View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16921_high_2 (Length: 643)

Name: NF16921_high_2
Description: NF16921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16921_high_2
NF16921_high_2
[»] scaffold0139 (2 HSPs)
scaffold0139 (20-634)||(22953-23545)
scaffold0139 (592-634)||(40204-40246)
[»] scaffold0679 (1 HSPs)
scaffold0679 (20-469)||(1662-2110)
[»] chr6 (19 HSPs)
chr6 (20-469)||(28709093-28709541)
chr6 (462-563)||(29045104-29045205)
chr6 (468-560)||(25601439-25601531)
chr6 (452-633)||(25921832-25922012)
chr6 (512-634)||(18982461-18982583)
chr6 (489-554)||(35057412-35057477)
chr6 (489-554)||(13285616-13285681)
chr6 (460-515)||(13765186-13765242)
chr6 (460-515)||(23956702-23956758)
chr6 (460-515)||(31021878-31021934)
chr6 (491-554)||(18585549-18585612)
chr6 (491-554)||(18982282-18982345)
chr6 (473-630)||(1818804-1818960)
chr6 (462-543)||(15891699-15891781)
chr6 (462-543)||(15900784-15900866)
chr6 (592-634)||(15998858-15998900)
chr6 (592-634)||(19825527-19825569)
chr6 (471-515)||(23226014-23226058)
chr6 (484-560)||(24506228-24506304)
[»] chr7 (26 HSPs)
chr7 (20-441)||(11391139-11391559)
chr7 (462-564)||(13315191-13315293)
chr7 (463-564)||(19282887-19282988)
chr7 (471-564)||(38295452-38295544)
chr7 (462-554)||(12754784-12754877)
chr7 (485-554)||(47975010-47975079)
chr7 (484-554)||(14274086-14274156)
chr7 (463-571)||(37539289-37539397)
chr7 (462-554)||(708640-708733)
chr7 (471-543)||(32160330-32160402)
chr7 (566-619)||(16496153-16496207)
chr7 (462-538)||(19195032-19195109)
chr7 (460-515)||(14105584-14105640)
chr7 (460-515)||(14415601-14415657)
chr7 (491-554)||(42565951-42566014)
chr7 (592-634)||(708470-708512)
chr7 (462-515)||(4325937-4325991)
chr7 (600-634)||(8513794-8513828)
chr7 (592-634)||(15575690-15575732)
chr7 (462-543)||(16550132-16550214)
chr7 (462-543)||(16615448-16615530)
chr7 (592-634)||(19195581-19195622)
chr7 (462-543)||(29052312-29052394)
chr7 (592-634)||(43745625-43745667)
chr7 (460-515)||(14188450-14188506)
chr7 (471-515)||(44190373-44190417)
[»] chr3 (24 HSPs)
chr3 (20-441)||(5842400-5842820)
chr3 (463-634)||(29907477-29907650)
chr3 (463-634)||(29948643-29948816)
chr3 (463-634)||(29997797-29997970)
chr3 (471-564)||(12917423-12917515)
chr3 (486-554)||(6805046-6805114)
chr3 (471-563)||(45803448-45803539)
chr3 (491-634)||(3160667-3160808)
chr3 (462-554)||(48631172-48631265)
chr3 (491-543)||(13522478-13522530)
chr3 (594-634)||(14641589-14641629)
chr3 (592-634)||(14520415-14520457)
chr3 (463-543)||(16979753-16979834)
chr3 (460-515)||(42367-42423)
chr3 (349-424)||(3592969-3593044)
chr3 (460-515)||(46722743-46722799)
chr3 (468-560)||(50350930-50351022)
chr3 (460-515)||(55291758-55291814)
chr3 (592-634)||(17208493-17208535)
chr3 (462-543)||(22652613-22652695)
chr3 (462-515)||(43549812-43549866)
chr3 (460-515)||(10555146-10555202)
chr3 (460-507)||(13437078-13437126)
chr3 (460-515)||(18890263-18890319)
[»] chr1 (24 HSPs)
chr1 (451-633)||(22145708-22145892)
chr1 (462-634)||(8306444-8306617)
chr1 (462-563)||(17901913-17902014)
chr1 (471-563)||(21239154-21239245)
chr1 (462-563)||(6834006-6834110)
chr1 (471-554)||(7052132-7052215)
chr1 (462-554)||(24723579-24723672)
chr1 (468-564)||(35894946-35895041)
chr1 (477-563)||(21243848-21243933)
chr1 (491-554)||(21188152-21188215)
chr1 (462-543)||(46197875-46197957)
chr1 (491-554)||(44822249-44822312)
chr1 (566-619)||(14294866-14294920)
chr1 (592-634)||(28476775-28476817)
chr1 (592-634)||(38056713-38056755)
chr1 (592-634)||(50544841-50544883)
chr1 (566-619)||(51131316-51131370)
chr1 (592-634)||(12710836-12710878)
chr1 (592-634)||(24719551-24719593)
chr1 (462-515)||(45574176-45574230)
chr1 (463-515)||(23194669-23194722)
chr1 (460-507)||(297195-297243)
chr1 (490-542)||(22350538-22350590)
chr1 (471-543)||(50001326-50001398)
[»] scaffold0007 (4 HSPs)
scaffold0007 (486-634)||(16460-16609)
scaffold0007 (486-634)||(18742-18892)
scaffold0007 (462-542)||(159000-159080)
scaffold0007 (491-554)||(18979-19042)
[»] chr2 (21 HSPs)
chr2 (468-633)||(28652593-28652756)
chr2 (462-582)||(149598-149718)
chr2 (462-554)||(1383771-1383864)
chr2 (462-554)||(19647074-19647167)
chr2 (479-564)||(23801351-23801435)
chr2 (471-563)||(12626543-12626634)
chr2 (491-554)||(45535796-45535859)
chr2 (462-542)||(28345167-28345248)
chr2 (491-551)||(45535666-45535726)
chr2 (463-519)||(14183620-14183677)
chr2 (468-541)||(21915471-21915544)
chr2 (471-563)||(14179839-14179930)
chr2 (490-542)||(18388368-18388420)
chr2 (491-554)||(24884231-24884294)
chr2 (462-543)||(18358097-18358179)
chr2 (592-634)||(21315517-21315559)
chr2 (592-634)||(21335307-21335349)
chr2 (462-543)||(25184029-25184111)
chr2 (460-515)||(21072845-21072901)
chr2 (460-507)||(23338564-23338612)
chr2 (471-515)||(41301086-41301130)
[»] chr4 (17 HSPs)
chr4 (462-620)||(35660728-35660888)
chr4 (462-633)||(16296711-16296883)
chr4 (462-554)||(14549490-14549583)
chr4 (462-554)||(19434778-19434871)
chr4 (462-543)||(10694375-10694457)
chr4 (592-634)||(14631104-14631146)
chr4 (473-554)||(9622339-9622420)
chr4 (475-544)||(26921633-26921702)
chr4 (460-515)||(28386083-28386139)
chr4 (491-554)||(14477502-14477565)
chr4 (592-634)||(16296907-16296949)
chr4 (462-515)||(18230582-18230636)
chr4 (592-634)||(25513820-25513862)
chr4 (471-543)||(10908141-10908213)
chr4 (460-515)||(16277444-16277500)
chr4 (494-554)||(18462896-18462956)
chr4 (460-515)||(53387054-53387110)
[»] scaffold0594 (1 HSPs)
scaffold0594 (462-563)||(2080-2181)
[»] scaffold0021 (2 HSPs)
scaffold0021 (491-634)||(16977-17117)
scaffold0021 (491-634)||(26508-26648)
[»] scaffold0148 (1 HSPs)
scaffold0148 (462-564)||(8681-8783)
[»] scaffold0004 (1 HSPs)
scaffold0004 (475-550)||(66202-66277)
[»] scaffold0149 (1 HSPs)
scaffold0149 (485-554)||(21404-21473)
[»] scaffold0026 (2 HSPs)
scaffold0026 (462-554)||(21962-22055)
scaffold0026 (511-554)||(9915-9958)
[»] chr5 (21 HSPs)
chr5 (462-554)||(36508862-36508955)
chr5 (471-554)||(21503989-21504072)
chr5 (468-560)||(21398911-21399003)
chr5 (592-634)||(16063720-16063762)
chr5 (491-554)||(17875927-17875990)
chr5 (462-543)||(265878-265960)
chr5 (462-543)||(17011568-17011650)
chr5 (460-515)||(27868731-27868787)
chr5 (471-543)||(29448690-29448762)
chr5 (595-634)||(6551331-6551370)
chr5 (491-594)||(16063553-16063655)
chr5 (491-554)||(31456721-31456784)
chr5 (592-634)||(18744843-18744885)
chr5 (484-554)||(30138202-30138272)
chr5 (511-564)||(31621862-31621915)
chr5 (462-515)||(33472720-33472774)
chr5 (566-619)||(36315304-36315358)
chr5 (460-515)||(24594220-24594276)
chr5 (460-515)||(24668314-24668370)
chr5 (460-515)||(24738083-24738139)
chr5 (460-515)||(24750852-24750908)
[»] scaffold0676 (2 HSPs)
scaffold0676 (462-582)||(2654-2774)
scaffold0676 (592-634)||(2850-2892)
[»] scaffold0125 (1 HSPs)
scaffold0125 (468-634)||(28399-28563)
[»] scaffold0061 (2 HSPs)
scaffold0061 (460-634)||(14627-14800)
scaffold0061 (460-634)||(23685-23858)
[»] chr8 (21 HSPs)
chr8 (471-554)||(22483630-22483713)
chr8 (491-551)||(21676713-21676773)
chr8 (462-563)||(12037275-12037376)
chr8 (462-543)||(25657644-25657726)
chr8 (491-554)||(20517175-20517238)
chr8 (491-542)||(20879343-20879394)
chr8 (491-554)||(22344993-22345056)
chr8 (491-554)||(22356653-22356716)
chr8 (592-634)||(4380658-4380700)
chr8 (462-543)||(16198676-16198758)
chr8 (592-634)||(18816336-18816378)
chr8 (592-634)||(21514660-21514702)
chr8 (473-563)||(22610377-22610466)
chr8 (460-515)||(8413905-8413961)
chr8 (460-515)||(19882787-19882843)
chr8 (471-543)||(23478932-23479004)
chr8 (462-543)||(19880663-19880745)
chr8 (462-543)||(26454546-26454628)
chr8 (592-634)||(36732453-36732495)
chr8 (462-554)||(36732603-36732696)
chr8 (490-538)||(42265691-42265739)
[»] scaffold0439 (1 HSPs)
scaffold0439 (484-568)||(12104-12186)
[»] scaffold0058 (2 HSPs)
scaffold0058 (491-634)||(59696-59837)
scaffold0058 (471-515)||(39969-40013)
[»] scaffold0730 (1 HSPs)
scaffold0730 (462-564)||(6614-6716)
[»] scaffold0555 (1 HSPs)
scaffold0555 (471-554)||(8916-8999)
[»] scaffold0046 (1 HSPs)
scaffold0046 (462-543)||(21907-21989)
[»] scaffold0086 (1 HSPs)
scaffold0086 (463-547)||(35612-35697)
[»] scaffold0217 (1 HSPs)
scaffold0217 (490-554)||(28583-28647)
[»] scaffold0213 (2 HSPs)
scaffold0213 (486-542)||(18980-19036)
scaffold0213 (592-634)||(19176-19218)
[»] scaffold0205 (1 HSPs)
scaffold0205 (474-554)||(5735-5815)
[»] scaffold0394 (1 HSPs)
scaffold0394 (491-554)||(7632-7695)
[»] scaffold0369 (1 HSPs)
scaffold0369 (592-631)||(15659-15698)
[»] scaffold0113 (1 HSPs)
scaffold0113 (471-538)||(35342-35409)
[»] scaffold0035 (1 HSPs)
scaffold0035 (471-554)||(43906-43989)
[»] scaffold1256 (1 HSPs)
scaffold1256 (592-634)||(2241-2283)
[»] scaffold1186 (1 HSPs)
scaffold1186 (592-634)||(1989-2031)
[»] scaffold0231 (1 HSPs)
scaffold0231 (592-634)||(17562-17604)
[»] scaffold0184 (1 HSPs)
scaffold0184 (566-619)||(385-439)
[»] scaffold0138 (1 HSPs)
scaffold0138 (462-543)||(20937-21019)
[»] scaffold0034 (1 HSPs)
scaffold0034 (462-543)||(29346-29428)
[»] scaffold0005 (1 HSPs)
scaffold0005 (592-634)||(186237-186279)
[»] scaffold1939 (1 HSPs)
scaffold1939 (495-572)||(1-77)
[»] scaffold0040 (1 HSPs)
scaffold0040 (462-554)||(106280-106373)
[»] scaffold0436 (1 HSPs)
scaffold0436 (471-543)||(8810-8882)
[»] scaffold0256 (1 HSPs)
scaffold0256 (484-544)||(1970-2030)
[»] scaffold0083 (1 HSPs)
scaffold0083 (471-543)||(1787-1859)
[»] scaffold0878 (1 HSPs)
scaffold0878 (592-631)||(3466-3505)
[»] scaffold0462 (2 HSPs)
scaffold0462 (486-541)||(1135-1190)
scaffold0462 (486-541)||(6641-6696)
[»] scaffold0230 (1 HSPs)
scaffold0230 (491-554)||(6913-6976)
[»] scaffold0092 (1 HSPs)
scaffold0092 (491-554)||(38561-38624)
[»] scaffold0516 (1 HSPs)
scaffold0516 (592-634)||(5346-5388)
[»] scaffold0364 (1 HSPs)
scaffold0364 (462-515)||(8005-8059)
[»] scaffold0247 (1 HSPs)
scaffold0247 (592-634)||(1045-1087)
[»] scaffold0203 (1 HSPs)
scaffold0203 (592-634)||(17981-18023)
[»] scaffold0057 (1 HSPs)
scaffold0057 (462-543)||(69983-70065)
[»] scaffold0056 (1 HSPs)
scaffold0056 (592-634)||(18244-18286)
[»] scaffold0017 (1 HSPs)
scaffold0017 (484-542)||(23476-23534)
[»] scaffold0337 (1 HSPs)
scaffold0337 (484-560)||(3068-3144)
[»] scaffold0220 (1 HSPs)
scaffold0220 (592-632)||(13918-13958)
[»] scaffold0180 (1 HSPs)
scaffold0180 (490-542)||(28507-28559)
[»] scaffold0151 (1 HSPs)
scaffold0151 (471-515)||(9946-9990)
[»] scaffold0001 (2 HSPs)
scaffold0001 (460-507)||(169279-169327)
scaffold0001 (460-507)||(176632-176680)


Alignment Details
Target: scaffold0139 (Bit Score: 432; Significance: 0; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 20 - 634
Target Start/End: Original strand, 22953 - 23545
Alignment:
Q  20 tttcgttcctagtcattgttatacacagtacataaacaaagtttctgagatgccataaccgattctaatatatatgctcttaatttcaaattaaacaagc 119  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  22953 tttcgttcctaatcattgttatacactgtacataaacaaagtttctgagatgccataaccggttttaatatatatgctcttaatttcaaattaaacaagc 23052  T
Q  120 agacttagtttaataggaacatgtaactaatctcctcgatacatggtttttgactcctggtagatataaatcatatagaatcatcgatgtacaaacataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  23053 agacttagtttaataggaacatgtaactaatctcctcgatacatggtttttgactcctggtagatataaatcatatagactcatcgatgtacaaacacaa 23152  T
Q  220 aacaacgagataattaattatattcacaaggaataaatcttgcgaccgattaaagcaacaattatatttaattaaatatatatgcatatacctatgatat 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||  |||||||||||||||||||||||    
T  23153 aacaacgagataattaattatattcacaaggaataaatcttgcgaccgattaaagca------atatttaattaa--atatatgcatatacctatgatat 23244  T
Q  320 catcataattcaaagactacaaatctcacatataattgcagcagcacaaagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatgga 419  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| | |||||  |||||||||||||||| |||||||||||||||||||| |||||    
T  23245 catcataattcaaagactacaaatctaacatacaattgcagcagcac-aggtacatgaatttaacattgaatttatcaaaagatcatgaaaagcgatgga 23343  T
Q  420 aaacaaaacccaacaccacccacatgagtacacaacccttaccccaaatttataggaaactcttcctatgattattctacaacctgaatatcaattatta 519  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | |||||||||    
T  23344 aaacaaaacccaaaactacccacatgagtacacaacccttaccccaaatttataggaaactcttcctatgattattctacaatttgaaca-caattatta 23442  T
Q  520 ccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctctaatcctcaaactaacaacaactacaaggttaaacc 619  Q
    |||            ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  23443 cct------------ttacctactctttcaacaattcaattttaaattctaaccttaatttctctaatcctcaaactaacaacaactgcaaggtttaacc 23530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 40246 - 40204
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||| ||||||||||| |||||||||| |||||||||||||    
T  40246 aaactatcaacaactacatggttaaacccttttttagaattat 40204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 20 - 469
Target Start/End: Complemental strand, 2110 - 1662
Alignment:
Q  20 tttcgttcctagtcattgttatacacagtacataaacaaagtttctgagatgccataaccgattctaatatatat--gctcttaatttcaaattaaacaa 117  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||| |||||||    
T  2110 tttcgttcctagtaattgttatacacagtacatgaacaaagtttctgagatgccataaccggttcttatatatatatgctcttaatttcaaactaaacaa 2011  T
Q  118 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttttgactcctggtagatataaatcatatagaatcatcgatgtacaaacat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||     
T  2010 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttt-gactcctggtagatattaatcatatagactcatcgatgtacaaacag 1912  T
Q  218 aaaacaacgagataattaattatattcacaaggaataaatcttgcgaccgattaaagcaacaattatatttaattaaatatatatgcatatacctatgat 317  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  1911 aaaacaacgagataattagttatattcagaaggaataaatcttgcaaccgattaaagcaacaattatatttaatttaatatat--gcatatacctatgat 1814  T
Q  318 atcatcataattcaaagactacaaatctcacatataattgcagcagcacaaagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatg 417  Q
     ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||    
T  1813 ttcatcgtaattcaaagactacaaatctaacatataattgcagcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatg 1714  T
Q  418 gaaaacaaaacccaacaccacccacatgagtacacaacccttaccccaaatt 469  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  1713 gaaaacaaaacccaacactacccacatgagtacacaaccctaatcccaaatt 1662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 334; Significance: 0; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 20 - 469
Target Start/End: Original strand, 28709093 - 28709541
Alignment:
Q  20 tttcgttcctagtcattgttatacacagtacataaacaaagtttctgagatgccataaccgattctaatatatat--gctcttaatttcaaattaaacaa 117  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||| |||||||    
T  28709093 tttcgttcctagtaattgttatacacagtacatgaacaaagtttctgagatgccataaccggttcttatatatatatgctcttaatttcaaactaaacaa 28709192  T
Q  118 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttttgactcctggtagatataaatcatatagaatcatcgatgtacaaacat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||     
T  28709193 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttt-gactcctggtagatattaatcatatagactcatcgatgtacaaacag 28709291  T
Q  218 aaaacaacgagataattaattatattcacaaggaataaatcttgcgaccgattaaagcaacaattatatttaattaaatatatatgcatatacctatgat 317  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  28709292 aaaacaacgagataattagttatattcagaaggaataaatcttgcaaccgattaaagcaacaattatatttaatttaatat--atgcatatacctatgat 28709389  T
Q  318 atcatcataattcaaagactacaaatctcacatataattgcagcagcacaaagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatg 417  Q
     ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||    
T  28709390 ttcatcgtaattcaaagactacaaatctaacatataattgcagcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatg 28709489  T
Q  418 gaaaacaaaacccaacaccacccacatgagtacacaacccttaccccaaatt 469  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  28709490 gaaaacaaaacccaacactacccacatgagtacacaaccctaatcccaaatt 28709541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 462 - 563
Target Start/End: Original strand, 29045104 - 29045205
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||||||| ||||||    
T  29045104 cccaaatttgatagaaaactctacctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaa-tcaatt 29045202  T
Q  561 tta 563  Q
    |||    
T  29045203 tta 29045205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 25601531 - 25601439
Alignment:
Q  468 tttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||| ||| |||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||| ||| ||||||| ||||    
T  25601531 tttatagaaaattcttcctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaattaaatt 25601439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 452 - 633
Target Start/End: Original strand, 25921832 - 25922012
Alignment:
Q  452 caacccttaccccaaatttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaac 551  Q
    ||||||| |||| |||||||||| ||||| |||||||||||||||||||||||||| | |||| |||||||||||||||  |||||  |||| |||| ||    
T  25921832 caaccctaacccaaaatttatagaaaacttttcctatgattattctacaacctgaacaccaatcattaccttaattcatcagattatttactctttctac 25921931  T
Q  552 aattcaattttaaattctaactttaatttctctaatcctcaaa--ctaacaacaactacaaggttaaacccctttttagaatta 633  Q
    || |||||||||  ||| ||| |||| ||||  || | |||||  |||  ||||||||||||||||||||| ||||||| ||||    
T  25921932 aa-tcaattttagtttcaaaccttaa-ttctacaa-catcaaaacctattaacaactacaaggttaaacccttttttaggatta 25922012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 512 - 634
Target Start/End: Original strand, 18982461 - 18982583
Alignment:
Q  512 aattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctctaatcctcaaac-taacaacaactacaa 610  Q
    |||||||||  ||||||||   |||||||||| ||||| ||| |||||||||| |||||||  |||||||||||||| |||||| || ||||||||||||    
T  18982461 aattattactctaattcatcatattacctactctttcaccaaatcaattttaa-ttctaaccctaatttctctaatcatcaaacctagcaacaactacaa 18982559  T
Q  611 ggttaaacccctttttagaattat 634  Q
    |||||||||| |||| ||||||||    
T  18982560 ggttaaaccctttttcagaattat 18982583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 554
Target Start/End: Original strand, 35057412 - 35057477
Alignment:
Q  489 gattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||||||| ||||| | ||| | ||||||||||||||||||  ||||||||||    
T  35057412 gattattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaat 35057477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 554
Target Start/End: Original strand, 13285616 - 13285681
Alignment:
Q  489 gattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||||||| ||||| | ||| | ||| ||||||||||||||  ||||||||||    
T  13285616 gattattctacaacctgaataacaattttcaccatgattaattggattacctacactttcaacaat 13285681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 13765186 - 13765242
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  13765186 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 13765242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 23956702 - 23956758
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  23956702 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 23956758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 31021934 - 31021878
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  31021934 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 31021878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 18585549 - 18585612
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||||||| |||  ||||||||||| ||||| |||  ||||||||||    
T  18585549 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaat 18585612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 18982282 - 18982345
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||| ||| |||  ||| |||||||||||||||||  ||||||||||    
T  18982282 ttattctacaacctgaacatcgatttttatattagttcattggattacctacgctttcaacaat 18982345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 630
Target Start/End: Original strand, 1818804 - 1818960
Alignment:
Q  473 aggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaac 572  Q
    |||||||||  |||||| ||||||||||| |||||  ||| |  |||| |||||||| || |||||||||| ||||||||| ||||||||  | | ||||    
T  1818804 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaa-tcaattttgcaatttaac 1818902  T
Q  573 tttaatttctctaatcctc-aaactaacaacaactacaaggttaaacccctttttagaa 630  Q
      |||||||| ||| | || ||||||  |||||||||||| |||||||| |||| ||||    
T  1818903 cctaatttctataa-catcaaaactattaacaactacaagcttaaaccctttttcagaa 1818960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 15891781 - 15891699
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| ||||| |||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  15891781 cccaaatttgataggaaactcaacctatgtttattttacagcctgaacttcaattcttatgttaattcattgaattacctact 15891699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 15900866 - 15900784
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| ||||| |||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  15900866 cccaaatttgataggaaactcaacctatgtttattttacagcctgaacttcaattcttatgttaattcattgaattacctact 15900784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 15998858 - 15998900
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  15998858 aaactaacaacaactacaaggttaaactctttttcagaattat 15998900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 19825569 - 19825527
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  19825569 aaactaacaacaactacaaggttaaaacctttttcagaattat 19825527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 23226058 - 23226014
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||   |||||||||||||||||||||||| |||||||    
T  23226058 ataggaaacttaacctatgattattctacaacctgaacatcaatt 23226014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 560
Target Start/End: Complemental strand, 24506304 - 24506228
Alignment:
Q  484 cctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||| ||||||||| |||  ||| ||||||| |||   ||||||||||||||||||||  ||||||||||| ||||    
T  24506304 cctattattattctaaaacaagaacatcaatttttatactaattcattggattacctacactttcaacaattaaatt 24506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 20 - 441
Target Start/End: Complemental strand, 11391559 - 11391139
Alignment:
Q  20 tttcgttcctagtcattgttatacacagtacataaacaaagtttctgagatgccataaccgattctaatatatat--gctcttaatttcaaattaaacaa 117  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||    
T  11391559 tttcgttcctagtaattgttatacacagtacatgaacaaagtttctgagatgccataaccggttcttatatatatatgctcttaatttcaaattaaacaa 11391460  T
Q  118 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttttgactcctggtagatataaatcatatagaatcatcgatgtacaaacat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||     
T  11391459 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttt-gactcctggtagatattaatcatatagactcatcgatgtacaaacag 11391361  T
Q  218 aaaacaacgagataattaattatattcacaaggaataaatcttgcgaccgattaaagcaacaattatatttaattaaatatatatgcatatacctatgat 317  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  11391360 aaaacaacgagataattagttatattcagaaggaataaatcttgcaaccgattaaagcaacaattatatttaattaaatatat--gcatatacctatgat 11391263  T
Q  318 atcatcataattcaaagactacaaatctcacatataattgcagcagcacaaagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatg 417  Q
     ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||    
T  11391262 ttcatcgtaattcaaagactacaaatctaacatataattgcagcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatg 11391163  T
Q  418 gaaaacaaaacccaacaccaccca 441  Q
    |||||||||||||||||| |||||    
T  11391162 gaaaacaaaacccaacactaccca 11391139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 13315293 - 13315191
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||| | |||||||| |||||||||||||| ||||||||| ||||||||| ||||||    
T  13315293 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattatttccttaattcattgggttacctactctttcaacaa-tcaatt 13315195  T
Q  561 ttaa 564  Q
    ||||    
T  13315194 ttaa 13315191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 463 - 564
Target Start/End: Original strand, 19282887 - 19282988
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattt 561  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| ||||||||| |||||||    
T  19282887 ccaaatttgatagaaaactctacctatgattattctacaacctgaagaccaattattaccttagttcatcggattacctactctttcaacaa-tcaattt 19282985  T
Q  562 taa 564  Q
    |||    
T  19282986 taa 19282988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 471 - 564
Target Start/End: Original strand, 38295452 - 38295544
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaa 564  Q
    |||||||||||| ||||||||||||||||| |||||| | |||||||||||||| ||||| |||||||||||| || |||||| ||||||||||    
T  38295452 ataggaaactctacctatgattattctacatcctgaacaccaattattaccttacttcatcggattacctactcttgcaacaa-tcaattttaa 38295544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 12754877 - 12754784
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| | |||||||||| |||||||||  ||||||||||| ||||||||||    
T  12754877 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattactttaattcatcagattacctactctttcaacaat 12754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 554
Target Start/End: Complemental strand, 47975079 - 47975010
Alignment:
Q  485 ctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| | ||||||||||    
T  47975079 ctatgattattctacaacctgaacaccaattattaccttaattcatcggattacctaatctttcaacaat 47975010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 554
Target Start/End: Original strand, 14274086 - 14274156
Alignment:
Q  484 cctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||||||||||||||| |||||||  ||  |||||||||||||||||||||  ||||||||||    
T  14274086 cctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 14274156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 571
Target Start/End: Original strand, 37539289 - 37539397
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattt 561  Q
    |||||||| ||||||||||   |||| ||||||||||||||||||||| ||||| | ||| | ||||||||||||||||||  ||||||||| |||| ||    
T  37539289 ccaaatttgataggaaacttaacctaagattattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaa-tcaaatt 37539387  T
Q  562 taaattctaa 571  Q
     |||||||||    
T  37539388 gaaattctaa 37539397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 708733 - 708640
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   ||||||||||||||||||||| || | |||||||||||||||| |||   ||| |||||| ||||||||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaatccatcatattgcctactctttcaacaat 708640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 543
Target Start/End: Complemental strand, 32160402 - 32160330
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||||||||||||||    
T  32160402 ataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctact 32160330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 566 - 619
Target Start/End: Original strand, 16496153 - 16496207
Alignment:
Q  566 ttctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 619  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  16496153 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 16496207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 538
Target Start/End: Original strand, 19195032 - 19195109
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattac 538  Q
    ||||||||| ||||||||||   |||||||||||||||||| ||||||| ||||| | ||| | ||||||||||||||    
T  19195032 cccaaatttgataggaaacttaacctatgattattctacaatctgaataacaattctcaccatgattcattggattac 19195109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 14105640 - 14105584
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  14105640 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 14105584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 14415657 - 14415601
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  14415657 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 14415601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 42566014 - 42565951
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| |||||||  ||  ||||||||||||||||| |||  ||||||||||    
T  42566014 ttattctacaacctgaacatcaatttctatgttaattcattggattacgtacactttcaacaat 42565951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 708512 - 708470
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||    
T  708512 aaactaacagcaactacaaggttaaaccctttttcagaattat 708470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 4325937 - 4325991
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  4325937 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 4325991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 600 - 634
Target Start/End: Complemental strand, 8513828 - 8513794
Alignment:
Q  600 aacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||| |||||||||||||    
T  8513828 aacaactacaaggttaaacccttttttagaattat 8513794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 15575732 - 15575690
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||    
T  15575732 aaactaacaacaagtacaaggttaaaccctttttcagaattat 15575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 16550214 - 16550132
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||| ||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  16550214 cccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 16550132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 16615448 - 16615530
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||| ||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  16615448 cccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 16615530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 19195581 - 19195622
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||||||||||||||||||||||| ||||||| ||||||||    
T  19195581 aaactaacaacaactacaaggttaaa-cccttttcagaattat 19195622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 29052394 - 29052312
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  |||||| |||| ||||||||||    
T  29052394 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattaattgaattacctact 29052312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 43745625 - 43745667
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| | ||||||    
T  43745625 aaactaacaacaactacaaggttaaaccctttttcataattat 43745667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 14188506 - 14188450
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   ||||||||||||||||||| |||| |||||||    
T  14188506 accccaaatttgataggaaacttaacctatgattattctacaacttgaacatcaatt 14188450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 44190417 - 44190373
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||   |||||||||||||||||||||||| |||||||    
T  44190417 ataggaaacttaacctatgattattctacaacctgaacatcaatt 44190373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 20 - 441
Target Start/End: Original strand, 5842400 - 5842820
Alignment:
Q  20 tttcgttcctagtcattgttatacacagtacataaacaaagtttctgagatgccataaccgattctaatatatat--gctcttaatttcaaattaaacaa 117  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||| |||||||    
T  5842400 tttcgttcctagtaattgttatacacagtacatgaacaaagtttctgagatgccataaccggttcttatatatatatgctcttaatttcaaaataaacaa 5842499  T
Q  118 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttttgactcctggtagatataaatcatatagaatcatcgatgtacaaacat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||     
T  5842500 gcagacttagtttaataggaacatgtaactaatctcctcgatacatggtttt-gactcctggtagatattaatcatatagactcatcgatgtacaaacag 5842598  T
Q  218 aaaacaacgagataattaattatattcacaaggaataaatcttgcgaccgattaaagcaacaattatatttaattaaatatatatgcatatacctatgat 317  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5842599 aaaacaacgagataattaattatattcagaaggaataaatcttgcaaccgattaaagcaacaattatatttaattaa--atatatgcatatacctatgat 5842696  T
Q  318 atcatcataattcaaagactacaaatctcacatataattgcagcagcacaaagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatg 417  Q
     ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||    
T  5842697 ttcatcgtaattcaaagactacaaatctaacatataattgcagcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatg 5842796  T
Q  418 gaaaacaaaacccaacaccaccca 441  Q
    |||||||||||||||||| |||||    
T  5842797 gaaaacaaaacccaacactaccca 5842820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 463 - 634
Target Start/End: Original strand, 29907477 - 29907650
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattt 561  Q
    |||||||| |||||||| ||| |||||| ||||||| ||||  ||| | |||| | |||| ||||||||   |||||||||  |||||||||||||||||    
T  29907477 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29907576  T
Q  562 taaattctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||| |||||||  |||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29907577 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 29907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 463 - 634
Target Start/End: Original strand, 29948643 - 29948816
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattt 561  Q
    |||||||| |||||||| ||| |||||| ||||||| ||||  ||| | |||| | |||| ||||||||   |||||||||  |||||||||||||||||    
T  29948643 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29948742  T
Q  562 taaattctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||| |||||||  |||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29948743 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 29948816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 463 - 634
Target Start/End: Original strand, 29997797 - 29997970
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattt 561  Q
    |||||||| |||||||| ||| |||||| ||||||| ||||  ||| | |||| | |||| ||||||||   |||||||||  |||||||||||||||||    
T  29997797 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29997896  T
Q  562 taaattctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||| |||||||  |||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29997897 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 29997970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 471 - 564
Target Start/End: Complemental strand, 12917515 - 12917423
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaa 564  Q
    |||||||||||| |||||||||||| ||||||||||| | |||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||    
T  12917515 ataggaaactctacctatgattattttacaacctgaacaccaattattaccttacttcatcggattacctacttttccaacaa-tcaattttaa 12917423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 486 - 554
Target Start/End: Complemental strand, 6805114 - 6805046
Alignment:
Q  486 tatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||| ||||||||||    
T  6805114 tatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 6805046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 563
Target Start/End: Complemental strand, 45803539 - 45803448
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatttta 563  Q
    |||||||||||  |||||| ||||||||||||||| | ||||||| |||  ||||||||| |||||||||||| ||||||||| |||||||||    
T  45803539 ataggaaactcaacctatgtttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaacaa-tcaatttta 45803448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 491 - 634
Target Start/End: Complemental strand, 3160808 - 3160667
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctctaatcct 590  Q
    |||||||||||||| || ||||||| |||  ||||||||||| |||||||||| ||||||||| |||| ||  |||| |||   |||||||| ||||       
T  3160808 ttattctacaacctaaacatcaatttttatattaattcattgaattacctactctttcaacaa-tcaaattgcaatt-taaacctaatttctataatatc 3160711  T
Q  591 caaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
     |||||| |||||||||||| ||||||||| |||||||||||||    
T  3160710 aaaactatcaacaactacaaagttaaacccatttttagaattat 3160667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 48631172 - 48631265
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| |||||||||  | |||||  ||||||||||||||||| ||||||| |||  ||||||||||| |||||||||  ||||||||||    
T  48631172 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaat 48631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 13522530 - 13522478
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||||||||||| ||||||| |||  ||||||||||||||||||||||    
T  13522530 ttattctacaacctgaacatcaattcttatgttaattcattggattacctact 13522478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 634
Target Start/End: Complemental strand, 14641629 - 14641589
Alignment:
Q  594 actaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  14641629 actaacaacaactacaaggttaaacccttttttagaattat 14641589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 14520415 - 14520457
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  14520415 aaactaacaacaactacaaggttaaacctttttttagaattat 14520457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 543
Target Start/End: Original strand, 16979753 - 16979834
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  16979753 ccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 16979834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 42367 - 42423
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  42367 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 42423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 424
Target Start/End: Original strand, 3592969 - 3593044
Alignment:
Q  349 atataattgcagcagcacaaagt-acacaaatttaacattgaattaatcaaaagatcatgaaaagcaatggaaaaca 424  Q
    |||||||||||||| || ||||  ||||||||||||||| ||||| || ||||||||||||||| ||||| ||||||    
T  3592969 atataattgcagcaacagaaagggacacaaatttaacat-gaattcattaaaagatcatgaaaaacaatgtaaaaca 3593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 46722799 - 46722743
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  46722799 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 46722743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 50351022 - 50350930
Alignment:
Q  468 tttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||| |||||||||||||| ||||| ||||||||||| ||||||   |||  ||  ||||||||||||||||  ||| ||||||| ||||    
T  50351022 tttatagaaaactcttcctatgtttattatacaacctgaacatcaatctgtacactatgtcattggattacctacgcttttaacaattaaatt 50350930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 55291814 - 55291758
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  55291814 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 55291758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 17208493 - 17208535
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  17208493 aaactaacaacaactacaaggttaaatcctttttcagaattat 17208535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 22652613 - 22652695
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  |||||||| | |||||||||||    
T  22652613 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcactagattacctact 22652695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 43549866 - 43549812
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  43549866 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 43549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 10555146 - 10555202
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||    
T  10555146 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 10555202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 507
Target Start/End: Original strand, 13437078 - 13437126
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaa 507  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||||    
T  13437078 accccaaatttgataggaaactcaacctatgtttattctacaacctgaa 13437126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 18890263 - 18890319
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   ||||||||||||| |||||||||| |||||||    
T  18890263 accccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaatt 18890319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 451 - 633
Target Start/End: Complemental strand, 22145892 - 22145708
Alignment:
Q  451 acaacccttaccccaaattta-taggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttca 549  Q
    |||||||| |||||||||||  ||| ||||||| |||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||  ||||    
T  22145892 acaaccctaaccccaaattttgtagaaaactctacctatgattaatctacaacttgaacatcaattattactttaattcattggattacctactccttca 22145793  T
Q  550 acaattcaattttaaattctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaatta 633  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  22145792 acaattcaattttaatttctaaccttaatttatctaatcctcaaacctaacaacaactacaaggttaaaccctttttcagaatta 22145708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 462 - 634
Target Start/End: Original strand, 8306444 - 8306617
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| ||||||||||   ||||||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  8306444 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaa-tcaatt 8306542  T
Q  561 ttaaattctaactttaatttctctaatcctc-aaactaacaacaactaca--aggttaaacccctttttagaattat 634  Q
    |||| ||| |||  |||||||| ||| | || |||||||||| ||| |||  | |||||||||||||||||||||||    
T  8306543 ttaatttcaaaccctaatttctataa-catcaaaactaacaa-aacgacaacatgttaaacccctttttagaattat 8306617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 563
Target Start/End: Complemental strand, 17902014 - 17901913
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||| | |||||||||||||| ||||| |||||| ||||| ||||||||| ||||||    
T  17902014 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattatctactctttcaacaa-tcaatt 17901916  T
Q  561 tta 563  Q
    |||    
T  17901915 tta 17901913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 471 - 563
Target Start/End: Complemental strand, 21239245 - 21239154
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatttta 563  Q
    |||| ||||||| |||||||||||||||||| ||||| | |||||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  21239245 atagaaaactctacctatgattattctacaaactgaacaccaattattaccttagttcatcggattacctactctttcaacaa-tcaatttta 21239154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 462 - 563
Target Start/End: Original strand, 6834006 - 6834110
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaat---tcattggattacctactttttcaacaattca 557  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||| | |||||||||||||| |   |||| |||||||||||| ||||||||| |||    
T  6834006 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcatcggattacctactctttcaacaa-tca 6834104  T
Q  558 atttta 563  Q
    ||||||    
T  6834105 atttta 6834110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 471 - 554
Target Start/End: Complemental strand, 7052215 - 7052132
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||   |||||||||||| ||||||||||| | ||||||||||||||||||||  ||||||||||| ||||||||||    
T  7052215 ataggaaacttaacctatgattattttacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 7052132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 24723672 - 24723579
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| | ||||||||||||||||||||   ||||| |||| ||||||||||    
T  24723672 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaacaat 24723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 468 - 564
Target Start/End: Original strand, 35894946 - 35895041
Alignment:
Q  468 tttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaa 564  Q
    ||||||| ||||||||| ||||||||||| || ||||||| | |||||||||||||| ||||| |||||||| | | ||||||||| ||||||||||    
T  35894946 tttatagaaaactcttcatatgattattccaccacctgaacaccaattattaccttacttcatcggattaccaattctttcaacaa-tcaattttaa 35895041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 563
Target Start/End: Complemental strand, 21243933 - 21243848
Alignment:
Q  477 aactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatttta 563  Q
    |||||| |||||||||||||||||||||||| | ||||||||| | |||||||| |||||| ||||| |||| |||| |||||||||    
T  21243933 aactctgcctatgattattctacaacctgaacaccaattattaacctaattcatcggattatctactctttctacaa-tcaatttta 21243848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 21188215 - 21188152
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||||||||||  ||||||||||    
T  21188215 ttattctacaacctgaacatcaatttttatattaattcattggattacctacactttcaacaat 21188152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 46197957 - 46197875
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||||||||||||||    
T  46197957 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctact 46197875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 44822312 - 44822249
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| |||||||  ||  |||||||||||||||||||||  ||||||||||    
T  44822312 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 44822249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 566 - 619
Target Start/End: Complemental strand, 14294920 - 14294866
Alignment:
Q  566 ttctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 619  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  14294920 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 14294866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 28476817 - 28476775
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  28476817 aaactaacaacaactacaaggttaaaccctttttcagaattat 28476775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 38056755 - 38056713
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  38056755 aaactaacaacaactacaaggttaaaccctttttcagaattat 38056713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 50544841 - 50544883
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattat 50544883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 566 - 619
Target Start/End: Original strand, 51131316 - 51131370
Alignment:
Q  566 ttctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 619  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  51131316 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 51131370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 12710836 - 12710878
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||||||||||||||||| |||||||| |||| ||||||||    
T  12710836 aaactaacaacaactacaagattaaaccctttttcagaattat 12710878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 24719593 - 24719551
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  24719593 aaactaataacaactacaaggttaaaccctttttcagaattat 24719551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 45574230 - 45574176
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  45574230 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 45574176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 23194722 - 23194669
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    |||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  23194722 ccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 23194669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 507
Target Start/End: Original strand, 297195 - 297243
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaa 507  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||||    
T  297195 accccaaatttgataggaaactcaacctatgtttattctacaacctgaa 297243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 22350538 - 22350590
Alignment:
Q  490 attattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    |||| ||||||||||||| ||||||| |||  ||||||||||| |||||||||    
T  22350538 attactctacaacctgaacatcaatttttatattaattcattgaattacctac 22350590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 543
Target Start/End: Original strand, 50001326 - 50001398
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||||||  | |||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  50001326 ataggaaactcaacatatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 50001398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 486 - 634
Target Start/End: Complemental strand, 16609 - 16460
Alignment:
Q  486 tatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctcta 585  Q
    |||||||||||| |||||| || | ||||||||||| ||||||||   |||||||||| ||||||||| ||||||||||  ||||||  |||||||||||    
T  16609 tatgattattctgcaacctaaacaccaattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctcta 16510  T
Q  586 atcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  16509 atcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 16460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 486 - 634
Target Start/End: Complemental strand, 18892 - 18742
Alignment:
Q  486 tatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctcta 585  Q
    |||||| ||||| |||||| || | ||||||||||| |||||||||  |||||||||| ||||||||| ||||||||||  ||||||  |||||||||||    
T  18892 tatgatcattctccaacctaaacaccaattattaccctaattcattatattacctactctttcaacaaatcaattttaatctctaaccctaatttctcta 18793  T
Q  586 atcctca--aactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||| |||  | |||||||||||||||||| ||||||  |||| ||||||||    
T  18792 atcatcatgacctaacaacaactacaaggctaaaccgtttttaagaattat 18742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 542
Target Start/End: Complemental strand, 159080 - 159000
Alignment:
Q  462 cccaaatttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    |||||||| |||||||||  | | ||| |||| ||||||||||||| ||||||| |||  |||||||||||||| ||||||    
T  159080 cccaaattgataggaaaccttacttattattactctacaacctgaacatcaatttttatattaattcattggatcacctac 159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 19042 - 18979
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||| ||| |||  ||| |||||||||||||||||  ||||||||||    
T  19042 ttattctacaacctgaacatcgatttttatattagttcattggattacctacactttcaacaat 18979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 633
Target Start/End: Complemental strand, 28652756 - 28652593
Alignment:
Q  468 tttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaatt 567  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||    | |    
T  28652756 tttatagaaaactcttcctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaattaaatt---caat 28652660  T
Q  568 ctaactttaatttctctaatcctc-aaactaacaacaactac-aaggttaaacccctttttagaatta 633  Q
    |||||  |||||||| ||| | || ||||||||||||||||| |||| ||||||| |||| |||||||    
T  28652659 ctaaccctaatttctataa-catcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 582
Target Start/End: Complemental strand, 149718 - 149598
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| ||||||||||   ||||||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  149718 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaa-tcaatt 149620  T
Q  561 ttaaattctaactttaatttct 582  Q
    |||| ||| |||  ||||||||    
T  149619 ttaatttcaaaccctaatttct 149598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 1383864 - 1383771
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| | |||||||||| ||||||||| |||||||||||| ||||||||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaat 1383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 19647074 - 19647167
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| |||||||||  | |||||  ||||||||||||||||| ||||||| |||  ||||||||||||||||||||| |||||||||||    
T  19647074 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctacattttcaacaat 19647167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 479 - 564
Target Start/End: Original strand, 23801351 - 23801435
Alignment:
Q  479 ctcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaa 564  Q
    |||| ||||| |||||||||||||||||| | || ||||||||||||||||| || ||||||||| ||||||||| ||||||||||    
T  23801351 ctctacctattattattctacaacctgaacaccagttattaccttaattcatcgggttacctactctttcaacaa-tcaattttaa 23801435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 471 - 563
Target Start/End: Complemental strand, 12626634 - 12626543
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatttta 563  Q
    |||||||||||  | |||| ||||||||||||||||| ||||||| ||   ||||||||| |||||||||||| ||||||||| |||||||||    
T  12626634 ataggaaactcaacttatgtttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaa-tcaatttta 12626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 45535796 - 45535859
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||||||||||  ||||||||||    
T  45535796 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaacaat 45535859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 542
Target Start/End: Complemental strand, 28345248 - 28345167
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    ||||||||| ||||||||||   ||||||||||||||||||||| |||| ||||| | ||| | ||||||||||||||||||    
T  28345248 cccaaatttgataggaaacttaacctatgattattctacaacctcaataacaattttcaccatgattcattggattacctac 28345167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 491 - 551
Target Start/End: Original strand, 45535666 - 45535726
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaac 551  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||||||||||  |||||||    
T  45535666 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaac 45535726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 14183677 - 14183620
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattatta 519  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||| | |||||||||    
T  14183677 ccaaatttgataggaaactctacctatgattattccacaacctgaacaccaattatta 14183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 541
Target Start/End: Original strand, 21915471 - 21915544
Alignment:
Q  468 tttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattaccta 541  Q
    ||||||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||    
T  21915471 tttataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattaccta 21915544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 563
Target Start/End: Complemental strand, 14179930 - 14179839
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatttta 563  Q
    ||||||||| || ||||||||||||| |||||||||| | ||||||||| | || |||||  ||||| ||||| |||| |||| |||||||||    
T  14179930 ataggaaacactacctatgattattccacaacctgaacaccaattattaacctagttcatcagattatctactctttctacaa-tcaatttta 14179839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 18388420 - 18388368
Alignment:
Q  490 attattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    |||| ||||||||||||| ||||||| |||  |||||||||||||||||||||    
T  18388420 attactctacaacctgaacatcaatttttatattaattcattggattacctac 18388368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 24884231 - 24884294
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||| |||||||| |||||||  ||  |||||||||||||||||||||  ||||||||||    
T  24884231 ttattctataacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 24884294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 18358179 - 18358097
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||| ||||    
T  18358179 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacatact 18358097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 21315559 - 21315517
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  21315559 aaactaataacaactacaaggttaaaccctttttcagaattat 21315517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 21335349 - 21335307
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  21335349 aaactaataacaactacaaggttaaaccctttttcagaattat 21335307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 25184029 - 25184111
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| ||||||||||  |||||  |||||| |||  ||||||||||| ||||||||||    
T  25184029 cccaaatttgataggaaactcaacctatgtttattctacagtctgaacttcaattcttatgttaattcattgaattacctact 25184111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 21072901 - 21072845
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   ||||||||||||| |||||||||| |||||||    
T  21072901 accccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaatt 21072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 507
Target Start/End: Complemental strand, 23338612 - 23338564
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaa 507  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||||    
T  23338612 accccaaatttgataggaaactcaacctatgtttattctacaacctgaa 23338564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 41301130 - 41301086
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||   |||||||||||||||||||||||| |||||||    
T  41301130 ataggaaacttaacctatgattattctacaacctgaacatcaatt 41301086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 5e-27; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 462 - 620
Target Start/End: Original strand, 35660728 - 35660888
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| ||||||||||   | |||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| | ||||||| ||||||    
T  35660728 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttacttcatcggattacctactctctcaacaa-tcaatt 35660826  T
Q  561 ttaaattctaactttaatttctctaatcctcaaa--ctaacaacaactacaaggttaaaccc 620  Q
    |||||||| |||  |||||||||||||| |||||  | ||||||||| || | |||||||||    
T  35660827 ttaaattcaaaccctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccc 35660888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 462 - 633
Target Start/End: Original strand, 16296711 - 16296883
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| ||||||||||   ||||||||||||| |||||||||| | |||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  16296711 cccaaatttgataggaaacttaacctatgattattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaacaa-tcaatt 16296809  T
Q  561 ttaaattctaactttaatttctctaatcctc-aaactaacaacaactaca--aggttaaacccctttttagaatta 633  Q
    |||| ||| |||  |||||||| ||| | || |||||||||| ||| |||  | ||||||||||||||||||||||    
T  16296810 ttaatttcaaaccctaatttctataa-catcaaaactaacaa-aacaacaatatgttaaacccctttttagaatta 16296883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 14549490 - 14549583
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   | |||||||||||||||||||||| | ||||||||||||||||||||  |||||| |||| ||||||||||    
T  14549490 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacatactctttcaacaat 14549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 19434871 - 19434778
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| | |||||||| | |||||||||  ||||||||||| ||||||||||    
T  19434871 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattatttctttaattcatcagattacctactctttcaacaat 19434778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 10694457 - 10694375
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||||||||||||||    
T  10694457 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctact 10694375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 14631104 - 14631146
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  14631104 aaactaacaacaactacaaggttaaaccctttttcagaattat 14631146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 554
Target Start/End: Original strand, 9622339 - 9622420
Alignment:
Q  473 aggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||  |||||| ||||||||||| |||||  ||| |  |||| |||||||| ||||||||||||| ||||||||||    
T  9622339 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaat 9622420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 544
Target Start/End: Complemental strand, 26921702 - 26921633
Alignment:
Q  475 gaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactt 544  Q
    |||| |||||||||| |||||||||||| |||| |||||||  |||   |||||||||||||||||||||    
T  26921702 gaaaatcttcctatgtttattctacaacatgaacatcaatttgtacacaaattcattggattacctactt 26921633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 28386083 - 28386139
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  28386083 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 28386139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 14477502 - 14477565
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||| ||||| |||||||  ||  |||||||||||||||||||||  ||||||||||    
T  14477502 ttattctacaatctgaacatcaatttctatgttaattcattggattacctacactttcaacaat 14477565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 16296907 - 16296949
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  16296907 aaactaacaacaactaccaggttaaaccctttttcagaattat 16296949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 18230582 - 18230636
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||| |||||||    
T  18230582 cccaaatttgataggaaacttatcctatgattatcctacaacctgaacatcaatt 18230636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 25513820 - 25513862
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||    
T  25513820 aaactaacaacaactacaatgttaaaccctttttcagaattat 25513862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 543
Target Start/End: Complemental strand, 10908213 - 10908141
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||||||  |||||| |||||||||| ||||||  |||||| |||  |||||| |||| ||||||||||    
T  10908213 ataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattaattgaattacctact 10908141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 16277500 - 16277444
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||    
T  16277500 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 16277444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 18462896 - 18462956
Alignment:
Q  494 ttctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||| ||||| ||||||| | |  |||||||||||||||||||||  ||||||||||    
T  18462896 ttctacaatctgaacatcaattttcatgttaattcattggattacctacactttcaacaat 18462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 53387110 - 53387054
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||    
T  53387110 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 53387054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 563
Target Start/End: Original strand, 2080 - 2181
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| |||| ||| ||| |||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| ||||||||| ||||||    
T  2080 cccaaatttgatagaaaaatctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaa-tcaatt 2178  T
Q  561 tta 563  Q
    |||    
T  2179 tta 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 491 - 634
Target Start/End: Original strand, 16977 - 17117
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctctaatcct 590  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||||||||||| ||||||||||  ||||  ||||  |||   |||||||| ||||  |    
T  16977 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaat--taaacctaatttctataat-at 17073  T
Q  591 caaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||| |||||||||||| ||||||||| |||| ||||||||    
T  17074 caaactatcaacaactacaaagttaaaccctttttaagaattat 17117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 491 - 634
Target Start/End: Original strand, 26508 - 26648
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctctaatcct 590  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||||||||||| ||||||||||  ||||  ||||  |||   |||||||| ||||  |    
T  26508 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaat--taaacctaatttctataat-at 26604  T
Q  591 caaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||| |||||||||||| ||||||||| |||| ||||||||    
T  26605 caaactatcaacaactacaaagttaaaccctttttaagaattat 26648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 8681 - 8783
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| |||| ||||||| |||||||||| ||| ||||||||| | ||||||||||||||||||||  ||||||||||| ||||||||| ||||||    
T  8681 cccaaatttgatagaaaactctacctatgattactctgcaacctgaacaccaattattaccttaattcatctgattacctactctttcaacaa-tcaatt 8779  T
Q  561 ttaa 564  Q
    ||||    
T  8780 ttaa 8783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 475 - 550
Target Start/End: Complemental strand, 66277 - 66202
Alignment:
Q  475 gaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaa 550  Q
    |||||||| |||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| ||||||    
T  66277 gaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaa 66202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 554
Target Start/End: Original strand, 21404 - 21473
Alignment:
Q  485 ctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||| ||||||||||    
T  21404 ctatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 21473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 21962 - 22055
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| | ||||| ||||||||||||||  ||||||||||| ||||||||||    
T  21962 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattcttaccttaattcatcagattacctactctttcaacaat 22055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 554
Target Start/End: Original strand, 9915 - 9958
Alignment:
Q  511 caattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||    
T  9915 caattattaccttaattcatcagattacctactctttcaacaat 9958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 36508955 - 36508862
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   ||||||||||||||||||||| || | ||||||||||||||||||||  ||||||||||| ||||||||||    
T  36508955 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaat 36508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 471 - 554
Target Start/End: Original strand, 21503989 - 21504072
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||  |||||||||||||||||||||||| |||| || |||  |||||||||||||| ||||||| ||||||||||    
T  21503989 ataggaaactcaacctatgattattctacaacctgaacatcagttcttatgttaattcattggatcacctactctttcaacaat 21504072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 21399003 - 21398911
Alignment:
Q  468 tttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||  |||  ||||| ||| ||||||||||| |||  |||||| ||||    
T  21399003 tttatagaaaactcttcctatgtttattctacaacctgaacatcaatttgtacactaattaattagattacctactcttttgacaattaaatt 21398911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 16063720 - 16063762
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  16063720 aaactaacaacaactacaaggttaaacccttttttagaattat 16063762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 17875927 - 17875990
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| |||||||  ||  |||||||||||||||||||||  ||||||||||    
T  17875927 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 17875990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 265878 - 265960
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  |||||||| |||||||||||||    
T  265878 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcactggattacctact 265960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 17011568 - 17011650
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  17011568 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 17011650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 27868787 - 27868731
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  27868787 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 27868731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 543
Target Start/End: Original strand, 29448690 - 29448762
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||||||  |||||| |||||||||| ||||||  |||||| |||  |||||||||||| |||||||||    
T  29448690 ataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggtttacctact 29448762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 595 - 634
Target Start/End: Complemental strand, 6551370 - 6551331
Alignment:
Q  595 ctaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  6551370 ctaacaacaactacaaggttaaaccctttttcagaattat 6551331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 594
Target Start/End: Original strand, 16063553 - 16063655
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctctaatcct 590  Q
    |||||||||||||| || ||||| |||||||| | |||||  ||||||  ||| | |||| ||| ||||||||||||| |||  |||||||||||||| |    
T  16063553 ttattctacaacctaaacatcaaatattacctcacttcatcagattactcactctctcaaaaat-caattttaaattcaaaccctaatttctctaatcat 16063651  T
Q  591 caaa 594  Q
    ||||    
T  16063652 caaa 16063655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 31456721 - 31456784
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| |||||||  ||  ||||||||||| |||||||||  ||||||||||    
T  31456721 ttattctacaacctgaacatcaattcatatgttaattcattgaattacctacactttcaacaat 31456784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 18744843 - 18744885
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  18744843 aaactaataacaactacaaggttaaaccctttttcagaattat 18744885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 554
Target Start/End: Complemental strand, 30138272 - 30138202
Alignment:
Q  484 cctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||||||||||||||| ||||  |  ||  ||||||||||||||| |||||  ||||||||||    
T  30138272 cctatgattattctacaacctgaacatcatatcatatgttaattcattggattgcctacactttcaacaat 30138202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 564
Target Start/End: Original strand, 31621862 - 31621915
Alignment:
Q  511 caattattaccttaattcattggattacctact-ttttcaacaattcaattttaa 564  Q
    |||||||||||||||||||| || ||||||||| |||||||||| ||||||||||    
T  31621862 caattattaccttaattcatcggtttacctactcttttcaacaa-tcaattttaa 31621915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 33472774 - 33472720
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  33472774 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 33472720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 619
Target Start/End: Original strand, 36315304 - 36315358
Alignment:
Q  566 ttctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 619  Q
    |||||||  |||||||||||||||||||| ||||| ||||||| |||||||||||    
T  36315304 ttctaaccctaatttctctaatcctcaaacctaacgacaactataaggttaaacc 36315358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 24594276 - 24594220
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||    
T  24594276 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24594220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 24668370 - 24668314
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||    
T  24668370 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24668314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 24738139 - 24738083
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||    
T  24738139 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24738083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 24750908 - 24750852
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| |||||||    
T  24750908 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24750852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 582
Target Start/End: Original strand, 2654 - 2774
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| ||||||||||   | ||||||||||| |||| ||||| | ||||||||||||||||||||  ||||||||||| ||||||||| ||||||    
T  2654 cccaaatttgataggaaacttaacgtatgattattcaacaatctgaacaccaattattaccttaattcatcagattacctactctttcaacaa-tcaatt 2752  T
Q  561 ttaaattctaactttaatttct 582  Q
    |||| ||| |||  ||||||||    
T  2753 ttaatttcaaaccctaatttct 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 2850 - 2892
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  2850 aaactaacaacaactacaaggttaaaccctttttcagaattat 2892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 634
Target Start/End: Original strand, 28399 - 28563
Alignment:
Q  468 tttataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaatt 567  Q
    ||||||| |||||||||||||| ||||||||||||||||  |||||||  |||  ||||| ||||||||||||||| ||| ||||||| ||||    | |    
T  28399 tttatagaaaactcttcctatgtttattctacaacctgaccatcaatttgtacactaattaattggattacctactcttttaacaattaaatt---caat 28495  T
Q  568 ctaactttaatttctctaatcctcaaactaacaacaactac-aaggttaaacccctttttagaattat 634  Q
    |||||  |||| ||| |||     ||||||||||||||||| |||||||||||| |||| ||||||||    
T  28496 ctaaccctaatctctataacataaaaactaacaacaactacaaaggttaaaccctttttcagaattat 28563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 634
Target Start/End: Complemental strand, 14800 - 14627
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaa 558  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||||  |||||| |||  |||||| ||| ||||||||||| ||| ||||| ||||    
T  14800 accccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt-aacaa-tcaa 14703  T
Q  559 ttttaaattctaactttaatttctctaatcctc-aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||  |||  | ||   |||||||||||||| || |||||||||||||||||||  |||||||| |||| ||||||||    
T  14702 ttccaaa-ccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattat 14627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 634
Target Start/End: Complemental strand, 23858 - 23685
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaa 558  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||||  |||||| |||  |||||| ||| ||||||||||| ||| ||||| ||||    
T  23858 accccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt-aacaa-tcaa 23761  T
Q  559 ttttaaattctaactttaatttctctaatcctc-aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||  |||  | ||   |||||||||||||| || |||||||||||||||||||  |||||||| |||| ||||||||    
T  23760 ttccaaa-ccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattat 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 554
Target Start/End: Original strand, 22483630 - 22483713
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||  |||||| ||||||||||||||||| ||||||| |||  |||||||||  ||||||||||| ||||||||||    
T  22483630 ataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaat 22483713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 491 - 551
Target Start/End: Complemental strand, 21676773 - 21676713
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaac 551  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||||||||||| |||||||    
T  21676773 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaac 21676713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 563
Target Start/End: Complemental strand, 12037376 - 12037275
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||| || | ||||||||| | |||||||| |||||| ||||| |||| |||| ||||||    
T  12037376 cccaaatttgataggagtctctacctatgattattctacaacctaaacaccaattattaacctaattcatcggattatctactctttctacaa-tcaatt 12037278  T
Q  561 tta 563  Q
    |||    
T  12037277 tta 12037275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 25657726 - 25657644
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| |||||| ||||||| |||  ||||||||||| ||||||||||    
T  25657726 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctact 25657644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 20517238 - 20517175
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||| ||| |||  |||||||||||||||||||||  ||||||||||    
T  20517238 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 20517175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 542
Target Start/End: Original strand, 20879343 - 20879394
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||||||||||    
T  20879343 ttattctacaacctgaacatcaattcttatgttaattcattggattacctac 20879394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 22344993 - 22345056
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||| ||| |||  |||||||||||||||||||||  ||||||||||    
T  22344993 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 22356653 - 22356716
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||| ||| |||  |||||||||||||||||||||  ||||||||||    
T  22356653 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22356716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 4380700 - 4380658
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  4380700 aaactaacaacaactacaaggttaaaccctttttcagaattat 4380658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 16198676 - 16198758
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  16198676 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 16198758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 18816378 - 18816336
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  18816378 aaactaacaacaactacaaggttaaaccctttttcagaattat 18816336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 21514660 - 21514702
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  21514660 aaactaacaacaactacaaggttaaaccctttttaagaattat 21514702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 563
Target Start/End: Complemental strand, 22610466 - 22610377
Alignment:
Q  473 aggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatttta 563  Q
    |||||||||  |||||| ||||||||||| |||||  ||| |  |||| |||||||| ||||||||||||| ||||||||| |||||||||    
T  22610466 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaa-tcaatttta 22610377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 8413961 - 8413905
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  8413961 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 8413905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 19882787 - 19882843
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  19882787 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 19882843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 543
Target Start/End: Original strand, 23478932 - 23479004
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  23478932 ataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 23479004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 19880663 - 19880745
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||  ||||||||||    
T  19880663 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatttaattacctact 19880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 26454546 - 26454628
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  | |||| |||  ||||||||||| ||||||||||    
T  26454546 cccaaatttgataggaaactcaacctatgtttattctacagcctgaactttaattcttatgttaattcattgaattacctact 26454628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 36732495 - 36732453
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  36732495 aaactaacaacaactacaaggttaaactctttttcagaattat 36732453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 36732696 - 36732603
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   |||||||||||||||||| |||||  ||  |  |||| |||||||| ||| ||||||||| ||||||||||    
T  36732696 cccaaatttgataggaaacttgacctatgattattctacaatctgaacctccttccttacgttaattcaatggtttacctactctttcaacaat 36732603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 538
Target Start/End: Complemental strand, 42265739 - 42265691
Alignment:
Q  490 attattctacaacctgaatatcaattattaccttaattcattggattac 538  Q
    |||| ||||||||||||| ||||||| |||  |||||||||||||||||    
T  42265739 attactctacaacctgaacatcaatttttatattaattcattggattac 42265691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 568
Target Start/End: Original strand, 12104 - 12186
Alignment:
Q  484 cctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattc 568  Q
    |||||||||||||||||||||||| ||||||| |||  |||||||||||| ||||||||| ||| ||||| ||||||| ||||||    
T  12104 cctatgattattctacaacctgaacatcaattcttatgttaattcattgggttacctactcttt-aacaa-tcaatttgaaattc 12186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 491 - 634
Target Start/End: Complemental strand, 59837 - 59696
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaactttaatttctctaatcct 590  Q
    |||||||||||||| || ||||||| |||  |||||||||||||||||||||| ||||||||||  ||||  ||  | |||   |||||||| ||||       
T  59837 ttattctacaacctaaacatcaatttttatattaattcattggattacctactatttcaacaatcaaattgcaa--tataaacctaatttctataatatc 59740  T
Q  591 caaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
     |||||| |||||||||||| ||||||||| |||| ||||||||    
T  59739 aaaactatcaacaactacaaagttaaaccctttttcagaattat 59696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 40013 - 39969
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||   |||||||||||||||||||||||| |||||||    
T  40013 ataggaaacttaacctatgattattctacaacctgaacatcaatt 39969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 6716 - 6614
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||||||| |||| ||||||| | |||||||| |||||||| |||| |  |||||||||||||||||||   |||||||||| ||||||||| ||||||    
T  6716 cccaaatttgatagaaaactctacttatgattactctacaacatgaacacgaattattaccttaattcatctaattacctactctttcaacaa-tcaatt 6618  T
Q  561 ttaa 564  Q
    ||||    
T  6617 ttaa 6614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 554
Target Start/End: Complemental strand, 8999 - 8916
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||  |||| | ||||||||||||||||| ||||||| |||| |||||||||| || |||||||| | ||||||||    
T  8999 ataggaaactcaacctaagtttattctacaacctgaacatcaattcttacgttaattcattcgactacctactctctcaacaat 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 21989 - 21907
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| |||||| ||||||| |||  ||||||||||| ||||||||||    
T  21989 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctact 21907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 547
Target Start/End: Complemental strand, 35697 - 35612
Alignment:
Q  463 ccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctacttttt 547  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||| |||||  |||  |||||||||| |||| |||||||||    
T  35697 ccaaatttgataggaaactaaacctatgattattctacaacctgaataacaatttgtacactaattcattgaattatctacttttt 35612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 28583 - 28647
Alignment:
Q  490 attattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||||||||| ||||||| |||  |||||||||| ||||||||||  ||||||||||    
T  28583 attattctacaacctgaacatcaatttttatgttaattcattagattacctacactttcaacaat 28647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 18980 - 19036
Alignment:
Q  486 tatgattattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    |||||||||||||||||||||||| ||||| | ||| | ||||||||||||||||||    
T  18980 tatgattattctacaacctgaataacaattttcaccatgattcattggattacctac 19036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 19176 - 19218
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  19176 aaactaataacaactacaaggttaaaccctttttcagaattat 19218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 554
Target Start/End: Complemental strand, 5815 - 5735
Alignment:
Q  474 ggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||  |||||| ||||||||||||||||| |||||||  |||  |||||||||| |||| ||| ||||||||||||    
T  5815 ggaaactcaacctatgtttattctacaacctgaacatcaatttgtacactaattcattgaattatctagtttttcaacaat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 7695 - 7632
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||||||| | || ||||||||||||||| ||||| ||| |||||||    
T  7695 ttattctacaacctgaacatcaattttcacgttaattcattggatttcctacatttccaacaat 7632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 592 - 631
Target Start/End: Complemental strand, 15698 - 15659
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaat 631  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15698 aaactaacaacaactacaaggttaaacccttttttagaat 15659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 538
Target Start/End: Original strand, 35342 - 35409
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattac 538  Q
    |||||||||||  |||||| ||||||||||||||||| ||||||| |||  |||||| ||||||||||    
T  35342 ataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaatttattggattac 35409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 554
Target Start/End: Complemental strand, 43989 - 43906
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||||||||  |||||| |||||||||||||| || |||||||  |||  ||||| |||| |||| ||||||||||||||||    
T  43989 ataggaaactcaacctatgtttattctacaacctaaacatcaatttgtacactaattaattgaattatctactttttcaacaat 43906  T

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Target: scaffold1256 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 2283 - 2241
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  2283 aaactaacaacaactacaaggttaaaccctttttcagaattat 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 1989 - 2031
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  1989 aaactaacaacaactacaaggttaaaccctttttcagaattat 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 17604 - 17562
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  17604 aaactaacaacaactacaaggttaaaccctttttcagaattat 17562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 566 - 619
Target Start/End: Complemental strand, 439 - 385
Alignment:
Q  566 ttctaactttaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 619  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  439 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 20937 - 21019
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  20937 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 21019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 29428 - 29346
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  29428 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 29346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 186279 - 186237
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  186279 aaactaacaacaactacaaggttaaaccctttttcagaattat 186237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 572
Target Start/End: Original strand, 1 - 77
Alignment:
Q  495 tctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaattttaaattctaac 572  Q
    |||||||| |||| ||||||| |||  ||||||| |||||||||||||| ||||||||| |||||||| |||| ||||    
T  1 tctacaacatgaacatcaattcttatgttaattctttggattacctactctttcaacaa-tcaattttcaattttaac 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 106373 - 106280
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||| ||||||||||   |||| ||||||| ||||||||||| |  |||||||||||||||||||   ||||||| || ||||||||||    
T  106373 cccaaatttgataggaaacttaacctacgattattttacaacctgaacaataattattaccttaattcatcaaattaccttctctttcaacaat 106280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 543
Target Start/End: Original strand, 8810 - 8882
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  8810 ataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 8882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 2030 - 1970
Alignment:
Q  484 cctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactt 544  Q
    ||||||||||||||||||| |||| | || |||||||||||||||||  ||||| ||||||    
T  2030 cctatgattattctacaacatgaacaccacttattaccttaattcatcagattatctactt 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 543
Target Start/End: Original strand, 1787 - 1859
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    |||||||||||  |||||| |||||||||| ||||||  |||||| |||  ||||||||||| ||||||||||    
T  1787 ataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctact 1859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 592 - 631
Target Start/End: Complemental strand, 3505 - 3466
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaat 631  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  3505 aaactaacaacaactacaaggttaaaccctttttcagaat 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 1135 - 1190
Alignment:
Q  486 tatgattattctacaacctgaatatcaattattaccttaattcattggattaccta 541  Q
    |||||||||||||||||||||||| ||| | | ||| | |||||||||||||||||    
T  1135 tatgattattctacaacctgaataacaagtttgaccatgattcattggattaccta 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 6641 - 6696
Alignment:
Q  486 tatgattattctacaacctgaatatcaattattaccttaattcattggattaccta 541  Q
    |||||||||||||||||||||||| ||| | | ||| | |||||||||||||||||    
T  6641 tatgattattctacaacctgaataacaagtttgaccatgattcattggattaccta 6696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 6976 - 6913
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    ||||||||||||||||| ||||||| |||  ||||||||||| ||||| |||  ||||||||||    
T  6976 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaat 6913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 38624 - 38561
Alignment:
Q  491 ttattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaat 554  Q
    |||||| |||||||||| ||||||| | |  |||||||||||||||||||||  ||||||||||    
T  38624 ttattccacaacctgaacatcaattttcatgttaattcattggattacctacactttcaacaat 38561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 5388 - 5346
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  5388 aaacgaacaacaactacaaggttaaaccctttttaagaattat 5346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 8005 - 8059
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||| |||||||    
T  8005 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 1045 - 1087
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||||||||| |||||||||||||||| |||| ||||||||    
T  1045 aaactaacaacatctacaaggttaaaccctttttcagaattat 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Complemental strand, 18023 - 17981
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  18023 aaactaacaacaactacaaggttaaatcctttttcagaattat 17981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 70065 - 69983
Alignment:
Q  462 cccaaattt-ataggaaactcttcctatgattattctacaacctgaatatcaattattaccttaattcattggattacctact 543  Q
    ||||||||| |||||||||||  |||||  || ||||||| ||||||  |||||| |||  ||||||||||||||||||||||    
T  70065 cccaaatttgataggaaactcaacctattttttttctacagcctgaacttcaattcttatgttaattcattggattacctact 69983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 634
Target Start/End: Original strand, 18244 - 18286
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaattat 634  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  18244 aaaccaacaacaactacaaggttaaaccctttttcagaattat 18286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 542
Target Start/End: Original strand, 23476 - 23534
Alignment:
Q  484 cctatgattattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    ||||| |||||||||||||||||| ||||||| | |  |||||||||| ||||||||||    
T  23476 cctattattattctacaacctgaaaatcaattttcatgttaattcatttgattacctac 23534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 560
Target Start/End: Original strand, 3068 - 3144
Alignment:
Q  484 cctatgattattctacaacctgaatatcaattattaccttaattcattggattacctactttttcaacaattcaatt 560  Q
    ||||| ||||||||| |||| ||| ||||||| |||   |||||||||| |||||||||  ||||||||||| ||||    
T  3068 cctattattattctaaaaccagaacatcaatttttatactaattcattgaattacctacactttcaacaattaaatt 3144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 632
Target Start/End: Original strand, 13918 - 13958
Alignment:
Q  592 aaactaacaacaactacaaggttaaacccctttttagaatt 632  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  13918 aaactaacaacaacttcaaggttaaaccctttttcagaatt 13958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 28559 - 28507
Alignment:
Q  490 attattctacaacctgaatatcaattattaccttaattcattggattacctac 542  Q
    |||| ||||||||||||  ||||||| |||  |||||||||||||||||||||    
T  28559 attactctacaacctgaccatcaatttttatattaattcattggattacctac 28507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 515
Target Start/End: Original strand, 9946 - 9990
Alignment:
Q  471 ataggaaactcttcctatgattattctacaacctgaatatcaatt 515  Q
    ||||||||||   |||||||||||||||||||||||| |||||||    
T  9946 ataggaaacttaacctatgattattctacaacctgaacatcaatt 9990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 507
Target Start/End: Original strand, 169279 - 169327
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaa 507  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  169279 accccaaatttgataggaaacttaacctatgattattctacaacctgaa 169327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 507
Target Start/End: Original strand, 176632 - 176680
Alignment:
Q  460 accccaaattt-ataggaaactcttcctatgattattctacaacctgaa 507  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  176632 accccaaatttgataggaaacttaacctatgattattctacaacctgaa 176680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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