View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16923_low_13 (Length: 361)
Name: NF16923_low_13
Description: NF16923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16923_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 20 - 311
Target Start/End: Original strand, 2329910 - 2330201
Alignment:
| Q |
20 |
cttctaacatttcttcattattttctcaaacacctcttcactgttacttacttgcatcaatcctaattctctcattgatggctccacctgctagatccta |
119 |
Q |
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| T |
2329910 |
cttctaacatttcttcattattttctcaaacacctcttcactgttacttacttgcatcaatcctaattctctcattgatggctccacctgctagatccta |
2330009 |
T |
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| Q |
120 |
tcatctacatggactcaaacttgcaacaataatcactgtgcttttcatctttttcttctgcatgctattttccaaatcaggtaattaaaaagctaccacc |
219 |
Q |
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| T |
2330010 |
tcatctacatggactcaaacttgcaacaataatcactgtgcttttcatctttttcttctgcatgctattttccaaatcaggtaattaaaaagctaccacc |
2330109 |
T |
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| Q |
220 |
aacctcatacctattcaagctaaacaaaactgtttcaattttctgttgagaattaattctagaaatccgaatagttattttcattcatagtt |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||| |
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| T |
2330110 |
gtcctcatacctattcaagctaaacaaaactgtttcaattgtctgttgagaattatttgtagaaatccaaatagttattttcattcatagtt |
2330201 |
T |
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