View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16927_high_10 (Length: 239)
Name: NF16927_high_10
Description: NF16927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16927_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 35752031 - 35751797
Alignment:
| Q |
1 |
tgttaatggtttcatagttcatgcatcatttcaacacactaaccaatgacatagaatgagttggaaaatgaaagttaaa-ggtgcgccaccattcttttt |
99 |
Q |
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| T |
35752031 |
tgttaatggtttcagagttcatgcatcatttcaacacactaaccaataacatagaatgagttggaaaatgaaagttaaaaggtgcgccaccattcttttt |
35751932 |
T |
|
| Q |
100 |
ataactttttgaaaggttctttgcatatttatttgacatctagagttttacatatatttatatggcttaggtcttatcttatttgtagaccatatattca |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
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| T |
35751931 |
ataactttttgaaaggttctttgcatatttatttgacatctagagttttacatatatttatatggcttaggtcttatcatatttctagaccatatattca |
35751832 |
T |
|
| Q |
200 |
agtgaagaaaatataattttgggccctatgctact |
234 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
35751831 |
agtgaagaaaatataattttgggccctatgatact |
35751797 |
T |
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