View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16918_low_2 (Length: 406)

Name: NF16918_low_2
Description: NF16918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16918_low_2
NF16918_low_2
[»] chr8 (22 HSPs)
chr8 (163-397)||(5783534-5783767)
chr8 (164-218)||(32195402-32195457)
chr8 (185-218)||(35115543-35115576)
chr8 (145-218)||(16010716-16010792)
chr8 (182-218)||(40844378-40844414)
chr8 (5-44)||(13155187-13155226)
chr8 (5-43)||(1778866-1778904)
chr8 (169-218)||(7578359-7578409)
chr8 (169-218)||(10755359-10755409)
chr8 (169-218)||(15719778-15719828)
chr8 (185-218)||(13232321-13232354)
chr8 (185-218)||(18549326-18549359)
chr8 (5-38)||(19963020-19963053)
chr8 (185-218)||(32418524-32418557)
chr8 (185-218)||(33526175-33526208)
chr8 (190-218)||(1163034-1163062)
chr8 (190-218)||(8094602-8094630)
chr8 (190-218)||(16789223-16789251)
chr8 (190-218)||(21125871-21125899)
chr8 (190-218)||(22917777-22917805)
chr8 (145-218)||(23360494-23360570)
chr8 (190-218)||(28398889-28398917)
[»] chr3 (37 HSPs)
chr3 (95-204)||(53632640-53632750)
chr3 (169-218)||(15016575-15016625)
chr3 (169-218)||(46186598-46186648)
chr3 (169-218)||(51500514-51500564)
chr3 (185-218)||(20405067-20405100)
chr3 (342-395)||(25305836-25305889)
chr3 (185-218)||(30268605-30268638)
chr3 (146-218)||(51058712-51058785)
chr3 (5-44)||(31869892-31869931)
chr3 (164-218)||(53719149-53719204)
chr3 (169-218)||(3830253-3830303)
chr3 (169-218)||(4513449-4513499)
chr3 (169-218)||(4814729-4814779)
chr3 (169-218)||(9863231-9863281)
chr3 (169-218)||(43440614-43440664)
chr3 (169-218)||(45320808-45320858)
chr3 (169-218)||(51759942-51759992)
chr3 (169-218)||(53701481-53701531)
chr3 (185-218)||(15286349-15286382)
chr3 (185-218)||(19844389-19844422)
chr3 (81-118)||(42447706-42447743)
chr3 (185-218)||(45006009-45006042)
chr3 (5-38)||(47005179-47005212)
chr3 (185-218)||(47114658-47114691)
chr3 (185-218)||(50196420-50196453)
chr3 (190-218)||(275564-275592)
chr3 (190-218)||(7518297-7518325)
chr3 (190-218)||(12673855-12673883)
chr3 (190-218)||(16123263-16123291)
chr3 (190-218)||(20612749-20612777)
chr3 (190-218)||(20907307-20907335)
chr3 (190-218)||(26800011-26800039)
chr3 (190-218)||(29446077-29446105)
chr3 (190-218)||(30130279-30130307)
chr3 (190-218)||(39288749-39288777)
chr3 (190-218)||(45161234-45161262)
chr3 (190-218)||(49670688-49670716)
[»] chr1 (33 HSPs)
chr1 (161-217)||(33067551-33067608)
chr1 (164-218)||(48730440-48730495)
chr1 (169-218)||(1811099-1811149)
chr1 (169-218)||(20756141-20756191)
chr1 (169-218)||(46868349-46868399)
chr1 (164-218)||(18079522-18079577)
chr1 (169-218)||(11822125-11822175)
chr1 (169-218)||(16083174-16083224)
chr1 (165-218)||(16097647-16097701)
chr1 (169-218)||(18899963-18900013)
chr1 (169-218)||(22919804-22919854)
chr1 (5-43)||(25658039-25658077)
chr1 (169-218)||(26191480-26191530)
chr1 (169-218)||(39303824-39303874)
chr1 (5-38)||(7867154-7867187)
chr1 (185-218)||(8364820-8364853)
chr1 (5-38)||(12322912-12322945)
chr1 (185-218)||(27521696-27521729)
chr1 (185-218)||(33380009-33380042)
chr1 (165-218)||(42483155-42483208)
chr1 (185-218)||(48609440-48609473)
chr1 (185-218)||(51986420-51986453)
chr1 (190-218)||(2733306-2733334)
chr1 (190-218)||(3679746-3679774)
chr1 (190-218)||(13260108-13260136)
chr1 (190-218)||(15335144-15335172)
chr1 (190-218)||(17984546-17984574)
chr1 (190-218)||(19622778-19622806)
chr1 (190-218)||(21391228-21391256)
chr1 (190-218)||(31258462-31258490)
chr1 (190-218)||(34383068-34383096)
chr1 (4-44)||(34808221-34808261)
chr1 (190-218)||(45290579-45290607)
[»] chr7 (26 HSPs)
chr7 (169-218)||(45671334-45671384)
chr7 (185-218)||(35665998-35666031)
chr7 (165-218)||(20355538-20355593)
chr7 (145-218)||(38186563-38186639)
chr7 (5-44)||(5308348-5308387)
chr7 (169-218)||(10358125-10358175)
chr7 (169-218)||(13769893-13769943)
chr7 (169-218)||(19465740-19465790)
chr7 (169-218)||(19757872-19757922)
chr7 (161-218)||(37952872-37952930)
chr7 (6-35)||(1271264-1271293)
chr7 (185-218)||(3808023-3808056)
chr7 (185-218)||(6589084-6589117)
chr7 (185-218)||(14543801-14543834)
chr7 (185-218)||(27458522-27458555)
chr7 (185-218)||(46759817-46759850)
chr7 (177-218)||(46829146-46829187)
chr7 (190-218)||(488835-488863)
chr7 (190-218)||(1559556-1559584)
chr7 (190-218)||(5308537-5308565)
chr7 (190-218)||(22871183-22871211)
chr7 (190-218)||(25547341-25547369)
chr7 (190-218)||(28911700-28911728)
chr7 (190-218)||(30709446-30709474)
chr7 (186-218)||(37527267-37527299)
chr7 (190-218)||(39833026-39833054)
[»] chr6 (21 HSPs)
chr6 (169-218)||(2373321-2373371)
chr6 (169-218)||(6468500-6468550)
chr6 (169-218)||(33131646-33131696)
chr6 (5-44)||(26375718-26375757)
chr6 (169-218)||(12612186-12612236)
chr6 (169-218)||(19275869-19275919)
chr6 (169-218)||(21995187-21995237)
chr6 (164-218)||(25121320-25121374)
chr6 (185-218)||(1214817-1214850)
chr6 (185-218)||(14428771-14428804)
chr6 (190-218)||(317931-317959)
chr6 (190-218)||(2616085-2616113)
chr6 (186-218)||(3276199-3276231)
chr6 (190-218)||(6591291-6591319)
chr6 (185-217)||(8169997-8170029)
chr6 (182-218)||(12298941-12298977)
chr6 (190-218)||(15116794-15116822)
chr6 (5-41)||(19320792-19320828)
chr6 (190-218)||(26375814-26375842)
chr6 (190-218)||(30928895-30928923)
chr6 (190-218)||(31398391-31398419)
[»] chr5 (30 HSPs)
chr5 (169-218)||(14318229-14318279)
chr5 (169-218)||(38786280-38786329)
chr5 (182-218)||(20661071-20661107)
chr5 (182-218)||(29366791-29366827)
chr5 (164-218)||(17070658-17070713)
chr5 (145-218)||(22551119-22551194)
chr5 (164-218)||(31602270-31602325)
chr5 (5-44)||(32108833-32108872)
chr5 (163-208)||(2032735-2032781)
chr5 (169-218)||(3850455-3850505)
chr5 (188-218)||(9532312-9532342)
chr5 (169-218)||(23382137-23382187)
chr5 (169-218)||(28863662-28863712)
chr5 (81-115)||(35605493-35605527)
chr5 (6-44)||(40029167-40029205)
chr5 (185-218)||(13990728-13990761)
chr5 (92-137)||(20416470-20416515)
chr5 (185-218)||(28213496-28213529)
chr5 (185-218)||(35609396-35609429)
chr5 (185-218)||(36973476-36973509)
chr5 (190-218)||(294042-294070)
chr5 (182-218)||(1104989-1105025)
chr5 (190-218)||(10409053-10409081)
chr5 (190-218)||(25779011-25779039)
chr5 (190-218)||(29151639-29151667)
chr5 (190-218)||(31037518-31037546)
chr5 (190-218)||(37090591-37090619)
chr5 (190-218)||(38496542-38496570)
chr5 (190-218)||(38962943-38962971)
chr5 (190-218)||(42207363-42207391)
[»] chr2 (23 HSPs)
chr2 (169-218)||(43597329-43597379)
chr2 (169-218)||(31326080-31326129)
chr2 (182-218)||(13850643-13850679)
chr2 (182-218)||(43592167-43592203)
chr2 (183-218)||(7121074-7121109)
chr2 (5-44)||(10375005-10375044)
chr2 (169-218)||(40786582-40786632)
chr2 (5-38)||(1138301-1138334)
chr2 (185-218)||(3832394-3832427)
chr2 (185-218)||(4042734-4042767)
chr2 (185-218)||(5164340-5164373)
chr2 (81-118)||(23862969-23863006)
chr2 (185-218)||(29182291-29182324)
chr2 (185-218)||(31909323-31909356)
chr2 (185-218)||(34317921-34317954)
chr2 (185-218)||(36815678-36815711)
chr2 (185-218)||(44993904-44993937)
chr2 (190-218)||(8046451-8046479)
chr2 (190-218)||(26707993-26708021)
chr2 (190-218)||(29865362-29865390)
chr2 (190-218)||(38731949-38731977)
chr2 (190-218)||(41693852-41693880)
chr2 (190-218)||(41791140-41791168)
[»] chr4 (28 HSPs)
chr4 (146-218)||(23950913-23950986)
chr4 (183-218)||(20292160-20292195)
chr4 (164-218)||(29420360-29420415)
chr4 (164-218)||(46292455-46292510)
chr4 (5-44)||(52430036-52430075)
chr4 (169-218)||(2180401-2180451)
chr4 (169-218)||(22099739-22099789)
chr4 (169-218)||(29463741-29463791)
chr4 (164-218)||(31182248-31182302)
chr4 (169-218)||(45593347-45593397)
chr4 (169-218)||(51545798-51545848)
chr4 (169-218)||(52441882-52441932)
chr4 (185-218)||(12791818-12791851)
chr4 (185-218)||(45505737-45505770)
chr4 (182-218)||(4211624-4211660)
chr4 (161-216)||(8191208-8191264)
chr4 (190-218)||(13479392-13479420)
chr4 (190-218)||(18135965-18135993)
chr4 (190-218)||(18830967-18830995)
chr4 (174-218)||(19321693-19321737)
chr4 (190-218)||(27008257-27008285)
chr4 (186-218)||(32365216-32365248)
chr4 (190-218)||(38054667-38054695)
chr4 (190-218)||(41920934-41920962)
chr4 (174-218)||(47135901-47135945)
chr4 (190-218)||(49123173-49123201)
chr4 (190-218)||(51708877-51708905)
chr4 (190-218)||(53717023-53717051)
[»] scaffold0016 (1 HSPs)
scaffold0016 (169-218)||(10278-10328)
[»] scaffold0002 (1 HSPs)
scaffold0002 (169-218)||(94180-94230)
[»] scaffold0472 (1 HSPs)
scaffold0472 (6-38)||(6972-7004)
[»] scaffold0105 (1 HSPs)
scaffold0105 (161-216)||(17783-17839)


Alignment Details
Target: chr8 (Bit Score: 172; Significance: 3e-92; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 163 - 397
Target Start/End: Complemental strand, 5783767 - 5783534
Alignment:
Q  163 ttttttctacaaaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaac--aagatgcccaacctttcatacttaaattggactttgcaaca 260  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||| ||    
T  5783767 ttttttctacaaaattgtacaatcatcatgtgtcatgtatgcaaatcatcacaaaactgaagatgtccaacttttcatacttaaattggactttgcacca 5783668  T
Q  261 atcaccgttattagccacgatcttcttcgcaatcttcaacggcttcctaacataaaacctaaccttcgccttcatgtatttcctccagaaactagtttta 360  Q
    |||||||  |||||||| |||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5783667 atcaccgccattagccatgatcttc---gcaatcttcaacggcttcctaacatcaaacctaaccttcgccttcatgtatttcctccagaaactagtttta 5783571  T
Q  361 ttgttcgcatcatactcaaggaactcaccagtataat 397  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5783570 ttgttcgcatcatactcaaggaactcaccaatataat 5783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 32195457 - 32195402
Alignment:
Q  164 tttttctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||| ||||    
T  32195457 tttttctacaaaataggttcaatcatcatgtgtcacgtatgcatatcatcataaaa 32195402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 35115543 - 35115576
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||||||||||||||||||||||    
T  35115543 tcatcatgtgtcacgtatgcaaatcatcacaaaa 35115576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 16010792 - 16010716
Alignment:
Q  145 caaaatattttgcat-aact-tttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||  |||| |||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||    
T  16010792 caaaatattttgcaggaactatttttctacaaaatggattcaatcatcatgagtcacgtgtacaaatcatcacaaaa 16010716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 40844378 - 40844414
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40844378 caatcatcatgtgccacgtatgcaaatcatcacaaaa 40844414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 13155226 - 13155187
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  13155226 caaatatgtctcgttttggttttaatccctgtaaaaaaaa 13155187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 1778904 - 1778866
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaa 43  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  1778904 caaatatgtctcgttttggttttaatccctgtaaaaaaa 1778866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 7578359 - 7578409
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  7578359 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 7578409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 10755359 - 10755409
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  10755359 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 10755409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 15719828 - 15719778
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  15719828 ctacaaaataggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 15719778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 13232354 - 13232321
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  13232354 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 13232321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 18549359 - 18549326
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  18549359 tcatcatgtgccacgtatgcaaatcatcacaaaa 18549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 19963020 - 19963053
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaa 38  Q
    |||||||||||||||||||||||| |||||||||    
T  19963020 caaatatgtctcgttttagttttagtccctgtaa 19963053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 32418524 - 32418557
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  32418524 tcatcatgtgccacgtatgcaaatcatcacaaaa 32418557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 33526208 - 33526175
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  33526208 tcatcatgtgccacgtatgcaaatcatcacaaaa 33526175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 1163062 - 1163034
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  1163062 atgtgtcacgtatgcaaatcatcacaaaa 1163034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 8094630 - 8094602
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  8094630 atgtgtcacgtatgcaaatcatcacaaaa 8094602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 16789223 - 16789251
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  16789223 atgtgtcacgtatgcaaatcatcacaaaa 16789251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 21125871 - 21125899
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  21125871 atgtgtcacgtatgcaaatcatcacaaaa 21125899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 22917777 - 22917805
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  22917777 atgtgtcacgtatgcaaatcatcacaaaa 22917805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 23360570 - 23360494
Alignment:
Q  145 caaaatattttgcat-aact-tttttctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||  |||| |||||||||||||| ||| |||||||||| || ||| | |||||||||||||||||    
T  23360570 caaaatattttgcaagaactatttttctacaaaataggttcaatcatcatatgccacatgtgcaaatcatcacaaaa 23360494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 28398889 - 28398917
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  28398889 atgtgtcacgtatgcaaatcatcacaaaa 28398917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 53632750 - 53632640
Alignment:
Q  95 acccactttcttgctgatttgtcctacttgtagcgactattttnnnnnnncaaaatattttgca-taacttttttctacaaaatg-gtacaatcatcatg 192  Q
    |||||||||||||||||||||||| | |||||   ||||||||       |||||||||||||| | |||||||||||||||||| | ||||||||||||    
T  53632750 acccactttcttgctgatttgtcccatttgtatgtactattttaaaaaa-caaaatattttgcagtgacttttttctacaaaatgagcacaatcatcatg 53632652  T
Q  193 tgtcacgtatgc 204  Q
    || |||||||||    
T  53632651 tgccacgtatgc 53632640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 15016575 - 15016625
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  15016575 ctacaaaatgggttcaatcatcatgtgccacgtatgcaaatcatcacaaaa 15016625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 46186598 - 46186648
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  46186598 ctacaaaatgggttcaatcatcatgtgccacgtatgcaaatcatcacaaaa 46186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 51500514 - 51500564
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  51500514 ctacaaaatgggtccagtcatcatgtgtcacgtatgcaaatcatcacaaaa 51500564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 20405067 - 20405100
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||||||||||||||||||||||    
T  20405067 tcatcatgtgtcacgtatgcaaatcatcacaaaa 20405100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 25305836 - 25305889
Alignment:
Q  342 cctccagaaactagttttattgttcgcatcatactcaaggaactcaccagtata 395  Q
    |||||||||||| |||| ||||||| ||||||||||||| ||||||||| ||||    
T  25305836 cctccagaaactggtttaattgttcacatcatactcaagaaactcaccaatata 25305889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 30268638 - 30268605
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||||||||||||||||||||||    
T  30268638 tcatcatgtgtcacgtatgcaaatcatcacaaaa 30268605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 51058785 - 51058712
Alignment:
Q  146 aaaatattttgcataacttttttctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||| |  |||||| || |||||| || || |||||||||||||| |||||||||||||||||||    
T  51058785 aaaatattttgcagagattttttttataaaatgagttcagtcatcatgtgtcacatatgcaaatcatcacaaaa 51058712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 31869931 - 31869892
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  31869931 caaatatgtctcgttttagttttagtccctgtaaaaaaaa 31869892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 53719149 - 53719204
Alignment:
Q  164 tttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| | || ||||||||| |||||| |||||||||||||||||    
T  53719149 tttttctacaaaatggattcagtcatcatgtatcacgtgtgcaaatcatcacaaaa 53719204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 3830303 - 3830253
Alignment:
Q  169 ctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| || || |||||||||| |||||||||||||||||||||||    
T  3830303 ctacaaaatgagttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 3830253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 4513449 - 4513499
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  4513449 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 4513499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 4814729 - 4814779
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  4814729 ctacaaaatgggtccagtcatcatgtgccacgtatgcaaatcatcacaaaa 4814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 9863231 - 9863281
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||||||    
T  9863231 ctacaaaattggttcaattataatgtgtcacgtatgcaaatcatcacaaaa 9863281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 43440664 - 43440614
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  43440664 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 43440614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 45320808 - 45320858
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||||||    
T  45320808 ctacaaaattggttcaattataatgtgtcacgtatgcaaatcatcacaaaa 45320858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 51759992 - 51759942
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  51759992 ctacaaaatgggtccagtcatcatgtgccacgtatgcaaatcatcacaaaa 51759942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 53701531 - 53701481
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  53701531 ctacaaaattggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 53701481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 15286349 - 15286382
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  15286349 tcatcatgtgccacgtatgcaaatcatcacaaaa 15286382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 19844422 - 19844389
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  19844422 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 19844389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 42447743 - 42447706
Alignment:
Q  81 aaaatagtctttgaacccactttcttgctgatttgtcc 118  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  42447743 aaaatagtccttggacccactttcttgctgatttgtcc 42447706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 45006042 - 45006009
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  45006042 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 45006009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 47005179 - 47005212
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaa 38  Q
    |||||||||||||||||||||||| |||||||||    
T  47005179 caaatatgtctcgttttagttttagtccctgtaa 47005212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 47114658 - 47114691
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  47114658 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 47114691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 50196453 - 50196420
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  50196453 tcatcatgtgccacgtatgcaaatcatcacaaaa 50196420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 275592 - 275564
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  275592 atgtgtcacgtatgcaaatcatcacaaaa 275564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 7518297 - 7518325
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  7518297 atgtgtcacgtatgcaaatcatcacaaaa 7518325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 12673855 - 12673883
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  12673855 atgtgtcacgtatgcaaatcatcacaaaa 12673883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 16123291 - 16123263
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  16123291 atgtgtcacgtatgcaaatcatcacaaaa 16123263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 20612749 - 20612777
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  20612749 atgtgtcacgtatgcaaatcatcacaaaa 20612777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 20907307 - 20907335
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  20907307 atgtgtcacgtatgcaaatcatcacaaaa 20907335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 26800039 - 26800011
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  26800039 atgtgtcacgtatgcaaatcatcacaaaa 26800011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 29446105 - 29446077
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  29446105 atgtgtcacgtatgcaaatcatcacaaaa 29446077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 30130307 - 30130279
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  30130307 atgtgtcacgtatgcaaatcatcacaaaa 30130279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 39288749 - 39288777
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  39288749 atgtgtcacgtatgcaaatcatcacaaaa 39288777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 45161262 - 45161234
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  45161262 atgtgtcacgtatgcaaatcatcacaaaa 45161234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 49670688 - 49670716
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  49670688 atgtgtcacgtatgcaaatcatcacaaaa 49670716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 33067551 - 33067608
Alignment:
Q  161 acttttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaa 217  Q
    ||||||||||||||||||| | || |||||||||| ||||||||||||||||||||||    
T  33067551 acttttttctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaa 33067608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 48730440 - 48730495
Alignment:
Q  164 tttttctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||| ||| || |||||||||||||||| |||||||||||||||||    
T  48730440 tttttctacaaaataggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaa 48730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 1811099 - 1811149
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  1811099 ctacaaaatgggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 1811149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 20756191 - 20756141
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  20756191 ctacaaaatgggttcaatcatcatgtgccacgtatgcaaatcatcacaaaa 20756141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 46868399 - 46868349
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  46868399 ctacaaaatgggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 46868349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 18079577 - 18079522
Alignment:
Q  164 tttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| | || |||||||||| ||||| |||||||||||||||||    
T  18079577 tttttctacaaaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaa 18079522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 11822175 - 11822125
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  11822175 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 11822125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 16083224 - 16083174
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  16083224 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 16083174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 16097647 - 16097701
Alignment:
Q  165 ttttctacaaaatggta-caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||  | || ||||||||||||||||||| ||||||||||||||    
T  16097647 ttttctacaaaatgagatcagtcatcatgtgtcacgtatggaaatcatcacaaaa 16097701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 18899963 - 18900013
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  18899963 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 18900013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 22919854 - 22919804
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  22919854 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 22919804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 25658039 - 25658077
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaa 43  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  25658039 caaatatgtctcgttttggttttaatccctgtaaaaaaa 25658077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 26191530 - 26191480
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  26191530 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 26191480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 39303824 - 39303874
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  39303824 ctacaaaatggattcagtcatcatgtgccacgtatgcaaatcatcacaaaa 39303874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 7867154 - 7867187
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaa 38  Q
    |||||||||||||||||||||||| |||||||||    
T  7867154 caaatatgtctcgttttagttttagtccctgtaa 7867187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 8364820 - 8364853
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  8364820 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 8364853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12322945 - 12322912
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaa 38  Q
    ||||||||||||||||| ||||||||||||||||    
T  12322945 caaatatgtctcgttttggttttaatccctgtaa 12322912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 27521729 - 27521696
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  27521729 tcatcatgtgccacgtatgcaaatcatcacaaaa 27521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 33380042 - 33380009
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  33380042 tcatcatgtgccacgtatgcaaatcatcacaaaa 33380009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 42483155 - 42483208
Alignment:
Q  165 ttttctacaaaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||  ||||||| || |||||||||| ||||| |||||||||||||||||    
T  42483155 ttttctaataaatggttcagtcatcatgtgacacgtgtgcaaatcatcacaaaa 42483208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 48609440 - 48609473
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  48609440 tcatcatgtgccacgtatgcaaatcatcacaaaa 48609473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 51986420 - 51986453
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  51986420 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 51986453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 2733334 - 2733306
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  2733334 atgtgtcacgtatgcaaatcatcacaaaa 2733306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 3679774 - 3679746
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  3679774 atgtgtcacgtatgcaaatcatcacaaaa 3679746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 13260136 - 13260108
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  13260136 atgtgtcacgtatgcaaatcatcacaaaa 13260108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 15335144 - 15335172
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  15335144 atgtgtcacgtatgcaaatcatcacaaaa 15335172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 17984546 - 17984574
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  17984546 atgtgtcacgtatgcaaatcatcacaaaa 17984574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 19622806 - 19622778
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  19622806 atgtgtcacgtatgcaaatcatcacaaaa 19622778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 21391228 - 21391256
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  21391228 atgtgtcacgtatgcaaatcatcacaaaa 21391256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 31258490 - 31258462
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  31258490 atgtgtcacgtatgcaaatcatcacaaaa 31258462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 34383096 - 34383068
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  34383096 atgtgtcacgtatgcaaatcatcacaaaa 34383068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 34808221 - 34808261
Alignment:
Q  4 tcaaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    |||||||||||||||||| |||||| ||||||||| |||||    
T  34808221 tcaaatatgtctcgttttggttttagtccctgtaaaaaaaa 34808261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 45290607 - 45290579
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  45290607 atgtgtcacgtatgcaaatcatcacaaaa 45290579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 45671384 - 45671334
Alignment:
Q  169 ctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| || || ||||||||||||||||||||||||||||||||||    
T  45671384 ctacaaaatgagttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 45671334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 35666031 - 35665998
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||||||||||||||||||||||    
T  35666031 tcatcatgtgtcacgtatgcaaatcatcacaaaa 35665998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 20355593 - 20355538
Alignment:
Q  165 ttttctacaaaat--ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||  ||| ||||||||||||||||||| | |||||||||||||||    
T  20355593 ttttctacaaaattgggttcaatcatcatgtgtcacgtgtacaaatcatcacaaaa 20355538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 38186563 - 38186639
Alignment:
Q  145 caaaatattttgcata-acttttt-tctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||  ||| ||| |||||||||||| | || |||||||||||||||| |||||||||||||||||    
T  38186563 caaaatattttgcatggactatttatctacaaaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaa 38186639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 5308348 - 5308387
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  5308348 caaatatgtctcgttttagttttagtccctgtaaaaaaaa 5308387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 10358175 - 10358125
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  10358175 ctacaaaattggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 10358125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 13769943 - 13769893
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  13769943 ctacaaaataggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 13769893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 19465790 - 19465740
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  19465790 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 19465740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 19757922 - 19757872
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  19757922 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 19757872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 37952872 - 37952930
Alignment:
Q  161 acttttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| ||||||| | |||||||||||||  |||||||||||| |||||||||    
T  37952872 acttttttctataaaatggattcaatcatcatgtgctacgtatgcaaataatcacaaaa 37952930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 1271264 - 1271293
Alignment:
Q  6 aaatatgtctcgttttagttttaatccctg 35  Q
    ||||||||||||||||||||||||||||||    
T  1271264 aaatatgtctcgttttagttttaatccctg 1271293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 3808023 - 3808056
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  3808023 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 3808056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 6589117 - 6589084
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  6589117 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 6589084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 14543834 - 14543801
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  14543834 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 14543801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 27458555 - 27458522
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  27458555 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 27458522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 46759817 - 46759850
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  46759817 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 46759850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 46829146 - 46829187
Alignment:
Q  177 tggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||| |||||||||||||||| || |||||||||||||||||    
T  46829146 tggttcaatcatcatgtgtcatgtgtgcaaatcatcacaaaa 46829187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 488863 - 488835
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  488863 atgtgtcacgtatgcaaatcatcacaaaa 488835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 1559556 - 1559584
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  1559556 atgtgtcacgtatgcaaatcatcacaaaa 1559584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 5308537 - 5308565
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  5308537 atgtgtcacgtatgcaaatcatcacaaaa 5308565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 22871211 - 22871183
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  22871211 atgtgtcacgtatgcaaatcatcacaaaa 22871183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 25547341 - 25547369
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  25547341 atgtgtcacgtatgcaaatcatcacaaaa 25547369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 28911728 - 28911700
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  28911728 atgtgtcacgtatgcaaatcatcacaaaa 28911700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 30709474 - 30709446
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  30709474 atgtgtcacgtatgcaaatcatcacaaaa 30709446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 37527267 - 37527299
Alignment:
Q  186 catcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||| |||||||||||||||||    
T  37527267 catcatgtgtcacgtgtgcaaatcatcacaaaa 37527299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 39833054 - 39833026
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  39833054 atgtgtcacgtatgcaaatcatcacaaaa 39833026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 2373321 - 2373371
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  2373321 ctacaaaatgggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 2373371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 6468500 - 6468550
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  6468500 ctacaaaattggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 6468550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 33131696 - 33131646
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  33131696 ctacaaaatcggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 33131646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 26375718 - 26375757
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  26375718 caaatatgtctcgttttggttttaatccctgtaaaaaaaa 26375757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 12612186 - 12612236
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  12612186 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 12612236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 19275869 - 19275919
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  19275869 ctacaaaataggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 19275919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 21995237 - 21995187
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  21995237 ctacaaaataggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 21995187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 25121320 - 25121374
Alignment:
Q  164 tttttctacaaaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||  ||||||  || |||||||||||||||| |||||||||||||||||    
T  25121320 tttttctaataaatgggtcagtcatcatgtgtcacgtgtgcaaatcatcacaaaa 25121374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 1214850 - 1214817
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  1214850 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 1214817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 14428804 - 14428771
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  14428804 tcatcatgtgccacgtatgcaaatcatcacaaaa 14428771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 317959 - 317931
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  317959 atgtgtcacgtatgcaaatcatcacaaaa 317931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 2616085 - 2616113
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  2616085 atgtgtcacgtatgcaaatcatcacaaaa 2616113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 3276199 - 3276231
Alignment:
Q  186 catcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||| |||||||||||||||||    
T  3276199 catcatgtgtcacgtgtgcaaatcatcacaaaa 3276231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 6591291 - 6591319
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  6591291 atgtgtcacgtatgcaaatcatcacaaaa 6591319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 8169997 - 8170029
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaa 217  Q
    |||||||||||||||| ||||||||||||||||    
T  8169997 tcatcatgtgtcacgtgtgcaaatcatcacaaa 8170029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 12298977 - 12298941
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  12298977 caatcatcatgtgccacgtgtgcaaatcatcacaaaa 12298941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 15116822 - 15116794
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  15116822 atgtgtcacgtatgcaaatcatcacaaaa 15116794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 19320792 - 19320828
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaa 41  Q
    |||||||||||| |||| |||||||||||||||||||    
T  19320792 caaatatgtctcattttggttttaatccctgtaagaa 19320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 26375842 - 26375814
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  26375842 atgtgtcacgtatgcaaatcatcacaaaa 26375814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 30928895 - 30928923
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  30928895 atgtgtcacgtatgcaaatcatcacaaaa 30928923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 31398391 - 31398419
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  31398391 atgtgtcacgtatgcaaatcatcacaaaa 31398419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 14318229 - 14318279
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  14318229 ctacaaaatgggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 14318279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 38786329 - 38786280
Alignment:
Q  169 ctacaaaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||| || | || |||||||||||||||||||||||||||||    
T  38786329 ctacaaaatggttcagttataatgtgtcacgtatgcaaatcatcacaaaa 38786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 20661107 - 20661071
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20661107 caatcatcatgtgtcacgtgtgcaaatcatcacaaaa 20661071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 29366791 - 29366827
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||| ||||||||||||||    
T  29366791 caatcatcatgtgtcacgtatgtaaatcatcacaaaa 29366827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 17070713 - 17070658
Alignment:
Q  164 tttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| | || |||||||||| ||||| |||||||||||||||||    
T  17070713 tttttctacaaaatggattcattcatcatgtgccacgtgtgcaaatcatcacaaaa 17070658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 22551119 - 22551194
Alignment:
Q  145 caaaatattttgcat-aacttttttctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||  ||||||||||||||||||| || || |||||||||  ||||||||||  |||||||||||    
T  22551119 caaaatattttgcaggaacttttttctacaaaatgagttcagtcatcatgtaccacgtatgcagctcatcacaaaa 22551194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 31602325 - 31602270
Alignment:
Q  164 tttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| | |||| |||||||| ||||| |||||||||||||||||    
T  31602325 tttttctacaaaatgggttcaattatcatgtgccacgtgtgcaaatcatcacaaaa 31602270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 32108833 - 32108872
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  32108833 caaatatgtttcgttttagttttaatccctgtaaaaaaaa 32108872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 2032781 - 2032735
Alignment:
Q  163 ttttttctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaat 208  Q
    |||||||||||||||| || || ||||||||||||||||||||||||    
T  2032781 ttttttctacaaaatgtgttcagtcatcatgtgtcacgtatgcaaat 2032735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 3850455 - 3850505
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  3850455 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 3850505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 9532342 - 9532312
Alignment:
Q  188 tcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||||    
T  9532342 tcatgtgtcacgtatgcaaatcatcacaaaa 9532312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 23382137 - 23382187
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||||||    
T  23382137 ctacaaaattggttcaattataatgtgtcacgtatgcaaatcatcacaaaa 23382187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 28863662 - 28863712
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  28863662 ctacaaaatcggttcagtcatcatgtgacacgtatgcaaatcatcacaaaa 28863712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 35605527 - 35605493
Alignment:
Q  81 aaaatagtctttgaacccactttcttgctgatttg 115  Q
    |||||||||| ||||||||||||||||||||||||    
T  35605527 aaaatagtctctgaacccactttcttgctgatttg 35605493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 40029167 - 40029205
Alignment:
Q  6 aaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  40029167 aaatatgtctcgttttggttttaatccctgtaaaaaaaa 40029205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 13990761 - 13990728
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  13990761 tcatcatgtgccacgtatgcaaatcatcacaaaa 13990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 20416470 - 20416515
Alignment:
Q  92 tgaacccactttcttgctgatttgtcctacttgtagcgactatttt 137  Q
    |||||||||||||| |||||||||||| | |||||| |||||||||    
T  20416470 tgaacccactttctagctgatttgtcccatttgtagggactatttt 20416515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 28213529 - 28213496
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  28213529 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 28213496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 35609429 - 35609396
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  35609429 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 35609396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 36973509 - 36973476
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  36973509 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 36973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 294042 - 294070
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  294042 atgtgtcacgtatgcaaatcatcacaaaa 294070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 1104989 - 1105025
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  1104989 caatcatcatgtgccacgtgtgcaaatcatcacaaaa 1105025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 10409081 - 10409053
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  10409081 atgtgtcacgtatgcaaatcatcacaaaa 10409053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 25779011 - 25779039
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  25779011 atgtgtcacgtatgcaaatcatcacaaaa 25779039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 29151667 - 29151639
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  29151667 atgtgtcacgtatgcaaatcatcacaaaa 29151639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 31037546 - 31037518
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  31037546 atgtgtcacgtatgcaaatcatcacaaaa 31037518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 37090591 - 37090619
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  37090591 atgtgtcacgtatgcaaatcatcacaaaa 37090619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 38496570 - 38496542
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  38496570 atgtgtcacgtatgcaaatcatcacaaaa 38496542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 38962943 - 38962971
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  38962943 atgtgtcacgtatgcaaatcatcacaaaa 38962971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 42207391 - 42207363
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  42207391 atgtgtcacgtatgcaaatcatcacaaaa 42207363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 43597329 - 43597379
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  43597329 ctacaaaatgggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaa 43597379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 31326080 - 31326129
Alignment:
Q  169 ctacaaaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||  || |||||||||| |||||||||||||||||||||||    
T  31326080 ctacaaaatgggccagtcatcatgtgccacgtatgcaaatcatcacaaaa 31326129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 13850679 - 13850643
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13850679 caatcatcatgtgtcacgtgtgcaaatcatcacaaaa 13850643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 43592203 - 43592167
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43592203 caatcatcatgtgccacgtatgcaaatcatcacaaaa 43592167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 7121109 - 7121074
Alignment:
Q  183 aatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||| |||||||||||||||||    
T  7121109 aatcatcatgtgtcacgtgtgcaaatcatcacaaaa 7121074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 10375044 - 10375005
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  10375044 caaatatgtctcgttttggttttaatccctgtaaaaaaaa 10375005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 40786632 - 40786582
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||||||    
T  40786632 ctacaaaattggttcaattataatgtgtcacgtatgcaaatcatcacaaaa 40786582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 1138334 - 1138301
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaa 38  Q
    |||||||||||||||||||||||| |||||||||    
T  1138334 caaatatgtctcgttttagttttagtccctgtaa 1138301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 3832427 - 3832394
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  3832427 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 3832394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 4042734 - 4042767
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  4042734 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 4042767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 5164340 - 5164373
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  5164340 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 5164373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 23863006 - 23862969
Alignment:
Q  81 aaaatagtctttgaacccactttcttgctgatttgtcc 118  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  23863006 aaaatagtctttggacccactttattgctgatttgtcc 23862969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 29182324 - 29182291
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  29182324 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 29182291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 31909323 - 31909356
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  31909323 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 31909356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 34317954 - 34317921
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  34317954 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 34317921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 36815678 - 36815711
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  36815678 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 36815711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 44993904 - 44993937
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  44993904 tcatcatgtgccacgtatgcaaatcatcacaaaa 44993937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 8046479 - 8046451
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  8046479 atgtgtcacgtatgcaaatcatcacaaaa 8046451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 26708021 - 26707993
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  26708021 atgtgtcacgtatgcaaatcatcacaaaa 26707993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 29865362 - 29865390
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  29865362 atgtgtcacgtatgcaaatcatcacaaaa 29865390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 38731977 - 38731949
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  38731977 atgtgtcacgtatgcaaatcatcacaaaa 38731949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 41693852 - 41693880
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  41693852 atgtgtcacgtatgcaaatcatcacaaaa 41693880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 41791168 - 41791140
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  41791168 atgtgtcacgtatgcaaatcatcacaaaa 41791140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 23950986 - 23950913
Alignment:
Q  146 aaaatattttgcataacttttttctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| ||| |||||||||||||||||| |  || |||||| |||||||||||| |||||| |||||||    
T  23950986 aaaatattttacatgacttttttctacaaaatgagatcagtcatcaggtgtcacgtatggaaatcagcacaaaa 23950913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 20292160 - 20292195
Alignment:
Q  183 aatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||| |||||||||||||||||    
T  20292160 aatcatcatgtgtcacgtgtgcaaatcatcacaaaa 20292195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 29420360 - 29420415
Alignment:
Q  164 tttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||| ||||||||||| | ||||||||||||| |||||||||| ||||||||||||    
T  29420360 ttttcctacaaaatgggttcaatcatcatgtgccacgtatgcatatcatcacaaaa 29420415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 46292510 - 46292455
Alignment:
Q  164 tttttctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |  | |||||||||||||||| |||||||||||||||||    
T  46292510 tttttctacaaaatggatttagtcatcatgtgtcacgtgtgcaaatcatcacaaaa 46292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 52430075 - 52430036
Alignment:
Q  5 caaatatgtctcgttttagttttaatccctgtaagaaaaa 44  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  52430075 caaatatgtctcgttttagttttagtccctgtaaaaaaaa 52430036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 2180401 - 2180451
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  2180401 ctacaaaataggttcagtcatcatgtctcacgtatgcaaatcatcacaaaa 2180451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 22099739 - 22099789
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  22099739 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 22099789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 29463741 - 29463791
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||||||    
T  29463741 ctacaaaattggttcaattataatgtgtcacgtatgcaaatcatcacaaaa 29463791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 31182302 - 31182248
Alignment:
Q  164 tttttctacaaaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||  |||| || ||||||||||||||||||| |||||||||| ||||||    
T  31182302 tttttctaataaatagttcaatcatcatgtgtcacgtgtgcaaatcattacaaaa 31182248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 45593397 - 45593347
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  45593397 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 45593347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 51545798 - 51545848
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  51545798 ctacaaaatcggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 51545848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 52441932 - 52441882
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||| |||||||||||||||||||||||||||    
T  52441932 ctacaaaatgggttcagtcatcacgtgtcacgtatgcaaatcatcacaaaa 52441882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 12791818 - 12791851
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||| |||||||||||||||||    
T  12791818 tcatcatgtgtcacgtgtgcaaatcatcacaaaa 12791851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 45505737 - 45505770
Alignment:
Q  185 tcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||| |||||||||||||||||||||||    
T  45505737 tcatcatgtgccacgtatgcaaatcatcacaaaa 45505770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 4211660 - 4211624
Alignment:
Q  182 caatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  4211660 caatcatcatgtgccacgtgtgcaaatcatcacaaaa 4211624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 8191208 - 8191264
Alignment:
Q  161 acttttttctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaatcatcacaa 216  Q
    |||||||||||||||||| || || ||| |||||  |||||||||||||||||||||    
T  8191208 acttttttctacaaaatgagttcagtcaccatgtaccacgtatgcaaatcatcacaa 8191264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 13479420 - 13479392
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  13479420 atgtgtcacgtatgcaaatcatcacaaaa 13479392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 18135965 - 18135993
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  18135965 atgtgtcacgtatgcaaatcatcacaaaa 18135993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 18830995 - 18830967
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  18830995 atgtgtcacgtatgcaaatcatcacaaaa 18830967  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 19321737 - 19321693
Alignment:
Q  174 aaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||| || |||||||||||||||| ||||||| |||||||||    
T  19321737 aaatggttcagtcatcatgtgtcacgtgtgcaaattatcacaaaa 19321693  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 27008257 - 27008285
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  27008257 atgtgtcacgtatgcaaatcatcacaaaa 27008285  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 32365248 - 32365216
Alignment:
Q  186 catcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| |||||||||||||||||||||||    
T  32365248 catcatgtgccacgtatgcaaatcatcacaaaa 32365216  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 38054695 - 38054667
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  38054695 atgtgtcacgtatgcaaatcatcacaaaa 38054667  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 41920934 - 41920962
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  41920934 atgtgtcacgtatgcaaatcatcacaaaa 41920962  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 47135945 - 47135901
Alignment:
Q  174 aaatggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||| || |||||||||| ||||| |||||||||||||||||    
T  47135945 aaatggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaa 47135901  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 49123173 - 49123201
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  49123173 atgtgtcacgtatgcaaatcatcacaaaa 49123201  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 51708877 - 51708905
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  51708877 atgtgtcacgtatgcaaatcatcacaaaa 51708905  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 53717023 - 53717051
Alignment:
Q  190 atgtgtcacgtatgcaaatcatcacaaaa 218  Q
    |||||||||||||||||||||||||||||    
T  53717023 atgtgtcacgtatgcaaatcatcacaaaa 53717051  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 10328 - 10278
Alignment:
Q  169 ctacaaaat-ggtacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||||||    
T  10328 ctacaaaattggttcaattataatgtgtcacgtatgcaaatcatcacaaaa 10278  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 94230 - 94180
Alignment:
Q  169 ctacaaaatgg-tacaatcatcatgtgtcacgtatgcaaatcatcacaaaa 218  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  94230 ctacaaaatgggttcagtcatcatgtgccacgtatgcaaatcatcacaaaa 94180  T

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Target: scaffold0472 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 6972 - 7004
Alignment:
Q  6 aaatatgtctcgttttagttttaatccctgtaa 38  Q
    ||||||||||| |||||||||||||||||||||    
T  6972 aaatatgtctcattttagttttaatccctgtaa 7004  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 17783 - 17839
Alignment:
Q  161 acttttttctacaaaatg-gtacaatcatcatgtgtcacgtatgcaaatcatcacaa 216  Q
    |||||||||||||||||| || || ||| |||||  |||||||||||||||||||||    
T  17783 acttttttctacaaaatgagttcagtcaccatgtaccacgtatgcaaatcatcacaa 17839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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