View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16929_high_39 (Length: 249)
Name: NF16929_high_39
Description: NF16929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16929_high_39 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 41834445 - 41834204
Alignment:
| Q |
1 |
ttcatcaaactgagaaagatcttttagaaaacgagttttcatcctcaattttccattttcactgcacttggtgccttcaaaatgatacatattaaaattc |
100 |
Q |
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| T |
41834445 |
ttcatcaaactgagaaagatcttttagaaaacgagttttcatcctcaattttccattttcactgcacttggtgccttccaaatgatacatattaaaattc |
41834346 |
T |
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| Q |
101 |
aaaacgataaactcatgtcatgtgatacatatacatatttgaattataaatgtggatatttctcacaatcgtaatttaaagatttaccctctacattcta |
200 |
Q |
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| T |
41834345 |
aaaactatcaactcatgtcatgtgatacatatacatatctgaattataaatgtggatatttctcacaatcgtaatttaaagatttaccctctacattcaa |
41834246 |
T |
|
| Q |
201 |
tgtgtatcctttatgtgggaaaccataatctgtattcatctc |
242 |
Q |
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| T |
41834245 |
tatgtatcctttctgtgggaaaccataatctgtatttatctc |
41834204 |
T |
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