View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16919_low_26 (Length: 253)
Name: NF16919_low_26
Description: NF16919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16919_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 23 - 247
Target Start/End: Original strand, 30737710 - 30737934
Alignment:
| Q |
23 |
gataaatgcacaaacttgttgagattactacgtactcaatacaaaggaaaaatttccttttcaaaataaaaaaccctacaaaatttgtaggtactactcc |
122 |
Q |
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| T |
30737710 |
gataaatgcagaaacttgttgagattactacgtactcaatacaaaggaaaaatttcctcttcaaaataaaaaaccctacaaaatttgtaggtactactcc |
30737809 |
T |
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| Q |
123 |
ttccaatatggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatccacttcttcaattaactt |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30737810 |
ttccaatatggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatccacttcttcaattaactt |
30737909 |
T |
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| Q |
223 |
caatcccacatattcttcgacatcc |
247 |
Q |
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||||||||||| |||| ||| |||| |
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| T |
30737910 |
caatcccacattttctgcgagatcc |
30737934 |
T |
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