View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16926_low_5 (Length: 381)
Name: NF16926_low_5
Description: NF16926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16926_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 10 - 360
Target Start/End: Original strand, 9728638 - 9728988
Alignment:
| Q |
10 |
attattctactactctatttttatttgctaaatcgtttaatttgtttgtcattgttatttattctacttttcttgtcgaatgtgcatgtctataatagag |
109 |
Q |
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| T |
9728638 |
attattctactactctatttttatttgctaaatcgtttaatttgtttgtcattgttatttattctacttttcttgtcgaatgtgcatgtctataatagag |
9728737 |
T |
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| Q |
110 |
acaaatta-gtataacacgtcaaaatatatttagattttttcaacacatcaaagacacacaatccattatagatagggaaatgcatatttgtttacaagc |
208 |
Q |
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| T |
9728738 |
acaaattaagtataatacgtcaaaatatatttagattttttcaacacatcaaagacacacaatccattatagatagggaaatgcatatttgtttacaagc |
9728837 |
T |
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| Q |
209 |
taatggcactatatagcatagcctacccaacnnnnnnnnnnnnggatatttacaaaaagagtacctaaaatccaacttcatgtagtccataattttgaag |
308 |
Q |
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| T |
9728838 |
taatggcactatatagcatagcctacccaac-aaaaaaaaaaaggatatttacaaaaagagtacctaaaatccaacttcatgtagtccataattttgaag |
9728936 |
T |
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| Q |
309 |
ttgtaatgttaaaattccataaaatcaagcactccatttcccttctcaaacc |
360 |
Q |
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| T |
9728937 |
ttgtaatgttaaaattccataaaatcaagcactccatttcccttctcaaacc |
9728988 |
T |
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