View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16927_low_13 (Length: 236)
Name: NF16927_low_13
Description: NF16927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16927_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 32048543 - 32048724
Alignment:
| Q |
39 |
tatactgtggaagagagaccataaattgatagacattaatttatttatttttaaaaatactaagggaactatcaatcctctaactaacatacatttaaag |
138 |
Q |
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| T |
32048543 |
tatactgtggaagagagaccataaattgatagacattaattaatttatttttaaaaatactaagggaactatcgatcatttaactaacatacatttaaag |
32048642 |
T |
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| Q |
139 |
taaactataaaacaaaagttgcctcgttagcatcttattcacgagaagaaaattttattgttaataagatataaattgatgt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32048643 |
taaactataaaacaaaagttgcctcgttagcatcttattcacgagaagaaaaatttattgttaataagatataaattgatgt |
32048724 |
T |
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