View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16919_low_1 (Length: 999)
Name: NF16919_low_1
Description: NF16919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16919_low_1 |
 | |
|
| [»] chr6 (18 HSPs) |
| |
|
| [»] scaffold0144 (1 HSPs) |
| | |
|
| [»] scaffold0133 (2 HSPs) |
| | |
|
| [»] scaffold0230 (1 HSPs) |
| | |
|
| [»] scaffold0511 (1 HSPs) |
| | |
|
| [»] scaffold0256 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 841; Significance: 0; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 841; E-Value: 0
Query Start/End: Original strand, 1 - 999
Target Start/End: Complemental strand, 16868139 - 16867142
Alignment:
| Q |
1 |
gatgtcatcatcaaataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16868139 |
gatgtcatcatcagataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
16868040 |
T |
|
| Q |
101 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
16868039 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaatactttttgttttgcaaaattt |
16867940 |
T |
|
| Q |
201 |
cttgaaccnnnnnnnnccttgactctaaagacaagagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatc |
300 |
Q |
| |
|
|||||||| | | |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16867939 |
cttgaaccttttttctcaaggtttctaaagacaagagatctagattttttccaatggtgttttctgtgatggactctaaaattttcatcaaactgaaatc |
16867840 |
T |
|
| Q |
301 |
atccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacg |
400 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16867839 |
gtccgaaacacac--ccatattttcaagtcaaaatgtgtttttaccctttcatcattgaagaccacttgagcgagtgttgtttttccttgtccgccaaca |
16867742 |
T |
|
| Q |
401 |
ccaacaatggaacagacagagagttcttcactgtcgctagcatttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggtt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16867741 |
ccaacaatggaacagacagagagttcttcactgtcgctagcatttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggtt |
16867642 |
T |
|
| Q |
501 |
cggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagc |
600 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
16867641 |
cggtaacaatagaaatagtttggcgccattcatcatctcctcgttggtgctcctctgtgactcccactagttgaaatccaaacttgatcctttcttcagc |
16867542 |
T |
|
| Q |
601 |
aatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcct |
700 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16867541 |
aatatcatcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcataggatggaaactagtgatgcacttgttgcct |
16867442 |
T |
|
| Q |
701 |
ccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttg |
800 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16867441 |
ccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagcgtcacccagtttttgcagccagttcctcacaggatcgtttg |
16867342 |
T |
|
| Q |
801 |
ttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaat |
900 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16867341 |
ttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagtttctgggtcaattctccaacacccaaaaaggatgcaat |
16867242 |
T |
|
| Q |
901 |
ctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaaatgaaac-aggtttggttt |
999 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16867241 |
ctcctctcgaacaaaagatccaaggttttctatcacgattccaatcaaagcttcagccattttgtaggtatgagaacagaaatgaaacaaggtttggttt |
16867142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 840; E-Value: 0
Query Start/End: Original strand, 1 - 999
Target Start/End: Original strand, 16658034 - 16659033
Alignment:
| Q |
1 |
gatgtcatcatcaaataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658034 |
gatgtcatcatcagataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
16658133 |
T |
|
| Q |
101 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658134 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatat |
16658233 |
T |
|
| Q |
201 |
cttgaaccnnnnnnnnccttgactctaaagacaagagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatc |
300 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
16658234 |
cttgaaccttttttttccttgactctaaagacaagagatctaggttttttccaatggtgttttctatgatggactctaaaattttcagtaaactgaaatc |
16658333 |
T |
|
| Q |
301 |
atccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacg |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658334 |
atccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgaagaccatttgagcgagtgttgtttttccttgtccgccaaca |
16658433 |
T |
|
| Q |
401 |
ccaacaatggaacagacagagagttcttcactgtcgctagcatttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggtt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658434 |
ccaacaatggaacagacagagagttcttcactgtcgctagcatttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggtt |
16658533 |
T |
|
| Q |
501 |
cggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagc |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
16658534 |
cggtgacagtagaaatagtttggcgccattcatcatctcctcgttgctgctcctctgtgactcccaccagttgaaatccaaacttgatcctttcttcagc |
16658633 |
T |
|
| Q |
601 |
aatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcct |
700 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
16658634 |
aatatcatcaatccttttagcaacctccttcatcctctttccaatgttacgacgagccaaaatcttcataggatgaaaactagtgatgcacttgttgcct |
16658733 |
T |
|
| Q |
701 |
ccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttg |
800 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
16658734 |
ccatgtgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagcgtcacccagtttttgcagccagttcctcacaagatcgtttg |
16658833 |
T |
|
| Q |
801 |
ttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaat |
900 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||| ||||| ||| || |||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658834 |
ttatttgcttcttttcagcatcttttagtacagcacgaattgcagtgagatttccagatagcctttgggtcaattctccaacacccaaaaaggatgcaat |
16658933 |
T |
|
| Q |
901 |
ctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaaatgaaac-aggtttggttt |
999 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16658934 |
ctcctctcgaacaaaagatccgaggttttctatcacgattccaagtaaagcttcagccattttgtaggtatgagaacagaaatgaaacaaggtttggttt |
16659033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 683; E-Value: 0
Query Start/End: Original strand, 1 - 962
Target Start/End: Original strand, 17069528 - 17070492
Alignment:
| Q |
1 |
gatgtcatcatcaaataactgtgctaaaggatgaacctta---gttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacct |
97 |
Q |
| |
|
||||||||||||| ||||| ||| |||||||||| | | | ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
17069528 |
gatgtcatcatcagataaccgtgataaaggatgagcatcatgagttcccatgatggatgcaacaatgtcaagtctggtagtgactaaaattgatgcacct |
17069627 |
T |
|
| Q |
98 |
ttctttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaa |
197 |
Q |
| |
|
||||||||| | | ||||||||||| || ||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17069628 |
ttctttccatttggtaacaaagacttgaagctattccatttcacttggtcatcactccacacatcatcaagaacaagcaaataccttttgctttgcaaaa |
17069727 |
T |
|
| Q |
198 |
tatcttgaaccnnnnnnnnccttgactctaaagacaagagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaa |
297 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17069728 |
tttcttgaacctttttttgccttgactctaaagacaagagatctagattttttccaatggtgttttctatgatggactctaaaattttcatcaaactgaa |
17069827 |
T |
|
| Q |
298 |
atcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgcca |
397 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17069828 |
atcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgcca |
17069927 |
T |
|
| Q |
398 |
acgccaacaatggaacagacagagagttcttcactgtcgctagcatttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcg |
497 |
Q |
| |
|
|| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17069928 |
acaccaacaatggaatagacagagagttcttcactgtcactagcatttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcg |
17070027 |
T |
|
| Q |
498 |
gttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttc |
597 |
Q |
| |
|
||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||| |
|
|
| T |
17070028 |
gttcggtgatagcagaaatagtttggatctgttcatcatctcctcgttggtgctcctccgtgactcccaccggttgaaatccatactcgatcctttcttt |
17070127 |
T |
|
| Q |
598 |
agcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttg |
697 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||| |
|
|
| T |
17070128 |
agcaatatcgtcaatccttttagcaacctccttcatcctctttccaatgttgcgatgagccaaaatcttcattggatggaaacgggtgatgcacttgttg |
17070227 |
T |
|
| Q |
698 |
cctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgt |
797 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| | ||||| |||| |
|
|
| T |
17070228 |
ccttcatgtgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgc |
17070327 |
T |
|
| Q |
798 |
ttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgc |
897 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17070328 |
ttgttatctgcttcttttcagcatcttttagtacagcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgc |
17070427 |
T |
|
| Q |
898 |
aatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17070428 |
aatctcctctcgaacaaaagatccgaggttttcaatcacgattccaagtaaagcttcagccattt |
17070492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 667; E-Value: 0
Query Start/End: Original strand, 1 - 962
Target Start/End: Original strand, 16797191 - 16798155
Alignment:
| Q |
1 |
gatgtcatcatcaaataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
100 |
Q |
| |
|
||||||||||||| ||||| ||| |||| ||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
16797191 |
gatgtcatcatcagataaccgtgttaaatgatgaacataagttcccatgatggatgcaacaatgtcaagtctggtagtgaccaaaattgatgcacctttc |
16797290 |
T |
|
| Q |
101 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatat |
200 |
Q |
| |
|
|||||| | ||||||| ||||| ||| ||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
16797291 |
tttccatttggcaacaatgacttgaacgtattccatttcacttggtcatcactccacacatcatcaagaacaagcaaatacctttggttttgcaaaattt |
16797390 |
T |
|
| Q |
201 |
cttgaaccnnnnnnnnccttgactctaaagacaagagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatc |
300 |
Q |
| |
|
|||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
16797391 |
cttgaaccttttttcgcaaggactctaaagacaagagttctagattttttccaatggtgttttctatgatagactctaaaattttcatcaaactgaaatc |
16797490 |
T |
|
| Q |
301 |
atccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacg |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16797491 |
atccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccacttgagcgagtgttgtttttccttgtccgccaaca |
16797590 |
T |
|
| Q |
401 |
ccaacaatggaacagacagagagttcttcactgtcgctagcatt---tagaagaaactctacaatctgctctttatctttgtctcttccatatactttcg |
497 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
16797591 |
ccaacaatggaatagacagagagttcttcactggtactagcatgccctagaagaaactctacaatctgttctttatctttgtctcttccatatacttttg |
16797690 |
T |
|
| Q |
498 |
gttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttc |
597 |
Q |
| |
|
|||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16797691 |
gttcggtgacagcagaagtagttaggatccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttc |
16797790 |
T |
|
| Q |
598 |
agcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttg |
697 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||||| |
|
|
| T |
16797791 |
agcaatatcatcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaattttcattggatgaaaacgggtgatgcacttgttg |
16797890 |
T |
|
| Q |
698 |
cctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgt |
797 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| || |||| |||| |
|
|
| T |
16797891 |
ccttcatgtgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagcatcacccaatttctgcagccatttttgcacaacatcgc |
16797990 |
T |
|
| Q |
798 |
ttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgc |
897 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16797991 |
ttgttatctgcttcttttcagcatcttttagtacagcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgc |
16798090 |
T |
|
| Q |
898 |
aatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
16798091 |
aatctcctctcgaacaaaagatccgaggttttcaatcacgattccaattaaagcgtcagccattt |
16798155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 592; E-Value: 0
Query Start/End: Original strand, 1 - 830
Target Start/End: Original strand, 16837702 - 16838535
Alignment:
| Q |
1 |
gatgtcatcatcaaataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16837702 |
gatgtcatcatcagataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
16837801 |
T |
|
| Q |
101 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatat |
200 |
Q |
| |
|
|||||| | ||||||||||||| ||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16837802 |
tttccatttggcaacaaagacttgaacgtattccatttcacttggtcatcactccacacatcatcaagaacaagcaaataccttttgttttgcaaaattt |
16837901 |
T |
|
| Q |
201 |
cttgaaccnnnnnnnnccttgactctaaagacaagagatctaggtttttt-ccaatggtgttttctaggatggactctaaaattttcatcaaactgaaat |
299 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16837902 |
cttgaaccttttttcgcaaggactctaaagacaagagatctagatttttttccaatggtgttttctatgatggactctaaaattttcatcaaactgaaat |
16838001 |
T |
|
| Q |
300 |
catccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaac |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16838002 |
catccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccacttgagcgagtgttgtttttccttgtccgccaac |
16838101 |
T |
|
| Q |
400 |
gccaacaatggaacagacagagagttcttcactgtcgctagcatt---tagaagaaactctacaatctgctctttatctttgtctcttccatatactttc |
496 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16838102 |
accaacaatggaatagacagagagttcttcactgttactagcatgccctataagaaactctacaatctgctctttatctttgtctcttccatatactttt |
16838201 |
T |
|
| Q |
497 |
ggttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttctt |
596 |
Q |
| |
|
||||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16838202 |
ggttcggtgacagcagaagtagttaggatccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttctt |
16838301 |
T |
|
| Q |
597 |
cagcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgtt |
696 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||| |
|
|
| T |
16838302 |
cagcaatatcatcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgtt |
16838401 |
T |
|
| Q |
697 |
gcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcg |
796 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| | ||||| || | |
|
|
| T |
16838402 |
gccttcatgtgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacattg |
16838501 |
T |
|
| Q |
797 |
tttgttatttgcttcttttcagcatcttttagta |
830 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||| |
|
|
| T |
16838502 |
cttgttatctgcttcttttcggcatcttttagta |
16838535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 40 - 986
Target Start/End: Original strand, 16987518 - 16988457
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttctttccaagttgcaacaaagactttaacttattccatttc |
139 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||| ||| | |||||||| |||||| ||||||||||||||| |
|
|
| T |
16987518 |
agttcccatgatggatgcaacattgtcaagtctggtggtgaccaaaactgatgcacctttcgttctattttgcaacacagacttgaacttattccatttc |
16987617 |
T |
|
| Q |
140 |
tcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagacaagagat |
239 |
Q |
| |
|
||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| | ||| |||||||| | |||||||||||||| |||||| |
|
|
| T |
16987618 |
tctcggtcttcagtccacacatcatcaagaacaagtaaataccttttgttttgtagaatttcttgaacatttttttgcattgactctaaagacgagagat |
16987717 |
T |
|
| Q |
240 |
ctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgt |
339 |
Q |
| |
|
| | ||||||||||| |||||||| | ||| |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16987718 |
gtggattttttccaatagtgttttcaatgatcgactctaaaactttcatcatactgaaatcatcagaaacacacacccatattttcaagtcaaaatgtgt |
16987817 |
T |
|
| Q |
340 |
ttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgcta |
439 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| |||| ||||||||| | ||| || ||||||||||||| |||||||||||| ||||||||| ||| |
|
|
| T |
16987818 |
ctttacactttcatcattgaagaccatttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagagagtttttcactgtcacta |
16987917 |
T |
|
| Q |
440 |
gcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcat |
536 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
16987918 |
gcatgtcttagaagaaactctacaatctgttctttatctttgtctcttccatatactttcggttctgtgatagtagaaatagtttggcgccattcatcat |
16988017 |
T |
|
| Q |
537 |
ctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcct |
636 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||||| | ||||||||| |
|
|
| T |
16988018 |
ctcctcgttgatgctcctccatgactcccacttgttgaaatccaaacttgatcctttcttcagcaatatcatcaatctttttagcaactttcttcatcct |
16988117 |
T |
|
| Q |
637 |
ctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaat |
736 |
Q |
| |
|
||| |||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
16988118 |
cttcccaatgttgcgatgagccaaaatcttcataggatggaaactag---------tgttgtctccatgtgcttttgaggttattgagcattcatccaat |
16988208 |
T |
|
| Q |
737 |
atatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagtacatcac |
836 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||| |||||||| | ||||| || | |||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
16988209 |
atatcatcaagtacataagcagcatcagacagtttctgcagccattgtttcacaacattgcttgttatttgcttcttttgagcatcttttagtacagcac |
16988308 |
T |
|
| Q |
837 |
ggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcac |
936 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
16988309 |
ggattgtggtgaggttttcatttagtttctgggtcaatttttcaacacccaaaaaggatgcaagctcctctcgaacaaaatatccgaggttttcaatcac |
16988408 |
T |
|
| Q |
937 |
gattccaagtaaagcttcagccatttagtaggtatgagaacagaaatgaa |
986 |
Q |
| |
|
||||||||||||||| ||||||||||| || ||| |||||||||||||| |
|
|
| T |
16988409 |
gattccaagtaaagcgtcagccattta-cagatattagaacagaaatgaa |
16988457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 40 - 986
Target Start/End: Complemental strand, 18873287 - 18872335
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattc |
133 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||| |||||| |||||| ||| |||| |||| |||| |
|
|
| T |
18873287 |
agttcccatgattgatgcaacaatgtcaagtctggttgtgaccaaaactgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattc |
18873188 |
T |
|
| Q |
134 |
catttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagaca |
233 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||| || |||| | |||| ||||||||| |
|
|
| T |
18873187 |
catttctcttggtcttcattccacacatcatcaagaacaagtagataccttttgttttgcaaaatatttttaaccttcttttgcattgattctaaagacg |
18873088 |
T |
|
| Q |
234 |
agagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaa |
333 |
Q |
| |
|
|||||||| | ||||||||| |||| ||||| |||||||| |||| |||||||| ||| ||||| || ||||||||||||||||||||||||| ||| |
|
|
| T |
18873087 |
agagatctggattttttccatcggtggattctatgatggactgcaaaactttcatcatactaaaatcctcagaaacacacacccatattttcaagttaaa |
18872988 |
T |
|
| Q |
334 |
atgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactg |
433 |
Q |
| |
|
||||| | |||||||||||||||| |||||| |||||| ||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
18872987 |
gtgtgtatctaccctttcatcattgaagaccacttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcacta |
18872888 |
T |
|
| Q |
434 |
tcgctagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccatt |
530 |
Q |
| |
|
||| ||||| ||||||||||||| |||| |||||| | || ||||||||||||||||||||||| |||| ||||| |||||||||||||| |
|
|
| T |
18872887 |
tcgacagcatgacttagaagaaactcaacaacttgctctctgtcacgatctcttccatatactttcggttcagtgatgacagaaaaagtttggcgccatt |
18872788 |
T |
|
| Q |
531 |
catcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctcctt |
630 |
Q |
| |
|
|||||||||||||||| | |||||| ||||| || || || ||||||||||| ||||||||||||||||| | |||||| |||||||||||||||| |
|
|
| T |
18872787 |
tatcatctcctcgttggcgatcctccatgactaccgct---tgtaatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctcctt |
18872691 |
T |
|
| Q |
631 |
catcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattca |
730 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||| |||||||||||| ||||| ||||||||| ||||||| |||||||| ||||||| ||| ||| |
|
|
| T |
18872690 |
catcctctttccaatatcccgacgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatca |
18872591 |
T |
|
| Q |
731 |
tccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagta |
830 |
Q |
| |
|
||||||||||||||||| ||||| ||| ||| ||| || |||||||| | ||||| | | |||||| |||||||| ||||||||||| || | |
|
|
| T |
18872590 |
tccaatatatcatcaagaacataggcaacatcagtcagcttctgcagccaatctttcacaacacggcttgttagttgcttctcttcagcatcttggagga |
18872491 |
T |
|
| Q |
831 |
catcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttc |
930 |
Q |
| |
|
|| |||| |||| |||||| ||| || |||||| || ||||||||| ||||||||||||||| | || ||||||||||||||||||||| ||||||| |
|
|
| T |
18872490 |
cagcacgaattgcggtgagatttccacatagcttttgtgtcaattcttcaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggttttg |
18872391 |
T |
|
| Q |
931 |
tatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaaatgaa |
986 |
Q |
| |
|
||||| ||||||||||| | |||||||||| | ||||| ||||||||||||||| |
|
|
| T |
18872390 |
aatcacagttccaagtaaaacatcagccattttgcaggtacgagaacagaaatgaa |
18872335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 40 - 738
Target Start/End: Complemental strand, 18806293 - 18805589
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattc |
133 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||||| ||| |||| |||| |||| |
|
|
| T |
18806293 |
agttcccatgattgatgcaacaatgtcaagtctggttgtgaccaaaattgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattc |
18806194 |
T |
|
| Q |
134 |
catttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagaca |
233 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||| | |||||| | |||| ||||||||| |
|
|
| T |
18806193 |
catttctcttggtcttcattccacacatcatcaagaacaagtagataccttttgttttgcaaaattttttgaacttccttttgcattgattctaaagacg |
18806094 |
T |
|
| Q |
234 |
agagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaa |
333 |
Q |
| |
|
|||||||| | ||||||||| || | ||||| |||||||| |||| |||||||| ||| ||||| || ||||||||||||||||||||||||| ||| |
|
|
| T |
18806093 |
agagatctggactttttccaacggcggattctatgatggactgcaaaactttcatcatactaaaatcctcagaaacacacacccatattttcaagttaaa |
18805994 |
T |
|
| Q |
334 |
atgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactg |
433 |
Q |
| |
|
||||| | |||||||||||||||| | |||| |||||| ||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
18805993 |
gtgtgtatctaccctttcatcattgaataccacttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcacta |
18805894 |
T |
|
| Q |
434 |
tcgctagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccatt |
530 |
Q |
| |
|
||| ||||| ||||||||||||| |||| |||||| | || ||||||||||||||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
18805893 |
tcgacagcatgacttagaagaaactcaacaacttgctctctgtcacgatctcttccatatactttcggttcagtgatgactgaattagtttggcgccatt |
18805794 |
T |
|
| Q |
531 |
catcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctcctt |
630 |
Q |
| |
|
|||||||||||||||| | |||||| ||||| || | ||| ||||||||||| ||||||||||||||||| | |||||| |||||||||||||||| |
|
|
| T |
18805793 |
tatcatctcctcgttggcgatcctccatgact---accgcttgcaatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctcctt |
18805697 |
T |
|
| Q |
631 |
catcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattca |
730 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||| |||||||||||| ||||| ||||||||| ||||||| |||||||| ||||||| ||| ||| |
|
|
| T |
18805696 |
catcctctttccaatatcccgacgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatca |
18805597 |
T |
|
| Q |
731 |
tccaatat |
738 |
Q |
| |
|
|||||||| |
|
|
| T |
18805596 |
tccaatat |
18805589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 40 - 758
Target Start/End: Original strand, 16788031 - 16788747
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttctttccaagttgcaacaaagactttaacttattccatttc |
139 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| || || ||||||||||||||| ||||||||||||||| |
|
|
| T |
16788031 |
agttgccatgatggatgcaacaatgtcaagtcgtgcagtgaccaaaattgatgcacctttcgtttcatattgcaacaaagacttgaacttattccatttc |
16788130 |
T |
|
| Q |
140 |
tcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagacaagagat |
239 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| | ||||||||||||||| ||||| ||||||||| | ||||||| ||||| |||||| |
|
|
| T |
16788131 |
tcttggtcttcattccacacatcatcaagaacaagtagataccttttgttttg-aaaatttcttgaaccttctttcgcattgactccaaagatgagagat |
16788229 |
T |
|
| Q |
240 |
ctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgt |
339 |
Q |
| |
|
|| | ||||||||||| |||| ||||| || || |||||||| ||||||| ||||||||||| |||||| | | ||||||||||| ||||||||| | |
|
|
| T |
16788230 |
ctggattttttccaattgtgtcttctatgacgg-ctctaaaaccttcatcatgctgaaatcatctgaaacaaaaatccatattttcaggtcaaaatggtt |
16788328 |
T |
|
| Q |
340 |
ttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgcta |
439 |
Q |
| |
|
| |||| ||||||| ||||| || | |||||| |||||||||||||| | | | || | ||||||||||||| |||||||||||||||| |||| || |
|
|
| T |
16788329 |
tcttactctttcattgttgtatactaattgagcaagtgttgtttttccatattcacctaggccaacaatggaatagacagagagttcttctttgtcagta |
16788428 |
T |
|
| Q |
440 |
gcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcat |
536 |
Q |
| |
|
| || ||||| |||||| ||||||||||||||||| | ||| |||||||||||| ||||||||||| |||| ||||||||||||| |||||| |
|
|
| T |
16788429 |
gtatgctttagaggaaactttacaatctgctctttatatatgtaccttccatatactacaggttcggtgacgacagaagtagtttggcgccactcatcag |
16788528 |
T |
|
| Q |
537 |
ctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcct |
636 |
Q |
| |
|
| |||||||| |||| || || ||||||||| || |||||| |||| |||| |||| ||||||| | |||||| ||||||||||| |||||||||| |
|
|
| T |
16788529 |
cacctcgttgacgctcttctgttactcccact---tgcaatccatacttcatcctgtctttagcaataacgtcaatctttttagcaaccgccttcatcct |
16788625 |
T |
|
| Q |
637 |
ctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaat |
736 |
Q |
| |
|
|||||||| || || |||||||||||||| ||||| |||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
16788626 |
ctttccaacgtcacgctgagccaaaatcttcttaggaaggaaacgggtgatgcacttgttgtctccatgtgcttttgatgttattgaacattcgtccaat |
16788725 |
T |
|
| Q |
737 |
atatcatcaagtacataagcag |
758 |
Q |
| |
|
| ||||||||| |||| ||||| |
|
|
| T |
16788726 |
aaatcatcaagaacatgagcag |
16788747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 293 - 962
Target Start/End: Original strand, 16781422 - 16782088
Alignment:
| Q |
293 |
ctgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtc |
392 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| |||||||| || |||| |||||||| ||||| |||| |||||| |||||||||||||| | || |
|
|
| T |
16781422 |
ctgaaatcatctgaaacacaaacccatattttcaaatcaaaatgggtggttacgctttcatccttgtataccaattgagcaagtgttgtttttccatatc |
16781521 |
T |
|
| Q |
393 |
cgccaacgccaacaatggaacagacagagagttcttcactgtcgctagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccata |
489 |
Q |
| |
|
| || | ||||||||||||| |||||||||| |||||||| | |||||||| | |||||| |||| ||||| || ||||||||| ||||||||||||| |
|
|
| T |
16781522 |
cacctaggccaacaatggaatagacagagagatcttcactattgctagcatgcctcagaagatactcaacaatttgttctttatctctgtctcttccata |
16781621 |
T |
|
| Q |
490 |
tactttcggttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttc |
589 |
Q |
| |
|
|||||| | ||| |||| ||| ||||||| ||||| || |||||| || ||||||||||| |||| ||||| || ||||| ||||| || |
|
|
| T |
16781622 |
tactttggattcagtgatgacagaggtagtttgccgccactcttcatcttctggttggtgctcca---tgacccccacc---tgcaatccgaacttcatc |
16781715 |
T |
|
| Q |
590 |
ctttcttcagcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgc |
689 |
Q |
| |
|
||||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |
|
|
| T |
16781716 |
ctttcttcagcaatatcatcgatctctttagcaatctccttcatcctctttccaatgttgcgacgagccaaaatcttcataggatggaaacgagtgatcc |
16781815 |
T |
|
| Q |
690 |
acttgttgcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcac |
789 |
Q |
| |
|
||||||| | ||||| |||||| | |||||||||||||| ||||||||||||||||| |||||||||| |||| ||||| || | ||| | |||| |
|
|
| T |
16781816 |
gcttgttgtcgccatgtgcttttaaggttattgaacattcgtccaatatatcatcaagcacataagcagcatcacgcagttgctgtaaccactctttcac |
16781915 |
T |
|
| Q |
790 |
aggatcgtttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaa |
889 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||| | ||| | |||||||||||||||||||||||| |
|
|
| T |
16781916 |
agcatcatttgttatttgcttcttttcagcatcttttaggacagcacggattaaagtgagctttctagatagtctttgggtcaattctccaacacccaaa |
16782015 |
T |
|
| Q |
890 |
aaggatgcaatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
||| |||| ||||||| | ||||||||||| ||||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
16782016 |
taggtagcaagctcctcttgtacaaaagatccgaggttttgaatcacgataccaagtaaagcatcagccattt |
16782088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 482 - 986
Target Start/End: Complemental strand, 18794273 - 18793772
Alignment:
| Q |
482 |
cttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaa |
581 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| | |||||| ||||| || || || ||||||| |
|
|
| T |
18794273 |
cttccatatactttcggttcagtgacgactgaagtagtttggcgccattcatcatctcctcgttggcgatcctccatgactaccgct---tgcaatccaa |
18794177 |
T |
|
| Q |
582 |
actttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaact |
681 |
Q |
| |
|
|||| ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||| ||||||| |||| |
|
|
| T |
18794176 |
acttgatcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttccaatattcctacgagccaaaatcttcttaggatgtaaacg |
18794077 |
T |
|
| Q |
682 |
agtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccag |
781 |
Q |
| |
|
||||| ||||||||| ||||||| |||||||| ||||||| ||| |||||||||||||||||||| ||||| ||| ||| || || |||||||| |
|
|
| T |
18794076 |
ggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatcatccaatatatcatcaagaacataggcaacatcagttagcttctgcagccaa |
18793977 |
T |
|
| Q |
782 |
ttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaa |
881 |
Q |
| |
|
| ||||| | | ||||||||||||||| ||| ||||||| || ||| |||| |||| |||||| ||| || || ||| || ||||||||||||| |
|
|
| T |
18793976 |
tctttcacaacacggcttgttatttgcttctcttcggcatcttgaaggacagcacgaattgcggtgagatttccacataacttttgtgtcaattctccaa |
18793877 |
T |
|
| Q |
882 |
cacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaa |
981 |
Q |
| |
|
|||||||||||| | || ||||||||||||||||||||| ||| ||| ||||| ||||||||||| | |||| ||||| | ||||| | |||||||| |
|
|
| T |
18793876 |
cacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggatttgaatcacagttccaagtaaaacatcagtcattttgcaggtaagtgaacagaa |
18793777 |
T |
|
| Q |
982 |
atgaa |
986 |
Q |
| |
|
||||| |
|
|
| T |
18793776 |
atgaa |
18793772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 374 - 962
Target Start/End: Complemental strand, 18870470 - 18869882
Alignment:
| Q |
374 |
agtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgctagcat---ttagaagaaactctacaatctgctctt |
470 |
Q |
| |
|
||||||||||||||||| || ||||| |||||||||||| ||| |||||||||||||||||| ||||| |||| |||||||| | || | |||| |
|
|
| T |
18870470 |
agtgttgtttttccttgcccaccaacaccaacaatggaatagaaagagagttcttcactgtcaagagcatgacttagcagaaactcaaaaactttctctc |
18870371 |
T |
|
| Q |
471 |
tatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactga |
570 |
Q |
| |
|
|||| ||||||||||| ||||| ||||| ||||| |||| |||||||||| ||||||| ||||||||||| | |||||| ||||| ||||| |
|
|
| T |
18870370 |
tatcacgatctcttccataaacttttggttcagtgacgacagaagtagtttggcgattttcatcaactcctcgttggcgatcctccatgactaccact-- |
18870273 |
T |
|
| Q |
571 |
ttgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgta |
670 |
Q |
| |
|
|| ||||| || || ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| | | ||||||||||||| || || |
|
|
| T |
18870272 |
-tgtaatcctaatttgatcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttccaatatccctacgagccaaaatcatctta |
18870174 |
T |
|
| Q |
671 |
ggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtt |
770 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||| |||||||| |||||| ||| |||||||||||||||||||| ||||||||| ||| ||| | |
|
|
| T |
18870173 |
ggatggaaactggtgatccacttgttgtctccatgtgcttttgattttattgtacaatcatccaatatatcatcaagaacataagcaacatcagtcagct |
18870074 |
T |
|
| Q |
771 |
tttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggt |
870 |
Q |
| |
|
| |||||||| | ||||| | | | ||||||||||||| ||||||||||| || ||| | | |||| |||||| ||| || |||||| || || |
|
|
| T |
18870073 |
tctgcagccaatctttcacaacacggctcgttatttgcttctcttcagcatcttggaggacagcctgaattgcggtgagatttccacatagcttttgtgt |
18869974 |
T |
|
| Q |
871 |
caattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
||||||| ||||||||||||||| | || ||||||||||||||| || || ||||||| ||||| ||||||||||| | |||||||||| |
|
|
| T |
18869973 |
caattcttcaacacccaaaaaggtcgaaagctcctctcgaacaaacgacccgaggttttgaatcacagttccaagtaaaacatcagccattt |
18869882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 588 - 986
Target Start/End: Complemental strand, 18587251 - 18586853
Alignment:
| Q |
588 |
tcctttcttcagcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgat |
687 |
Q |
| |
|
||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| | | ||||||||||||| || |||||||||||| ||||| |
|
|
| T |
18587251 |
tcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttccaatatccctacgagccaaaatcatcttaggatggaaacgggtgat |
18587152 |
T |
|
| Q |
688 |
gcacttgttgcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctc |
787 |
Q |
| |
|
||||||||| ||||||| |||||||| |||||| ||| |||||||||||||| ||||| ||||||||| ||| ||| || |||||||| | || |
|
|
| T |
18587151 |
ccacttgttgtctccatgtgcttttgattttattgtacaatcatccaatatatcgtcaagaacataagcaacatcagtcagcttctgcagccaatctttc |
18587052 |
T |
|
| Q |
788 |
acaggatcgtttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacaccca |
887 |
Q |
| |
|
||| | | ||||||||||||||| ||||||||||| || ||| |||| |||| |||||| ||| || || ||| || ||||||||||||||||||| |
|
|
| T |
18587051 |
acaacacggcttgttatttgcttctcttcagcatcttggaggacagcacgaattgcggtgagatttccacataacttttgtgtcaattctccaacaccca |
18586952 |
T |
|
| Q |
888 |
aaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaaatgaa |
986 |
Q |
| |
|
|||||| | || ||||||||||||||||||||| ||| ||| ||||| ||||||||||| | |||| ||||| | ||||| | ||||||||||||| |
|
|
| T |
18586951 |
aaaaggtcgaaagctcctctcgaacaaaagatccgaggatttgaatcacagttccaagtaaaacatcagtcattttgcaggtaagtgaacagaaatgaa |
18586853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 826 - 962
Target Start/End: Original strand, 16839332 - 16839468
Alignment:
| Q |
826 |
tagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaagg |
925 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
16839332 |
tagtacagcacggattgtggtgaggttttcattttgcttatgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccgagg |
16839431 |
T |
|
| Q |
926 |
ttttctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
16839432 |
ttttcaatcacgattccaattaaagcgtcagccattt |
16839468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 74 - 461
Target Start/End: Original strand, 16843925 - 16844321
Alignment:
| Q |
74 |
gtagtgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaa |
167 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| |||||| |||||| | ||||||| |||||| | |||||||||| |||||||||| |||| |
|
|
| T |
16843925 |
gtagtgaccaaaactgatgcaccttttgttccatttccacattgcaaaaaagacatgaacttatcccatttatgttggtcttcattccaaacatcgtcaa |
16844024 |
T |
|
| Q |
168 |
gaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagacaagagatctaggttttttccaatggtgttttctag |
267 |
Q |
| |
|
| ||||| |||||||||||||||||||||||| ||||||| | ||| | ||||| | |||| | | | ||||| ||| || ||||| |
|
|
| T |
16844025 |
ggacaagtaaataccttttgttttgcaaaatagtttgaaccttttcttgcattgcttgtaaagtcgagaggtttggatttttcccatctttggattctac |
16844124 |
T |
|
| Q |
268 |
gatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatt |
367 |
Q |
| |
|
||| |||| ||||| ||||||| ||| |||||||| |||||||| |||||||||||||| |||||| || |||||||| ||||||||| |||||| | |
|
|
| T |
16844125 |
gatcgactgcaaaatcttcatcatactaaaatcatcagaaacacaaacccatattttcaaaggaaaatgagtatttaccctctcatcattgaagaccagt |
16844224 |
T |
|
| Q |
368 |
tgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgctagcat---ttagaagaaactctacaa |
461 |
Q |
| |
|
||||| |||| ||| ||||| | ||| ||| |||||||||||| ||||||||||| |||| |||| |||||| ||||||||||||| |||| |
|
|
| T |
16844225 |
tgagcaagtgctgtctttccatatccaccatgaccaacaatggaatagacagagagtccttccttgtcaatagcatgccttagaagaaactcaacaa |
16844321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 866 - 962
Target Start/End: Original strand, 16790261 - 16790357
Alignment:
| Q |
866 |
tgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| || ||| ||| ||||||| | |||||||||| |
|
|
| T |
16790261 |
tgggtcaattccccaacacccaaaaaggatgcaagctcctcttgaacaaaagatccgaggttttgaattacggttctaagtaaaacatcagccattt |
16790357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 646
Target Start/End: Original strand, 16844423 - 16844500
Alignment:
| Q |
569 |
gattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcctctttccaatg |
646 |
Q |
| |
|
||||| ||||||||||| | ||||||||||||||| | |||||| ||| ||| ||||| |||||| ||||||||||| |
|
|
| T |
16844423 |
gattgtaatccaaacttgattctttcttcagcaatagcatcaatcttttcagctacctctttcatcttctttccaatg |
16844500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 16781163 - 16781223
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| || ||||| ||||| |||| ||||||| |
|
|
| T |
16781163 |
agttcccatgatggatgcaacaatatcaagtcgtgttgtgactaaaatagatgaacctttc |
16781223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 698; Significance: 0; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 698; E-Value: 0
Query Start/End: Original strand, 1 - 962
Target Start/End: Original strand, 37512 - 38473
Alignment:
| Q |
1 |
gatgtcatcatcaaataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
37512 |
gatgtcatcatcagataactgtgctaaaggatgaaccttagttcccatgatggatgcaacaatctgaagtctggtagtgaccaatattgatgcacctttc |
37611 |
T |
|
| Q |
101 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37612 |
tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatat |
37711 |
T |
|
| Q |
201 |
cttgaaccnnnnnnnnccttgactctaaagacaagagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatc |
300 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
37712 |
cttgaaccttttttttccttgactctaaagacaagagatctaggttttttccaatggtgttttctatgatggactctaaaattttcatcaaactgaaatc |
37811 |
T |
|
| Q |
301 |
atccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacg |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37812 |
atccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaaca |
37911 |
T |
|
| Q |
401 |
ccaacaatggaacagacagagagttcttcactgtcgctagcatttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggtt |
500 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37912 |
ccaacaatggaacagacaaagagttcttcactttcgctggcatttagaagaaactctacaatctgttctttatctttgtctcttccatatactttcggtt |
38011 |
T |
|
| Q |
501 |
cggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagc |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
38012 |
cggtgacagtagaaatagtttggcgccattcatcatctcctcgttgatgctcctccgtgactcccactcgttgaaatccaaatttgttcctttcttcagc |
38111 |
T |
|
| Q |
601 |
aatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcct |
700 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | || |
|
|
| T |
38112 |
aatatcatcaatccttttagcaacctccttcatcctctttccaatgttgcgacaagccaaaatcttcacaggatggaaactagtgatgcacttgtcgtct |
38211 |
T |
|
| Q |
701 |
ccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttg |
800 |
Q |
| |
|
|| || | |||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||| | |||| | |||||||| |
|
|
| T |
38212 |
ccgtgtggttttaaggttattgaacattcatccaatatatcatcaagtacataagcagaatcaccgagttgctgtagccactctttcacggcatcgtttg |
38311 |
T |
|
| Q |
801 |
ttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaat |
900 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||| |||||||| |||| ||| || ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38312 |
ttatttgctttttttcagcatcttttaggacagcacggattaatctgagttttccacgcagcttctcggtcaattctccaacacccaaaaaggatgcaag |
38411 |
T |
|
| Q |
901 |
ctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
||| |||||||||||| ||| || ||||| ||||||||| |||||||||| || ||||||| |
|
|
| T |
38412 |
ctcatctcgaacaaaatgtccgagattttcaatcacgattgcaagtaaagcgtcggccattt |
38473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 480; Significance: 0; HSPs: 2)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 40 - 962
Target Start/End: Original strand, 12913 - 13838
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttctttccaagttgcaacaaagactttaacttattccatttc |
139 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
12913 |
agttcccatgatggatgcaacaatgtcaagtctggtagtgaccaaaattgatgcacctttctttccatgttgcaacgaagacttgaacttattccatttc |
13012 |
T |
|
| Q |
140 |
tcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagacaagagat |
239 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||| |||||| |
|
|
| T |
13013 |
tcttggtcttcactccacacatcatcaagaacaagcaaataccttttgttttgcaaaatttcttgaaccttttttcgcattgactctaaagaggagagat |
13112 |
T |
|
| Q |
240 |
ctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgt |
339 |
Q |
| |
|
| | |||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
13113 |
ttggattttttccaatggtgtcttctatgatggactctaaaaccttcatcatactgaaatcatcagaaacacacacccatattttcaagtcaaaatgtgt |
13212 |
T |
|
| Q |
340 |
ttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgcta |
439 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| |||||||||||||| | ||| || ||||||||||||| ||||||||||||||||||| || || |
|
|
| T |
13213 |
ctttacactttcatcattgaagaccatttgagcaagtgttgtttttccatatccaccgtggccaacaatggaatagacagagagttcttcactctcactg |
13312 |
T |
|
| Q |
440 |
gcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcat |
536 |
Q |
| |
|
|| | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
13313 |
gcgtgccttagcagaaactctacaatctgttctttatctttgtctcttccatatactttcggttcggtgacagcagaagtagtttggcgccattcatcat |
13412 |
T |
|
| Q |
537 |
ctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcct |
636 |
Q |
| |
|
||| ||||||| |||||||||||||| | | | ||| ||||| ||||| ||||||||||||||||||| || ||| |||||||||||||||||||||| |
|
|
| T |
13413 |
ctcgtcgttggcgctcctccgtgactgcaaattgttgtaatccgaacttcatcctttcttcagcaatatcatcgatctttttagcaacctccttcatcct |
13512 |
T |
|
| Q |
637 |
ctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaat |
736 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||| | ||||| ||| || | ||||||||||||||||||||| |
|
|
| T |
13513 |
ctttccaatgttgcgacgagccaaaatcttcataggatggaaacgagtgatccgcttgttgtcgccatgtgctcttaaggttattgaacattcatccaat |
13612 |
T |
|
| Q |
737 |
atatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagtacatcac |
836 |
Q |
| |
|
|||||||||| |||||||||| ||| ||||| || ||||| | | |||| |||||||||||||||||||||||| ||||||||||| ||| ||| |
|
|
| T |
13613 |
atatcatcaatcacataagcagcatcaatcagttgctgtagccactctttgacagcatcgtttgttatttgcttcttttctgcatcttttaggacagcac |
13712 |
T |
|
| Q |
837 |
ggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcac |
936 |
Q |
| |
|
||||| ||||| ||| | ||| | |||||||||||||||||||||||| ||| |||| ||||||| | ||||| ||||| ||||||| |||| |
|
|
| T |
13713 |
ggattaaagtgagctttctagataggctttgggtcaattctccaacacccaaataggtagcaaactcctcttgtacaaatgatccgaggttttgaatcaa |
13812 |
T |
|
| Q |
937 |
gattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
||||||||||||||| |||||||||| |
|
|
| T |
13813 |
gattccaagtaaagcatcagccattt |
13838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 40 - 962
Target Start/End: Original strand, 8571 - 9490
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttctttccaagttgcaacaaagactttaacttattccatttc |
139 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
8571 |
agttcccatgatggatgcaacaatgtcaagtctggtagtgatcaaaattgatgcacctttctttccatttagcaacaaagactttaacttattccatttc |
8670 |
T |
|
| Q |
140 |
tcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagacaagagat |
239 |
Q |
| |
|
|||| ||||||| |||| ||||||||||||||||| |||||||| || ||||||||||| ||||||||| | |||||||||||||| |||||| |
|
|
| T |
8671 |
tctttgtcttcagtccacacatcatcaagaacaagtaaatacctatttttttgcaaaatttcttgaaccttttgttgcattgactctaaagacgagagat |
8770 |
T |
|
| Q |
240 |
ctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgt |
339 |
Q |
| |
|
| | |||||||||||||||||||||| |||||||||||||| ||||||| | ||| |||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8771 |
gtggattttttccaatggtgttttctatgatggactctaaaactttcatcgcattgatatcaccagaaacacacacccatattttcaagtcaaaatgtgt |
8870 |
T |
|
| Q |
340 |
ttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgcta |
439 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| |||||||||||||| | ||| || ||||||||| ||| |||||||||||||||||||||| | | |
|
|
| T |
8871 |
ctttaccctttcatcattgaagactgtttgagcaagtgttgtttttccatatccaccgtggccaacaatagaatagacagagagttcttcactgtcacca |
8970 |
T |
|
| Q |
440 |
gcatt---tagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcat |
536 |
Q |
| |
|
|| | |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| |||| ||| ||||||| |||| | |||| |
|
|
| T |
8971 |
gcgtgccgtagaagaaactctacaatatgctctttatctttgtctcttccatatactttggattcagtgatgacagaggtagtttgccgccgcccttcat |
9070 |
T |
|
| Q |
537 |
ctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcct |
636 |
Q |
| |
|
|| || ||||| |||| |||| ||||| || ||||| ||||| ||||||||||||||||||| || ||| |||||||| |||||||||||| |
|
|
| T |
9071 |
cttctggttggcgctcga---tgacccccaca---tgtaatccgaacttcatcctttcttcagcaatatcgtcgatctctttagcaatctccttcatcct |
9164 |
T |
|
| Q |
637 |
ctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaat |
736 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||| |||||| | ||||||| ||||| |||||| | ||||||||||||||||||||| |
|
|
| T |
9165 |
ctttccaatgttgcgacgaaccaaaatcttcataggatggaaacgagtgatccgcttgttgttaccatgtgcttttaaggttattgaacattcatccaat |
9264 |
T |
|
| Q |
737 |
atatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagtacatcac |
836 |
Q |
| |
|
||||||||||| |||||||||| |||| ||||| || ||||| | | |||| |||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
9265 |
atatcatcaagcacataagcagcatcacgcagttgctgtagccactctttgacagcatcgtttgttatttgcttcttttcagcatcttttaggacagcac |
9364 |
T |
|
| Q |
837 |
ggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcac |
936 |
Q |
| |
|
||||| ||||| ||| | ||| | |||||||||||||||||||||||| ||| |||| ||||||| | ||||| ||||| ||||||| |||| |
|
|
| T |
9365 |
ggattaaagtgagctttctagataggctttgggtcaattctccaacacccaaataggtagcaagctcctcttgtacaaatgatccgaggttttgaatcaa |
9464 |
T |
|
| Q |
937 |
gattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
||||||||||||||| |||||||||| |
|
|
| T |
9465 |
gattccaagtaaagcatcagccattt |
9490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 40 - 986
Target Start/End: Original strand, 4737 - 5689
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattc |
133 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||| |||||| |||||| ||| |||| |||| |||| |
|
|
| T |
4737 |
agttcccatgattgatgcaacaatgtcaagtctggttgtgaccaaaactgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattc |
4836 |
T |
|
| Q |
134 |
catttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagaca |
233 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||| | ||| ||||||||||||||||||| || |||| | |||| ||||||||| |
|
|
| T |
4837 |
catttctcttggtcttcattccacacatcatcaagaacaagtagatatcttttgttttgcaaaatatttttaaccttcttttgcattgattctaaagacg |
4936 |
T |
|
| Q |
234 |
agagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaa |
333 |
Q |
| |
|
|||||||| | ||||||||| |||| ||||| |||||||| |||| |||||||| | | ||||| || ||||||||||||||||||||||||| ||| |
|
|
| T |
4937 |
agagatctggattttttccatcggtggattctatgatggactgcaaaactttcatcatattaaaatcctcagaaacacacacccatattttcaagttaaa |
5036 |
T |
|
| Q |
334 |
atgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactg |
433 |
Q |
| |
|
||||| | ||||||||| |||||| | |||| |||||| ||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
5037 |
gtgtgtatctaccctttcctcattgaacaccacttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcacta |
5136 |
T |
|
| Q |
434 |
tcgctagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccatt |
530 |
Q |
| |
|
||| ||||| ||||||||||||| |||| |||||| | || ||||||||||||||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
5137 |
tcgacagcatgacttagaagaaactcaacaacttgctctctgtcacgatctcttccatatactttcggttcagtgacgacagaaaaagtttggcgccatt |
5236 |
T |
|
| Q |
531 |
catcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctcctt |
630 |
Q |
| |
|
|||||||||||||||| | || ||| ||||| || || || ||||||||||| ||||||||||||||||| | |||||| |||||||||||||||| |
|
|
| T |
5237 |
tatcatctcctcgttggcgatcttccatgactaccgct---tgtaatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctcctt |
5333 |
T |
|
| Q |
631 |
catcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattca |
730 |
Q |
| |
|
||||||||||||||| | | ||||||||||||| || |||||||||||| ||||| ||||||||| ||||||| |||||||| |||||| ||| ||| |
|
|
| T |
5334 |
catcctctttccaatatccctacgagccaaaatcatcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgattttattgtacaatca |
5433 |
T |
|
| Q |
731 |
tccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagta |
830 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||| ||| || |||||||| | ||||| | | ||||||||||||||| ||||||||||| || | |
|
|
| T |
5434 |
tccaatatatcgtcaagaacataagcaacatcagtcagcttctgcagccaatctttcacaacacggcttgttatttgcttctcttcagcatcttggagga |
5533 |
T |
|
| Q |
831 |
catcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttc |
930 |
Q |
| |
|
|| |||| |||| |||||| ||| || || ||| || ||||||||||||||||||||||||| | || ||||||||||||||||||||| ||| ||| |
|
|
| T |
5534 |
cagcacgaattgcggtgagatttccacataacttttgtgtcaattctccaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggatttg |
5633 |
T |
|
| Q |
931 |
tatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaaatgaa |
986 |
Q |
| |
|
||||| ||||||||||| | |||| ||||| | ||||| | ||||||||||||| |
|
|
| T |
5634 |
aatcacagttccaagtaaaacatcagtcattttgcaggtaagtgaacagaaatgaa |
5689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 40 - 986
Target Start/End: Original strand, 9417 - 10369
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattc |
133 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||| |||||| |||||| ||| |||| |||| |||| |
|
|
| T |
9417 |
agttcccatgattgatgcaacaatgtcaagtctggttgtgaccaaaactgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattc |
9516 |
T |
|
| Q |
134 |
catttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagaca |
233 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||| | ||| ||||| ||||||||||||| || |||| | |||| ||||||||| |
|
|
| T |
9517 |
catttctcttggtcttcaatccacacatcatcaagaacaagtagatatcttttattttgcaaaatatttttaaccttcttttgcattgattctaaagacg |
9616 |
T |
|
| Q |
234 |
agagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaa |
333 |
Q |
| |
|
|||||||| | ||||||||| |||| ||||| |||||||| |||| |||||||| | | ||||| || ||||||||||||||||||||||||| ||| |
|
|
| T |
9617 |
agagatctggattttttccatcggtggattctatgatggactgcaaaactttcatcatattaaaatcctcagaaacacacacccatattttcaagttaaa |
9716 |
T |
|
| Q |
334 |
atgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactg |
433 |
Q |
| |
|
||||| | |||||||||||||||| | |||| |||||| ||||||||||||||||| || ||||| |||||||||||| |||| |||||||||||||| |
|
|
| T |
9717 |
gtgtgtatctaccctttcatcattgaacaccacttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacngagagttcttcacta |
9816 |
T |
|
| Q |
434 |
tcgctagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccatt |
530 |
Q |
| |
|
|| | ||| ||||||||||||| |||| |||||| | || |||||||||||||||||||||||| ||||| ||| ||||||||||||||| |
|
|
| T |
9817 |
tccacaacatgacttagaagaaactcaacaacttgctctctgtcacggtctcttccatatactttcggttcagtgacgactgaagtagtttggcgccatt |
9916 |
T |
|
| Q |
531 |
catcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctcctt |
630 |
Q |
| |
|
||||||||||||||||| | |||||| ||||| || || || ||||||||||| ||||||||||||||||| | |||||| |||||||||||||||| |
|
|
| T |
9917 |
catcatctcctcgttggcgatcctccatgactaccgct---tgcaatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctcctt |
10013 |
T |
|
| Q |
631 |
catcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattca |
730 |
Q |
| |
|
||||||||||||||| | | |||||||||||||||| ||||||| |||| ||||| ||||||||| ||||||| |||||||| ||||||| ||| ||| |
|
|
| T |
10014 |
catcctctttccaatatgccaacgagccaaaatcttcttaggatgaaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatca |
10113 |
T |
|
| Q |
731 |
tccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagta |
830 |
Q |
| |
|
||||||||||||||||| ||||| ||| ||| || || |||||||| | ||||| | | ||||||||||||||| ||| ||||||| || | |
|
|
| T |
10114 |
tccaatatatcatcaagaacataggcaacatcagttagcttctgcagccaatctttcacaacacggcttgttatttgcttctcttcggcatcttgaagga |
10213 |
T |
|
| Q |
831 |
catcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttc |
930 |
Q |
| |
|
|| |||| |||| |||||| ||| || || ||| || ||||||||||||||||||||||||| | || ||||||||||||||||||||| ||| ||| |
|
|
| T |
10214 |
cagcacgaattgcggtgagatttccacataacttttgtgtcaattctccaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggatttg |
10313 |
T |
|
| Q |
931 |
tatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaaatgaa |
986 |
Q |
| |
|
||||| ||||||||||| | |||| ||||| | ||||| | ||||||||||||| |
|
|
| T |
10314 |
aatcacagttccaagtaaaacatcagtcattttgcaggtaagtgaacagaaatgaa |
10369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 40 - 962
Target Start/End: Complemental strand, 7053363 - 7052435
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttctttccaagt------tgcaacaaagactttaacttattc |
133 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||| |||||||| |||||||||| ||||||| || || | ||||||||| |||| ||||| | | |
|
|
| T |
7053363 |
agttcccatgatagatgcaacaatttcaagtcttgtagtgactaaaattgatgaacctttccttgtaattgcagactgcaacaaaaacttgaacttgtac |
7053264 |
T |
|
| Q |
134 |
catttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagaca |
233 |
Q |
| |
|
||||| | ||||||||| ||||||||||||| | ||||| |||||||||||| ||||||||| ||||||||| | | || |||| ||| |
|
|
| T |
7053263 |
catttaccatggtcttcattccaaacatcatctaatacaagtaaataccttttgctttgcaaaacttcttgaacctttttttgcatggattctagagaag |
7053164 |
T |
|
| Q |
234 |
agagatctaggttttt-tccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaa |
332 |
Q |
| |
|
|||||| |||| |||| ||| ||| ||||| |||||| | || ||||| |||| ||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
7053163 |
agagat-taggattttgtcctgtggcagattctatgatggagtgtaggattttaatcatgctgaaatcatctgaaacacaaacccatattttcaagtcaa |
7053065 |
T |
|
| Q |
333 |
aatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcact |
432 |
Q |
| |
|
|||| || |||| |||||||| || ||||||| |||||| |||||||||||||| | ||| | ||||||||||| | ||| ||||||||||||||| |
|
|
| T |
7053064 |
aatgggtgcttacactttcatcgttatagaccaattgagcaagtgttgtttttccatatccactgtggccaacaatgggatagatagagagttcttcact |
7052965 |
T |
|
| Q |
433 |
gtcgctagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccat |
529 |
Q |
| |
|
||| ||||||| | ||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||| |
|
|
| T |
7052964 |
gtcactagcatgcctcagaagaaactcgacaatcttctctttatctttgtctcttccatataccacaacttcagtgatgacagaagtagtttggcgccat |
7052865 |
T |
|
| Q |
530 |
tcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctcct |
629 |
Q |
| |
|
|||||||||||||| || ||||||| ||||||||||| || ||||||||||| ||||||||||||||||| | |||||| ||||||||||||| | |
|
|
| T |
7052864 |
tcatcatctcctcgctgacgctcctctatgactcccact---tgtaatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctctt |
7052768 |
T |
|
| Q |
630 |
tcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattc |
729 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||| |||||||||||| ||||| ||||||||| ||||| | |||||| |||||||||||||| |
|
|
| T |
7052767 |
tcatcctctttccaatgtcacgccgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccacagggttttgatgttattgaacattc |
7052668 |
T |
|
| Q |
730 |
atccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagt |
829 |
Q |
| |
|
||||||||||||||||| |||| ||||| ||| |||| || |||||||| | | |||| || | |||| ||||||||| |||||| ||||| ||| |
|
|
| T |
7052667 |
gtccaatatatcatcaagaacatgagcagcatcagccagcttctgcagccaatcttttacagcatggcttgtaatttgcttcacttcagcgtctttgagt |
7052568 |
T |
|
| Q |
830 |
acatcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggtttt |
929 |
Q |
| |
|
| | |||| |||| ||||| ||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
7052567 |
atagcacgaattgcagtgagatttccacatagcttctgggtcaattctcctacacccaaaaaggatgcaagctcctctcgaaaaaaagatccgaggtttt |
7052468 |
T |
|
| Q |
930 |
ctatcacgattccaagtaaagcttcagccattt |
962 |
Q |
| |
|
| |||||| ||||||||||| | |||||||||| |
|
|
| T |
7052467 |
caatcacggttccaagtaaaacatcagccattt |
7052435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 40 - 981
Target Start/End: Complemental strand, 38939456 - 38938512
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattc |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||| ||||| ||||| |||||| |||||| | ||| ||| ||| ||||| | | |
|
|
| T |
38939456 |
agttcccatgatggatgcaacaatctcaagtcgtgttgtgactaaaatagatgcccctttcgttgtatttccactcttcaaaaaatgcttcaacttttcc |
38939357 |
T |
|
| Q |
134 |
catttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaaccnnnnnnnnccttgactctaaagaca |
233 |
Q |
| |
|
||||| |||| |||| |||| |||||||| || ||||| |||||||||||| ||||||||| |||||||| | |||| || |||| || |
|
|
| T |
38939356 |
cattttacttgttcttggttccacacatcatccagtacaagtaaataccttttgctttgcaaaacttcttgaacttttttttgcattgattccaaagtca |
38939257 |
T |
|
| Q |
234 |
agagatctaggttttttccaatggtgttttctaggatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaa |
333 |
Q |
| |
|
||| || | |||| |||| ||| ||||| |||||| | || |||||||||| ||||||||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
38939256 |
agaaattatgattttgtccagtggcagattctatgatggagtgtaggattttcatcatgctgaaatcatctgaaacacaaacccatattttcaaatcaaa |
38939157 |
T |
|
| Q |
334 |
atgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactg |
433 |
Q |
| |
|
||| || |||| ||||||| |||||||||| |||||| |||||||||||||| | ||| || | |||||||||||| |||||||||| ||||||||| |
|
|
| T |
38939156 |
atgggtggttacgctttcattgttgtagaccaattgagcaagtgttgtttttccatatccacctagaccaacaatggaatagacagagagatcttcactg |
38939057 |
T |
|
| Q |
434 |
tcgctagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccatt |
530 |
Q |
| |
|
| | |||||| | |||||| |||| ||||| || |||||||||||||||||||||||||||| | ||| |||| ||| |||||| ||||| | |
|
|
| T |
38939056 |
ttgttagcatgcctcagaagatactcaacaatttgttctttatctttgtctcttccatatacttcggattcagtgatgacagaggtagttttccgccact |
38938957 |
T |
|
| Q |
531 |
catcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctcctt |
630 |
Q |
| |
|
| |||||| || ||||| | |||| |||| ||||| ||| ||||| ||||| ||||||||||||||||||| || ||| |||||||||||||||| |
|
|
| T |
38938956 |
cttcatcttctggttggcg---ctccatgacccccac---ttgtaatccgaacttcatcctttcttcagcaatatcatcgatctttttagcaacctcctt |
38938863 |
T |
|
| Q |
631 |
catcctctttccaatgttgcgacgagccaaaatcttcgtaggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattca |
730 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | ||||| |||||| | ||||||||||||||| |
|
|
| T |
38938862 |
catcctctttccaatgttgcgacgagccaaaatcttcagaggatggaaacgagtgatccacttgttgtcgccatgtgcttttaaggttattgaacattca |
38938763 |
T |
|
| Q |
731 |
tccaatatatcatcaagtacataagcagtgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagta |
830 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||| |||||||||| ||||| || | |||| |||||||||| |||||||||||| || | |
|
|
| T |
38938762 |
tccaatatatcatcaagtacataagcaacatcacgcaatttctgcagccagtctttcacaacatggcttgtaatttgcttctcttcagcatctttgagga |
38938663 |
T |
|
| Q |
831 |
catcacggattgtggtgaggttttcatttagcttctgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttc |
930 |
Q |
| |
|
|| |||| |||| ||||| ||| || ||||||||||||||| ||||||||||||||| ||| ||||| |||||||| |||||| | ||| ||| |||| |
|
|
| T |
38938662 |
cagcacgaattgcagtgagatttccacgtagcttctgggtcaactctccaacacccaaataggttgcaagctcctctccaacaaatgttccgagggtttc |
38938563 |
T |
|
| Q |
931 |
tatcacgattccaagtaaagcttcagccatttagtaggtatgagaacagaa |
981 |
Q |
| |
|
|||| |||| |||||||||| |||||||||| | |||||||||||||||| |
|
|
| T |
38938562 |
aatcaggatttcaagtaaagcgtcagccattttgcaggtatgagaacagaa |
38938512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 235; Significance: 1e-129; HSPs: 2)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 281 - 986
Target Start/End: Original strand, 9455 - 10156
Alignment:
| Q |
281 |
attttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttg |
380 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| |||||||||||||| |||||||| || |||| ||||| || ||||| |||| |||||| ||||||| |
|
|
| T |
9455 |
attttcatcatgctgaaatcatctgaaacacaaacccatattttcaaatcaaaatgggtggttacgctttcttcgttgtaaaccaattgagcaagtgttg |
9554 |
T |
|
| Q |
381 |
tttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgctagcat---ttagaagaaactctacaatctgctctttatcttt |
477 |
Q |
| |
|
||||||| | ||| || | ||||||||||||| |||||||||| |||||||||| |||||||| | |||||| |||| ||||| | ||||||||||| |
|
|
| T |
9555 |
tttttccatatccacctaggccaacaatggaatagacagagagatcttcactgttgctagcatgcctcagaagatactcaacaattttttctttatcttt |
9654 |
T |
|
| Q |
478 |
gtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaat |
577 |
Q |
| |
|
|||||||||| ||||| | | ||| |||| || ||||||| ||||| || |||||| || ||||||||||| |||| ||||| || ||| |
|
|
| T |
9655 |
gtctcttccaaatactatggattcagtgatgaaggaggtagtttgccgccactcttcatcttctggttggtgctcca---tgacccccacc---tgtaat |
9748 |
T |
|
| Q |
578 |
ccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatgga |
677 |
Q |
| |
|
|| ||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9749 |
ccgaacttcatcctttcttcagcaatatcatcaatctctttagcaatctccttcatcctctttccaatgttgcgacgagccaaaatcttcataggatgga |
9848 |
T |
|
| Q |
678 |
aactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagtttttgcag |
777 |
Q |
| |
|
||| |||||| | ||||||| | ||||| |||||| | |||||||||||||||||||||||||||||||| |||||||||| |||| ||||| || || |
|
|
| T |
9849 |
aacgagtgatccgcttgttgtcgccatgtgcttttaaggttattgaacattcatccaatatatcatcaagcacataagcagcatcacgcagttgctgtag |
9948 |
T |
|
| Q |
778 |
ccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaattct |
877 |
Q |
| |
|
||| | | |||| |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||| | ||| | |||||||||||| |
|
|
| T |
9949 |
ccactctttgacagcatcgtttgttatttgcttcttttcagcatcttttaggacagcacggattaaagtgagctttctagataggctttgggtcaattct |
10048 |
T |
|
| Q |
878 |
ccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccatttagtaggtatgagaac |
977 |
Q |
| |
|
|||||||||||| ||| |||| ||||||| | ||||| ||||| ||||||| |||| ||||||||||||||| |||||||||| || ||||||||| |
|
|
| T |
10049 |
ccaacacccaaataggtagcaaactcctcttgtacaaatgatccgaggttttgaatcaagattccaagtaaagcatcagccattt-tcagatatgagaac |
10147 |
T |
|
| Q |
978 |
agaaatgaa |
986 |
Q |
| |
|
||||||||| |
|
|
| T |
10148 |
agaaatgaa |
10156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 9208 - 9268
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| || ||||| ||||| |||||||||||| |
|
|
| T |
9208 |
agttcccatgatggatgcaacaatatcaagtcgtgttgtgactaaaatagatgcacctttc |
9268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 153; Significance: 1e-80; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 281 - 986
Target Start/End: Original strand, 13378402 - 13379107
Alignment:
| Q |
281 |
attttcatcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttg |
380 |
Q |
| |
|
|||||| ||| |||||||||||| |||||||| |||||||||||||||||||| || || |||| ||||||| ||||| |||| |||||| ||||||| |
|
|
| T |
13378402 |
attttcttcatactgaaatcatcagaaacacaaacccatattttcaagtcaaagtgggtgcttacgttttcatcgttgtacaccaattgagcaagtgttg |
13378501 |
T |
|
| Q |
381 |
tttttccttgtccgccaacgccaacaatggaacagacagagagttcttcactgtcgctagcat---ttagaagaaactctacaatctgctctttatcttt |
477 |
Q |
| |
|
||||||| | ||| || | ||||||||||||| ||||||||| ||||| |||| || |||| |||||||| |||| ||||| || ||||||||||| |
|
|
| T |
13378502 |
tttttccatatccacctaggccaacaatggaatagacagagatatcttctctgttacttgcatcccttagaagatactcaacaatttgttctttatcttt |
13378601 |
T |
|
| Q |
478 |
gtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcatctcctcgttggt-gctcctccgtgactcccactgattgaaa |
576 |
Q |
| |
|
|||||||||||||||||| | || |||| ||||| ||||||||||||| || ||| || || |||| | | |||| |||||||||| || || |
|
|
| T |
13378602 |
gtctcttccatatactttggatttagtgatgatagaagtagtttggcgccactc--catgtcttc--tggtagatgctccatgactcccac---atgtaa |
13378694 |
T |
|
| Q |
577 |
tccaaactttttcctttcttcagcaatatcctcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcgtaggatgg |
676 |
Q |
| |
|
||||||||| ||| |||||||||||| | |||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| |
|
|
| T |
13378695 |
tccaaacttgatccggtcttcagcaataacatcaatctttttagcaacctctttcatcctctttccaatacctcggcgagccaaaatcttcttaggatgg |
13378794 |
T |
|
| Q |
677 |
aaactagtgatgcactt---gttgcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtacataagcagtgtcacccagttttt |
773 |
Q |
| |
|
|||| |||||| ||||| || | ||||||| ||||| || |||| ||| |||| || |||||||||||||| | || || ||| | || | |
|
|
| T |
13378795 |
aaacgagtgatccacttgtcgtcgtctccatgtgctttggatcttatcgaatattcgtctaatatatcatcaagaatatgcgctacatcagttaacttct |
13378894 |
T |
|
| Q |
774 |
gcagccagttcctcacaggatcgtttgttatttgcttcttttcagcatcttttagtacatcacggattgtggtgaggttttcatttagcttctgggtcaa |
873 |
Q |
| |
|
||||||| | | |||| || ||||||||||||||| |||||||||||| || ||| | || |||| ||||| ||| || ||||||||||||||| |
|
|
| T |
13378895 |
gcagccaatcttttacagcatgacttgttatttgcttctcttcagcatctttgaggacagcccgaattgcagtgagatttccacatagcttctgggtcaa |
13378994 |
T |
|
| Q |
874 |
ttctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccaaggttttctatcacgattccaagtaaagcttcagccatttagtaggtatga |
973 |
Q |
| |
|
|||||||||||||||||||| || || ||| | | ||||||||||||||||||||| ||||| ||||||||||| | |||||||||| | |||||||| |
|
|
| T |
13378995 |
ttctccaacacccaaaaaggttgaaagctcttgttgaacaaaagatccaaggttttgaatcacagttccaagtaaaacatcagccattttgcaggtatga |
13379094 |
T |
|
| Q |
974 |
gaacagaaatgaa |
986 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13379095 |
taacagaaatgaa |
13379107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 40 - 207
Target Start/End: Original strand, 13378155 - 13378328
Alignment:
| Q |
40 |
agttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttcttt------ccaagttgcaacaaagactttaacttattc |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| || ||| |||||||||| |||| ||||| | | |
|
|
| T |
13378155 |
agttcccatgatggatgcaacaatctcaagtcgcgtagtgactaaaattgatgatcctttccttgtaatgccacattgcaacaaaaacttgaacttttcc |
13378254 |
T |
|
| Q |
134 |
catttctcttggtcttcactccaaacatcatcaagaacaagcaaataccttttgttttgcaaaatatcttgaac |
207 |
Q |
| |
|
||||| | ||||||||| |||| |||||||| || ||||| |||||||||||| ||||||||| |||||||| |
|
|
| T |
13378255 |
catttaacatggtcttcattccacacatcatctagtacaagtaaataccttttgctttgcaaaacttcttgaac |
13378328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 30476374 - 30476416
Alignment:
| Q |
342 |
ttaccctttcatcattgtagaccatttgagcgagtgttgtttt |
384 |
Q |
| |
|
||||||| | ||||||||||||||||||||| ||||||||||| |
|
|
| T |
30476374 |
ttaccctatgatcattgtagaccatttgagcaagtgttgtttt |
30476416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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