View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16926_high_14 (Length: 246)
Name: NF16926_high_14
Description: NF16926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16926_high_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 11073576 - 11073331
Alignment:
| Q |
1 |
ttctataacaccaactttcaacaaatttaacccttccttcctaactacataagttgtatactagcatcaacttgaaacccaatagtataacttaacaatt |
100 |
Q |
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| T |
11073576 |
ttctataacaccaactttcaacaaatttaacccttccttcctaactacataagttgcatactagcatcaacttgaaacccaatagtataacttaacaatt |
11073477 |
T |
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| Q |
101 |
ccataaccagaagaaaagaaaaaggagcatgaccaactcagaaataaagtgaaattggatttgatctaatatccagtttcatcctttcatctaaccaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11073476 |
ccataaccagaagaaaagaaaaaggagcatgaccaactcagaaataaagtgaaattggatttgatctaatatccagtttcatcctttcatctaaccaaaa |
11073377 |
T |
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| Q |
201 |
agtcctaatgtacgtgtaattgtgaagaaacaaaaaacatgcctag |
246 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
11073376 |
agtcctaatgtgcgtgtaattgtgaagaaacaaaaaacatgcctag |
11073331 |
T |
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