View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16928_low_4 (Length: 554)
Name: NF16928_low_4
Description: NF16928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16928_low_4 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 487; Significance: 0; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 21 - 539
Target Start/End: Original strand, 29962904 - 29963422
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
29962904 |
ataataggaaaccttcacatgttaggtaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaacttggtcaag |
29963003 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29963004 |
ttccaacaattgttatttcatcttcaaaagctgcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
29963103 |
T |
|
| Q |
221 |
cattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaa |
320 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
29963104 |
cattttttatggttccaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactttgcactttgaaacttcttagtgcttcaaaa |
29963203 |
T |
|
| Q |
321 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29963204 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
29963303 |
T |
|
| Q |
421 |
ttgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
520 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29963304 |
ttgtagagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
29963403 |
T |
|
| Q |
521 |
tatgcttggagcttttaat |
539 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
29963404 |
tatgcttggagcttttaat |
29963422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 21 - 539
Target Start/End: Complemental strand, 30011894 - 30011376
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30011894 |
ataataggaaaccttcacatgttaggtaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaacttggtcaag |
30011795 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30011794 |
ttccaacaattgttatttcatcttcaaaagctgcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
30011695 |
T |
|
| Q |
221 |
cattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaa |
320 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
30011694 |
cattttttatggttccaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactttgcactttgaaacttcttagtgcttcaaaa |
30011595 |
T |
|
| Q |
321 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30011594 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
30011495 |
T |
|
| Q |
421 |
ttgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
520 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30011494 |
ttgtagagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
30011395 |
T |
|
| Q |
521 |
tatgcttggagcttttaat |
539 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
30011394 |
tatgcttggagcttttaat |
30011376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 21 - 539
Target Start/End: Original strand, 30005651 - 30006169
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
30005651 |
ataattggaaatcttcacatattaggcaaacttccacatagaacacttcaatcactctccaaaaaatatggtccaatcatgtccttacaacttggtcaag |
30005750 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
220 |
Q |
| |
|
||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||| | || |
|
|
| T |
30005751 |
ttccaactattatcatttcatcttcaaaagctgcagaatcattcctcaaaactcatgacatcgtttttgcaagtcgaccaaaggttcaaggatcagatct |
30005850 |
T |
|
| Q |
221 |
cattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaa |
320 |
Q |
| |
|
||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |||| | ||||||||||||||| | |||||||||||| |
|
|
| T |
30005851 |
catgtcttatggttccaaagggatggctttttctgagtatggtccttattggcgtagtgtgaggaaattttgcactttgaaactttttagtgcttcaaaa |
30005950 |
T |
|
| Q |
321 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
420 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||| || || ||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
30005951 |
gttgagatgtttggtcctattaggaaggagaagttggatgttttggttatatctttggagaaagctgccttggagggtgaggttgtgaatgttagtgagg |
30006050 |
T |
|
| Q |
421 |
ttgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
520 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||| || ||| || ||||||||||||||||||| | || ||||| |||| ||||| |||||| |
|
|
| T |
30006051 |
ttgtagagaatcttattgaggatattgtgtataagatgatgtttggtcggagtaagtatgagcaatttgacatgaataagttagttctagaagcaatggc |
30006150 |
T |
|
| Q |
521 |
tatgcttggagcttttaat |
539 |
Q |
| |
|
| || | |||||||||||| |
|
|
| T |
30006151 |
tttgatgggagcttttaat |
30006169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 21 - 500
Target Start/End: Original strand, 29999213 - 29999692
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
29999213 |
ataataggaaaccttcacatgttaggtaaacttccacatagaacacttcaatcactctccaaaagatatggtccaatcatgtccttacaacttggtcaag |
29999312 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| || || |||| ||||| ||| |||| |
|
|
| T |
29999313 |
ttccaacaattgttatttcatcttcaaaaggagcagaatcattcctcaaaacccatgacatcgttttcgcaagccgaccgaagattcaaggatcagagct |
29999412 |
T |
|
| Q |
221 |
cattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaa |
320 |
Q |
| |
|
||| | |||||||| ||||||||| |||||||||||||||||||||||||||| ||| | | |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
29999413 |
catgtcctatggttctaaagggttgcctttttctgagtatggtccttattggcgcagtatgaggaaattttgcactttgaaacttcttagtgcttcaaaa |
29999512 |
T |
|
| Q |
321 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
420 |
Q |
| |
|
||||||| || ||||||||||| || ||||||||| |||||||||||| | || |||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
29999513 |
gttgagaagtcgggtcctattagaaaagaggagttgggtgttttggttaacactttgaagaaagcttctttggtaggtgaggttgtgaatgttagtgaga |
29999612 |
T |
|
| Q |
421 |
ttgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaag |
500 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||| |
|
|
| T |
29999613 |
ttgtcgagaatcttattgaggatattgtgtataagatgatattgggtagaggtaagtatgagcaatttgacttgaagaag |
29999692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 21 - 539
Target Start/End: Complemental strand, 30045503 - 30044985
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
30045503 |
ataatagggaaccttcacatattaggcacccttccacatagaacacttcagtcactctccaaaaaatatggtccaatcatgtccttacaacttggtcaag |
30045404 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
220 |
Q |
| |
|
| ||| | ||||| |||||||||||||||||||||||||||||||||||||| || |||||| ||| ||||| || ||||||| ||||| |||| |||| |
|
|
| T |
30045403 |
tcccagctattgtcatttcatcttcaaaagcagcagaatcattcctcaaaacccacgacatcgttttcgcaagccgaccaaagattcaaggatctgagct |
30045304 |
T |
|
| Q |
221 |
cattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaa |
320 |
Q |
| |
|
||| | ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| | |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
30045303 |
catgtcttatggttccaaagggatggctttttgtgagtatggtccttattggcgtagtgtgaggaaattttgcactttgaaacttcttagtgcttcaaaa |
30045204 |
T |
|
| Q |
321 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
420 |
Q |
| |
|
|||||||||| |||||||||||| || |||||||| | |||||||||| | || |||||| || |||||| |||||||||||||||||||||||| |
|
|
| T |
30045203 |
gttgagatgtctggtcctattagaaaagaggagttgagtattttggttaacactttgaagaaagctgctttggttggtgaggttgtgaatgttagtgagg |
30045104 |
T |
|
| Q |
421 |
ttgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
520 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||| |||| || ||| || ||||||||||||||||||| || |||| ||||||||||||||| |||| |
|
|
| T |
30045103 |
ttgtagagaatctaatagaagatattgtgtataagttgatgtttggtcggagtaagtatgagcaatttgacttgaagagtttggttcaagaaggattggc |
30045004 |
T |
|
| Q |
521 |
tatgcttggagcttttaat |
539 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
30045003 |
tttgattggagcttttaat |
30044985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 21 - 539
Target Start/End: Original strand, 29990509 - 29991027
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||| || |||| |
|
|
| T |
29990509 |
ataataggaaatcttcacatattaggcaaacttccacatagaacacttcaatcactctccaaaaaatatggtccaattatgtctttacaacttggacaag |
29990608 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactca-agcatctcagc |
219 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| || || || ||| | || | | || |
|
|
| T |
29990609 |
ttccaacaattgtcatttcatcttcaaaagcagcagaatcattcctcaaaacccatgacatcgttttcgcaaaccgaccgaa-acttataggagcagaga |
29990707 |
T |
|
| Q |
220 |
tcattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaa |
319 |
Q |
| |
|
|||| | |||||||| ||||||||||| |||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
29990708 |
tcatatcttatggttgcaaagggttggcgttttctaagtacgacccttattggcgtagtgtaaagaaactctgcactttgaaacttcttagtgcttcaaa |
29990807 |
T |
|
| Q |
320 |
agttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgag |
419 |
Q |
| |
|
|||||||| || ||||||||||| | ||||||||| | |||||||||| | || | |||| | |||||||||||||||||||||||| |||||| |
|
|
| T |
29990808 |
agttgagaagtcgggtcctattagaacagaggagttgggtattttggttaacactttgaaaaaagcttctttggtaggtgaggttgtgaatgtcagtgag |
29990907 |
T |
|
| Q |
420 |
attgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatgg |
519 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
29990908 |
attgtagagaatgttattgaagatattgtgtataagatgatattgggtagaggtaagtatgagcaatttgatttgaagaagttggttcaagaaggattgg |
29991007 |
T |
|
| Q |
520 |
ctatgcttggagcttttaat |
539 |
Q |
| |
|
|| || |||||||||||||| |
|
|
| T |
29991008 |
ctttgattggagcttttaat |
29991027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 21 - 539
Target Start/End: Complemental strand, 30071333 - 30070815
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
30071333 |
ataattggaaatcttcacatattaggcaaacttccacatagaacacttcaatcactctccaaaaaatatggtccaatcatgtccttacaacttggtcaag |
30071234 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
220 |
Q |
| |
|
||||||| ||| | ||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||| || ||||||| ||||| |||| |||| |
|
|
| T |
30071233 |
ttccaactattatcatttcatcttcaaaagctgcagaatcatttctcaaaacccatgacatcgtttttgcaagccgaccaaagagtcaaggatctgagct |
30071134 |
T |
|
| Q |
221 |
cattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaa |
320 |
Q |
| |
|
||| || |||||||| |||||| | | ||||||||| ||||||||||||||||||||||| | |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
30071133 |
catgttatatggttccaaagggatagttttttctgactatggtccttattggcgtagtgtgaggaaattttgcactttgaaacttcttagtgcttcaaaa |
30071034 |
T |
|
| Q |
321 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
420 |
Q |
| |
|
|||||||||| |||||||||||| || |||||||| | |||||||||| | || |||||| || |||||| |||||||||||||||||||||||| |
|
|
| T |
30071033 |
gttgagatgtctggtcctattagaaaagaggagttgagtattttggttaacactttgaagaaagctgctttggttggtgaggttgtgaatgttagtgagg |
30070934 |
T |
|
| Q |
421 |
ttgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
520 |
Q |
| |
|
| || |||||||| || |||||||||||||||||| |||| || || || ||||||||||||||||||| || || || ||||||||| ||| | ||| |
|
|
| T |
30070933 |
tagtagagaatctaatagaagatattgtgtataagttgatgtttggacggagtaagtatgagcaatttgacttgaaaaatttggttcaacaagaattggt |
30070834 |
T |
|
| Q |
521 |
tatgcttggagcttttaat |
539 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
30070833 |
tttgattggagcttttaat |
30070815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 21 - 539
Target Start/End: Original strand, 29943678 - 29944196
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
||||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
29943678 |
ataatcggaaacctccacatattaggcacccttccacatagaacacttcaatcactctccaaacaatatggtccaatcatgtccttacaactaggtcaag |
29943777 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaagcatctcagct |
220 |
Q |
| |
|
| ||| | ||||| ||||||||||||||||| ||||| |||||| ||||||| ||||||||| ||| |||| || || | | || | | ||| | |
|
|
| T |
29943778 |
tcccagctattgtcatttcatcttcaaaagccgcagagtcattcgtcaaaacccatgacatcgttttcgcaaaccgaccggaacttgtaggagcacagat |
29943877 |
T |
|
| Q |
221 |
cattttttatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaa |
320 |
Q |
| |
|
||| | |||||||| ||||||||||| |||||| |||| | |||||||||||||||| | ||||| || |||| |||||||| |||||||| ||| |
|
|
| T |
29943878 |
catgtcttatggttgcaaagggttggcgttttctaagtacgactcttattggcgtagtgtgagaaaactttgtacttcaaaacttcttagtgcttcgaaa |
29943977 |
T |
|
| Q |
321 |
gttgagatgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgaga |
420 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||||||||||| || || ||||||| || | ||| |||||||||||||||||||||||| |
|
|
| T |
29943978 |
gttgagatgtttggtcctattaggaaggagaagttggatgttttggttaaatctttggagaaagctgctctggagggtgaggttgtgaatgttagtgagg |
29944077 |
T |
|
| Q |
421 |
ttgttgagaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggc |
520 |
Q |
| |
|
||| |||||| |||| || |||||||||||||||||| | |||||| || |||||||||| || |||| |||||| |||||||||||| | |||||| |
|
|
| T |
29944078 |
ctgtagagaatgttatagaggatattgtgtataagatggtgttgggtcggagtaagtatgatcatattgacctaaagaggttggttcaagacgtaatggc |
29944177 |
T |
|
| Q |
521 |
tatgcttggagcttttaat |
539 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
29944178 |
tttgattggagcttttaat |
29944196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 228 - 539
Target Start/End: Original strand, 29952006 - 29952317
Alignment:
| Q |
228 |
tatggttcgaaagggttggctttttctgagtatggtccttattggcgtagtgtaaagaaactgtgcactttgaaacttctaagtgcttcaaaagttgaga |
327 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||||||||||||||| | |||||| |||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
29952006 |
tatggttccaaagggttggctttttctaagtatggtccttattggcgtagtgtgaggaaactttgcactttaaaacttcttagtgcttcaaaagttgaga |
29952105 |
T |
|
| Q |
328 |
tgtttggtcctattaggaagaaggagttggatgttttggttaagtcattagagaaagttgttttggtaggtgaggttgtgaatgttagtgagattgttga |
427 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||||| |||||||||| ||||||| || |||||| ||||||||||||||||||||||| |||| || |
|
|
| T |
29952106 |
tgtttggttctattaggaaggaaaagttggatgttttgattaagtcattggagaaagctgctttggtgagtgaggttgtgaatgttagtgaggttgtaga |
29952205 |
T |
|
| Q |
428 |
gaatcttattgaagatattgtgtataagatgatattgggtaggggtaagtatgagcaatttgatttaaagaagttggttcaagaaggaatggctatgctt |
527 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| || | |||||||| |||||||| ||||||| | |||||||||| | | ||||| || || |
|
|
| T |
29952206 |
gaatcttattgaggatattgtgtataagatgatattgggtcggagcaagtatgatcaatttgacttaaagagggtggttcaagacgtattggctttggtt |
29952305 |
T |
|
| Q |
528 |
ggagcttttaat |
539 |
Q |
| |
|
|||||||||||| |
|
|
| T |
29952306 |
ggagcttttaat |
29952317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 29949346 - 29949535
Alignment:
| Q |
21 |
ataataggaaaccttcacatattaggcaaacttccacatagaacacttcaatcactgtccaaaaaatatggttcaatcatgtccttacaactaggtcaag |
120 |
Q |
| |
|
||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
29949346 |
ataattggaaaccttcacctattaggtaaacttccacatagaacacttcaatcactctccaaaaaatatggtccaatcatgtccttacaacttggtcaag |
29949445 |
T |
|
| Q |
121 |
ttccaacaattgttatttcatcttcaaaagcagcagaatcattcctcaaaactcatgacatcaattttgcaagtcggccaaagactcaag |
210 |
Q |
| |
|
||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||| |
|
|
| T |
29949446 |
ttccaacaattataatttcttcttcaaaagctgcagaatcattcctcaaaactcacgacatcaaatttgcaagccggccaaagattcaag |
29949535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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