ||| | |||||||||||  |||||| |||  ||||||| |||||| | |  | |||||||||||||||||||||||    
T  388369 tagagattaatgagtaagatagaaatacggtatatgatagagcattatgacgtaatttgatcaatgtagccaaccccacttagtgggataaggcttggtt 388270  T
Q  243 g 243  Q
    |    
T  388269 g 388269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 2133687 - 2133619
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||  ||||||||||||| || |  | ||||||||||||||||||||||||    
T  2133687 tatgatagaacactatggcgtgatttgatccatgtactcgaccccacttagtgggataaggcttggttg 2133619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 6988075 - 6988177
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatg--atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||||||||| |||||||||||| ||||| ||||||  |||||  ||||||||||| ||||||| |||||| | | ||   |||||||||||||||||     
T  6988075 ctagagattaatgagttggataga-atatggtatatgatatagatcattatggcgtcatttgatcaatgtagccgactccttttagtgggataaggctta 6988173  T
Q  240 gttg 243  Q
    ||||    
T  6988174 gttg 6988177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 7895955 - 7895887
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||| ||||||||||||||||||    
T  7895955 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttg 7895887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 7942864 - 7942924
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 238  Q
    ||||||| ||||||| || ||| ||||||||||||| || | |||||||||||||||||||    
T  7942864 gatagaacattatggtgttgttcgatccatgtagtcgataccacttagtgggataaggctt 7942924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 21200698 - 21200787
Alignment:
Q  118 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 209  Q
    |||||| |||||||| ||||| | ||||| ||||| |||||||||||| |||||   ||| |||||  |||||||||||||||||| |||||    
T  21200698 attagacaaactatttagaaagatctagatattaatgagttggatagaaatatg--gtattatagagcattatggcgtcgtttgatgcatgt 21200787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 31566234 - 31566158
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtatt 253  Q
    |||||||| | ||||| ||| |||||||||||||| | |  | ||||||||||||||||||||||||  ||||||||    
T  31566234 tgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtatt 31566158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 47789003 - 47789135
Alignment:
Q  82 atggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttgg--atagagatatg----atat 175  Q
    ||||||||| || |||||   ||||||||| ||||| |||||||||||||||||||| | ||| | |||||  ||||||  |||||||||||    ||||    
T  47789003 atggagggtagtgaaatcaaaagagacagaggaagacttagaaaaactattaagaaaaatctatatattaataagttggatatagagatatgttatatat 47789102  T
Q  176 atgatagaaaattatggcgtcgtttgatccatg 208  Q
    |||||||||  ||||| ||| ||||| ||||||    
T  47789103 atgatagaacgttatgacgttgtttggtccatg 47789135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 47804788 - 47804720
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggc 193  Q
    |||| ||||||||| |  |||||||||| |||||| ||||||| ||| |||||||||||| ||||||||    
T  47804788 aaacgattaagaaagatttagagattaatgagttgaatagagacatgctatatgatagaacattatggc 47804720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 54128586 - 54128654
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| |||||||| |  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  54128586 tatgatagaacattatggcataatttgatccatgtaggcgaccccacttagtgggataaggcttggttg 54128654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 7278653 - 7278748
Alignment:
Q  157 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtat 252  Q
    |||||| | |||||||||||| |||||| |||||  |||| |||||||||||||| | |  | |||||||||||||| |||| ||||  |||||||    
T  7278653 ttggatcgggatatgatatattatagaacattataacgtcatttgatccatgtagccgaccccacttagtgggataaagcttagttgttgttgtat 7278748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 21862843 - 21862752
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||| || ||||||||| |||||||||  ||||||| | ||||| ||| |||||||||||||| | |  | |||||||| |||||||||||    
T  21862843 attaatgaattggatagaaatatgatattggatagaagaatatggtgtcatttgatccatgtagccgaccccacttagtgagataaggcttg 21862752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 33307188 - 33307247
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatc 99  Q
    |||||||||| ||| |||||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  33307188 gagagaagacatgtagattctataggaagaagagtaaatcagatggagggtagtcaaatc 33307247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 45834662 - 45834607
Alignment:
Q  188 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  45834662 tatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttg 45834607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 50237760 - 50237673
Alignment:
Q  124 aaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||||||||| |   ||||||||  |||||||||||| ||||  |||||||||||| ||||  ||  ||||||||||||||||    
T  50237760 aaaactattaagaaagattcagagattattgagttggatagaaatattgtatatgatagaacattactgctccgtttgatccatgtag 50237673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 8476137 - 8476067
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgt 195  Q
    ||||| |||||||| | ||| |||||||  | ||||||||||||||| |||||||||||  ||||||||||    
T  8476137 aaacttttaagaaagatctaaagattaataatttggatagagatatggtatatgatagagtattatggcgt 8476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 25191586 - 25191652
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| ||||||||||||||   || | |||||||||||||| |||||||||    
T  25191586 tgatagaacactatggcgtcatttgatccatgtagctgatcccacttagtgggataatgcttggttg 25191652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 34719205 - 34719127
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 203  Q
    ||||||||| || | | ||||| ||||| || |||||| |||||| |||||||||||||  |||||||| |||||||||    
T  34719205 aaactattaggacaaatctagaaattaatgatttggattgagatacgatatatgatagagcattatggcttcgtttgat 34719127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 45468792 - 45468850
Alignment:
Q  185 aattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||||||||||| |||||  | || | ||||||||| ||||||||||||||    
T  45468792 aattatggcgtcgtttgatctatgtaaccgatcccacttagtggaataaggcttggttg 45468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 53262350 - 53262416
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| ||||||| |||||| | |  | ||||||||||||||||||||||||    
T  53262350 tgatagaacactatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttggttg 53262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 32170579 - 32170680
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    |||||||||||  ||||||||||| ||||| | ||||||| || |||||| | |  |||||||||||||| | |  | |||||||| ||||| |||||||    
T  32170579 ctagagattaataagttggatagaaatatggtctatgatataacattatgacataatttgatccatgtagccgaccccacttagtgagataaagcttggt 32170678  T
Q  242 tg 243  Q
    ||    
T  32170679 tg 32170680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 41452865 - 41452816
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgata 174  Q
    |||||||||||||| | ||||||||||| |||||||||| | ||||||||    
T  41452865 aaactattaagaaagatctagagattaatgagttggataaatatatgata 41452816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 46140581 - 46140682
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| ||||| |||||| ||||    || ||||||| ||||||| || ||||||||||||||||| |  | |||| ||| ||||||| |||||    
T  46140581 ctagagattaatgagtttgatagaaatatagcttacgatagaacattatggagttgtttgatccatgtagtcgaccccactttgtgagataaggtttggt 46140680  T
Q  242 tg 243  Q
    ||    
T  46140681 tg 46140682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 48532164 - 48532233
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatcca-tgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| ||||||||| ||||| | |  | ||||||||||||||||||||||||    
T  48532164 tatgatagaacactatggcgtcatttgatccaatgtagccgaccccacttagtgggataaggcttggttg 48532233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 52156180 - 52156091
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||| | |||||||||| | ||||||||| | |||||||||||| | |  | |||||||||||||||||| |||||    
T  52156180 gagttggatccaaatatggtttatgatagaacactatggcgtcatctgatccatgtagccgaccccacttagtgggataaggctcggttg 52156091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 40106721 - 40106617
Alignment:
Q  149 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggtt 248  Q
    |||| |||||||||  | ||||| | |||||||||| |||||| | |  ||||||| |||||||  |  | ||||||||||||||||||||||||  |||    
T  40106721 ttaatgagttggatccaaatatggtttatgatagaacattatgacataatttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgtt 40106622  T
Q  249 gtatt 253  Q
    |||||    
T  40106621 gtatt 40106617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 41842652 - 41842560
Alignment:
Q  121 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
    ||||||||||| |||| | | |||||| |||| ||||| ||| || ||||| | | |||||||| ||||||| ||  ||||||||||||||||    
T  41842652 agaaaaactataaagatagatctagaggttaatgagttagattgaaatatggtttttgatagaacattatggtgtaatttgatccatgtagtc 41842560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 42026639 - 42026591
Alignment:
Q  147 gattaacgagttggatagagatatgatatatgatagaaaattatggcgt 195  Q
    |||||| ||||| |||||| ||||| |||||||||||| ||||||||||    
T  42026639 gattaatgagttagatagaaatatggtatatgatagaacattatggcgt 42026591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 46148235 - 46148303
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||  ||||||||||||    
T  46148235 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggtcaaggcttggttg 46148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 47233669 - 47233593
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtatt 253  Q
    |||||||| | ||||||||| |||||| ||||||| | |  | | ||||||||||||||||||||||  ||||||||    
T  47233669 tgatagaacactatggcgtcatttgattcatgtagccgaccccagttagtgggataaggcttggttgttgttgtatt 47233593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 50960744 - 50960644
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| |||||||||  | ||||| | ||| |||||  ||||||| ||  |||||||||| ||| | |  | |||||||||||||||||||||||    
T  50960744 tagagattaatgagttggatccaaatatggtgtatcatagaccattatggtgtaatttgatccatttagccaaccccacttagtgggataaggcttggtt 50960645  T
Q  243 g 243  Q
    |    
T  50960644 g 50960644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 52139007 - 52139075
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||| |||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  52139007 tatgatagaacactatgacgttatttgatccatgtagccgaccccacttagtgggataaggcttggttg 52139075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 52882728 - 52882660
Alignment:
Q  184 aaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtat 252  Q
    ||||||||||||  |||||||||||||| | |  | ||||||||||| ||||||||||||  |||||||    
T  52882728 aaattatggcgtaatttgatccatgtagccaaccccacttagtgggagaaggcttggttgttgttgtat 52882660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 25574 - 25450
Alignment:
Q  120 tagaaaaactattaagaaat-acctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattc 218  Q
    ||||||||||||||| |||| |  |||||||||| |||||||||||| ||| | ||||||||| || |||||||| |||||||||| |||||||| || |    
T  25574 tagaaaaactattaaaaaatgatttagagattaatgagttggatagaaataagttatatgataaaacattatggcttcgtttgatctatgtagtcaatcc 25475  T
Q  219 tacttagtgggataaggcttggttg 243  Q
     |||| |||||||||||||||||||    
T  25474 cactttgtgggataaggcttggttg 25450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 6293626 - 6293392
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagat---gaagaa 118  Q
    ||||| ||||||||| | ||||||| |||||| |||| | ||  ||||||||| ||| ||||| ||| | |||||||| ||||||  ||||   ||| ||    
T  6293626 aggtggtttgggcatgtagagagaacacctgtagattatgtaataaggagagtaaatcagatgaaggatagtcaaatcactagaggaagatctagaaaaa 6293527  T
Q  119 ttagaa---aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtcta 215  Q
     || ||   ||||||||| |||||| ||||| ||||| ||||| |||||| ||||| |||||||||||  ||||||||  |||||| || |||||| | |    
T  6293526 ctaaaatagaaactattaggaaatatctagatattaatgagttagatagaaatatggtatatgatagagcattatggcaacgtttggtcaatgtagccga 6293427  T
Q  216 ttctacttagtgggataaggcttggttgcggttgt 250  Q
      | |||||||||||||||||||||||||||||||    
T  6293426 ccccacttagtgggataaggcttggttgcggttgt 6293392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 250
Target Start/End: Complemental strand, 1748077 - 1747946
Alignment:
Q  118 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctatt 217  Q
    |||||| |||||| ||||||| |  |||||||||| |||||||||||| ||||  |||||||||||| |||| | |||||||||||||||||||| |       
T  1748077 attagagaaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaacattacgacgtcgtttgatccatgtagt-tgac 1747979  T
Q  218 ctacttagtgggataaggcttggttgcggttgt 250  Q
    |||||| ||| |||||| ||||||||| |||||    
T  1747978 ctacttggtgcgataagacttggttgctgttgt 1747946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 33997669 - 33997590
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatc 204  Q
    ||||||||||||||  |||||||||||| |||||||||||| ||||| || ||||| ||| ||||||||||| |||||||    
T  33997669 aaactattaagaaaagcctagagattaatgagttggatagaaatatggtacatgattgaacattatggcgtcatttgatc 33997590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 34630 - 34512
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||| ||||||||| | ||| ||||||| ||||||||| || ||||| | |||||||||| ||||||||||  ||||||||||||||   |  | |||||    
T  34630 aaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccactta 34531  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||| ||||||||    
T  34530 gtgggataagacttggttg 34512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 7150432 - 7150318
Alignment:
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 228  Q
    |||||||||| ||||| ||||||| |||||  ||| |||||| |||||||| | || |||||||||| | ||||||||||||| | |  |||  ||||||    
T  7150432 tattaagaaagacctatagattaatgagttaaatatagatattatatatgacataacattatggcgttggttgatccatgtagccgagcctatgtagtgg 7150333  T
Q  229 gataaggcttggttg 243  Q
    ||| |||||||||||    
T  7150332 gattaggcttggttg 7150318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 30789147 - 30789081
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | |||| |||| |||||||||||||| | || ||||||||||||||||||||||||||    
T  30789147 tgatagaacactatgacgtcatttgatccatgtagccgatcctacttagtgggataaggcttggttg 30789081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 34143840 - 34143772
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||||| |  | ||||| ||||||||||||||||||    
T  34143840 tatgatagaacactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttggttg 34143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 34156456 - 34156388
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||||| |  | ||||| ||||||||||||||||||    
T  34156456 tatgatagaacactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttggttg 34156388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 4245966 - 4245879
Alignment:
Q  156 gttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||| ||| |||||||| |||||| | |||||||||||| |||| | |  | ||||||||||||||||||||||||    
T  4245966 gttggataaaaatatggtatttgatagaacattatgacatcgtttgatccaagtagccgaccccacttagtgggataaggcttggttg 4245879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 5096015 - 5096118
Alignment:
Q  149 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggtt 248  Q
    |||| |||||||||  | ||||| | |||||||||| ||||||||||  ||||||| |||||| | || | |||||||||||||||| |||||||  |||    
T  5096015 ttaatgagttggatcaaaatatggtttatgatagaacattatggcgtaatttgatctatgtagccgatcccacttagtgggataaggtttggttgttgtt 5096114  T
Q  249 gtat 252  Q
    ||||    
T  5096115 gtat 5096118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 31819038 - 31819113
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgt 250  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||| ||||||||| ||||||    
T  31819038 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataatgcttggttgtggttgt 31819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 32945428 - 32945491
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||| ||||| |||||| ||||  |||||||||||| ||||||| ||||||||||||||||||    
T  32945428 attaatgagttagatagaaatattttatatgatagaacattatggtgtcgtttgatccatgtag 32945491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 3963967 - 3964025
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatc 204  Q
    ||||||| ||||| |||||||||| |||||||||||||| |||| ||||| ||||||||    
T  3963967 agattaatgagtttgatagagatacgatatatgatagaacattacggcgttgtttgatc 3964025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 9706945 - 9707055
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    ||||| |||| |||||||||  | ||||| | | |||||||| | |||||| || |||||||||||||| | |  | |||||||||||||||||||||||    
T  9706945 tagaggttaatgagttggatccaaatatggtttttgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggtt 9707044  T
Q  243 gcggttgtatt 253  Q
    |  ||||||||    
T  9707045 gttgttgtatt 9707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 26676435 - 26676373
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||| ||||||||||| |||||| ||||| |||||| ||||||||| | |||||||||||||    
T  26676435 attaatgagttggatagggatatgctatattatagaacattatggcggcatttgatccatgta 26676373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 26677615 - 26677553
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||| ||||||||||| |||||| ||||| |||||| ||||||||| | |||||||||||||    
T  26677615 attaatgagttggatagggatatgctatattatagaacattatggcggcatttgatccatgta 26677553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 3210616 - 3210547
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||||| ||||||||| || ||||||  |||||||||| ||||||| ||  ||||||||||||||    
T  3210616 ctagagattaatgagttggatggaaatatgagttatgatagaacattatggtgtaatttgatccatgtag 3210547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 12890782 - 12890850
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  12890782 tatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 12890850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 28085583 - 28085651
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||| ||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  28085583 tatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 28085651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 34934905 - 34934837
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||||||    
T  34934905 tatgatagaacactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 34934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 35199747 - 35199680
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggc 193  Q
    ||||||||| |||| | ||||||||||| ||||| |||||| ||||| |||||||||||| ||||||||    
T  35199747 aaactattaggaaagatctagagattaatgagttagatagaaatatg-tatatgatagaacattatggc 35199680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 1747842 - 1747775
Alignment:
Q  61 atagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaac 128  Q
    |||| ||||||||||  ||||||||||||| ||||||| ||||||| |||| |||||  |||||||||    
T  1747842 atagtaaggagagtggcttagatggagggtagtcaaatttctagaggcagaggaagacctagaaaaac 1747775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 32515449 - 32515390
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttg 201  Q
    ||||||||||| ||||||||||||||||||| |||| || ||| |||||| ||| |||||    
T  32515449 ctagagattaatgagttggatagagatatgaaatattattgaatattatgccgttgtttg 32515390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 608370 - 608436
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | |||| |||| |||||||||||||| | |  ||||||||||||||||| ||||||||    
T  608370 tgatagaatactatgacgtcatttgatccatgtagccgaccctacttagtgggataagacttggttg 608436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 7267514 - 7267424
Alignment:
Q  121 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||| ||||| | |||| |||   |||| |||||| | ||||||||||||||  || ||||||  ||||||||||||||||||    
T  7267514 agaaaaactatttagaaagatctagcgatagccgaggtggataaaaatatgatatatgatgcaacattatgatgtcgtttgatccatgtag 7267424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 9749401 - 9749315
Alignment:
Q  85 gagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatg 171  Q
    |||||| ||||||||  ||||| |||| |||||  ||||||||||||||||||| | ||||||  ||||| | ||||||| ||||||    
T  9749401 gagggtagtcaaatcattagaggcagaggaagatctagaaaaactattaagaaaaatctagagcataacgtgctggatagggatatg 9749315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 12237895 - 12237861
Alignment:
Q  173 tatatgatagaaaattatggcgtcgtttgatccat 207  Q
    |||||||||||||||||||| ||||||||||||||    
T  12237895 tatatgatagaaaattatggtgtcgtttgatccat 12237861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 579632 - 579693
Alignment:
Q  182 gaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||||||  ||||||| |||||| | || | |||||||||||||| |||||||||    
T  579632 gaaaattatggcgtaatttgatctatgtagccgatcccacttagtgggataaagcttggttg 579693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 1747749 - 1747712
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatga 179  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  1747749 ctagagattaatgagttggataaagatatgatatatga 1747712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 6906951 - 6906866
Alignment:
Q  127 actattaagaaatacctagagattaacgagttggatagagatatgatatatgata-gaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||| | ||||| |||||||||||||||| | | ||| |||| |||| ||| ||||||  |||| |||||||||||||    
T  6906951 actattaagaaagatctagatattaacgagttggatataaaaatgttataagataggaacattatgatgtcgattgatccatgtag 6906866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 32756128 - 32756193
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttgg 240  Q
    |||||||||| | ||||||||| |||||||||||||| | || | |||||||||| |||| |||||    
T  32756128 tatgatagaacactatggcgtcatttgatccatgtagccgatcccacttagtggggtaagacttgg 32756193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 5897656 - 5897728
Alignment:
Q  167 atatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||| |||||| ||||| |||||| |||  ||||||||||||||   || | ||||||||||||||||||||    
T  5897656 atatggtatatggtagaatattatgacgtaatttgatccatgtagcggatcccacttagtgggataaggcttg 5897728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 21870300 - 21870200
Alignment:
Q  27 atttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaa 126  Q
    |||| ||||| | |||||||||||||| |||| | ||| |||||||||  || |||||||| || |||||||| ||| || |||| |||||  |||||||    
T  21870300 atttaggcatttagagagaagacctgtagattttgtagtaaggagagtagataagatggagagtagtcaaatcactaaaggcagaggaagacctagaaaa 21870201  T
Q  127 a 127  Q
    |    
T  21870200 a 21870200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 252
Target Start/End: Original strand, 12611671 - 12611781
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    |||||||| || ||||||| |||| |||||||||||| |||||  |||||| |||||||||||||||||| | || | | ||||||||||||||||||||    
T  12611671 ctagagataaatgagttgggtagaaatatgatatatgttagaactttatggtgtcgtttgatccatgtagccgatcccaattagtgggataaggcttggt 12611770  T
Q  242 tgcggttgtat 252  Q
    ||  |||||||    
T  12611771 tgttgttgtat 12611781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 3645243 - 3645352
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||| |||||||| ||||||||||||| |||| |||| |||||||||||| |||||||| ||||||| |||  ||||||||||||| | || |||||||    
T  3645243 aaactgttaagaaagacctagagattaatgagtaggatggagatatgatatgtgatagaatattatggtgtccattgatccatgtagccgatcctactta 3645342  T
Q  225 gtgggataag 234  Q
     || ||||||    
T  3645343 atgagataag 3645352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 26055595 - 26055696
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| ||| ||||||| | ||||||||||||| ||| ||||||  | |||||||||||||||| | || | ||||||||||||||||||||||    
T  26055595 ctagagattaatgagatggataggggtatgatatatgattgaacattatgatggcgtttgatccatgtagccgatcccacttagtgggataaggcttggt 26055694  T
Q  242 tg 243  Q
    ||    
T  26055695 tg 26055696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 39967624 - 39967506
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | |||| |||||| ||||||||| |||||||  | |||| ||||| |||||||||| ||||||||||||||| | || | |||||    
T  39967624 aaactattaagaaagatctagcgattaatgagttggattgagatatagtttatgttagaacattatggcgtagtttgatccatgtagccgatcccactta 39967525  T
Q  225 gtgggataaggcttggttg 243  Q
     || ||||| |||||||||    
T  39967524 ttgtgataatgcttggttg 39967506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 23023382 - 23023467
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||| ||||||| | ||| ||||||| |||||||||||  | |||||||||||||||| |||||| ||||||||||||||||||    
T  23023382 aaactactaagaaagatctacagattaatgagttggataggaacatgatatatgatagaatattatgacgtcgtttgatccatgta 23023467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 38689769 - 38689869
Alignment:
Q  81 gatggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgat 180  Q
    ||||||| || |||||||| |||||| || | ||  | |||||||||||||||||||  ||||||||||||| |||||| |||| |||||||||||||||    
T  38689769 gatggagagtagtcaaatcactagaggcataggactatttagaaaaactattaagaatgacctagagattaatgagttgcatagggatatgatatatgat 38689868  T
Q  181 a 181  Q
    |    
T  38689869 a 38689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 39760558 - 39760447
Alignment:
Q  126 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttag 225  Q
    |||||||||||||   |||||||||||  |||||||||||||||||||||||||| ||| ||| ||||| || ||||||||||||| | ||  || | ||    
T  39760558 aactattaagaaaactctagagattaataagttggatagagatatgatatatgattgaatattgtggcgccg-ttgatccatgtagccaatcttattaag 39760460  T
Q  226 tgggataaggctt 238  Q
    |||||||||||||    
T  39760459 tgggataaggctt 39760447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 10108970 - 10109037
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatgg 192  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  10108970 aaactaataagaaagatctagagattaacgagtttgatagagatatgttatatgatagaacattatgg 10109037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 25117446 - 25117528
Alignment:
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||| ||||| |||||||||| |  |||||||||||| |||||||||||||||| |||||| | | |||||||||||||||    
T  25117446 tattaacaaatatctagagattaccaggttggatagagaaatgatatatgatagaacattatgacattgtttgatccatgtag 25117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 39388940 - 39389060
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatga---tatatgatagaaaattatggcgtcgtttgatccatgtagtctattctac 221  Q
    ||||||||| |||| | ||||||||||| |||||||||||| ||| ||   ||| || ||||| |||||||||||||||||||||||| | | |  | ||    
T  39388940 aaactattaggaaagatctagagattaatgagttggatagaaataagaaactatttggtagaagattatggcgtcgtttgatccatgtggccaaccccac 39389039  T
Q  222 ttagtgggataaggcttggtt 242  Q
    |||||||||||| ||||||||    
T  39389040 ttagtgggataaagcttggtt 39389060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 79184 - 79269
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||||||||||| | ||||||||||| ||| |||||||| |||||   | |||||||| || ||||||||||||||||||||||    
T  79184 aaactattaagaaagatctagagattaatgagctggatagaaatatggcctgtgatagaacataatggcgtcgtttgatccatgta 79269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 12692364 - 12692247
Alignment:
Q  126 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttag 225  Q
    ||||||||||||| |||||||||||| || ||| |||||| | |||  ||||  ||||| |||||| |||||||| ||||| | || | |||| | ||||    
T  12692364 aactattaagaaagacctagagattaccgggttagatagaaaaatggcatatagtagaacattatgccgtcgtttaatccacgcagccgattccaattag 12692265  T
Q  226 tgggataaggcttggttg 243  Q
    ||||||||||||||||||    
T  12692264 tgggataaggcttggttg 12692247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 23492184 - 23492305
Alignment:
Q  118 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctatt 217  Q
    |||||| |||||| | ||||| |  ||| |||||| |||||||||||| |||||||||||||||||| | ||||| ||| ||| |||||||||| | |      
T  23492184 attagagaaactactcagaaagatgtagcgattaatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagccgacc 23492283  T
Q  218 ctacttagtgggataaggcttg 239  Q
    | |||||||| |||||||||||    
T  23492284 ccacttagtgagataaggcttg 23492305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 37826461 - 37826529
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||||||| ||||||||||||| ||||| |||||||||||  |||||||| || |||||||||||||    
T  37826461 ctagagattagcgagttggatagaaatatggtatatgatagagtattatggcatcatttgatccatgta 37826529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 10080036 - 10079973
Alignment:
Q  121 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa 184  Q
    ||||||||| |||||||| | ||||||||||| |||||||||||| ||||||||| ||||||||    
T  10080036 agaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgatatttgatagaa 10079973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 16715449 - 16715544
Alignment:
Q  144 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||||||| | ||| ||||| ||||||||||||||||||| |||||||||  |||||||||| |||| | |  || ||||||||||| |||||||    
T  16715449 agagattaatgggtttgatagggatatgatatatgatagaacattatggcggtgtttgatccacgtagccgaccctgcttagtgggattaggcttg 16715544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 11733904 - 11733986
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 207  Q
    ||||||| |||||| | ||||||||||| ||||| |||||| ||||| ||| |||||||  ||||||||||||||||| ||||    
T  11733904 aaactataaagaaaaatctagagattaatgagttagatagaaatatggtatgtgatagagcattatggcgtcgtttgaaccat 11733986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 38178385 - 38178331
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatga 179  Q
    |||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||||    
T  38178385 aaactattaacaaagacctagacattaatgagttggatagagatatgatatatga 38178331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 490510 - 490606
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||| | |||||||||  | ||||| | |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  490510 tagagattgatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 490606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 11523798 - 11523730
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  11523798 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 11523730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 29520824 - 29520924
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| |||||||||  | ||||| | |||||||||| ||||||||||  |||||||||||||| | |  | | |||||||||||| ||||||||    
T  29520824 tagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagcccaccccatttagtgggataatgcttggtt 29520923  T
Q  243 g 243  Q
    |    
T  29520924 g 29520924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 21425221 - 21425320
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| ||||||||| || ||||||| |||||||||  |||||||| |  ||||||||||||||   |  ||||||||||| ||| |||||||||    
T  21425221 tagagattaatgagttggatcgaaatatgatttatgatagaccattatggcataatttgatccatgtagcagaccctacttagtggaatatggcttggtt 21425320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 27037792 - 27037875
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 208  Q
    ||||||||| |||| |  || ||||||| |||||||||||| ||||| ||| |||||||| ||||||||||  |||||||||||    
T  27037792 aaactattaggaaagatataaagattaatgagttggatagaaatatggtatttgatagaatattatggcgttttttgatccatg 27037875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 14742155 - 14742089
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  14742155 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 14742089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 30198371 - 30198273
Alignment:
Q  145 gagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| ||||||||| |  ||||| | |||||||||| ||||||| || |||||||| |||| | | |  | ||||||||||||||||||||||||    
T  30198371 gagattaatgagttggatcggaatatggtttatgatagaatattatggtgtagtttgatctatgttgccgaccccacttagtgggataaggcttggttg 30198273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 1928659 - 1928594
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  1928659 gatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 1928594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 30748641 - 30748706
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||| |||||||||||| ||||||||||| || ||| ||||||  ||| ||||||||||||||    
T  30748641 agattaatgagttggatagaaatatgatatataattgaacattatgatgtcatttgatccatgtag 30748706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 12491213 - 12491145
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||| ||||    
T  12491213 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttagttg 12491145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 25473478 - 25473410
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||| ||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  25473478 tatgatagaacactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 25473410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 36545356 - 36545424
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||| |||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  36545356 tatgatagaacactatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 36545424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 38392018 - 38391934
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 209  Q
    |||| ||||||||| | ||| ||||||| |||| |||| || ||||| |||||||||||| ||||||||||  ||| ||||||||    
T  38392018 aaaccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatattatggcgtaatttcatccatgt 38391934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 43733416 - 43733488
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgt 250  Q
    ||||||| | ||||||||||||| || ||||||| | || | |||||||||||||||||||||| || |||||    
T  43733416 gatagaacactatggcgtcgtttcattcatgtagccgatcccacttagtgggataaggcttggtggctgttgt 43733488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 43904772 - 43904704
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| |||||||||  | ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  43904772 tagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 43904704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 44529432 - 44529500
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||||||    
T  44529432 tatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 44529500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 45419442 - 45419510
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||| ||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  45419442 tatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 45419510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 5908706 - 5908797
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactat 131  Q
    |||||||||||||| |||| | ||| |||||||||  || || |||||| |||||| ||| ||||||||| | |||||  ||||||||||||    
T  5908706 gagagaagacctgtagattttgtagtaaggagagtagatcaggtggaggatggtcagatcactagagacataggaagacctagaaaaactat 5908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 6483447 - 6483566
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 219  Q
    ||||||||||||||||||| |  || || |||| || |||||| |||||  ||| |  ||||||| ||||| |||| |||||||||||||||   |  ||    
T  6483447 tagaaaaactattaagaaagatttaaaggttaatgaattggattgagatgagatgttcgatagaatattatcgcgttgtttgatccatgtagctgaccct 6483546  T
Q  220 acttagtgggataaggcttg 239  Q
    ||||||||||| ||||||||    
T  6483547 acttagtgggaaaaggcttg 6483566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 16705904 - 16705975
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatat-gatagaaaattatggcgt 195  Q
    |||||||||||||| | ||||||||||| ||||||||| || ||||| ||||| ||| ||| ||||||||||    
T  16705904 aaactattaagaaaaagctagagattaatgagttggatcgaaatatggtatatggatggaacattatggcgt 16705975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 16917358 - 16917456
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| |||||||||||| ||||| |||||||||||| ||| || |  | |||||||||||||| |    | ||||||||||||||| |||||||    
T  16917358 tagagattaatgagttggatagaaatatggtatatgatagaacatt-tgactgcttttgatccatgtagccgtccccacttagtgggataagacttggtt 16917456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 18474062 - 18473979
Alignment:
Q  160 gatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||| ||||||| ||| |||||||| |||||| | ||||||||| ||||||| | |  | ||||||||||||||| ||||||||    
T  18474062 gatatagatatggtatttgatagaacattatgacttcgtttgattcatgtagccgacaccacttagtgggataagacttggttg 18473979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 32276893 - 32276960
Alignment:
Q  176 atgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| ||||||||||  |||||||||||||| | |  | |||||||||||||| |||||||||    
T  32276893 atgatagaacattatggcgtaatttgatccatgtagacgaacccacttagtgggataaagcttggttg 32276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 33666693 - 33666650
Alignment:
Q  127 actattaagaaatacctagagattaacgagttggatagagatat 170  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||    
T  33666693 actattaagaaagacctagagattaatgagtttgatagagatat 33666650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 35362752 - 35362657
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||| ||||||||  || ||||| | |||||||||| ||||||||||  ||||||||||| || | |  | ||||||||||| ||||||||||||    
T  35362752 attaatgagttggactgaaatatggtgtatgatagaacattatggcgtaatttgatccatgcagccaaccccacttagtgggaaaaggcttggttg 35362657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 35914823 - 35914732
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactat 131  Q
    |||||||||||| | |||| ||||| |||||||||   | ||||||||| | |||| ||| ||||||||||| |||||  ||||||||||||    
T  35914823 gagagaagacctatagattttatagcaaggagagtaggtcagatggaggatagtcagatccctagagacagaggaagacatagaaaaactat 35914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 44175275 - 44175346
Alignment:
Q  131 ttaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttga 202  Q
    |||||||| | ||||||||| | ||||||| |||||||||||||||||||| || || || || ||||||||    
T  44175275 ttaagaaagatctagagattgatgagttgggtagagatatgatatatgataaaacatcatcgcttcgtttga 44175346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 17491779 - 17491693
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| || | |||||||| ||||||||   | ||||| | |||||||||| ||||||||||   |||||||||||||    
T  17491779 aaactattaagaaagacttggagattaatgagttggaccaaaatatggtttatgatagaacattatggcgtatgttgatccatgtag 17491693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 39051328 - 39051417
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||||||| |||||||||  |||  ||| |||||||||||||||||| |  | ||||||| |||||| || ||||||    
T  39051328 gagttggataaatatatgataaatgatagaactttacagcgacgtttgatccatgtagtcgaccccacttagtaggataaagcctggttg 39051417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 191
Target Start/End: Complemental strand, 41972018 - 41971849
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||| ||| | |||||||||| ||| |||| | ||| |||||||||  || || |||| | | |||||||| |||||| || | ||| |  ||    
T  41972018 aggtggtttggacatgtagagagaagacgtgtagattttctagcaaggagagtagatcaggtggacgatagtcaaatcactagaggcaaaggaaaaccta 41971919  T
Q  122 gaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatg 191  Q
    ||||||||| ||||||| |  |||||||||| ||||||||  || ||||  | |||||||||| ||||||    
T  41971918 gaaaaactactaagaaagatttagagattaatgagttggactgaaatattgtttatgatagaacattatg 41971849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 1313771 - 1313839
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||||||  ||| |||||||||||  |  | |||||||||||||| |||||||||    
T  1313771 tatgatagaacattatggcgtaattttatccatgtagttgaccccacttagtgggataatgcttggttg 1313839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 1549499 - 1549431
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||||||||| |||||||||||  | |||||||||| ||||| ||||   | ||||||||||||||||    
T  1549499 ctagagattaatgagttggatagcaacatgatatatggtagaacattactacatcgtttgatccatgta 1549431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 3464246 - 3464182
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||||| |||||||  | ||||||||||| ||||| |||| ||||| ||||||||| ||||    
T  3464246 tatgatagaacattatggtatagtttgatccatatagtcgattccacttaatgggataagacttg 3464182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 4011240 - 4011324
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 209  Q
    |||||||||||||| | ||| ||||||| |||||||||| |||| ||  ||| ||||||| |||||| | | |||||||| ||||    
T  4011240 aaactattaagaaagatctaaagattaatgagttggataaagatgtggaatacgatagaacattatgacattgtttgatcaatgt 4011324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 29700318 - 29700426
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||||||| | |||| ||||||  | |||||| ||| |||||||||  |||||||||||| | |||| ||| ||||||  ||| |||||  ||    
T  29700318 aggtggtttgggcatatagagaaaagaccattggattctgtagtaaggagagtagattagatggaggatagtcatatcactagaggtagaggaagaccta 29700417  T
Q  122 gaaaaacta 130  Q
    |||||||||    
T  29700418 gaaaaacta 29700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 36565316 - 36565248
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||  |||||||||||||| | |  | |||||||||||||||||| |||||    
T  36565316 tatgatagaacactatggcgttatttgatccatgtagccgaccccacttagtgggataaggctcggttg 36565248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 12966173 - 12966291
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||||||||||  |||||||||| || ||||||||| ||||| ||||||||| |  |||||| | | ||||||| ||||||| | || | |||||    
T  12966173 aaactattaagaaatatttagagattaatgatttggatagaaatatggtatatgataaatcattatgccattgtttgattcatgtagccgatcccactta 12966272  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||||||||    
T  12966273 gtgggataaggcttggttg 12966291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 41483644 - 41483762
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||| |||||||||||||||| |||||||||||||| |||||  |||||| ||| | |||||||||||| | |  | |||||    
T  41483644 aaactattaagaaagatctagaaattaacgagttggatatagatatgatatatggtagaactttatggtgtcatatgatccatgtagccgaccccactta 41483743  T
Q  225 gtgggataaggcttggttg 243  Q
    ||||||||||  |||||||    
T  41483744 gtgggataagatttggttg 41483762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 30914610 - 30914510
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  |||||||  |||||||||||| | | | |  | ||||||||||||||||||||||    
T  30914610 ctagagattaatgagttggatagggatatgatatatgatagaactttatggcagcgtttgatccatattgccaaccccacttagtgggataaggcttggt 30914511  T
Q  242 t 242  Q
    |    
T  30914510 t 30914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 40139073 - 40138987
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| | ||||||||||| | ||| |||||| |||||| ||||||||||| |||||| |||| ||||||||||||||    
T  40139073 aaactattaagaaagatctagagattaatgcgtttgatagaaatatgacatatgatagaatattatgacgtcatttgatccatgtag 40138987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 19262583 - 19262498
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    |||||||| ||||  | ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||  ||||||| ||||||    
T  19262583 aaactatttagaagcatctagagattaatgagttggatagggatatgatatatgatagaacattatggcggtgtttgattcatgta 19262498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 40008535 - 40008470
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||    
T  40008535 agattaatgagttggatagagacatgatatatgatagaacattatgtcgttgtttgatccatgtag 40008470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 27893746 - 27893570
Alignment:
Q  67 aggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagag 166  Q
    ||||||||  || ||||||||| |  ||| ||| ||||||| ||| ||||   ||||||||||||||||||| |  |||||||||| ||| ||||  ||     
T  27893746 aggagagtagatcagatggaggatattcagatcactagagatagaggaagtcctagaaaaactattaagaaagatttagagattaatgagctggaccgaa 27893647  T
Q  167 atatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||| | |||||||||| |||||||| |  |||||| ||||||| | |  |||||||||| |||||||||||||||    
T  27893646 atatgttttatgatagaacattatggcataatttgattcatgtagccgaccctacttagtgcgataaggcttggttg 27893570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 36101935 - 36101784
Alignment:
Q  92 gtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatg 191  Q
    |||| ||| |||||| |||| |||||  |||||||| ||||| |||| |  || ||||||| |||||||||  | ||||| | |||||||||| ||||||    
T  36101935 gtcagatcactagaggcagaggaagacctagaaaaattattatgaaagatttatagattaatgagttggatcaaaatatggtttatgatagaacattatg 36101836  T
Q  192 gcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
     |||  |||||||||||||||  |  | ||||||||||||||||||||||||    
T  36101835 acgtaatttgatccatgtagttgaccccacttagtgggataaggcttggttg 36101784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 28628058 - 28627940
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||| |||| |  |||||||||| |||||||||  | || || | |||||||||| ||||||||||  |||||||||||||| | | || |||||    
T  28628058 aaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgactccactta 28627959  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||||||| ||||    
T  28627958 gtgggataaggcttagttg 28627940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 36245376 - 36245267
Alignment:
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 228  Q
    |||||||||| |  || |||||||| |||| |||||| ||||| |||||||||||| |||||| |||||||||||||| |||||| || | || |||| |    
T  36245376 tattaagaaagatgtacagattaactagttagataga-atatggtatatgatagaacattatgacgtcgtttgatccacgtagtcgatcccacatagttg 36245278  T
Q  229 gataaggcttg 239  Q
    |||||||||||    
T  36245277 gataaggcttg 36245267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 475974 - 476050
Alignment:
Q  166 gatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| |||| ||||| |||||||||  |||||||||| |||||  |||||||||||||||||||||||||||||    
T  475974 gatatgatttatg-tagaacattatggcgctgtttgatccaagtagtggattctacttagtgggataaggcttggttg 476050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 7220931 - 7221031
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| | |||||||| |||||| |||| ||||||||||||||| | || |||||||||||||| | |  | |||||||||  ||||||||||||    
T  7220931 tagagattaatgtgttggataaagatataatatgtgatagaaaattatgacatcatttgatccatgtagccaaccccacttagtggtgtaaggcttggtt 7221030  T
Q  243 g 243  Q
    |    
T  7221031 g 7221031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 31840450 - 31840505
Alignment:
Q  188 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||||||| ||||||| |||  ||||||||||||||||||||||||||    
T  31840450 tatggcgtcgtttgattcatgtagcctaccctacttagtgggataaggcttggttg 31840505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 45601633 - 45601751
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag-tctattctactt 223  Q
    |||| ||||||||| | ||||||||||| |||||||||  | ||||||| |||||||||| | ||||| ||  |||||||||||||| |  | || ||||    
T  45601633 aaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatccatgtagctgaactc-actt 45601731  T
Q  224 agtgggataaggcttggttg 243  Q
    ||||||||||||||||||||    
T  45601732 agtgggataaggcttggttg 45601751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 22174157 - 22174243
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||| || ||| | ||||||||||| || || |||||| ||||| ||| |||||||| |||||||||| |||||||||||||||    
T  22174157 aaactataaacaaagatctagagattaatgaattagatagaaatatggtatgtgatagaacattatggcgttgtttgatccatgtag 22174243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 22349825 - 22349891
Alignment:
Q  173 tatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||||||| | ||||||||| |||||||||||||||| |  | ||||||||||||||||||||    
T  22349825 tatatgatagaatactatggcgtcatttgatccatgtagtcgaccccacttagtgggataaggcttg 22349891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 24549813 - 24549728
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||| | ||||||||||| ||||||||| || ||||| ||| ||||||||  |||| ||||||||| ||||||||||    
T  24549813 aaactattaagaaagatctagagattaatgagttggattgaaatatggtatttgatagaatcttattgcgtcgttt-atccatgtag 24549728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 36239921 - 36239835
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||| |||| |  ||||||||||||||||||||  | ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  36239921 aaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccatgtag 36239835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 38607201 - 38607267
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | |||||||||||||||||||||||| | | || |||||||||| |||||||||||||    
T  38607201 tgatagaacactatggcgtcgtttgatccatgtagccgactccacttagtgggttaaggcttggttg 38607267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 6807390 - 6807447
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||| |||||| ||||| | |||||||||| ||||||||||||||||||||||||||    
T  6807390 gagttagatagaaatatggtgtatgatagaacattatggcgtcgtttgatccatgtag 6807447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 28542074 - 28541941
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtcta-ttc 218  Q
    ||||||||||||||||||| |  |||||||||| ||||||||| ||  |||| | |||||||||| || ||||| | ||||||||| ||||| | |   |    
T  28542074 tagaaaaactattaagaaagatttagagattaatgagttggattgaactatggtttatgatagaacatcatggcatagtttgatccgtgtagccgacccc 28541975  T
Q  219 tacttagtgggataaggcttggttgcggttgtat 252  Q
     ||||||| ||||||||||||||||  |||||||    
T  28541974 cacttagttggataaggcttggttgttgttgtat 28541941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 41578250 - 41578189
Alignment:
Q  123 aaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa 184  Q
    ||||||| |||||||| |  |||||||||  |||||||||||||||||||||||||||||||    
T  41578250 aaaaactgttaagaaacatatagagattagtgagttggatagagatatgatatatgatagaa 41578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 6375075 - 6375143
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  6375075 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 6375143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 11594167 - 11594235
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  11594167 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 11594235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 12841350 - 12841282
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  12841350 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 12841282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 21078124 - 21078192
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||||||| |||||||||||||| | | |  | ||||||||||||||||||||||    
T  21078124 tatgatagaacattatggcgtcatttgatccatgtagccgacttcatttagtgggataaggcttggttg 21078192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 28208403 - 28208335
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  28208403 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 28208335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 31682677 - 31682609
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  31682677 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 31682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 34869627 - 34869695
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  ||| ||||||||||||||||||||||    
T  34869627 tatgatagaacactatggcgtcatttgatccatgtagccgaccctaattagtgggataaggcttggttg 34869695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 35906276 - 35906208
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  35906276 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 35906208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 39906447 - 39906379
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  39906447 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 39906379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 1569174 - 1569261
Alignment:
Q  126 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
    ||||||||||||| | ||||||||||| |||||||||  | ||||| | |||||||||| |||| |||||  ||||||| ||||||||    
T  1569174 aactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatagaacattacggcgtaatttgatcgatgtagtc 1569261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 36652199 - 36652274
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgt 250  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||||||| |||||| |||||    
T  36652199 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgctgttgt 36652274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 40980024 - 40979925
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtatt 253  Q
    |||||||||  | ||||| | |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||  ||||||||    
T  40980024 gagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtatt 40979925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 9797828 - 9797758
Alignment:
Q  128 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgt 198  Q
    |||||||||||  | |||||||||| |||||||||||||||||||| ||||||| || ||| ||| |||||    
T  9797828 ctattaagaaaaccatagagattaatgagttggatagagatatgatgtatgatataacattgtggtgtcgt 9797758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 40830359 - 40830444
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||||  | ||||| ||||| |||||| |||  ||||||||||||||||||| |||| || | ||||||||||||||||    
T  40830359 aaactattaagaaggatctagaaattaatgagttgtatat-gatatgatatatgatagaacattacggaggcgtttgatccatgtag 40830444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 30144835 - 30144904
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagaca 109  Q
    |||||||||| ||| |||||||||| | | |||||  || |||||||||||||||||||| |||||||||    
T  30144835 gagagaagacttgtagattctatagtacgaagagtagatcagatggagggtggtcaaatcactagagaca 30144904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 45836578 - 45836489
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||| | |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||||||| |||||    
T  45836578 gagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttg 45836489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 24777168 - 24777236
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||| |||| |||||| ||||||| | || |||||||||||||||| |||||||||    
T  24777168 tatgatagaacactatgacgtcatttgattcatgtagccgatcctacttagtgggataaagcttggttg 24777236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 28021146 - 28021210
Alignment:
Q  179 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||| ||||||  ||||||||| |||||||| ||| || |||| |||||||||||||||||||    
T  28021146 atagaacattatgaggtcgtttgacccatgtagcctactccacttggtgggataaggcttggttg 28021210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 29653671 - 29653619
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatat 177  Q
    |||||||||||||| | ||||||||||| ||||| |||||| |||||||||||    
T  29653671 aaactattaagaaagatctagagattaatgagttagatagaaatatgatatat 29653619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 34035261 - 34035161
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    ||||||| || |||||||||  | ||||| |  ||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||| ||||||||||    
T  34035261 tagagatcaatgagttggatccaaatatggttcatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggattaggcttggtt 34035162  T
Q  243 g 243  Q
    |    
T  34035161 g 34035161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 37618152 - 37618220
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||| ||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  37618152 tatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 37618220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 40149088 - 40149020
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| |||||||||   ||||||| |||||| | | || ||||||||||||||||||||||||    
T  40149088 tatgatagaacattatggcgcaatttgatctatgtagccgaatccacttagtgggataaggcttggttg 40149020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 4604754 - 4604821
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||| |||||||    
T  4604754 tatgatagaacattatggcgtactttgatccatgtagccaaccccacttagtgggataagacttggtt 4604821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 25579317 - 25579178
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| |||||| || | |||||||||| ||| |||||| | | ||| |||||  |||||||||||| | |||||||| | ||||  | |||||||  ||    
T  25579317 aggtggtttggggatgtagagagaagacatgtagattctgtggtaagaagagtagattagatggaggatagtcaaatcacaagagttaaatgaagaccta 25579218  T
Q  122 gaaaaactattaagaaatacct-agagattaacgagttgg 160  Q
    |||||||||||| ||| ||| | ||||||||| |||||||    
T  25579217 gaaaaactattaggaactacttaagagattaatgagttgg 25579178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 28858202 - 28858261
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa 184  Q
    |||||||||||||| | |||||||||||  ||||||||||| ||||  ||||||||||||    
T  28858202 aaactattaagaaagatctagagattaataagttggatagaaatattttatatgatagaa 28858261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 33073149 - 33073204
Alignment:
Q  188 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||| |||| |||||||||||||| | || | ||||||||||||||||||||||||    
T  33073149 tatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttg 33073204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 48919332 - 48919387
Alignment:
Q  188 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||| |||||||||||||||| |  | ||||| ||||||||||||||||||    
T  48919332 tatggcgtcatttgatccatgtagtcgaccccacttaatgggataaggcttggttg 48919387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 15311113 - 15311151
Alignment:
Q  161 atagagatatgatatatgatagaaaattatggcgtcgtt 199  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  15311113 atagagatatgatatatgatacaaaattatggtgtcgtt 15311151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 25826603 - 25826553
Alignment:
Q  129 tattaagaaatacctagagattaacgagttggatagagatatgatatatga 179  Q
    |||||||||||| ||||| |||||  |||||||||| ||||||||||||||    
T  25826603 tattaagaaatagctagatattaataagttggatagtgatatgatatatga 25826553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 29650593 - 29650659
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | || |||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  29650593 tgatagaacactaaggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 29650659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 30144932 - 30144978
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatg 171  Q
    |||||||||||||| | ||||||||||| ||||||||||| ||||||    
T  30144932 aaactattaagaaagatctagagattaatgagttggatagggatatg 30144978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 31869175 - 31869109
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | | ||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  31869175 tgatagaacactctggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 31869109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 33731997 - 33732116
Alignment:
Q  131 ttaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtggga 230  Q
    |||||||| | ||| ||||||| ||||  ||| || ||||| | |||||||||| ||||||||    |||||||||||||| |  | | |||||||||||    
T  33731997 ttaagaaagatctaaagattaatgagtgagatcgaaatatggtttatgatagaacattatggcaa--tttgatccatgtagccggtcccacttagtggga 33732094  T
Q  231 taaggcttggttgcggttgtat 252  Q
    |||||||||||||  |||||||    
T  33732095 taaggcttggttgttgttgtat 33732116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 42177140 - 42177058
Alignment:
Q  128 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 210  Q
    ||||||||||| | |||||||| || |||||  ||| | ||||| |||||||| ||| |||||| |||||||||||| |||||    
T  42177140 ctattaagaaagatctagagataaatgagtttcataaaaatatggtatatgattgaacattatgacgtcgtttgatctatgta 42177058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 43281883 - 43281949
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||| ||||||||||||    
T  43281883 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttggttg 43281949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 5335962 - 5336039
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatc 99  Q
    ||||| ||||||||| | ||||||||| |||| |||||| |||  ||||||||  |||||||||||||  ||||||||    
T  5335962 aggtggtttgggcatatagagagaagaactgtggattctgtagttaggagagtagattagatggaggggagtcaaatc 5336039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 28708599 - 28708656
Alignment:
Q  186 attatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  28708599 attatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 28708656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 29013259 - 29013162
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| | ||||||||||||| |||||| ||| | || |||||||| |  |||||||||||||||| |   || |||||| ||||||| |||||||    
T  29013259 agattaatgggttggatagagatgtgatatgtgacataatattatggctttatttgatccatgtagtcgaccatatttagtgtgataaggtttggttg 29013162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 47848716 - 47848825
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||||||| | |||||||||| |||  ||||| ||  |||||||||  || ||||||||| | |||  ||| |||||| |||| |||||| ||    
T  47848716 aggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagtctgatcactagaggcagaggaagaacta 47848815  T
Q  122 gaaaaactat 131  Q
    ||||||||||    
T  47848816 gaaaaactat 47848825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 2885797 - 2885729
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||| ||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  2885797 tatgatagaacactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 2885729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 5336077 - 5336161
Alignment:
Q  127 actattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||||  | ||||||||||| |||||||| | ||| ||| | | |||| ||| | |||||||||||||||| |||||||    
T  5336077 actattaagaatgatctagagattaatgagttggagaaagacatggtttttgattgaatactatggcgtcgtttgattcatgtag 5336161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 5418293 - 5418349
Alignment:
Q  187 ttatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  |||||||||||||||| |  | | ||||||||||||||||||||||    
T  5418293 ttatggcgtaatttgatccatgtagtcgaccccatttagtgggataaggcttggttg 5418349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 27648987 - 27649055
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | | ||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  27648987 tatgatagaacactgtggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttg 27649055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 28005687 - 28005783
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa----aattatggcgtcgtttgatccatgtagt 212  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||||| |||||||     ||||||| |||||||||||||||||||    
T  28005687 tagaaaaactattaagaaagatctagagattaatgagtttgatagggatatgatatacgatagaacattcattatggtgtcgtttgatccatgtagt 28005783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 28186900 - 28186778
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| |  |||||||||| |||||||||||||||||||||       ||| ||||||||||||||||||||||| || | |  ||||| |    
T  28186900 aaactattaagaaagatttagagattaatgagttggatagagatatgata-------gaacattatggcgtcgtttgatccatgcagccgaccctactca 28186808  T
Q  225 gtgggataaggcttggttgcggttgtattt 254  Q
     ||||||||||||||||||  |||||||||    
T  28186807 atgggataaggcttggttgttgttgtattt 28186778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 30639395 - 30639306
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| ||||||||||| ||||| | || ||| |||| ||||||||||||||||||| |  ||||||||||||||||| ||||||||    
T  30639395 gagttggacagagatatgatttatgacaaaacattgtggcatcgtttgatccatgtagtcaaccctacttagtgggataagacttggttg 30639306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 15588486 - 15588399
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    |||||||||| | | ||| ||||||| |||| ||||||||||||||||||| |||||| | |  ||||||||||||||||||||||||    
T  15588486 gagttggataaaaacatggtatatgacagaacattatggcgtcgtttgatctatgtagccgaccctacttagtgggataaggcttggt 15588399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 12576985 - 12576867
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | ||||||||||| |||||| ||||| ||||| |||||||||||  ||||||| ||| ||| || ||||||| | |  | | |||    
T  12576985 aaactattaagaaagatctagagattaatgagttgaatagaaatatggtatatgatagaccattatggtgtcattttatacatgtagccgaccccaatta 12576886  T
Q  225 gtgggataaggcttggttg 243  Q
    ||||||||| |||||||||    
T  12576885 gtgggataaagcttggttg 12576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 27998598 - 27998716
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||| ||||||| | ||| ||||||| ||||| |||||  | |||||||||||||||| |||||| ||||||||||||||||||  | |  | |||||    
T  27998598 aaactactaagaaagatctacagattaatgagttagataggaacatgatatatgatagaatattatgacgtcgtttgatccatgtaaccgaccccactta 27998697  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||| || |||||||    
T  27998698 gtgggatatggtttggttg 27998716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 41808100 - 41808198
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgc 244  Q
    ||||||| |||||||||| | ||||||| |||||||||| |||||| | ||||||||||||||||||| ||   ||||||| ||||| | |||||||||    
T  41808100 agattaatgagttggatataaatatgatgtatgatagaacattatgacatcgtttgatccatgtagtcgatctgacttagtaggataggacttggttgc 41808198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 43475396 - 43475514
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| | | ||||||||| ||||||||| || ||||||| |||| |||||  |||||| ||  ||||||||| |||| | | || |||||    
T  43475396 aaactattaagaaagatccagagattaatgagttggatcgaaatatgatttatggtagaacgttatggtgtaatttgatccacgtagccaactccactta 43475495  T
Q  225 gtgggataaggcttggttg 243  Q
     ||||||||||||||||||    
T  43475496 atgggataaggcttggttg 43475514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 36123290 - 36123189
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| |||||   ||| | ||||||||||||||||| ||||||| | ||||||||||||||| ||  | | ||||||||||||||| ||||||    
T  36123290 ctagagattaatgagttatgtaggggtatgatatatgatagaacattatggtggcgtttgatccatgtaatcggtcccacttagtgggataagacttggt 36123191  T
Q  242 tg 243  Q
    ||    
T  36123190 tg 36123189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 18351009 - 18350941
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| |||||||||||| ||||| ||| || ||||| |||||| |||||||||||||||||||    
T  18351009 tagagattaatgagttggatagaaatatggtatttgttagaacattatgacgtcgtttgatccatgtag 18350941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 38684637 - 38684755
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||| |||||||| | |||||||||||  ||||||||||| ||||| ||  |||||||| ||||||||||  |||||| ||||||||  |  | |||||    
T  38684637 aaacttttaagaaagatctagagattaattagttggatagaaatatggtacttgatagaacattatggcgttatttgattcatgtagttgaccccactta 38684736  T
Q  225 gtgggataaggcttggttg 243  Q
    |||| |||| |||||||||    
T  38684737 gtggaataaagcttggttg 38684755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 2645176 - 2645265
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||| || || ||| ||||| || ||||| || ||||||||||||||||| |    ||||||||||||||||||||||||||    
T  2645176 gagttggatagaaatgtggtatttgataaaacattatagcatcgtttgatccatgtagccggccctacttagtgggataaggcttggttg 2645265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 9235204 - 9235316
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| |  |||||||||| ||| ||||| || ||||| | |||||||||| |||||||| |  |||||||||||||| | |  | |||||    
T  9235204 aaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaacattatggcataatttgatccatgtagccga-cccactta 9235302  T
Q  225 gtgggataaggctt 238  Q
    ||||||||||||||    
T  9235303 gtgggataaggctt 9235316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 20456975 - 20457044
Alignment:
Q  170 tgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||| |||||||||| ||||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  20456975 tgatgtatgatagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 20457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 38685153 - 38685242
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||| | |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  38685153 gagttggatccaaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 38685242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 29816589 - 29816657
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  29816589 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 29816657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 30213782 - 30213850
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  30213782 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 30213850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 2915571 - 2915504
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggtt 242  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||||||||||||    
T  2915571 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggtt 2915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 11002494 - 11002428
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | |||||| | ||||||| ||||||||| |  ||||||||||||||||||||||||||    
T  11002494 tgatagaacactatggcattgtttgattcatgtagtcgaccctacttagtgggataaggcttggttg 11002428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 14749464 - 14749542
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 203  Q
    ||||||| |||||  | |||||||||||||||||||||||| ||||| | | |||||||| | ||||||||| ||||||    
T  14749464 aaactatcaagaaggatctagagattaacgagttggatagaaatatggtttttgatagaacactatggcgtcatttgat 14749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 2712986 - 2713095
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||||||| | |||||||||||||| |||||| ||  |||||||||  || |||||||||   |||||||| |||||| |||  |||||  ||    
T  2712986 aggtggtttgggcatgtagagagaagacctgtggattctgtatgaaggagagtagatcagatggaggagagtcaaatcactagagtcaggggaagaccta 2713085  T
Q  122 gaaaaactat 131  Q
    ||||||||||    
T  2713086 gaaaaactat 2713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 3442979 - 3442878
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    ||||||||||| || ||||| | ||| ||| | | |||||||| | |||||||||||||||| ||||||| | |  | ||||||||| ||||||||||||    
T  3442979 ctagagattaatgaattggagaaagacatggtttttgatagaacactatggcgtcgtttgattcatgtagccgaccccacttagtggcataaggcttggt 3442880  T
Q  242 tg 243  Q
    ||    
T  3442879 tg 3442878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 11675704 - 11675805
Alignment:
Q  143 tagagattaacgagttggatag-agatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggt 241  Q
    |||||||||| |||||||||   | ||||| | |||||||||| |||||||||| |||| |||||||||| | |  | ||||||| ||||||||||||||    
T  11675704 tagagattaatgagttggattttaaatatggtttatgatagaacattatggcgtagtttaatccatgtagccgaccccacttagttggataaggcttggt 11675803  T
Q  242 tg 243  Q
    ||    
T  11675804 tg 11675805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 39128236 - 39128305
Alignment:
Q  142 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||||||||   |||||||||| ||| |||||||||||| || ||||||||| |||||||| |||||||    
T  39128236 ctagagattactcagttggatagggatttgatatatgatacaacattatggcgccgtttgatacatgtag 39128305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 408565 - 408501
Alignment:
Q  179 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  408565 atagaatactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 408501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 2066154 - 2066238
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 209  Q
    |||||| ||| ||| | ||||||||||| |||||||||| |  |||  | || ||||||||||||||||||||| ||||||||||    
T  2066154 aaactactaaaaaagatctagagattaatgagttggataaaattatagtttacgatagaaaattatggcgtcgtgtgatccatgt 2066238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 4460366 - 4460414
Alignment:
Q  127 actattaagaaatacctagagattaacgagttggatagagatatgatat 175  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| |||||    
T  4460366 actattaagaaagacctagagattaatgagttggatagaaatacgatat 4460414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 4496591 - 4496659
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||||||    
T  4496591 tatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 4496659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 5303619 - 5303722
Alignment:
Q  143 tagagattaacgagttggatagagatat--gatatatgatagaaaattatggcgtcg-tttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    ||||| |||| |||||||||||| ||||  | |||||||||||| |||||||||| | ||| |||||||||| | || | ||||||||||||||| | ||    
T  5303619 tagagtttaatgagttggatagaaatatatggtatatgatagaatattatggcgttgttttaatccatgtagccgatcccacttagtgggataagtcctg 5303718  T
Q  240 gttg 243  Q
    ||||    
T  5303719 gttg 5303722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 10639509 - 10639577
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||| |||||||||||||||||||    
T  10639509 tatgatagaacactatggcgtcatttgatccatgtagccgaccccactttgtgggataaggcttggttg 10639577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 12492459 - 12492391
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||||||    
T  12492459 tatgatagaacactatggcgtcatttgatgcatgtagccgaccccacttagtgggataaggcttggttg 12492391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 28276445 - 28276513
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||||| ||||| ||  |||||||||||||| | | || |||||| |||||||||||||||||    
T  28276445 tatgatagaaaactatggtgtaatttgatccatgtagccaactccacttagcgggataaggcttggttg 28276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 28976934 - 28976866
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||||||    
T  28976934 tatgatagaacactatggcgtcatttgattcatgtagccgaccccacttagtgggataaggcttggttg 28976866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 38132543 - 38132611
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||||||  |||||||||||| | | |  | ||||||||||||||||||||||||    
T  38132543 tatgatagaacattatggcgtaatttgatccatgtggccgaccccacttagtgggataaggcttggttg 38132611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 41200428 - 41200360
Alignment:
Q  168 tatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggc 236  Q
    ||||| |||||||||||  ||||||| || |||||||||||||| |||  | |||||||||||||||||    
T  41200428 tatgacatatgatagaacgttatggcatcatttgatccatgtagcctaccccacttagtgggataaggc 41200360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 42576217 - 42576285
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| || |||||||  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  42576217 tatgatagaacataatggcgtaatttgatccatgtagccgacccgacttagtgggataaggcttggttg 42576285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 14667935 - 14668046
Alignment:
Q  132 taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggat 231  Q
    ||||||| | ||||||||||| |||||||||  |  |||| | |||||||||| ||||||| ||  |||||||||||||  | |  | ||||||||||||    
T  14667935 taagaaagatctagagattaatgagttggatccaagtatggtttatgatagaacattatggtgtaatttgatccatgtaaccgaccccacttagtgggat 14668034  T
Q  232 aaggcttggttg 243  Q
    ||| ||||||||    
T  14668035 aagacttggttg 14668046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 14749367 - 14749458
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactat 131  Q
    |||||||||||||| |||||| | | |||||||||  || ||||||||||  |||||||| ||| || |||| |||||  ||||||||||||    
T  14749367 gagagaagacctgtggattctgttgtaaggagagtcgatcagatggaggggagtcaaatcactaaaggcagaggaagacctagaaaaactat 14749458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 27249358 - 27249425
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaat 187  Q
    ||||||||||||||||| |   |||||||||||| || | |||||||||||| || ||||||||||||    
T  27249358 tagaaaaactattaagagaggtctagagattaacaaggtagatagagatatgttacatgatagaaaat 27249425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 31636160 - 31636049
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||||||| | ||||||||||| || |||  | ||| |||||||||  ||||||||| |||  |||||||| ||||||| ||  |||||  ||    
T  31636160 aggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagattagatggtggggagtcaaatcactagagataggggaagatcta 31636061  T
Q  122 gaaaaactatta 133  Q
    ||||||||||||    
T  31636060 gaaaaactatta 31636049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 3302053 - 3302119
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | || |||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  3302053 tgatagaacactacggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 3302119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 13141710 - 13141824
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    ||||||||||| || ||||||||||||| | ||   |||||||| |||||||||  |||| ||| ||   ||||| | ||||||||||  ||||||||||    
T  13141710 aaactattaaggaagacctagagattaatgtgtactatagagatgtgatatatgccagaacattgtgaattcgttcgttccatgtagttaattctactta 13141809  T
Q  225 gtgggataaggcttg 239  Q
     | ||||||||||||    
T  13141810 ataggataaggcttg 13141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 13561459 - 13561397
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  13561459 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 13561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 244
Target Start/End: Complemental strand, 15252848 - 15252750
Alignment:
Q  146 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgc 244  Q
    ||||||||||||||||| || ||| | | |||||||||| ||||||  || |||| || ||||||| | |  | |||||||||||||||||||| ||||    
T  15252848 agattaacgagttggatcgaaatagggtttatgatagaacattatgatgtagtttaattcatgtagccgaccccacttagtgggataaggcttgattgc 15252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 16347440 - 16347378
Alignment:
Q  190 tggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtat 252  Q
    ||||||| |||||||||||||| | |  ||||||||||||||||| ||||||||  |||||||    
T  16347440 tggcgtcatttgatccatgtagccgaccctacttagtgggataagacttggttgttgttgtat 16347378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 28411885 - 28411951
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||| | |||||||| ||||||| ||||||| | |  | ||||||||||||||||||||||||    
T  28411885 tgatagaacactatggcgttgtttgattcatgtagccgaccccacttagtgggataaggcttggttg 28411951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 30588610 - 30588712
Alignment:
Q  131 ttaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtggga 230  Q
    |||||||| | |||||||| || ||||||||| || ||||| | ||| |||||| |||||| |||  | |||||||||||| | | || |||||||||||    
T  30588610 ttaagaaagatctagagatgaatgagttggatcgaaatatggtttataatagaacattatgacgtgatatgatccatgtagccgactccacttagtggga 30588709  T
Q  231 taa 233  Q
    |||    
T  30588710 taa 30588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 39322196 - 39322146
Alignment:
Q  120 tagaaaaactattaagaaatacctagagattaacgagttggatagagatat 170  Q
    ||||||||||||||||||| | ||| ||||||| |||||||||||| ||||    
T  39322196 tagaaaaactattaagaaagatctaaagattaatgagttggatagaaatat 39322146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 2713146 - 2713211
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    ||||||| | |||||| ||||||||| ||||||| | |  | ||||||||||||||||||||||||    
T  2713146 gatagaacactatggcatcgtttgattcatgtagccgagcccacttagtgggataaggcttggttg 2713211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 21952399 - 21952508
Alignment:
Q  22 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 121  Q
    ||||| ||||| ||| | |||||||| ||||| |||||||||| ||||||| |  || ||||||||||  |||||||| ||||||  ||  |||||  ||    
T  21952399 aggtggtttggacatgtagagagaagtcctgtggattctatagtaaggagaatagatcagatggaggggagtcaaatcactagaggtaggggaagaccta 21952498  T
Q  122 gaaaaactat 131  Q
    ||||||||||    
T  21952499 gaaaaactat 21952508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 38684540 - 38684589
Alignment:
Q  40 gagagaagacctgttgattctatagaaaggagagtgaattagatggaggg 89  Q
    ||||||||||||||  ||||||||| |||||||||  |||||||||||||    
T  38684540 gagagaagacctgtgtattctatagtaaggagagtatattagatggaggg 38684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 418141 - 418073
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    |||||||||| |||||||||  | || || | |||||||||| ||||||||||  ||||||||||||||    
T  418141 tagagattaatgagttggatccaaatgtggtttatgatagaacattatggcgtaatttgatccatgtag 418073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 2075548 - 2075484
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||    
T  2075548 tatgatagaatactatggcgtcatttgattcatgtagccaaccccacttagtgggataaggcttg 2075484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 5558348 - 5558416
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | |||||| |  |||||||||||||| | |  | ||||||||||||||||||||||||    
T  5558348 tatgatagaacactatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttg 5558416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 5860041 - 5860105
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||||  ||||||||||  ||||||| |||||| | |  ||||||||||||||||||||||    
T  5860041 tatgatagaccattatggcgtaatttgatctatgtagccgaccctacttagtgggataaggcttg 5860105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 9917582 - 9917526
Alignment:
Q  118 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgata 174  Q
    |||||| |||||||| ||||| |  ||||||| || |||||||||||||||||||||    
T  9917582 attagagaaactatttagaaagatatagagatcaatgagttggatagagatatgata 9917526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 9917671 - 9917579
Alignment:
Q  41 agagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactatta 133  Q
    ||||||||| |||||||| | ||| || ||||||  || ||||||||| | |||||||| | ||||||||| || ||  ||||||||||||||    
T  9917671 agagaagacatgttgattttgtagtaaagagagtcgatcagatggaggatagtcaaatcacaagagacagaggatgacctagaaaaactatta 9917579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 14911347 - 14911415
Alignment:
Q  143 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 211  Q
    ||||| |||| |||||||||  | ||||||| | |||||||| | ||||||||| ||||||||||||||    
T  14911347 tagaggttaatgagttggatccaaatatgatttttgatagaatactatggcgtcatttgatccatgtag 14911415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 16706340 - 16706455
Alignment:
Q  125 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 224  Q
    |||||||||||||| || ||||| | || |  |||| |||||||||||| ||||| |||| |||||   || |||| ||||||||||| ||  | || ||    
T  16706340 aaactattaagaaagacatagaggtcaatggtttggctagagatatgatctatgaaagaatattat---gttgtttaatccatgtagtttaccccaccta 16706436  T
Q  225 gtgggataaggcttggttg 243  Q
    |||||||||| ||||||||    
T  16706437 gtgggataagacttggttg 16706455  T

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Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 22576181 - 22576217
Alignment:
Q  140 acctagagattaacgagttggatagagatatgatata 176  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  22576181 acctaaagattaatgagttggatagagatatgatata 22576217  T

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Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 32442197 - 32442141
Alignment:
Q  178 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 234  Q
    ||||||| ||||||||||  |||||||||||||| | | || |||||||||||||||    
T  32442197 gatagaacattatggcgtaatttgatccatgtagccgactccacttagtgggataag 32442141  T

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Target: scaffold0373 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 2424 - 2338
Alignment:
Q  127 actattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 213  Q
    |||||||||||| | ||||||||||| ||||| |||||| ||||| ||||| |||||| |||||||| | ||| |||||||||||||    
T  2424 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatggcattgttggatccatgtagtc 2338  T

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Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 16787 - 16864
Alignment:
Q  177 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgcggttgtattt 254  Q
    |||||||| | ||||||||| ||||||| |||||| | | || ||||||||||||||||||||||||  |||||||||    
T  16787 tgatagaacactatggcgtcatttgatctatgtagccgactccacttagtgggataaggcttggttgttgttgtattt 16864  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 28964 - 28896
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||||||    
T  28964 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 28896  T

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Target: scaffold0392 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 6864 - 6782
Alignment:
Q  158 tggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttgg 240  Q
    |||||||| ||||| ||||||||| || |||||||| |  |||||||||||||| | |  | |||||||||||||||||||||    
T  6864 tggatagaaatatggtatatgatataacattatggcataatttgatccatgtagccaaccccacttagtgggataaggcttgg 6782  T

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Target: scaffold1318 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 538 - 602
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 239  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  538 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 602  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 58311 - 58238
Alignment:
Q  165 agatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 238  Q
    ||||||| | |||||||||| |||||| |||  |||||||||||||| | |  | |||||||||||||||||||    
T  58311 agatatggtttatgatagaacattatgtcgtaatttgatccatgtagccgacccaacttagtgggataaggctt 58238  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 82904 - 82993
Alignment:
Q  154 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||  | ||||||| |||||||||| | |||| |||| |||||||||||||| | |  | ||||| ||| ||||||||||||||    
T  82904 gagttggatccaaatatgatttatgatagaacactatgacgtcatttgatccatgtagccgaccccacttaatggaataaggcttggttg 82993  T

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Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 48191 - 48123
Alignment:
Q  175 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttg 243  Q
    |||||||||| ||||||||||  |||||||||||||| | | || ||||||| |||| |||||| ||||    
T  48191 tatgatagaatattatggcgtaatttgatccatgtagccgactccacttagtaggattaggcttagttg 48123  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 2987 - 2943
Alignment:
Q  148 attaacgagttggatagagatatgatatatgatagaaaattatgg 192  Q
    ||||| ||||| |||||| |||||||||| |||||||||||||||    
T  2987 attaatgagtttgatagaaatatgatatacgatagaaaattatgg 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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