View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16929_high_34 (Length: 278)

Name: NF16929_high_34
Description: NF16929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16929_high_34
NF16929_high_34
[»] chr8 (27 HSPs)
chr8 (10-140)||(24612563-24612691)
chr8 (10-136)||(27621084-27621208)
chr8 (10-140)||(27752536-27752664)
chr8 (10-136)||(32678592-32678716)
chr8 (10-140)||(35260007-35260135)
chr8 (10-140)||(37598020-37598148)
chr8 (10-140)||(44411292-44411420)
chr8 (10-140)||(11044007-11044135)
chr8 (10-136)||(39187187-39187311)
chr8 (10-139)||(44052571-44052699)
chr8 (10-134)||(3099908-3100031)
chr8 (10-139)||(37567514-37567641)
chr8 (10-137)||(35346387-35346512)
chr8 (10-140)||(25321669-25321797)
chr8 (10-119)||(31133112-31133219)
chr8 (10-137)||(33851106-33851231)
chr8 (10-140)||(35344316-35344445)
chr8 (10-137)||(44358574-44358699)
chr8 (10-135)||(11992682-11992806)
chr8 (10-136)||(36538012-36538136)
chr8 (10-107)||(34713511-34713606)
chr8 (17-139)||(12108121-12108240)
chr8 (56-135)||(40487794-40487870)
chr8 (19-100)||(41426329-41426408)
chr8 (19-117)||(2238685-2238781)
chr8 (19-120)||(24510787-24510886)
chr8 (10-63)||(40486575-40486628)
[»] chr4 (25 HSPs)
chr4 (10-139)||(1619974-1620101)
chr4 (10-139)||(53677527-53677654)
chr4 (10-137)||(3043215-3043340)
chr4 (10-136)||(32012375-32012499)
chr4 (10-140)||(50768389-50768517)
chr4 (10-139)||(43980443-43980570)
chr4 (10-133)||(39970037-39970158)
chr4 (10-140)||(30776532-30776660)
chr4 (10-140)||(30777431-30777559)
chr4 (10-140)||(37788395-37788523)
chr4 (10-136)||(49901975-49902099)
chr4 (10-140)||(55937751-55937879)
chr4 (10-139)||(38940814-38940941)
chr4 (10-133)||(10591551-10591672)
chr4 (10-137)||(38187774-38187899)
chr4 (10-136)||(29180460-29180584)
chr4 (10-140)||(29899659-29899787)
chr4 (10-140)||(52713007-52713135)
chr4 (10-122)||(47807157-47807267)
chr4 (10-137)||(9798123-9798248)
chr4 (13-137)||(51495099-51495218)
chr4 (23-140)||(27750409-27750524)
chr4 (19-136)||(5234059-5234174)
chr4 (12-137)||(30012004-30012126)
chr4 (42-140)||(5222373-5222474)
[»] chr3 (26 HSPs)
chr3 (10-139)||(23513516-23513643)
chr3 (10-139)||(26641156-26641283)
chr3 (10-140)||(1335058-1335186)
chr3 (10-139)||(53020131-53020259)
chr3 (10-135)||(55400691-55400814)
chr3 (10-137)||(46296121-46296246)
chr3 (10-121)||(49068018-49068127)
chr3 (10-140)||(31126160-31126288)
chr3 (10-140)||(46580484-46580612)
chr3 (10-140)||(28793109-28793238)
chr3 (10-133)||(32322283-32322404)
chr3 (10-137)||(45781348-45781473)
chr3 (13-115)||(52172057-52172157)
chr3 (10-140)||(21654192-21654321)
chr3 (10-120)||(51255154-51255262)
chr3 (10-140)||(16739204-16739327)
chr3 (10-120)||(52252004-52252112)
chr3 (10-115)||(37324128-37324231)
chr3 (10-115)||(51426592-51426695)
chr3 (10-137)||(43575909-43576033)
chr3 (20-140)||(13541225-13541343)
chr3 (32-137)||(46820000-46820103)
chr3 (10-69)||(45347757-45347816)
chr3 (10-60)||(34022625-34022675)
chr3 (12-140)||(36189052-36189179)
chr3 (12-120)||(34105500-34105611)
[»] chr7 (36 HSPs)
chr7 (10-140)||(35181138-35181266)
chr7 (10-136)||(23106403-23106527)
chr7 (10-140)||(48879334-48879462)
chr7 (10-133)||(45598857-45598978)
chr7 (10-136)||(3157386-3157510)
chr7 (10-139)||(22111370-22111497)
chr7 (10-139)||(40583092-40583219)
chr7 (10-137)||(41815733-41815858)
chr7 (10-140)||(43107945-43108074)
chr7 (10-136)||(19933095-19933219)
chr7 (10-136)||(19964234-19964358)
chr7 (10-140)||(21654161-21654289)
chr7 (10-140)||(34808165-34808293)
chr7 (10-136)||(36576368-36576492)
chr7 (10-139)||(47383353-47383480)
chr7 (10-137)||(23731509-23731634)
chr7 (10-133)||(40560335-40560456)
chr7 (10-137)||(41889120-41889245)
chr7 (10-120)||(18206359-18206467)
chr7 (10-139)||(32491147-32491273)
chr7 (10-137)||(48937929-48938055)
chr7 (10-137)||(48942955-48943081)
chr7 (10-140)||(44600392-44600520)
chr7 (10-122)||(42617635-42617745)
chr7 (10-115)||(41890282-41890385)
chr7 (10-96)||(7989348-7989432)
chr7 (12-112)||(33153013-33153111)
chr7 (10-59)||(9818493-9818542)
chr7 (10-59)||(10720418-10720467)
chr7 (12-120)||(30082319-30082425)
chr7 (12-122)||(35084143-35084251)
chr7 (30-140)||(39348735-39348843)
chr7 (19-120)||(29236117-29236215)
chr7 (76-115)||(9818450-9818489)
chr7 (76-115)||(10720375-10720414)
chr7 (30-139)||(39337474-39337584)
[»] chr1 (33 HSPs)
chr1 (10-140)||(44875126-44875254)
chr1 (10-137)||(15311128-15311252)
chr1 (10-137)||(40960559-40960684)
chr1 (12-140)||(29488695-29488821)
chr1 (10-137)||(38942526-38942651)
chr1 (10-140)||(25990695-25990823)
chr1 (10-136)||(28916600-28916724)
chr1 (10-140)||(46949268-46949396)
chr1 (10-137)||(28017608-28017733)
chr1 (10-137)||(35941791-35941916)
chr1 (10-137)||(40935698-40935823)
chr1 (10-140)||(15285751-15285878)
chr1 (10-140)||(18036491-18036619)
chr1 (10-140)||(23873912-23874040)
chr1 (20-140)||(26907184-26907302)
chr1 (10-137)||(31970394-31970519)
chr1 (10-133)||(40220011-40220131)
chr1 (10-133)||(47996908-47997029)
chr1 (10-140)||(9127990-9128118)
chr1 (10-139)||(45357961-45358088)
chr1 (10-122)||(43656122-43656232)
chr1 (10-137)||(4529137-4529262)
chr1 (10-137)||(49924369-49924494)
chr1 (10-140)||(39026331-39026459)
chr1 (10-122)||(18852188-18852298)
chr1 (10-120)||(18913430-18913539)
chr1 (10-140)||(35189147-35189276)
chr1 (10-139)||(26479687-26479814)
chr1 (10-133)||(6848391-6848513)
chr1 (211-265)||(15311017-15311071)
chr1 (10-75)||(35884221-35884286)
chr1 (12-119)||(44056385-44056490)
chr1 (12-137)||(36383878-36384001)
[»] chr5 (19 HSPs)
chr5 (10-136)||(12638842-12638966)
chr5 (10-140)||(31690702-31690830)
chr5 (10-139)||(20914809-20914936)
chr5 (10-140)||(35462800-35462928)
chr5 (10-140)||(8146095-8146223)
chr5 (10-140)||(8541646-8541774)
chr5 (10-140)||(13146678-13146806)
chr5 (10-137)||(31316883-31317008)
chr5 (10-136)||(16286165-16286289)
chr5 (10-140)||(30086630-30086758)
chr5 (10-136)||(25962530-25962658)
chr5 (10-115)||(42365009-42365112)
chr5 (10-139)||(24432482-24432609)
chr5 (10-133)||(17825280-17825399)
chr5 (10-122)||(37066305-37066415)
chr5 (12-137)||(8143886-8144009)
chr5 (12-120)||(2002217-2002323)
chr5 (12-137)||(24439524-24439647)
chr5 (51-133)||(20452545-20452625)
[»] chr2 (26 HSPs)
chr2 (10-140)||(21539704-21539832)
chr2 (10-133)||(4033756-4033877)
chr2 (10-140)||(792437-792565)
chr2 (10-140)||(33635283-33635411)
chr2 (10-140)||(5091621-5091751)
chr2 (10-137)||(38549724-38549849)
chr2 (10-140)||(8784342-8784470)
chr2 (10-140)||(29514100-29514228)
chr2 (10-139)||(43075698-43075825)
chr2 (22-140)||(28424221-28424337)
chr2 (10-140)||(29514556-29514684)
chr2 (10-136)||(14565454-14565579)
chr2 (10-139)||(4091958-4092086)
chr2 (10-139)||(10478125-10478253)
chr2 (10-140)||(28492467-28492595)
chr2 (10-120)||(43451472-43451580)
chr2 (10-133)||(35832366-35832487)
chr2 (10-136)||(44803850-44803973)
chr2 (37-136)||(22162271-22162368)
chr2 (12-139)||(9294603-9294728)
chr2 (59-140)||(15858740-15858819)
chr2 (12-87)||(18833993-18834066)
chr2 (12-100)||(15068722-15068808)
chr2 (13-120)||(13822854-13822959)
chr2 (10-57)||(10979197-10979244)
chr2 (80-140)||(10979138-10979198)
[»] chr6 (10 HSPs)
chr6 (10-139)||(33756204-33756331)
chr6 (10-140)||(10227859-10227987)
chr6 (10-140)||(17721891-17722019)
chr6 (10-136)||(30949086-30949210)
chr6 (10-137)||(12278656-12278781)
chr6 (10-140)||(374046-374174)
chr6 (10-140)||(17598240-17598368)
chr6 (10-137)||(30766396-30766521)
chr6 (10-140)||(31887203-31887332)
chr6 (30-121)||(3888396-3888484)
[»] scaffold0495 (1 HSPs)
scaffold0495 (10-140)||(4578-4705)


Alignment Details
Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 24612563 - 24612691
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  24612563 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgc--atttaattttacattgaaaaagatgatttgtttg 24612660  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  24612661 aaaaaacataataatagcataaaagttggtc 24612691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 27621208 - 27621084
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  27621208 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 27621111  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  ||||||||||||    
T  27621110 aaaaaacataataatagcataaaagtt 27621084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 27752664 - 27752536
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  27752664 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 27752567  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  27752566 aaaaaacataaaaatagcataaaagttggtc 27752536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 32678592 - 32678716
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  32678592 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 32678689  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  | ||||||||||    
T  32678690 aaaaaacataataataacataaaagtt 32678716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 35260135 - 35260007
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || ||||  |||||||||||||||| |||||||| ||||||||    
T  35260135 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatggaatttgc--atttaattttacattggaaaagatgatttgtttg 35260038  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  35260037 aaaaaacataataatagcataaaagttggtc 35260007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 37598148 - 37598020
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||| ||| ||||||||    
T  37598148 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaaaatgatttgtttg 37598051  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||||| || ||||||||||||||    
T  37598050 aaaaaacataataacaacataaaagttggtc 37598020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 44411292 - 44411420
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||  ||||||||||||||||||||||||| ||||||||    
T  44411292 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgc--atttaattttacattgaaaaagatgatttgtttg 44411389  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||| ||||||  ||||||||||||||||    
T  44411390 aaaaaatataataatagcataaaagttggtc 44411420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 11044135 - 11044007
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||  |||||||||||||||| |||| ||| ||| ||||    
T  11044135 ataattctcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgc--atttaattttacattggaaaatatgatttatttg 11044038  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  11044037 aaaaaacataataatagcataaaagttggtc 11044007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 39187311 - 39187187
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| ||| |||| ||||||||    
T  39187311 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaatgatgatttgtttg 39187214  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  ||||||||||||    
T  39187213 aaaaaacataataatagcataaaagtt 39187187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 44052699 - 44052571
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  44052699 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 44052602  T
Q  110 -aaaaaacataatatcagcataaaagttggt 139  Q
     |||||||||||||  | |||||||||||||    
T  44052601 aaaaaaacataataataacataaaagttggt 44052571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 3100031 - 3099908
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  3100031 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 3099934  T
Q  110 -aaaaaacataatatcagcataaaag 134  Q
     |||||||||||||  ||||||||||    
T  3099933 aaaaaaacataataatagcataaaag 3099908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 37567514 - 37567641
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||| ||||  |||||||||||||||| |||||||| ||||| ||    
T  37567514 ataattctcattgattaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtctg 37567611  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  |||||||||||||||    
T  37567612 aaaaaacataataatagcataaaagttggt 37567641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 35346387 - 35346512
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||  |||||||| |||| | ||||||||||| ||||||  | ||||||||||||||||||||| ||||||||    
T  35346387 ataattctcattggttaaaaattatggagataataaaaaggagaatacattgaatgcaatttgcat--tcaattttacattgaaaaagatgatttgtttg 35346484  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  35346485 aaaaaacataataatagcataaaagttg 35346512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 25321669 - 25321797
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||| ||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||  |||||||||||||| |||||||| ||||||||    
T  25321669 ataattttcataggttaaaaattatggagaaaataaaaaggagagcaaattaaatgcaacttgcat--ttaattttacattggaaaagatgatttgtttg 25321766  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  25321767 aaaaaacataaaaatagcataaaagttggtc 25321797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 31133112 - 31133219
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  31133112 ataattctcattggttaaaaattatggagaaaataaaaaggagaaaaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 31133209  T
Q  110 aaaaaacata 119  Q
    ||||||||||    
T  31133210 aaaaaacata 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 33851106 - 33851231
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| ||||||||| |||||||| |||||||| | |||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  33851106 ataattctcattagttaaaaatcatggagaaaataaaaaggaaaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 33851203  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||| |  |||||||||||||    
T  33851204 aaaaaacataaaaatagcataaaagttg 33851231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 35344445 - 35344316
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattg-aaaaagatgttttgttt 108  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| | ||||||||||| ||||  |||||||||||||||| ||||| ||| |||||||    
T  35344445 ataattctcattggttaaaaattatggagaaaataaaaaggagaatacattgaatgcaatttgc--atttaattttacattgaaaaaaaatgatttgttt 35344348  T
Q  109 gaaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||||||  ||||||||| ||||||    
T  35344347 gaaaaaacataataatagcataaaaattggtc 35344316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 44358574 - 44358699
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  44358574 ataattctcattaattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 44358671  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||| |||||  | |||||||||||    
T  44358672 aaaaaacgtaataataacataaaagttg 44358699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 11992806 - 11992682
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  11992806 ataattctcattggttaaaaattatggagaaaagaaaaaggtgaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 11992709  T
Q  110 -aaaaaacataatatcagcataaaagt 135  Q
     |||||||||||||  |||||||||||    
T  11992708 aaaaaaacataataatagcataaaagt 11992682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 36538136 - 36538012
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||||||||||| |||||||| |||||||| |||| ||||| ||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  36538136 ataattctcattggttaaaaatcatggagaaaataaaaaggagaataaattaaatgcaaattgc--atttaattttacattggaaaagatgatttgtttg 36538039  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    ||||||||||| |  ||||||||||||    
T  36538038 aaaaaacataaaaatagcataaaagtt 36538012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 34713606 - 34713511
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtt 107  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||    
T  34713606 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtt 34713511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 12108240 - 12108121
Alignment:
Q  17 tcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaac 116  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||  ||| ||||||||||||||||| ||| ||||||||||||||     
T  12108240 tcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgc--attgaattttacattgaaaaa-atgatttgtttgaaaaaat 12108144  T
Q  117 ataatatcagcataaaagttggt 139  Q
    ||||||   ||||||||||||||    
T  12108143 ataataatggcataaaagttggt 12108121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 40487794 - 40487870
Alignment:
Q  56 aaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataatatcagcataaaagt 135  Q
    ||||||||||||||||||||  | |||||||||||| |||||||| |||||||| ||||||||||||  |||| ||||||    
T  40487794 aaattgaatgcaacttgcat--tgaattttacattggaaaagatgatttgtttg-aaaaacataataatagcaaaaaagt 40487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 41426408 - 41426329
Alignment:
Q  19 attggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg 100  Q
    |||||||||  ||||||||||  ||| |||| | |||||||||||||||| ||||  |||||||||||| ||||||||||||    
T  41426408 attggttaatgattatggagataatagaaaggataacaaattgaatgcaatttgc--atttaattttactttgaaaaagatg 41426329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 2238685 - 2238781
Alignment:
Q  19 attggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaaca 117  Q
    ||||||||| ||| ||||||   ||| |||| |||||||||||||||| | ||||||  |||||||||| ||| |||||||| ||| ||||||| ||||    
T  2238685 attggttaataatcatggagtgaatagaaaggagaacaaattgaatgcgatttgcat--ttaattttactttggaaaagatgatttttttgaaataaca 2238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 24510787 - 24510886
Alignment:
Q  19 attggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacat 118  Q
    |||||||||  |||||||| |  |||||||| |||||||||||||||||| ||||  |||||||  ||| ||| |||| ||| ||| ||||||| |||||    
T  24510787 attggttaatgattatggatagaataaaaagtagaacaaattgaatgcaatttgc--atttaatactactttggaaaaaatgatttttttgaaataacat 24510884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 40486575 - 40486628
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaa 63  Q
    |||||| | ||| ||||||||||| |||||| ||||||||||||| ||||||||    
T  40486575 ataatttttattagttaaaaattaaggagaaaataaaaagaagaataaattgaa 40486628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 1620101 - 1619974
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||    
T  1620101 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaaattgc--atttaattttacattgaaaaagatgatttgtttg 1620004  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||| ||||||  |||||||||||||||    
T  1620003 aaaaaatataataatagcataaaagttggt 1619974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 53677527 - 53677654
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  53677527 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 53677624  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  |||||||||||||||    
T  53677625 aaaaaacataataatagcataaaagttggt 53677654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 3043215 - 3043340
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  3043215 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 3043312  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  3043313 aaaaaacataataatagcataaaagttg 3043340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 32012375 - 32012499
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||    
T  32012375 ataattctcattggttaaaaattatagagaaaataaaaaggagaataaattgaatgcaatttgcat--ttaattttacattgaaaaagatgatttgtttg 32012472  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  ||||||||||||    
T  32012473 aaaaaacataataatagcataaaagtt 32012499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 50768517 - 50768389
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  50768517 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 50768420  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  50768419 aaaaaacataaaaatagcataaaagttggtc 50768389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 43980570 - 43980443
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  43980570 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 43980473  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||| ||||||  |||||||||||||||    
T  43980472 aaaaaatataataatagcataaaagttggt 43980443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 39970037 - 39970158
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| |||| |||    
T  39970037 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttggttg 39970134  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||||||||||  |||||||||    
T  39970135 aaaaaacataataatagcataaaa 39970158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 30776532 - 30776660
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||  ||| ||||    
T  30776532 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagataatttctttg 30776629  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  30776630 aaaaaacataataataacataaaagttggtc 30776660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 30777559 - 30777431
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||  ||| ||||    
T  30777559 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagataatttctttg 30777462  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  30777461 aaaaaacataataataacataaaagttggtc 30777431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 37788523 - 37788395
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  37788523 ataattctcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaagttgc--atttaattttacattggaaaagatgatttgtttg 37788426  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  37788425 aaaaaacataaaaatagcataaaagttggtc 37788395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 49902099 - 49901975
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||||| |||| |||||||| ||||||||    
T  49902099 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttatattggaaaagatgatttgtttg 49902002  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  | ||||||||||    
T  49902001 aaaaaacataataataacataaaagtt 49901975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 55937751 - 55937879
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||  |||||||||||||||| |||||||| ||||||||    
T  55937751 ataattctcattggttaaaaattatggagaagataaaaaggagaacaaattaaatacaacttgc--atttaattttacattggaaaagatgatttgtttg 55937848  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  | ||||||||||||||    
T  55937849 aaaaaacataaaaatatcataaaagttggtc 55937879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 38940941 - 38940814
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||| ||||||||| |||| || ||||||||||||| ||||||||||||| ||||||  |||||||||||||| |||||||| ||||||||    
T  38940941 ataattctcattgattaaaaattttggaaaaaataaaaagaagaataaattgaatgcaatttgcat--ttaattttacattggaaaagatgatttgtttg 38940844  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  |||||||||||||||    
T  38940843 aaaaaacataataatagcataaaagttggt 38940814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 10591551 - 10591672
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  10591551 ataattctcattggttaaaaattatggaaaaaataaaaaggagaaccaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 10591648  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||||||||||  |||||||||    
T  10591649 aaaaaacataataatagcataaaa 10591672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 38187774 - 38187899
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| |||||||  |||||||||||||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  38187774 ataattctcatttgttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 38187871  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||| ||||| ||  |||||||||||||    
T  38187872 aaaatacatactaatagcataaaagttg 38187899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 29180460 - 29180584
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||  ||| ||||    
T  29180460 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagataatttctttg 29180557  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  | ||||||||||    
T  29180558 aaaaaacataataataacataaaagtt 29180584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 29899787 - 29899659
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||||||||||| ||| |||| ||||||||  ||||||||| ||||||||||||||  |||||||||||||| |||||||| ||||||||    
T  29899787 ataattctcattggttaaaaatcatgaagaaaataaaaaggtgaacaaattaaatgcaacttgcat--ttaattttacattggaaaagatgatttgtttg 29899690  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  29899689 aaaaaacataaaaatagcataaaagttggtc 29899659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 52713135 - 52713007
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||| ||||||| |||||||||||||| |||||||| |||||||||| ||||||| ||||||  |||||||||||||| |||||||| ||||||||    
T  52713135 ataattcttattggttgaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcat--ttaattttacattggaaaagatgatttgtttg 52713038  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||| ||||||    
T  52713037 aaaaaacataataatagcataaaaattggtc 52713007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 47807267 - 47807157
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||| ||||    
T  47807267 ataattctcgttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttctttg 47807170  T
Q  110 aaaaaacataata 122  Q
    |||||||||||||    
T  47807169 aaaaaacataata 47807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 9798123 - 9798248
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||| ||| ||||||||||||| |||||||| |||||| ||||||| ||| ||||||  |||||||||||||| |||||||| ||||||||    
T  9798123 ataattctcattgattacaaattatggagaaaataaaaaggagaacacattgaatccaatttgcat--ttaattttacattggaaaagatgatttgtttg 9798220  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  9798221 aaaaaacataataatagcataaaagttg 9798248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 51495218 - 51495099
Alignment:
Q  13 attctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaa 112  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||  |||||||||||||||| |||||||| ||||||| |||    
T  51495218 attctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttaaaa 51495121  T
Q  113 aaacataatatcagcataaaagttg 137  Q
    |||||||||   |||||||||||||    
T  51495120 aaacataat---agcataaaagttg 51495099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 27750409 - 27750524
Alignment:
Q  23 gttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataata 122  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||||| ||||||| |    
T  27750409 gttaaaaattatggaaaaaataaaaagaagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttgaaataacataaaa 27750506  T
Q  123 tcagcataaaagttggtc 140  Q
      ||||||||||||||||    
T  27750507 atagcataaaagttggtc 27750524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 5234059 - 5234174
Alignment:
Q  19 attggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagat-gttttgtttgaaaaaaca 117  Q
    |||||||||  ||||||||||| |||||||| |||| ||||||||||||| ||  | |||||||||||  || ||||||||  |||| ||||||||||||    
T  5234059 attggttaattattatggagaaaataaaaaggagaataaattgaatgcaattt--acatttaatttta-ttttaaaaagataattttttttgaaaaaaca 5234155  T
Q  118 taatatcagcataaaagtt 136  Q
    |||||  ||||||||||||    
T  5234156 taataatagcataaaagtt 5234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 30012004 - 30012126
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg--ttttgtttg 109  Q
    |||| |||||||||||  ||||||||||| |||||||  |||||||||||||||||| ||||  |||||||||||| |||  |||||||  |||| |||     
T  30012004 aattatcattggttaattattatggagaaaataaaaa--agaacaaattgaatgcaatttgc--atttaattttactttg-gaaagatgatttttttttt 30012098  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  || ||||||||||    
T  30012099 aaaaaacataataatagaataaaagttg 30012126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 5222373 - 5222474
Alignment:
Q  42 ataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg-----ttttgtttgaaaaaacataatatcagcataaaagtt 136  Q
    |||||||| |||||||||| ||||||| ||||||  |||||||||| ||| |||| |||     |||| ||| |||||||||||||  || |||||||||    
T  5222373 ataaaaaggagaacaaattcaatgcaatttgcat--ttaattttactttggaaaaaatgattttttttttttaaaaaaacataataatagtataaaagtt 5222470  T
Q  137 ggtc 140  Q
    ||||    
T  5222471 ggtc 5222474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 23513643 - 23513516
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  23513643 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcat--ttaattttacattgaaaaagatgttttgtttg 23513546  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  |||||||||||||||    
T  23513545 aaaaaacataataatagcataaaagttggt 23513516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 26641156 - 26641283
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||| |||||||||||| ||||||||    
T  26641156 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttaccttgaaaaagatgatttgtttg 26641253  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  |||||||||||||||    
T  26641254 aaaaaacataataatagcataaaagttggt 26641283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 1335186 - 1335058
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||    
T  1335186 ataatttttattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgc--atttaattttacattgaaaaagatgatttgtttg 1335089  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||| ||||||    
T  1335088 aaaaaacataataataacataaaaattggtc 1335058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 53020259 - 53020131
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||    
T  53020259 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattgaaaaagatgatttgtttg 53020162  T
Q  110 -aaaaaacataatatcagcataaaagttggt 139  Q
     |||||||||||||  |||||||||||||||    
T  53020161 aaaaaaacataataatagcataaaagttggt 53020131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 55400814 - 55400691
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  55400814 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 55400717  T
Q  110 aaaaaacataatatcagcataaaagt 135  Q
    |||||||||||||  |||||||||||    
T  55400716 aaaaaacataataatagcataaaagt 55400691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 46296121 - 46296246
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||| | |||||||| ||||||||    
T  46296121 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacatcggaaaagatgatttgtttg 46296218  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||| |  |||||||||||||    
T  46296219 aaaaaacataaaaatagcataaaagttg 46296246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 49068127 - 49068018
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||  ||||||||||||||||||||||||| ||||||||    
T  49068127 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgc--atttaattttacattgaaaaagatgatttgtttg 49068030  T
Q  110 aaaaaacataat 121  Q
    ||||||||||||    
T  49068029 aaaaaacataat 49068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 31126288 - 31126160
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||| ||| ||||||||    
T  31126288 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaaaatgatttgtttg 31126191  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||   |||||||||||||||    
T  31126190 aaaaaacataataatggcataaaagttggtc 31126160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 46580612 - 46580484
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||| ||| ||||||||    
T  46580612 ataattctcattgattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattgtaaaatatgatttgtttg 46580515  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||   |||||||||||||||    
T  46580514 aaaaaacataataatggcataaaagttggtc 46580484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 28793238 - 28793109
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||| || | |||||||||  |||||||| ||||||||    
T  28793238 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcat-ttaatttttacattagaaaagatgatttgtttg 28793140  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  28793139 aaaaaacataaaaatagcataaaagttggtc 28793109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 32322283 - 32322404
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||  |||||||||||||||||||||||||  ||||||||    
T  32322283 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttg--tatttaattttacattgaaaaagataatttgtttg 32322380  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    ||||||||||| |  |||||||||    
T  32322381 aaaaaacataaaaatagcataaaa 32322404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 45781473 - 45781348
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||   |||||||||||||||| |||||||| ||||||||    
T  45781473 ataattctcattggttaaaaattatggagaagataaaaatgagaacaaattaaatgcaacttg--aatttaattttacattggaaaagatgatttgtttg 45781376  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||| |  |||||||||||||    
T  45781375 aaaaaacataaaaatagcataaaagttg 45781348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 52172057 - 52172157
Alignment:
Q  13 attctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaa 112  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  52172057 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattgaaaaagatgatttgtttgaaa 52172154  T
Q  113 aaa 115  Q
    |||    
T  52172155 aaa 52172157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 21654321 - 21654192
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  21654321 ataattttcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 21654224  T
Q  110 -aaaaaacataatatcagcataaaagttggtc 140  Q
     |||||||||||||  | ||||||||||||||    
T  21654223 aaaaaaacataataataacataaaagttggtc 21654192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 51255262 - 51255154
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||| ||||||||||||  ||||||||||| |||| |||||||| ||||||||    
T  51255262 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttagattggaaaagatgatttgtttg 51255165  T
Q  110 aaaaaacataa 120  Q
    |||||||||||    
T  51255164 aaaaaacataa 51255154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 16739204 - 16739327
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||       |||||||||||||||| |||||||| ||||||||    
T  16739204 ataattctcattggttaaaaattatggagaaaataaaaaggaaaacaaattaaatgcaa-------atttaattttacattggaaaagatgatttgtttg 16739296  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||| ||||||  ||||||||||||||||    
T  16739297 aaaaaatataataatagcataaaagttggtc 16739327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 52252112 - 52252004
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||| ||||||||||||||||| |||||||  |||||||||| |||| |||||||  |||||||||||||||| |||||||| ||||||||    
T  52252112 ataattctcattgattaaaaattatggagaaaataaaaaagagaacaaattaaatgtaacttgc--atttaattttacattggaaaagatgatttgtttg 52252015  T
Q  110 aaaaaacataa 120  Q
    |||||||||||    
T  52252014 aaaaaacataa 52252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 37324128 - 37324231
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  37324128 ataattctcattggttaaaaattatggagaaaataaaaagggaaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 37324225  T
Q  110 aaaaaa 115  Q
    ||||||    
T  37324226 aaaaaa 37324231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 51426695 - 51426592
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||  |||||||||||||||  |||||||| ||||||||    
T  51426695 ataattttcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgc--atttaattttacattagaaaagatgatttgtttg 51426598  T
Q  110 aaaaaa 115  Q
    ||||||    
T  51426597 aaaaaa 51426592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 43576033 - 43575909
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||  |||||||||||||||  |||||||| ||||||||    
T  43576033 ataattatcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgc--atttaattttacattagaaaagatgatttgtttg 43575936  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
     |||||||||| |  |||||||||||||    
T  43575935 -aaaaacataaaaatagcataaaagttg 43575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 13541343 - 13541225
Alignment:
Q  20 ttggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacata 119  Q
    ||||||||||||||| ||||| |||||||| | |||| ||||||||||| ||||||  |||||||||||||| |||||||| |||||| |||||||||||    
T  13541343 ttggttaaaaattatagagaaaataaaaaggaaaacacattgaatgcaatttgcat--ttaattttacattggaaaagatgatttgttcgaaaaaacata 13541246  T
Q  120 atatcagcataaaagttggtc 140  Q
    |||  | ||||||||||||||    
T  13541245 ataataacataaaagttggtc 13541225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 46820103 - 46820000
Alignment:
Q  32 tatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataatatcagcataa 131  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||  |||||||||||||| |||||||| ||||||| ||||||||||| |  |||||||    
T  46820103 tatggagaaaataaaaaggagaacaaattaaatgcaacttgcat--ttaattttacattggaaaagatgatttgtttaaaaaaacataaaaatagcataa 46820006  T
Q  132 aagttg 137  Q
    ||||||    
T  46820005 aagttg 46820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 45347757 - 45347816
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaac 69  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  45347757 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaac 45347816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 34022675 - 34022625
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaatt 60  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  34022675 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaatt 34022625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 36189052 - 36189179
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg-ttttgtttga 110  Q
    ||||||||||||||||  ||| || | || ||||||||  ||||||||||||||||| ||||  |||||||||||| ||| |||||| | |||| | |||    
T  36189052 aattctcattggttaatgattgtgaataaaataaaaaggtgaacaaattgaatgcaatttgc--atttaattttactttggaaaagaagattttttgtga 36189149  T
Q  111 aaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||||  | |||||||| |||||    
T  36189150 aaaaacataataataacataaaagatggtc 36189179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 34105611 - 34105500
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcat---atttaattttacattgaaaaagatgttttgttt 108  Q
    |||||| |||||||||  |||||| |||  ||| |||| |||||||||| ||||||| || |||   |||||||||||| ||  |||||||| ||| |||    
T  34105611 aattcttattggttaatgattatgaagagaatagaaagcagaacaaattcaatgcaatttacatttaatttaattttacttttgaaaagatgattttttt 34105512  T
Q  109 gaaaaaacataa 120  Q
    |||| |||||||    
T  34105511 gaaataacataa 34105500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 35181266 - 35181138
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||    
T  35181266 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcat--ttaattttacattgaaaaagatgatttgtttg 35181169  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  35181168 aaaaaacataataatagcataaaagttggtc 35181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 23106527 - 23106403
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  23106527 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 23106430  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  ||||||||||||    
T  23106429 aaaaaacataataatagcataaaagtt 23106403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 48879462 - 48879334
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||| ||||    
T  48879462 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattgaaaaagatgatttttttg 48879365  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  48879364 aaaaaacataataataacataaaagttggtc 48879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 45598978 - 45598857
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  45598978 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 45598881  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||||||||||  |||||||||    
T  45598880 aaaaaacataataatagcataaaa 45598857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 3157510 - 3157386
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  3157510 ataattctcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 3157413  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||| ||||||||  ||||||||||||    
T  3157412 aaaatacataataatagcataaaagtt 3157386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 22111370 - 22111497
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||  ||||||||||||||||||||| ||| ||||||||    
T  22111370 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgc--atttaattttacattgaaaaatatgatttgtttg 22111467  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  | |||||||||||||    
T  22111468 aaaaaacataataataacataaaagttggt 22111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 40583219 - 40583092
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||  ||||||||||||||||||||| ||| ||||||||    
T  40583219 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgc--atttaattttacattgaaaaatatgatttgtttg 40583122  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  | |||||||||||||    
T  40583121 aaaaaacataataataacataaaagttggt 40583092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 41815733 - 41815858
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||  | |||||||||||||||| |||| ||| ||| ||||    
T  41815733 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaactt--acatttaattttacattggaaaatatgatttatttg 41815830  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  41815831 aaaaaacataataatagcataaaagttg 41815858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 43107945 - 43108074
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  43107945 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 43108042  T
Q  110 -aaaaaacataatatcagcataaaagttggtc 140  Q
     |||||||||||||  | ||||||||||||||    
T  43108043 aaaaaaacataataataacataaaagttggtc 43108074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 19933095 - 19933219
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  19933095 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 19933192  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    ||||||||||| |  ||||||||||||    
T  19933193 aaaaaacataaaaatagcataaaagtt 19933219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 19964234 - 19964358
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  19964234 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 19964331  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    ||||||||||| |  ||||||||||||    
T  19964332 aaaaaacataaaaatagcataaaagtt 19964358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 21654161 - 21654289
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| || ||||  |||||||||||||||| ||||| || ||||||||    
T  21654161 ataattctcattggttaaaaattatggagaaaatgaaaaggagaacaaattgaatgtaatttgc--atttaattttacattggaaaaggtgatttgtttg 21654258  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  21654259 aaaaaacataataatagcataaaagttggtc 21654289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 34808293 - 34808165
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||  |||||||||||| |||||||||||| ||||||||    
T  34808293 ataattcttattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgc--atttaattttacgttgaaaaagatgatttgtttg 34808196  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  34808195 aaaaaacataataataacataaaagttggtc 34808165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 36576492 - 36576368
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||  |||||||||||||||| |||||||| ||| ||||    
T  36576492 ataattttcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgc--atttaattttacattggaaaagatgatttatttg 36576395  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  ||||||||||||    
T  36576394 aaaaaacataataatagcataaaagtt 36576368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 47383480 - 47383353
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||  | |||||||||||||||| |||||||| ||||||||    
T  47383480 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaattt--acatttaattttacattggaaaagatgatttgtttg 47383383  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  | |||||||||||||    
T  47383382 aaaaaacataataatatcataaaagttggt 47383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 23731634 - 23731509
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||| ||| ||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  23731634 ataattctcgttgattaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 23731537  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||| |  |||||||||||||    
T  23731536 aaaaaacataaaaatagcataaaagttg 23731509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 40560456 - 40560335
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  40560456 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 40560359  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    ||||||||||| |  |||||||||    
T  40560358 aaaaaacataaaaatagcataaaa 40560335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 41889245 - 41889120
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||   || |||||||||||| |||||||| ||||||||    
T  41889245 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--tttgaattttacattggaaaagatgatttgtttg 41889148  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||   ||||||||||||    
T  41889147 aaaaaacataataatggcataaaagttg 41889120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 18206359 - 18206467
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||| ||| ||||||||  ||||||||||||||||||||||||| ||||||||    
T  18206359 ataattctcattggttaaaaattatggaaaaaataaaaaggagaacaaattaaatacaacttgc--atttaattttacattgaaaaagatgatttgtttg 18206456  T
Q  110 aaaaaacataa 120  Q
    |||||||||||    
T  18206457 aaaaaacataa 18206467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 32491147 - 32491273
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||  |||||||||||||||  |||||||| ||||||||    
T  32491147 ataattttcattggttaaaaattatggagaaaacaaaaaggagaacaaattaaatgcaacttgc--atttaattttacattcgaaaagatgatttgtttg 32491244  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    ||||||||||| || |||||||||||||||    
T  32491245 aaaaaacataaaat-agcataaaagttggt 32491273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 48937929 - 48938055
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| |||  ||||||||||||||||| |||||||| ||||||||    
T  48937929 ataattcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttg--tatttaattttacattggaaaagatgatttgtttg 48938026  T
Q  110 -aaaaaacataatatcagcataaaagttg 137  Q
     |||||||||||||  |||| ||||||||    
T  48938027 aaaaaaacataataatagcacaaaagttg 48938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 48942955 - 48943081
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| |||  ||||||||||||||||| |||||||| ||||||||    
T  48942955 ataattcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttg--tatttaattttacattggaaaagatgatttgtttg 48943052  T
Q  110 -aaaaaacataatatcagcataaaagttg 137  Q
     |||||||||||||  |||| ||||||||    
T  48943053 aaaaaaacataataatagcacaaaagttg 48943081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 44600520 - 44600392
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| | |||||  |||||||||||||||||||||||  ||||||||||||| || |||||||| ||| ||||    
T  44600520 ataattttcattggttaaaaattatggagaaaacaaaaaagagaacaaattgaatgcaacttgc--atttaattttacactggaaaagatgatttatttg 44600423  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  44600422 aaaaaacataataataacataaaagttggtc 44600392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 42617745 - 42617635
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||||||||||||| ||  ||||||||    
T  42617745 ataattctaattggttaaaaattatggagaaaataaaaaggagcacaaattgaatgcaatttgc--atttaattttacattgaaaaaaataatttgtttg 42617648  T
Q  110 aaaaaacataata 122  Q
    |||||||||||||    
T  42617647 aaaaaacataata 42617635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 41890282 - 41890385
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| || ||||  ||||||||||||||| ||||||||| ||||||||    
T  41890282 ataattctcattaattaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgc--atttaattttacattaaaaaagatgatttgtttg 41890379  T
Q  110 aaaaaa 115  Q
    ||||||    
T  41890380 aaaaaa 41890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7989348 - 7989432
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaa 96  Q
    |||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  7989348 ataattctcattggttaaaaattatgaagaaaataaaaaggataacaaattgaatgcaacttgc--atttaattttacattgaaaaa 7989432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 33153111 - 33153013
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    |||||| |||||||||  ||||||||||| ||| |||| |||||||||||||||||| ||||  |||||||||||| |||||||||||  ||| ||||||    
T  33153111 aattcttattggttaatgattatggagaaaatagaaaggagaacaaattgaatgcaatttgc--atttaattttactttgaaaaagataatttttttgaa 33153014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 9818542 - 9818493
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaat 59  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  9818542 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaat 9818493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 10720467 - 10720418
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaat 59  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  10720467 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaat 10720418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 30082425 - 30082319
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    |||||| |||||||||  ||||||||||  ||| |||  |||| ||||||||||||| ||||||  |||||||||| ||| |||||||| ||| ||||||    
T  30082425 aattcttattggttaatgattatggagagaatagaaaagagaataaattgaatgcaatttgcat--ttaattttactttggaaaagatgatttttttgaa 30082328  T
Q  112 aaaacataa 120  Q
    | |||||||    
T  30082327 ataacataa 30082319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 35084143 - 35084251
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    |||||| ||||| |||  ||||||||||| || ||||| |||||||||| ||||||| ||||  |||||||||||| ||| ||| |||| ||| | ||||    
T  35084143 aattcttattggataatgattatggagaaaatgaaaaggagaacaaattcaatgcaatttgc--atttaattttactttggaaaggatgatttttatgaa 35084240  T
Q  112 aaaacataata 122  Q
     ||||||||||    
T  35084241 gaaacataata 35084251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 39348843 - 39348735
Alignment:
Q  30 attatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataatatcagcat 129  Q
    ||||| ||||| ||| |||| |||||||||||||| ||| ||||||  |||||||||| ||| |||||||   || ||||||| |||| ||||  |||||    
T  39348843 attatcgagaaaatagaaaggagaacaaattgaatacaatttgcat--ttaattttactttggaaaagattaattttttgaaacaacacaataatagcat 39348746  T
Q  130 aaaagttggtc 140  Q
    |||||||||||    
T  39348745 aaaagttggtc 39348735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 29236117 - 29236215
Alignment:
Q  19 attggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacat 118  Q
    |||||||||  ||||||||||  |||||||| |||| ||||||||||||| ||  |||||||||||||| | | |||||||| ||| ||||||| |||||    
T  29236117 attggttaatgattatggagagaataaaaaggagaa-aaattgaatgcaattt--atatttaattttacttcgtaaaagatgatttttttgaaataacat 29236213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 9818489 - 9818450
Alignment:
Q  76 atttaattttacattgaaaaagatgttttgtttgaaaaaa 115  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  9818489 atttaattttacattggaaaagatgatttgtttgaaaaaa 9818450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 10720414 - 10720375
Alignment:
Q  76 atttaattttacattgaaaaagatgttttgtttgaaaaaa 115  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  10720414 atttaattttacattggaaaagatgatttgtttgaaaaaa 10720375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 39337584 - 39337474
Alignment:
Q  30 attatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg---ttttgtttgaaaaaacataatatcag 126  Q
    ||||||||||| ||| |||| ||||||| |||||||||| ||||  ||||| |||||  ||| ||||||||   |||| ||||||| |||| ||||  ||    
T  39337584 attatggagaaaatagaaaggagaacaatttgaatgcaatttgc--atttagttttaatttggaaaagatgattttttttttgaaacaacacaataatag 39337487  T
Q  127 cataaaagttggt 139  Q
    |||||||||||||    
T  39337486 cataaaagttggt 39337474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 44875254 - 44875126
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  44875254 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 44875157  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  44875156 aaaaaacataataatagcataaaagttggtc 44875126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 15311252 - 15311128
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||    
T  15311252 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatacaact-gcat--ttaattttacattgaaaaagatgttttgtttg 15311156  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||||| ||||||||||||||    
T  15311155 aaaaaacataataacagcataaaagttg 15311128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 40960559 - 40960684
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  40960559 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattgaaaaagatgatttgtttg 40960656  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||| |  |||||||||||||    
T  40960657 aaaaaacataaaaatagcataaaagttg 40960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 29488821 - 29488695
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||| |||| ||  ||||||||||    
T  29488821 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgc--atttaattttacattggaaaatattatttgtttgaa 29488724  T
Q  112 aaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||  ||||||||||||||||    
T  29488723 aaaacataataatagcataaaagttggtc 29488695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 38942526 - 38942651
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||| |||| ||| ||||||||    
T  38942526 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgc--atttaattttacattggaaaaaatgatttgtttg 38942623  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  38942624 aaaaaacataataatagcataaaagttg 38942651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 25990823 - 25990695
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  25990823 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 25990726  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||| ||||||    
T  25990725 aaaaaacataataatagcataaaaattggtc 25990695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 28916600 - 28916724
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||| |||| |||||||| ||||||||    
T  28916600 ataattttcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgc--atttaattttatattggaaaagatgatttgtttg 28916697  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  ||||||||||||    
T  28916698 aaaaaacataataatagcataaaagtt 28916724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 46949396 - 46949268
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||  ||||||||||||||||||||||| ||||||||    
T  46949396 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcat--ttaattttacattgaaaaagatgatttgtttg 46949299  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  46949298 aaaaaacataataataacataaaagttggtc 46949268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 28017733 - 28017608
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||  |||||||||||||| |||||||| ||||||||    
T  28017733 ataattatcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcat--ttaattttacattggaaaagatgatttgtttg 28017636  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  28017635 aaaaaacataataatagcataaaagttg 28017608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 35941916 - 35941791
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||| ||||||||||||||||| |||||||  |||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  35941916 ataattttcattgattaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttg--tatttaattttacattgaaaaagatgatttgtttg 35941819  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  35941818 aaaaaacataataatagcataaaagttg 35941791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 40935698 - 40935823
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  40935698 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 40935795  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    || |||||||| |  |||||||||||||    
T  40935796 aagaaacataaaaatagcataaaagttg 40935823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 15285878 - 15285751
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||    
T  15285878 ataattctcattggttaaaaattatggagaaaaaaaaaaga-gaacaaattgaatgcaatttgcat--ttaattttacattgaaaaagatgatttgtttg 15285782  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||   |||||||| ||||||    
T  15285781 aaaaaacataataatggcataaaaattggtc 15285751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 18036619 - 18036491
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||| ||||  |||||||||||| ||| |||||||| ||||||||    
T  18036619 ataattctcattggttaaaaattatgaagaaaataaaaaggagaataaattgaatgcaatttgc--atttaattttactttggaaaagatgatttgtttg 18036522  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  18036521 aaaaaacataataatagcataaaagttggtc 18036491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 23873912 - 23874040
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||  |||||||||| ||||||| ||||||  |||||||||||||| |||||||| ||||||||    
T  23873912 ataattttcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaatttgcat--ttaattttacattggaaaagatgatttgtttg 23874009  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  23874010 aaaaaacataataatagcataaaagttggtc 23874040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 26907184 - 26907302
Alignment:
Q  20 ttggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacata 119  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||  ||||||||||||||||||||||  ||||||||||||||||||    
T  26907184 ttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcat--ttaattttacattgaaaaagataatttgtttgaaaaaacata 26907281  T
Q  120 atatcagcataaaagttggtc 140  Q
    |||  ||||||||||||||||    
T  26907282 ataatagcataaaagttggtc 26907302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 31970394 - 31970519
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  31970394 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 31970491  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||| |||||| |  | |||||||||||    
T  31970492 aaaagacataaaaataacataaaagttg 31970519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 40220131 - 40220011
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||  ||||||||    
T  40220131 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagat-atttgtttg 40220035  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||||||||||  |||||||||    
T  40220034 aaaaaacataataatagcataaaa 40220011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 47997029 - 47996908
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||| |||  ||||||||||||||||| |||||||| ||||||||    
T  47997029 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttg--tatttaattttacattggaaaagatgatttgtttg 47996932  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||||||||||  |||||||||    
T  47996931 aaaaaacataataatagcataaaa 47996908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 9128118 - 9127990
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||   || ||||||||||||| || |||  ||||||||||||||||||||||| ||||||||    
T  9128118 ataattctcattggttaaaaattatggagaaaataaaaaggtaaataaattgaatgcaatttacat--ttaattttacattgaaaaagatgatttgtttg 9128021  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||| ||||||  ||||||||||||||||    
T  9128020 aaaaaatataataatagcataaaagttggtc 9127990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 45357961 - 45358088
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||| ||  ||||||||||||||||| |||||||| ||||||||    
T  45357961 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacaaattaaatgcaacatg--tatttaattttacattggaaaagatgatttgtttg 45358058  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    ||| ||||||| |  |||||||||||||||    
T  45358059 aaataacataaaaatagcataaaagttggt 45358088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 43656122 - 43656232
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  43656122 ataattttcattggttaaaaattatgaagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 43656219  T
Q  110 aaaaaacataata 122  Q
    |||||||||||||    
T  43656220 aaaaaacataata 43656232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 4529262 - 4529137
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||| ||||  |||||||||||||||| |||| ||| ||| ||||    
T  4529262 ataattctcatctgttaaaaattatggagaaaacaaaaagaagaacaaattgaatgcaatttgc--atttaattttacattggaaaaaatgatttatttg 4529165  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  4529164 aaaaaacataataatagcataaaagttg 4529137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 49924494 - 49924369
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||||||||||| ||| |||| |||||||| |||||||||| |||| |||||||||  |||||||||||||| |||||||| ||||||||    
T  49924494 ataattctcattggttaaaaatcatgaagaaaataaaaaggagaacaaattaaatgtaacttgcat--ttaattttacattggaaaagatgatttgtttg 49924397  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||| |  |||||||||||||    
T  49924396 aaaaaacataaaaatagcataaaagttg 49924369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 39026331 - 39026459
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||| |||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||  |||||||||||||||| |||| ||| ||| ||||    
T  39026331 ataattcttattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgc--atttaattttacattggaaaatatgatttatttg 39026428  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  39026429 aaaaaacataaaaatagcataaaagttggtc 39026459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 18852298 - 18852188
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||  |||||||||||||||| |||| ||  ||||||||    
T  18852298 ataattctcattggttaaaaattatggagaaaataaaaaggggaacaaattgaatgcaatttgc--atttaattttacattggaaaaaataatttgtttg 18852201  T
Q  110 aaaaaacataata 122  Q
    |||||||||||||    
T  18852200 aaaaaacataata 18852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 18913430 - 18913539
Alignment:
Q  10 ataattctca-ttggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgttt 108  Q
    |||||||||| || ||||||||| |||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||| |||||||    
T  18913430 ataattctcaattagttaaaaatcatggagaacataaaaagaagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgttt 18913527  T
Q  109 gaaaaaacataa 120  Q
    ||||||||||||    
T  18913528 gaaaaaacataa 18913539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 35189276 - 35189147
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| ||||| || |||||| ||||||||||| |||  || ||||||||||||||||||||||  ||||||||    
T  35189276 ataattttcattggttaaaaattatggagaaaataaagaggagaacacattgaatgcaatttg--tagttaattttacattgaaaaagattatttgtttg 35189179  T
Q  110 -aaaaaacataatatcagcataaaagttggtc 140  Q
     |||||||||||||  | ||||||||||||||    
T  35189178 aaaaaaacataataataccataaaagttggtc 35189147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 26479814 - 26479687
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||| ||| ||||| |||||||| |||||| ||||||||||| || |  ||| |||||||||||| |||||||| ||||||||    
T  26479814 ataattctcattggttaaaaactatagagaaaataaaaaggagaacatattgaatgcaattttc--attgaattttacattggaaaagatgatttgtttg 26479717  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||| ||||||   ||||||||||||||    
T  26479716 aaaaaatataataatggcataaaagttggt 26479687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 6848391 - 6848513
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||  ||||||||||| ||||  ||||||||||| |||| |||||||| |||||| |    
T  6848391 ataattctcattggttaaaaattatggagaaaataaaaaggataacgcattgaatgcaatttgc--atttaattttagattggaaaagatgatttgttag 6848488  T
Q  110 -aaaaaacataatatcagcataaaa 133  Q
     |||||||||||||  |||||||||    
T  6848489 aaaaaaacataataatagcataaaa 6848513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 15311071 - 15311017
Alignment:
Q  211 taaaaaacacacacaaataatgaaacaaccattcatatggatcatgaatgaggtg 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15311071 taaaaaacacacacaaataatgaaacaaccattcatatggatcatgaatgaggtg 15311017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 35884286 - 35884221
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcat 75  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||| ||| ||||||| ||||||    
T  35884286 ataattttcattggttaaaaattatagagaaaataaaaagaagaacacatttaatgcaatttgcat 35884221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 44056385 - 44056490
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    ||||||||||||||||  ||||||||||| |||| ||| |||  |||| |||||||| ||||  ||||||||||||  |||||||||||  || ||||||    
T  44056385 aattctcattggttaatgattatggagaaaataagaaggagagaaaatggaatgcaaattgc--atttaattttactctgaaaaagatgggttttttgaa 44056482  T
Q  112 aaaacata 119  Q
    ||||||||    
T  44056483 aaaacata 44056490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 36384001 - 36383878
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg-ttttgtttga 110  Q
    |||| ||||||| |||  ||||||||||| |||||||| | |||||||||||||||| ||||  |||||||||||| |||  ||||||| |||| || ||    
T  36384001 aattatcattggctaattattatggagaaaataaaaaggaaaacaaattgaatgcaatttgc--atttaattttactttg-gaaagatgatttttttaga 36383905  T
Q  111 aaaaacataatatcagcataaaagttg 137  Q
    ||||||||||||  | |||||||||||    
T  36383904 aaaaacataataataacataaaagttg 36383878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 12638966 - 12638842
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||  ||||||||    
T  12638966 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgc--atttaattttacattgaaaaaaataatttgtttg 12638869  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||||||||||  ||||||||||||    
T  12638868 aaaaaacataataatagcataaaagtt 12638842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 31690702 - 31690830
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  31690702 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 31690799  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  31690800 aaaaaacataataatagcataaaagttggtc 31690830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 20914936 - 20914809
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  20914936 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 20914839  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    ||||||||||| |  |||||||||||||||    
T  20914838 aaaaaacataaaaatagcataaaagttggt 20914809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 35462800 - 35462928
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||||||||||||||| |||| |||||||| | || |||||||||| || ||||||  ||||||||||||||||||||||||||||||||    
T  35462800 ataattctcattggttaaaaattatgaagaaaataaaaaggataataaattgaatgaaatttgcat--ttaattttacattgaaaaagatgttttgtttg 35462897  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  35462898 aaaaaacataataatagcataaaagttggtc 35462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 8146095 - 8146223
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| |||||||  |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  8146095 ataattctcattagttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 8146192  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  8146193 aaaaaacataataataacataaaagttggtc 8146223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 8541646 - 8541774
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  8541646 ataattctcattggttaaaaattatggagaaaataaaatggagaacaaatttaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 8541743  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  8541744 aaaaaacataataataacataaaagttggtc 8541774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 13146806 - 13146678
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||| || |||  |||||||||||||| |||||||| ||||||||    
T  13146806 ataattctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaatttacat--ttaattttacattggaaaagatgatttgtttg 13146709  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  13146708 aaaaaacataataatagcataaaagttggtc 13146678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 31316883 - 31317008
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||| ||| ||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  31316883 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacagattaaatgcaacttgc--atttaattttacattgaaaaagatgatttgtttg 31316980  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    ||||||||||| |  | |||||||||||    
T  31316981 aaaaaacataaaaataacataaaagttg 31317008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 16286165 - 16286289
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||  ||||||||||||||||||||||  ||||||||    
T  16286165 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaactaaatgcaacttgcat--ttaattttacattgaaaaagataatttgtttg 16286262  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    ||||||||||| |   |||||||||||    
T  16286263 aaaaaacataaaaattgcataaaagtt 16286289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 30086630 - 30086758
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||| |||  ||||||||||||||||| |||||||| ||||||||    
T  30086630 ataattctcattggctaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttg--tatttaattttacattggaaaagatgatttgtttg 30086727  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||    ||||||||||||||    
T  30086728 aaaaaacataataatgacataaaagttggtc 30086758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 25962530 - 25962658
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgca----acttgcatatttaattttacattgaaaaagatgttttg 105  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    ||||||  ||||||||||||||||||||||||| ||||    
T  25962530 ataattctcattggttaaaaattatggagaaaataaaaagtagaacaaattaaatgcaaatgacttgc--atttaattttacattgaaaaagatgatttg 25962627  T
Q  106 tttgaaaaaacataatatcagcataaaagtt 136  Q
    ||||||||||||||| |  ||||||||||||    
T  25962628 tttgaaaaaacataaaaatagcataaaagtt 25962658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 42365112 - 42365009
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||||||||    
T  42365112 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttgtttg 42365015  T
Q  110 aaaaaa 115  Q
    ||||||    
T  42365014 aaaaaa 42365009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 24432482 - 24432609
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||  |||||||||||||||| |||||||| ||| ||||    
T  24432482 ataattctcattggttaaaaattatggagaaaataaaaaggataacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttatttg 24432579  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||| |||| |  || ||||||||||||    
T  24432580 aaaaaatataaaaatagtataaaagttggt 24432609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 17825280 - 17825399
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| || |||||||||||| || ||||  ||||||||||||||||||||| ||| ||||||||    
T  17825280 ataattctcattggttaaaaattatggagaaaataaaaaggaggacaaattgaatgtaatttgc--atttaattttacattgaaaaatatgatttgtttg 17825377  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||  ||||||| |||||||||    
T  17825378 aaaaa--ataatattagcataaaa 17825399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 37066305 - 37066415
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||  |||||||||||||||| |||||||  ||||||||    
T  37066305 ataattctcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttgc--atttaattttacattggaaaagattatttgtttg 37066402  T
Q  110 aaaaaacataata 122  Q
    |||||| ||||||    
T  37066403 aaaaaatataata 37066415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 8144009 - 8143886
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    ||||||||||||||||  ||||||||||| |||||| | |||||||||||||||||| ||  |||||||||||||| |||||||||| | ||| ||||||    
T  8144009 aattctcattggttaatgattatggagaaaataaaatgtagaacaaattgaatgcaattt--atatttaattttactttgaaaaagaagatttatttgaa 8143912  T
Q  112 aaaacataatatcagcataaaagttg 137  Q
    |||||||||||  |||||||||||||    
T  8143911 aaaacataataatagcataaaagttg 8143886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 2002217 - 2002323
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    |||||| |||||||||  ||||||||||  ||| |||| |||||||||||||||||| ||||  |||||||||||  ||| |||||||| ||| ||||||    
T  2002217 aattcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgc--atttaattttattttggaaaagatgatttttttgaa 2002314  T
Q  112 aaaacataa 120  Q
    | |||||||    
T  2002315 ataacataa 2002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 24439647 - 24439524
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg-ttttgtttga 110  Q
    |||| ||||||| |||  |||||||| || |||||||| |||||||||||||||||| ||||  |||||||||||| |||  ||||||| ||||  ||||    
T  24439647 aattatcattggctaattattatggaaaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttactttg-gaaagatgatttttgttga 24439551  T
Q  111 aaaaacataatatcagcataaaagttg 137  Q
    ||||||||||||  | |||||||||||    
T  24439550 aaaaacataataataacataaaagttg 24439524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 20452545 - 20452625
Alignment:
Q  51 agaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataatatcagcataaaa 133  Q
    |||||||||||||| ||| || |||  ||||||||||| ||||| |||||  || |||||||||| |||||| ||||||||||    
T  20452545 agaacaaattgaatacaatttacat--ttaattttacaatgaaagagatgaattatttgaaaaaatataataacagcataaaa 20452625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 21539832 - 21539704
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  21539832 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 21539735  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  21539734 aaaaaacataataataacataaaagttggtc 21539704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 4033756 - 4033877
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  4033756 ataattctcgttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcat--ttaattttacattgaaaaagatgttttgtttg 4033853  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||||||||||  |||||||||    
T  4033854 aaaaaacataataatagcataaaa 4033877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 792437 - 792565
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||||| ||| ||||    
T  792437 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaagatgatttctttg 792534  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | ||||||||||||||    
T  792535 aaaaaacataataataacataaaagttggtc 792565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 33635411 - 33635283
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||  |||||||| ||||||||    
T  33635411 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattagaaaagatgatttgtttg 33635314  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||||||||||| |  ||||||||||||||||    
T  33635313 aaaaaacataaaaatagcataaaagttggtc 33635283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 5091621 - 5091751
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||    
T  5091621 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattgaaaaagatgatttgtttg 5091718  T
Q  110 --aaaaaacataatatcagcataaaagttggtc 140  Q
      |||||||||||||   |||||||||||||||    
T  5091719 aaaaaaaacataataatggcataaaagttggtc 5091751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 38549724 - 38549849
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||||||||  |||||||||||||||| |||||||| ||| ||||    
T  38549724 ataattctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaacttgc--atttaattttacattggaaaagatgatttatttg 38549821  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  |||||||||||||    
T  38549822 aaaaaacataataatagcataaaagttg 38549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 8784470 - 8784342
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||| |||| ||||||||||||||||| |||||||| |||||| ||||||||||| ||||||  ||||||||||||||||||||||| ||||||||    
T  8784470 ataattcttattgattaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcat--ttaattttacattgaaaaagatgatttgtttg 8784373  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    ||| |||||||||  ||||||||||||||||    
T  8784372 aaataacataataatagcataaaagttggtc 8784342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 29514100 - 29514228
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||| ||||| |||||||  |||||||||||||||||| ||||||  ||||||||||||| ||||||||| ||||||||    
T  29514100 ataattttcattggttaaaaattatagagaaaataaaaatgagaacaaattgaatgcaatttgcat--ttaattttacattaaaaaagatgatttgtttg 29514197  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  29514198 aaaaaacataataatagcataaaagttggtc 29514228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 43075825 - 43075698
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||  |||||||||||||||| || ||||| ||||||||    
T  43075825 ataattttcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgc--atttaattttacattggaatagatgatttgtttg 43075728  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  |||||||||||||||    
T  43075727 aaaaaacataataatagcataaaagttggt 43075698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 28424337 - 28424221
Alignment:
Q  22 ggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataat 121  Q
    ||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||  |||||||||||||| |||||||| ||||||||||||||||||||    
T  28424337 ggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcat--ttaattttacattggaaaagatgatttgtttgaaaaaacataat 28424240  T
Q  122 atcagcataaaagttggtc 140  Q
    |  ||||||||||||||||    
T  28424239 aatagcataaaagttggtc 28424221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 29514556 - 29514684
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||| || |||  ||||||||||||||  ||||||| ||||||||    
T  29514556 ataattttcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttacat--ttaattttacattgggaaagatgatttgtttg 29514653  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  29514654 aaaaaacataataatagcataaaagttggtc 29514684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 14565454 - 14565579
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| ||||  |||||||||||||||| |||||||| ||| ||||    
T  14565454 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgc--atttaattttacattggaaaagatgatttctttg 14565551  T
Q  110 -aaaaaacataatatcagcataaaagtt 136  Q
     |||||||||||||  ||||||||||||    
T  14565552 aaaaaaacataataatagcataaaagtt 14565579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 4092086 - 4091958
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||| ||||||||||||||||| || | |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  4092086 ataattctcaatggttaaaaattatggaaaaaacaaaaaggagaacaaattgaatgcaacttgc--atttaattttacattgaaaaagatgatttatttg 4091989  T
Q  110 -aaaaaacataatatcagcataaaagttggt 139  Q
     |||||| ||||||  |||||||||||||||    
T  4091988 aaaaaaatataataatagcataaaagttggt 4091958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 10478253 - 10478125
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||  ||||||||    
T  10478253 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatcatttgtttg 10478156  T
Q  110 -aaaaaacataatatcagcataaaagttggt 139  Q
     ||||||||||| |  ||||||||| |||||    
T  10478155 aaaaaaacataaaaatagcataaaaattggt 10478125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 28492595 - 28492467
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||| || |||||||||| ||||  |||||||||||||||| |||| ||| ||||||||    
T  28492595 ataattctcattggttaaaaattatagagaaaataaaaaggagaataagttgaatgcaatttgc--atttaattttacattggaaaaaatgatttgtttg 28492498  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||| ||||||  ||||||||||||||||    
T  28492497 aaaaaatataataatagcataaaagttggtc 28492467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 43451580 - 43451472
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  43451580 ataattttcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgc--atttaattttacattgaaaaagatgatttgtttg 43451483  T
Q  110 aaaaaacataa 120  Q
    ||| |||||||    
T  43451482 aaataacataa 43451472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 35832487 - 35832366
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| ||||||||  ||||| ||||||||||| ||||  ||||||||||| |||| |||||||| ||||||||    
T  35832487 ataattctcattagttaaaaattatggagaaaataaaaaggtgaacagattgaatgcaatttgc--atttaattttatattggaaaagatgatttgtttg 35832390  T
Q  110 aaaaaacataatatcagcataaaa 133  Q
    |||||||||||||  |||||||||    
T  35832389 aaaaaacataataatagcataaaa 35832366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 44803973 - 44803850
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| |||  ||||||||||||||||| |||||||| ||| |||     
T  44803973 ataattctcattggttaaaaattatggagaaaataaataggagaacaaattgaatgcaatttg--tatttaattttacattggaaaagatgatttattt- 44803877  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    |||||| ||||||  | ||||||||||    
T  44803876 aaaaaatataataataacataaaagtt 44803850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 22162368 - 22162271
Alignment:
Q  37 agaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataatatcagcataaaagtt 136  Q
    |||| |||||||| |||||| ||||||||||| ||||||  |||||||||||||| |||||||  |||||||||||||||||||||  ||||||||||||    
T  22162368 agaaaataaaaaggagaacacattgaatgcaatttgcat--ttaattttacattggaaaagattatttgtttgaaaaaacataataatagcataaaagtt 22162271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 9294728 - 9294603
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaa 111  Q
    |||||| |||||||||  ||||||||||  ||| | ||||||||||||||||||||| ||||  |||||||||||| |||||||||||| ||| | ||||    
T  9294728 aattcttattggttaatgattatggagagaatagagagaagaacaaattgaatgcaatttgc--atttaattttactttgaaaaagatgatttttatgaa 9294631  T
Q  112 aaaacataatatcagcataaaagttggt 139  Q
    | |||||||||  | ||||||| |||||    
T  9294630 ataacataataagaacataaaaattggt 9294603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 15858740 - 15858819
Alignment:
Q  59 ttgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||| ||||||  |||||||||||||| |||||||| ||| |||||||||||||||||  ||||||||| ||||||    
T  15858740 ttgaatgcaatttgcat--ttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaatttggtc 15858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 18833993 - 18834066
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttac 87  Q
    |||| |||||||||||  ||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||||||    
T  18833993 aattatcattggttaattattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttac 18834066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 15068808 - 15068722
Alignment:
Q  12 aattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatg 100  Q
    |||||| |||||||||  ||||||||||  ||| |||| |||||||||||||||||| ||||  |||||||||||| ||| ||||||||    
T  15068808 aattcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgc--atttaattttactttggaaaagatg 15068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 13822854 - 13822959
Alignment:
Q  13 attctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaa 112  Q
    ||||| |||||||||  ||||||||||  ||| |||  |||||||||||||||||| ||||  |||||||||||| |||||||||||  ||| ||| |||    
T  13822854 attcttattggttaatgattatggagagaatagaaatgagaacaaattgaatgcaatttgc--atttaattttactttgaaaaagattatttttttaaaa 13822951  T
Q  113 aaacataa 120  Q
     |||||||    
T  13822952 taacataa 13822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 10979244 - 10979197
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaa 57  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||    
T  10979244 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaa 10979197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 10979198 - 10979138
Alignment:
Q  80 aattttacattgaaaaagatgttttgtttgaaaaaacataatatcagcataaaagttggtc 140  Q
    |||| ||| ||| |||||||| ||||||||||||||||||| |  ||||||||||||||||    
T  10979198 aattctactttggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtc 10979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 33756331 - 33756204
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||| ||||||  ||||||||||||||||||| ||| ||||||||    
T  33756331 ataattctcattggttaaaaattatggagaaaatgaaaaggaggacaaattgaatgcaatttgcat--ttaattttacattgaaaaaaatgatttgtttg 33756234  T
Q  110 aaaaaacataatatcagcataaaagttggt 139  Q
    |||||||||||||  |||||||||||||||    
T  33756233 aaaaaacataataatagcataaaagttggt 33756204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 10227987 - 10227859
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||  ||||||||||| |||| |||||||| ||||||||    
T  10227987 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgc--atttaattttatattggaaaagatgatttgtttg 10227890  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
     ||||||||||||  ||||||||||||||||    
T  10227889 gaaaaacataataatagcataaaagttggtc 10227859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 17721891 - 17722019
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||| |||| ||| ||| ||||    
T  17721891 ataattctcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacattggaaaatatgatttctttg 17721988  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  17721989 aaaaaacataataatagcataaaagttggtc 17722019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 30949210 - 30949086
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  30949210 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 30949113  T
Q  110 aaaaaacataatatcagcataaaagtt 136  Q
    ||||||||||| |  ||||||||||||    
T  30949112 aaaaaacataaaaatagcataaaagtt 30949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 12278781 - 12278656
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||  |||| ||| ||||||||    
T  12278781 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacatttgaaaaaatgatttgtttg 12278684  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  | |||||||||||    
T  12278683 aaaaaacataataataacataaaagttg 12278656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 374174 - 374046
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||  |||||||||||||| | |||| ||| ||||||||    
T  374174 ataattttcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatgcaatttgc--atttaattttacatcggaaaatatgatttgtttg 374077  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  ||||||||||||||||    
T  374076 aaaaaacataataatagcataaaagttggtc 374046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 17598368 - 17598240
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||| ||||  |||||||||||||||| |||||| | ||||||||    
T  17598368 ataattctcattggttaaaaattatggagaaaataaaaaagagaataaattgaatgcaatttgc--atttaattttacattggaaaagaagatttgtttg 17598271  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
    |||||||||||||  | |||| |||||||||    
T  17598270 aaaaaacataataataacatacaagttggtc 17598240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 30766521 - 30766396
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||| ||||||| ||||  ||||||||||||||||||||| ||  ||| ||||    
T  30766521 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattcaatgcaatttgc--atttaattttacattgaaaaaaataatttctttg 30766424  T
Q  110 aaaaaacataatatcagcataaaagttg 137  Q
    |||||||||||||  | |||||||||||    
T  30766423 aaaaaacataataataacataaaagttg 30766396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 31887203 - 31887332
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    |||||| | |||||||||||||||||||||| |||||||  |||||||||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  31887203 ataatttttattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaacttgc--atttaattttacattggaaaagatgatttgtttg 31887300  T
Q  110 -aaaaaacataatatcagcataaaagttggtc 140  Q
     ||||||||||| |  ||||||||||||||||    
T  31887301 aaaaaaacataaaaatagcataaaagttggtc 31887332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 3888484 - 3888396
Alignment:
Q  30 attatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttgaaaaaacataat 121  Q
    ||||| ||||| || ||||  |||||||||||||||||  ||||  |||||||||| | |||||||||||  ||| ||||||||||||||||    
T  3888484 attatagagaaaatgaaaaagagaacaaattgaatgcactttgc--atttaattttcctttgaaaaagataattt-tttgaaaaaacataat 3888396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 4705 - 4578
Alignment:
Q  10 ataattctcattggttaaaaattatggagaatataaaaagaagaacaaattgaatgcaacttgcatatttaattttacattgaaaaagatgttttgtttg 109  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||  ||||||||||| ||||  ||||||| ||||||||    
T  4705 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgc--atttaattttatattg-gaaagatgatttgtttg 4609  T
Q  110 aaaaaacataatatcagcataaaagttggtc 140  Q
     ||||||||||||  ||||||||||||||||    
T  4608 gaaaaacataataatagcataaaagttggtc 4578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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