View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16923_high_17 (Length: 309)
Name: NF16923_high_17
Description: NF16923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16923_high_17 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 11 - 309
Target Start/End: Original strand, 46681510 - 46681808
Alignment:
| Q |
11 |
tatcccgaagagcgaattatgaaagttattattcttacgccttggtcgattttgaatccacgaaccatcatttccatgaaatgatccatcttgaggtgta |
110 |
Q |
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| T |
46681510 |
tatcccgaagagcgaattatgaaagttattattcttacgccttggtcgattttgaatccacgaaccatcatttccatgaaatgatccatcttgaggtgta |
46681609 |
T |
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| Q |
111 |
ggcattgttggttcacttgtaaatctaccaaggtacctcactttactatcctgcctctcaggaataggcacagaaacaaaagattgaatcttactattag |
210 |
Q |
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| T |
46681610 |
ggcattgttggttcacttgtaaatctaccaaggtacctcactttactatcctgcctctcaggaataggcacagaaacaaaagattgaatcttactattag |
46681709 |
T |
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| Q |
211 |
cttctcctttggcttcaaaaatggctttgatttcggtatgtccttgttgatcagctaaatctcttggactccaaccatatttatcttgtttgtcaatgt |
309 |
Q |
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| T |
46681710 |
cttctcctttggcttcaaaaatggctttgatttcggtatgtccttgttgatcagctaaatctcttggactccaaccatatttatcttgtttgtcaatgt |
46681808 |
T |
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