View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16926_low_10 (Length: 301)
Name: NF16926_low_10
Description: NF16926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16926_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 37348787 - 37349072
Alignment:
| Q |
1 |
ttgagataacttatggaagaaacaacagtataatatatatgaagaattcagagaagaagaagaaaggtagaaacataccaggagggnnnnnnntgacaga |
100 |
Q |
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| T |
37348787 |
ttgagataacttatggaagaaacaacagtataatatatatgaagaattcagagaagaagaagaaaggtagaaacataccaggagggaaaaaaatgacaga |
37348886 |
T |
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| Q |
101 |
caccctcctagctagaggaggacccacaaaggtactaggaggatgttcttgcttccacgttacaaaaggtgtaacaagtggttgaacttagaacatggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37348887 |
caccctcctagctagaggaggacccacaaaggtactaggaggatgttcttgcttccacgttacaaaaggtgtaacaagtggttgaacttagaacatggtt |
37348986 |
T |
|
| Q |
201 |
attgattttgttaatgtttagttttatttttaatgtgtttcggtataaacacgacaaaagggaagtgtgtttttaattaaaatttc |
286 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37348987 |
attgattttgttaatgtttgattttatttttaatgtgtttcggtataaacacgacaaaagggaagtgtgtttttaattaaaatttc |
37349072 |
T |
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