View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16923_low_28 (Length: 237)
Name: NF16923_low_28
Description: NF16923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16923_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37602353 - 37602574
Alignment:
| Q |
1 |
tactgctggtagattcagtgaggacgaggtagtttattataataagccattatcttaattaactgttctagattctagaaaacagtaagtaggatttcat |
100 |
Q |
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| T |
37602353 |
tactgctggtagattcagtgaggacgaggtagtttattataataagccattatcttaattaactgttctagattctagaaaacagtaattaggatttcat |
37602452 |
T |
|
| Q |
101 |
gcaagtaatatattaacaagtgggggtacnnnnnnncatcttggnnnnnnnaatgttacacatgcacagtattagcatttcacattctacataatttcat |
200 |
Q |
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||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37602453 |
gcaagtaatatattaacaagtgggggtactttttttcatcttggtttttttaatgttacacatgcacagtattagcatttcacattctacataatttcat |
37602552 |
T |
|
| Q |
201 |
cttaaattctgaagttttttct |
222 |
Q |
| |
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||||||||||||| |||||||| |
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| T |
37602553 |
cttaaattctgaatttttttct |
37602574 |
T |
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