View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16923_low_30 (Length: 224)
Name: NF16923_low_30
Description: NF16923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16923_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 38339891 - 38340081
Alignment:
| Q |
23 |
ctttctaattagtagtatatcaacacatatgagtattttattttgtgatttgtggttaaatgaatgtatgatctataggttacatctcctggaggaaatg |
122 |
Q |
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| T |
38339891 |
ctttctaattagtagtatatcaacacatatgtgtattttattttgtgatttgtggttaaatgaatgtatgatctataggttacatctcccggaggaaatg |
38339990 |
T |
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| Q |
123 |
tggtacactctttgaaaggaacgtcaggggacaagtttgagttaaaagccatacaaggtggaatttacaagttttgctttcacaatcctat |
213 |
Q |
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| T |
38339991 |
tggtacactctttgaaaggaacgtcaggggacaagtttgagttaaaagccatacatggtggaatttacaagttttgctttcacaatcctat |
38340081 |
T |
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