View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16929_high_46 (Length: 238)

Name: NF16929_high_46
Description: NF16929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16929_high_46
NF16929_high_46
[»] chr8 (45 HSPs)
chr8 (30-167)||(7998478-7998615)
chr8 (90-220)||(9864296-9864425)
chr8 (91-220)||(5299860-5299988)
chr8 (91-220)||(36694880-36695008)
chr8 (91-223)||(40862564-40862695)
chr8 (95-218)||(6098436-6098558)
chr8 (90-218)||(4132599-4132725)
chr8 (89-220)||(44869645-44869775)
chr8 (90-220)||(41910902-41911030)
chr8 (90-218)||(1149545-1149672)
chr8 (90-218)||(16446788-16446915)
chr8 (90-218)||(37970432-37970559)
chr8 (91-219)||(12876258-12876386)
chr8 (91-216)||(33906364-33906488)
chr8 (91-220)||(38644126-38644254)
chr8 (90-218)||(1205077-1205204)
chr8 (92-220)||(11727172-11727299)
chr8 (91-218)||(27082752-27082878)
chr8 (90-220)||(13307771-13307899)
chr8 (91-218)||(8803731-8803857)
chr8 (91-218)||(16223013-16223139)
chr8 (92-223)||(39099034-39099164)
chr8 (91-218)||(43643509-43643635)
chr8 (90-218)||(1953901-1954029)
chr8 (91-191)||(7890871-7890971)
chr8 (91-218)||(31933800-31933926)
chr8 (97-220)||(43025850-43025972)
chr8 (90-191)||(30654496-30654597)
chr8 (91-218)||(34895117-34895238)
chr8 (173-220)||(7998442-7998489)
chr8 (156-220)||(465990-466053)
chr8 (90-218)||(23854344-23854471)
chr8 (90-218)||(10555117-10555242)
chr8 (91-172)||(1149834-1149911)
chr8 (92-218)||(35459626-35459751)
chr8 (162-218)||(1150090-1150145)
chr8 (172-220)||(34952026-34952073)
chr8 (135-186)||(12585297-12585348)
chr8 (53-87)||(5299711-5299745)
chr8 (53-87)||(16446640-16446674)
chr8 (54-87)||(7890723-7890756)
chr8 (54-87)||(38644369-38644402)
chr8 (51-87)||(1149395-1149431)
chr8 (53-85)||(11727418-11727450)
chr8 (51-87)||(33198193-33198229)
[»] chr3 (62 HSPs)
chr3 (90-220)||(34133075-34133204)
chr3 (90-220)||(44891637-44891766)
chr3 (92-220)||(45174645-45174773)
chr3 (90-220)||(33698293-33698422)
chr3 (92-223)||(46297671-46297801)
chr3 (90-220)||(11466964-11467093)
chr3 (97-223)||(25579876-25580001)
chr3 (89-220)||(36012277-36012409)
chr3 (91-218)||(52040830-52040956)
chr3 (92-218)||(39282794-39282919)
chr3 (91-220)||(2008073-2008200)
chr3 (91-220)||(32373610-32373738)
chr3 (91-203)||(24708023-24708135)
chr3 (90-218)||(46994568-46994695)
chr3 (113-220)||(35844466-35844572)
chr3 (91-218)||(54828609-54828735)
chr3 (91-223)||(22622626-22622757)
chr3 (91-218)||(37157849-37157976)
chr3 (90-218)||(42505982-42506109)
chr3 (95-218)||(53229064-53229186)
chr3 (91-203)||(1089849-1089962)
chr3 (91-220)||(7327390-7327518)
chr3 (91-216)||(33378693-33378817)
chr3 (91-220)||(43348397-43348525)
chr3 (90-218)||(21009709-21009836)
chr3 (90-218)||(22445972-22446098)
chr3 (91-218)||(26941168-26941294)
chr3 (91-213)||(3362402-3362523)
chr3 (92-218)||(48355083-48355208)
chr3 (90-218)||(4761555-4761683)
chr3 (91-220)||(29163958-29164077)
chr3 (90-218)||(37203209-37203337)
chr3 (135-223)||(11835579-11835667)
chr3 (91-202)||(20373152-20373263)
chr3 (93-220)||(24488872-24488998)
chr3 (91-218)||(40552167-40552293)
chr3 (84-220)||(21193746-21193883)
chr3 (92-218)||(54505949-54506074)
chr3 (95-220)||(3655114-3655238)
chr3 (83-220)||(14586579-14586706)
chr3 (91-167)||(11357289-11357365)
chr3 (92-218)||(38591840-38591965)
chr3 (91-216)||(22451112-22451236)
chr3 (91-203)||(4015616-4015727)
chr3 (91-216)||(43975800-43975920)
chr3 (131-218)||(53176196-53176282)
chr3 (157-218)||(51212955-51213015)
chr3 (51-87)||(29099730-29099766)
chr3 (91-167)||(40936165-40936241)
chr3 (167-223)||(44186485-44186540)
chr3 (90-220)||(29099495-29099615)
chr3 (53-87)||(36012523-36012557)
chr3 (54-87)||(4015842-4015875)
chr3 (54-87)||(21193990-21194023)
chr3 (91-179)||(47481702-47481790)
chr3 (52-87)||(11467193-11467228)
chr3 (91-167)||(27480270-27480350)
chr3 (52-87)||(37158091-37158126)
chr3 (53-87)||(37203451-37203485)
chr3 (54-87)||(33378545-33378578)
chr3 (92-172)||(11357059-11357139)
chr3 (55-87)||(39283035-39283067)
[»] chr2 (44 HSPs)
chr2 (89-220)||(36642135-36642267)
chr2 (91-220)||(3177088-3177216)
chr2 (90-218)||(17071662-17071789)
chr2 (90-218)||(41960991-41961118)
chr2 (95-220)||(4167071-4167195)
chr2 (90-218)||(2325303-2325430)
chr2 (90-217)||(17054021-17054147)
chr2 (91-215)||(41465655-41465778)
chr2 (92-220)||(44286098-44286225)
chr2 (91-220)||(4264002-4264131)
chr2 (91-220)||(44913812-44913941)
chr2 (90-223)||(4763777-4763909)
chr2 (92-220)||(4478518-4478641)
chr2 (92-217)||(26357729-26357853)
chr2 (90-223)||(29242063-29242195)
chr2 (91-220)||(31570660-31570788)
chr2 (92-220)||(18258214-18258341)
chr2 (94-218)||(43648174-43648297)
chr2 (91-202)||(35959062-35959173)
chr2 (91-220)||(33709158-33709286)
chr2 (91-216)||(45327873-45327997)
chr2 (113-220)||(19424576-19424682)
chr2 (91-218)||(33550913-33551038)
chr2 (115-203)||(33902231-33902319)
chr2 (91-220)||(19314000-19314121)
chr2 (91-218)||(31862003-31862129)
chr2 (90-218)||(19289248-19289375)
chr2 (92-220)||(33660304-33660422)
chr2 (95-220)||(37905857-37905983)
chr2 (90-203)||(11366306-11366419)
chr2 (91-220)||(18494207-18494334)
chr2 (91-167)||(7006864-7006940)
chr2 (156-220)||(27349930-27349993)
chr2 (91-220)||(39167295-39167417)
chr2 (90-195)||(13711632-13711737)
chr2 (94-191)||(41463779-41463876)
chr2 (92-220)||(43770775-43770893)
chr2 (53-87)||(33660154-33660188)
chr2 (51-87)||(27349728-27349764)
chr2 (173-220)||(7006929-7006975)
chr2 (91-220)||(5881688-5881806)
chr2 (53-82)||(5874574-5874603)
chr2 (54-87)||(19424420-19424453)
chr2 (91-172)||(19500841-19500922)
[»] chr7 (54 HSPs)
chr7 (91-218)||(9355735-9355861)
chr7 (90-220)||(6546643-6546772)
chr7 (90-220)||(21991760-21991889)
chr7 (90-220)||(15612667-15612796)
chr7 (95-220)||(15672675-15672799)
chr7 (90-215)||(27283873-27283997)
chr7 (90-216)||(38258673-38258798)
chr7 (95-220)||(43686164-43686288)
chr7 (91-223)||(5657390-5657521)
chr7 (91-218)||(23111316-23111444)
chr7 (92-218)||(37703408-37703533)
chr7 (91-216)||(41764987-41765111)
chr7 (90-218)||(18797453-18797580)
chr7 (95-220)||(4583043-4583167)
chr7 (91-220)||(8861409-8861537)
chr7 (91-203)||(32820962-32821074)
chr7 (90-214)||(11071336-11071456)
chr7 (92-218)||(37347148-37347272)
chr7 (91-220)||(32432576-32432704)
chr7 (113-218)||(37704283-37704387)
chr7 (95-220)||(44598790-44598914)
chr7 (91-216)||(48928206-48928330)
chr7 (91-216)||(48928473-48928597)
chr7 (90-218)||(7334920-7335046)
chr7 (83-214)||(10481735-10481866)
chr7 (95-223)||(25691457-25691584)
chr7 (90-218)||(30055653-30055780)
chr7 (95-218)||(31578977-31579099)
chr7 (91-218)||(37109998-37110126)
chr7 (135-220)||(26588037-26588121)
chr7 (95-220)||(43925225-43925349)
chr7 (91-203)||(10359123-10359235)
chr7 (92-220)||(12165876-12165994)
chr7 (90-218)||(24211867-24211994)
chr7 (91-218)||(17842493-17842621)
chr7 (135-220)||(22687363-22687447)
chr7 (115-220)||(27421313-27421417)
chr7 (91-220)||(33688171-33688299)
chr7 (91-192)||(35353259-35353360)
chr7 (149-218)||(44413346-44413414)
chr7 (91-191)||(46481038-46481138)
chr7 (92-167)||(31520651-31520726)
chr7 (91-167)||(32593115-32593191)
chr7 (92-167)||(26980482-26980557)
chr7 (92-167)||(29173699-29173773)
chr7 (54-87)||(6546886-6546919)
chr7 (54-87)||(15612520-15612553)
chr7 (90-167)||(38053637-38053714)
chr7 (173-220)||(26980447-26980493)
chr7 (173-220)||(29173664-29173710)
chr7 (53-87)||(26980673-26980707)
chr7 (95-149)||(44411453-44411507)
chr7 (173-218)||(31520715-31520759)
chr7 (55-87)||(32432819-32432851)
[»] chr5 (63 HSPs)
chr5 (89-220)||(35934044-35934175)
chr5 (92-218)||(699301-699426)
chr5 (90-216)||(31786543-31786668)
chr5 (90-218)||(23116119-23116246)
chr5 (95-220)||(21088668-21088792)
chr5 (95-220)||(36866911-36867035)
chr5 (95-220)||(40133534-40133658)
chr5 (91-218)||(27318385-27318511)
chr5 (90-220)||(19120008-19120137)
chr5 (92-218)||(22980944-22981069)
chr5 (90-220)||(25500823-25500952)
chr5 (91-216)||(38528135-38528259)
chr5 (90-218)||(22255333-22255460)
chr5 (92-220)||(30969223-30969350)
chr5 (91-218)||(5830043-5830169)
chr5 (95-218)||(23954692-23954813)
chr5 (90-220)||(5837704-5837833)
chr5 (90-216)||(13956259-13956384)
chr5 (91-216)||(33908386-33908510)
chr5 (90-218)||(2888342-2888469)
chr5 (95-218)||(36860574-36860697)
chr5 (91-218)||(7208762-7208888)
chr5 (135-218)||(12910506-12910588)
chr5 (113-220)||(26268223-26268329)
chr5 (90-214)||(8437120-8437243)
chr5 (92-220)||(9200382-9200500)
chr5 (96-223)||(14919431-14919557)
chr5 (89-220)||(15992436-15992566)
chr5 (91-218)||(35504516-35504642)
chr5 (91-218)||(35511380-35511501)
chr5 (91-213)||(35826384-35826503)
chr5 (91-220)||(8741783-8741912)
chr5 (91-220)||(32563298-32563417)
chr5 (113-220)||(6824400-6824505)
chr5 (91-218)||(22973980-22974106)
chr5 (91-218)||(31705510-31705636)
chr5 (91-220)||(27330453-27330581)
chr5 (135-220)||(39572968-39573052)
chr5 (91-185)||(17157929-17158023)
chr5 (95-220)||(22019781-22019896)
chr5 (91-220)||(25669735-25669853)
chr5 (156-220)||(7693379-7693442)
chr5 (91-167)||(24886288-24886364)
chr5 (90-167)||(1429059-1429136)
chr5 (91-220)||(15724637-15724765)
chr5 (156-220)||(28416490-28416553)
chr5 (156-220)||(42342880-42342942)
chr5 (90-151)||(25889587-25889648)
chr5 (54-87)||(42343113-42343146)
chr5 (44-84)||(9200619-9200659)
chr5 (51-87)||(26269201-26269237)
chr5 (91-149)||(14409239-14409297)
chr5 (53-87)||(19120251-19120285)
chr5 (53-87)||(22020015-22020049)
chr5 (54-84)||(25500676-25500706)
chr5 (53-87)||(27330696-27330730)
chr5 (53-87)||(28416300-28416334)
chr5 (53-87)||(35511231-35511265)
chr5 (173-218)||(1429125-1429169)
chr5 (54-87)||(11898207-11898240)
chr5 (51-84)||(38527984-38528017)
chr5 (135-215)||(5112256-5112334)
chr5 (55-87)||(39573203-39573235)
[»] scaffold0318 (2 HSPs)
scaffold0318 (91-220)||(12058-12186)
scaffold0318 (55-87)||(12300-12332)
[»] chr4 (59 HSPs)
chr4 (91-220)||(17173439-17173567)
chr4 (92-223)||(35020970-35021100)
chr4 (90-220)||(7703658-7703787)
chr4 (91-220)||(17167862-17167990)
chr4 (91-216)||(28002920-28003044)
chr4 (91-220)||(47253889-47254017)
chr4 (91-220)||(55241039-55241167)
chr4 (91-203)||(35025530-35025642)
chr4 (91-218)||(55477825-55477951)
chr4 (90-203)||(1815466-1815579)
chr4 (91-220)||(33341547-33341675)
chr4 (92-218)||(36493624-36493748)
chr4 (90-218)||(4934135-4934262)
chr4 (95-220)||(34948033-34948159)
chr4 (90-218)||(37663674-37663801)
chr4 (92-218)||(25700991-25701117)
chr4 (89-220)||(54499170-54499300)
chr4 (91-220)||(37287875-37288005)
chr4 (91-220)||(37775816-37775935)
chr4 (90-223)||(46888091-46888222)
chr4 (91-215)||(32579600-32579723)
chr4 (91-218)||(25184264-25184390)
chr4 (91-218)||(38012005-38012131)
chr4 (90-223)||(34361425-34361557)
chr4 (90-218)||(50697392-50697520)
chr4 (91-218)||(3042770-3042896)
chr4 (91-218)||(19440582-19440708)
chr4 (91-182)||(50764906-50764997)
chr4 (91-213)||(5047900-5048020)
chr4 (90-220)||(23761221-23761349)
chr4 (91-220)||(30002575-30002694)
chr4 (90-218)||(879481-879608)
chr4 (95-203)||(6864200-6864308)
chr4 (90-218)||(19089386-19089513)
chr4 (90-218)||(32912513-32912640)
chr4 (93-184)||(33816452-33816543)
chr4 (92-218)||(46884045-46884168)
chr4 (91-220)||(17272113-17272241)
chr4 (90-218)||(42199880-42200007)
chr4 (91-177)||(49376158-49376244)
chr4 (95-220)||(4598141-4598255)
chr4 (90-171)||(7152137-7152218)
chr4 (153-218)||(9139396-9139460)
chr4 (91-220)||(29584134-29584262)
chr4 (156-220)||(32592242-32592305)
chr4 (98-220)||(27396765-27396886)
chr4 (160-216)||(33816536-33816591)
chr4 (162-220)||(39398058-39398115)
chr4 (54-87)||(4598374-4598407)
chr4 (51-87)||(4205376-4205412)
chr4 (51-87)||(29583983-29584019)
chr4 (53-88)||(17272355-17272390)
chr4 (57-87)||(7703901-7703931)
chr4 (53-87)||(23431947-23431981)
chr4 (53-87)||(34361276-34361310)
chr4 (54-87)||(19440434-19440467)
chr4 (54-87)||(49376359-49376392)
chr4 (51-87)||(32912362-32912398)
chr4 (55-87)||(37776050-37776082)
[»] scaffold0002 (3 HSPs)
scaffold0002 (91-220)||(283-411)
scaffold0002 (91-218)||(408337-408463)
scaffold0002 (130-218)||(94330-94417)
[»] chr6 (17 HSPs)
chr6 (91-220)||(4318729-4318858)
chr6 (91-216)||(7234942-7235066)
chr6 (91-220)||(30353265-30353393)
chr6 (91-220)||(3879846-3879974)
chr6 (91-220)||(21017019-21017147)
chr6 (91-215)||(20768236-20768359)
chr6 (89-220)||(8513382-8513507)
chr6 (99-216)||(15491768-15491884)
chr6 (91-218)||(1945985-1946111)
chr6 (90-223)||(6091088-6091221)
chr6 (91-220)||(29182312-29182441)
chr6 (90-210)||(6089067-6089181)
chr6 (90-218)||(5627542-5627669)
chr6 (135-218)||(7055166-7055248)
chr6 (91-220)||(33892919-33893038)
chr6 (51-84)||(5627787-5627820)
chr6 (55-87)||(1946228-1946260)
[»] chr1 (58 HSPs)
chr1 (95-220)||(238420-238544)
chr1 (90-218)||(15383080-15383207)
chr1 (89-220)||(39393528-39393659)
chr1 (92-218)||(27227389-27227514)
chr1 (92-217)||(2959896-2960020)
chr1 (92-220)||(7078967-7079094)
chr1 (95-223)||(30326859-30326986)
chr1 (90-218)||(32267181-32267308)
chr1 (91-218)||(8222275-8222401)
chr1 (91-218)||(25160779-25160905)
chr1 (91-220)||(27532884-27533011)
chr1 (95-203)||(32216216-32216324)
chr1 (92-220)||(47279334-47279461)
chr1 (95-218)||(15752176-15752298)
chr1 (91-218)||(16415793-16415919)
chr1 (90-220)||(38823359-38823488)
chr1 (91-216)||(4330430-4330554)
chr1 (91-216)||(33725503-33725627)
chr1 (91-216)||(40884962-40885086)
chr1 (90-218)||(9902956-9903083)
chr1 (90-218)||(10181910-10182037)
chr1 (95-218)||(22170858-22170980)
chr1 (91-218)||(51129006-51129132)
chr1 (91-213)||(15168248-15168369)
chr1 (92-218)||(37451432-37451557)
chr1 (90-192)||(47682396-47682498)
chr1 (90-175)||(1359837-1359922)
chr1 (113-218)||(42721186-42721290)
chr1 (92-218)||(27267104-27267228)
chr1 (97-218)||(18422798-18422918)
chr1 (135-223)||(1547421-1547508)
chr1 (91-218)||(41926310-41926430)
chr1 (90-220)||(3309292-3309427)
chr1 (91-218)||(19899672-19899798)
chr1 (90-220)||(3535077-3535197)
chr1 (92-218)||(27563809-27563934)
chr1 (92-218)||(34012286-34012406)
chr1 (113-203)||(38759694-38759784)
chr1 (90-218)||(23999494-23999621)
chr1 (92-218)||(27763215-27763340)
chr1 (90-220)||(48620782-48620902)
chr1 (90-218)||(28769799-28769927)
chr1 (95-215)||(30254573-30254692)
chr1 (92-218)||(10922874-10922999)
chr1 (90-180)||(46931593-46931683)
chr1 (91-216)||(14758190-14758305)
chr1 (91-216)||(31621452-31621580)
chr1 (95-218)||(28564690-28564810)
chr1 (92-172)||(48353735-48353814)
chr1 (53-87)||(48620977-48621011)
chr1 (51-84)||(48353933-48353966)
chr1 (52-87)||(31963005-31963040)
chr1 (53-87)||(14758420-14758454)
chr1 (54-84)||(27532737-27532767)
chr1 (175-220)||(11742338-11742382)
chr1 (54-87)||(34012137-34012170)
chr1 (91-167)||(11742271-11742347)
chr1 (51-87)||(32267422-32267458)
[»] scaffold0008 (1 HSPs)
scaffold0008 (95-218)||(267435-267558)
[»] scaffold0291 (1 HSPs)
scaffold0291 (91-218)||(8038-8164)
[»] scaffold0022 (1 HSPs)
scaffold0022 (93-218)||(145926-146050)
[»] scaffold0061 (1 HSPs)
scaffold0061 (91-203)||(44122-44233)
[»] scaffold0017 (1 HSPs)
scaffold0017 (91-203)||(154554-154665)


Alignment Details
Target: chr8 (Bit Score: 102; Significance: 9e-51; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 7998615 - 7998478
Alignment:
Q  30 ttcatataacggggatattagttagggagcttctacggtgcagtcatgaaactgacttacggtactattttatcgttggtatttttaacatggaaacata 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||| |    
T  7998615 ttcatataacgtggatattagttagggagcttctacggtgcagtcatgaaactgacttacggtactattttatcgttggcatctttaatatagaaacaga 7998516  T
Q  130 attgctgatattatgtgataatattaagtgttacactt 167  Q
     ||| ||||||||||||||| |||||||||||||||||    
T  7998515 gttgttgatattatgtgatagtattaagtgttacactt 7998478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 9864425 - 9864296
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| ||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  9864425 ggtactattttatcgttggcatctttaacatgcaaacaaaattgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaac 9864326  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||| ||||||||||||    
T  9864325 aaggtaggat-aaaattatattaagtgtatt 9864296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 5299860 - 5299988
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||||||||||| || ||||||| |||||||||||||||||||| |||||||||||||||||    
T  5299860 gtactattttatcgttgttatctttaacatgcaaacaaaattgctgatatcatttgataatcttaagtgttacactttgtggggtgttacacttaaaaca 5299959  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || | |||| ||||||||||||||||||||    
T  5299960 aggttggat-aaaattagattaagtgtatt 5299988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 36694880 - 36695008
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  36694880 gtactattttatcgttggcatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaaca 36694979  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    |  |||||| ||||||||||||||||||||    
T  36694980 atgtaggat-aaaattagattaagtgtatt 36695008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 40862695 - 40862564
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||  ||||||| ||| | ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  40862695 gtactattttatcgttgacatctttaacatacaaacatagttgataatattatgtgatagtcttaagtgttacactttgtggagtgttacacttagaaca 40862596  T
Q  191 agataggataaaaattagattaagtgtattttt 223  Q
    |  |||||| |||||||||||||||||||||||    
T  40862595 aagtaggat-aaaattagattaagtgtattttt 40862564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 6098436 - 6098558
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||| ||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  6098436 tattgtatcgttggcatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaacaagat 6098535  T
Q  195 aggataaaaattagattaagtgta 218  Q
    ||||| ||||||||||||| ||||    
T  6098536 aggat-aaaattagattaaatgta 6098558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 4132599 - 4132725
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||| | ||| |||||||||||||||| ||||||||||| ||||    
T  4132599 ggtactattttatcgttggcatctttaacatgcaaacatagttgatgatattatgtgatagtcttatgtgttacactttgtggggtgttacactt-aaac 4132697  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| ||| || ||||||||||||||||||    
T  4132698 aaggtagaat-aaaattagattaagtgta 4132725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 44869775 - 44869645
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    |||||||||||||||||||  || ||||||||||||||| | |||||||||| || ||||| | |||||||||||||||||||| |    ||||||||||    
T  44869775 cggtactattttatcgttgacatctttaacatggaaacaaagttgctgatatcatttgatagtcttaagtgttacactttgtgg-ggacaacacttaaaa 44869677  T
Q  189 caagataggataaaaattagattaagtgtatt 220  Q
    |||| |||||||||||||||||||||||||||    
T  44869676 caaggtaggataaaaattagattaagtgtatt 44869645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 41910902 - 41911030
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||| |||||||||||||  || ||||||||| ||||| | ||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  41910902 ggtaatattttatcgttgc-atctttaacatgcaaacagagttggtgatatcatgtgatagtattaagtgttacactttgtggggtgttacacttaaaac 41911000  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||||||| ||||||    
T  41911001 aaggtaggat-aaaattagattaaatgtatt 41911030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 1149545 - 1149672
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| | ||| | ||||||||||||| | |||||||||||||||||||| ||||||| |||| |||    
T  1149545 ggtactattttatcgttggaatctttaacatgcaaacaaagttgataatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttataac 1149644  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||||||||||||||    
T  1149645 aaggtaagat-aaaattagattaagtgta 1149672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 16446788 - 16446915
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||||||||||||| |||| || ||||||||| ||||| | ||| ||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||||    
T  16446788 ggtactattttatcattggcatctttaacatgcaaacagatttgatgatattatgtgatagtcttaagtgttacgctttgtggggtgttacacttgaaac 16446887  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||| ||||||||||    
T  16446888 aaggtaggat-aaaattaaattaagtgta 16446915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 37970432 - 37970559
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| ||  | || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| |||||||||||| |||    
T  37970432 ggtactattttattgtaaggatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttataac 37970531  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  37970532 aaggtaggat-aaaattagattaagtgta 37970559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 12876386 - 12876258
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatatt-aagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | || |||||||||||||||||| ||||||| |||||||     
T  12876386 gtactattttatcgttgacatctttaacatgcaaacagagttgatgatattatgtgatagtctttaagtgttacactttgtggggtgttacgcttaaaat 12876287  T
Q  190 aagataggataaaaattagattaagtgtat 219  Q
    ||| |||||| |||||||||||||||||||    
T  12876286 aaggtaggat-aaaattagattaagtgtat 12876258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 33906488 - 33906364
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| |||||||||| |||| | |||||||||||||||| |||| |||||| |||||||||    
T  33906488 gtactattttatcgttgacatctttaacatgcaaacatagttgatgatattatgcgatagtcttaagtgttacactttttggaatgttacccttaaaaca 33906389  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || || ||| ||||||||||||||||    
T  33906388 aggtatgat-aaaattagattaagtg 33906364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 38644254 - 38644126
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| |||  || |||||| || ||||| | |||||||||| || ||||| | || ||||||||||||| |||||||||||||||||||||    
T  38644254 gtactattttatcattgacatctttaacttgcaaacagagttgctgatatcatatgatagtcttgagtgttacactttatggagtgttacacttaaaaca 38644155  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||||||||    
T  38644154 aggtaggat-aaaattagattaagtgtatt 38644126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 1205204 - 1205077
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||||||||||||||||   || ||||||||| ||||| | ||| |||||||||| |||| | |||||||||||||||||||| ||||||| ||||||||    
T  1205204 ggtactattttatcgttaaaatctttaacatgcaaacagagttgatgatattatgcgatagtcttaagtgttacactttgtggggtgttacgcttaaaac 1205105  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||||||||||||||    
T  1205104 aaggtaagat-aaaattagattaagtgta 1205077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 11727299 - 11727172
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||  ||||| | ||| |||||| |||||||| | |||||||||||| ||||||| ||||||||||||||| ||    
T  11727299 tactattttatcgttggcatctttaacattcaaacaaagttgttgatatcatgtgatagtcttaagtgttacattttgtggggtgttacacttaaaataa 11727200  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | |||||| ||||||||||||| ||||||    
T  11727199 ggtaggat-aaaattagattaaatgtatt 11727172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 27082752 - 27082878
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||  ||||||||||||||| | ||||||||||||||||| || |||||| ||||||||||    
T  27082752 gtactattttatcgttgacatctttaacatgcaaacatagtttatgatattatgtgatagtcttaagtgttacactttgcggggtgttagacttaaaaca 27082851  T
Q  191 agataggataaaaattagattaagtgta 218  Q
     | || ||| ||||||||||||||||||    
T  27082852 tggtaagat-aaaattagattaagtgta 27082878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 13307899 - 13307771
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  ||||| |||||| ||||| | ||| |||||| |||||||| | |||||||||||||||||||| |||||||| ||||||     
T  13307899 ggtactattttatcgttgacatttt-aacatgcaaacagagttgttgatatcatgtgatagtcttaagtgttacactttgtggggtgttacatttaaaat 13307801  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||  |||||| ||||||||||||||||||||    
T  13307800 aaagtaggat-aaaattagattaagtgtatt 13307771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 8803731 - 8803857
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| |||||||||||||||||| | | ||||||| |||| ||||    
T  8803731 gtactattttatcgttggaatctttaacatgcaaatagagttgatgatattatgtgatagtattaagtgttacactttttagggtgttacgcttagaaca 8803830  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||| ||||||||||    
T  8803831 aggtatgat-aaaattatattaagtgta 8803857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 16223139 - 16223013
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| |||| || ||||| ||| ||||| | ||| ||||||||||||||| | |||||||||||||||| ||| |||||||  ||||||||    
T  16223139 gtactattttatcattggaatctttaaaatgcaaacaaagttgatgatattatgtgatactcttaagtgttacactttttggggtgttacgtttaaaaca 16223040  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    ||  ||||| ||||||||||||||||||    
T  16223039 aggaaggat-aaaattagattaagtgta 16223013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 39099034 - 39099164
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||  || ||||||||| ||||| | |||||||||| ||| |||| | |||||||| | |||||||||  ||||||||||||||||     
T  39099034 tactattttatcgttgacatatttaacatgcaaacagagttgctgatatcatgcgatagtcttaagtgtgatactttgtgggatgttacacttaaaacag 39099133  T
Q  192 gataggataaaaattagattaagtgtattttt 223  Q
    | || ||| |||||||||||||||||||||||    
T  39099134 ggtaagat-aaaattagattaagtgtattttt 39099164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 43643509 - 43643635
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| || || |||||||||||| ||||| | ||| | ||||||||||||| | |||||||||||||||||||  ||||||| |||| ||||    
T  43643509 gtactattttattgtcggaatttttaacatgcaaacagagttgataatattatgtgatagtcttaagtgttacactttgtgaggtgttacgcttataaca 43643608  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| |||||||||| |||||||    
T  43643609 aggtaggat-aaaattagatcaagtgta 43643635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 1953901 - 1954029
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggag-tgttacacttaaaa 188  Q
    ||||||||||||||||||  |  ||||||||| ||||| | ||| |||| |||||||||| | |||||||||||||||||||| | ||||||||||||||    
T  1953901 ggtactattttatcgttgacaactttaacatgcaaacagagttgatgatgttatgtgatagtcttaagtgttacactttgtggggatgttacacttaaaa 1954000  T
Q  189 caagataggataaaaattagattaagtgta 218  Q
    |||| || ||| ||||||||||| ||||||    
T  1954001 caaggtatgat-aaaattagatttagtgta 1954029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 7890871 - 7890971
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| || || | ||| ||||||||||||||||| ||||||||||||| |||||| ||||||| |||| ||||    
T  7890871 gtactattttatcgttggaatctttaacatgcaaccagagttgatgatattatgtgataatcttaagtgttacacgttgtggggtgttacgcttataaca 7890970  T
Q  191 a 191  Q
    |    
T  7890971 a 7890971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 31933800 - 31933926
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||| ||  |||||||| ||||| | ||| ||||||||||||||||| |||||||||||||||||||  || |||  |||| ||||    
T  31933800 gtactattttattgttggaatccttaacatgcaaacagacttgatgatattatgtgataattttaagtgttacactttgtgcggtattatgcttataaca 31933899  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||||||||||||||    
T  31933900 aggtatgat-aaaattagattaagtgta 31933926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 43025972 - 43025850
Alignment:
Q  97 ttttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagatag 196  Q
    |||||||||||  || ||||||||| || || | ||| ||||||||||||||| | |||||||||||| ||||||| |||||||| |||||| ||| |||    
T  43025972 ttttatcgttgacatctttaacatgcaatcagagttgatgatattatgtgatagttttaagtgttacattttgtggggtgttacagttaaaataaggtag 43025873  T
Q  197 gataaaaattagattaagtgtatt 220  Q
    ||| ||||||||||||| ||||||    
T  43025872 gat-aaaattagattaaatgtatt 43025850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 30654496 - 30654597
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  |||||||||||| ||| | | ||  ||||||||||||||| | |||||||||||||||||| | ||||||| ||||||||    
T  30654496 ggtactattttatcgttgaaatttttaacatgcaaatagagtttatgatattatgtgatagtcttaagtgttacactttgtagggtgttacgcttaaaac 30654595  T
Q  190 aa 191  Q
    ||    
T  30654596 aa 30654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 34895238 - 34895117
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||| ||||||| || ||||||||| ||||| | ||| ||||||||||||||| |     |||||||| ||||||| ||||||||||| |||||    
T  34895238 gtactattttttcgttggcatctttaacatgcaaacagatttgatgatattatgtgatagt-----gtgttacattttgtggggtgttacacttgaaaca 34895144  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || | |||| ||||||||||||||||||    
T  34895143 aggttggat-aaaattagattaagtgta 34895117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 7998489 - 7998442
Alignment:
Q  173 agtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  7998489 agtgttacacttaaaacaaggtaggataaaaattagattaagtgtatt 7998442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 466053 - 465990
Alignment:
Q  156 agtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||||||||| ||||||||||||||||||  || ||| ||||||||||||||||||||    
T  466053 agtgttacactttgtggggtgttacacttaaaacaatgtaagat-aaaattagattaagtgtatt 465990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 23854344 - 23854471
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| || || || ||||||||| || || | ||| ||||||||||||||  | |||||||||||||||| ||  |||||||||||| |||    
T  23854344 ggtactattttattgtcggaatctttaacatgcaagcagagttgatgatattatgtgattgtcttaagtgttacactttatgcggtgttacacttataac 23854443  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
     || || ||| ||||||||||||| ||||    
T  23854444 taggtaagat-aaaattagattaattgta 23854471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 10555117 - 10555242
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| || || || ||||||||| ||||| | ||| |||||||||||||||   | |||||||||  ||||||  ||||| | |||| |||    
T  10555117 ggtactattttattgtcggaatctttaacatgcaaacaaagttgatgatattatgtgata--gtcaagtgttacgttttgtgaggtgttgcgcttataac 10555214  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  10555215 aaggtaggat-aaaattagattaagtgta 10555242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 1149834 - 1149911
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtgg 172  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||    | ||||||||||||||||||||    
T  1149834 gtactattttatcgttggaatctttaacatgcaaacaaagttgatgatattatgtg----tcttaagtgttacactttgtgg 1149911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 35459626 - 35459751
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||| || |  || ||||||||  ||||| ||||| ||||||||||| ||| | |||||||||| | | |||||  ||||||| ||| |||||    
T  35459626 tactattttattgtcgaaatctttaacatacaaacagaattgatgatattatgtaatagtcttaagtgttataatctgtgggatgttacatttataacaa 35459725  T
Q  192 gataggataaaaattagattaagtgta 218  Q
      |||||| ||||||||||||||||||    
T  35459726 agtaggat-aaaattagattaagtgta 35459751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 1150090 - 1150145
Alignment:
Q  162 acactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    ||||||||||| ||||||| |||| |||||| |||||| ||||||||||||||||||    
T  1150090 acactttgtggggtgttacgcttataacaaggtaggat-aaaattagattaagtgta 1150145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 34952026 - 34952073
Alignment:
Q  172 gagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  34952026 gagtgttacacttaaaacaaagtaggat-aaaattagattaagtgtatt 34952073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 12585348 - 12585297
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaa 186  Q
    |||| |||||||||| |||||||||||| | ||||||| |||||||||||||    
T  12585348 tgatgttatgtgatagtattaagtgttagattttgtggggtgttacacttaa 12585297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 5299711 - 5299745
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||| ||||||||||||||||||||||    
T  5299711 agggagcttctatggtgcagtcatgaaactgactt 5299745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 16446640 - 16446674
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||| |||||||||||    
T  16446640 agggagcttctacggtgcagtcaggaaactgactt 16446674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 7890723 - 7890756
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||| ||||||||||||||||    
T  7890723 gggagcttctacggtgcggtcatgaaactgactt 7890756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 38644402 - 38644369
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||| |||||||||||||||||||||||||    
T  38644402 gggagcttttacggtgcagtcatgaaactgactt 38644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 1149395 - 1149431
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  1149395 ttagggagcttctacggtgcagtcaggaaattgactt 1149431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 11727450 - 11727418
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgac 85  Q
    |||||||||||||||||||||||||||| ||||    
T  11727450 agggagcttctacggtgcagtcatgaaattgac 11727418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 33198229 - 33198193
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  33198229 ttagggagcttctacggtgcaatcatgaaattgactt 33198193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 34133204 - 34133075
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| ||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  34133204 ggtactattttatcgttggcatctttaacatgcaaacaaaattgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaac 34133105  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||| ||||||||||||    
T  34133104 aaggtaggat-aaaattatattaagtgtatt 34133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 44891766 - 44891637
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||  ||||| | |||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  44891766 ggtactattttatcgttgacatctttaacatacaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgtggagtgttacacttaaaac 44891667  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||||||||||||||    
T  44891666 aaggtaggat-aaaattagattaagtgtatt 44891637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 45174773 - 45174645
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||||||||| | |||||||||| || | ||| | |||||||||||||||||| ||||||||||||||||||||    
T  45174773 tactattttatcgttggcatctttaacatggaaacagagttgctgatatcatattatagtcttaagtgttacactttgtagagtgttacacttaaaacaa 45174674  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | |||||||||||||| ||||| ||||||    
T  45174673 ggtaggataaaaattaaattaaatgtatt 45174645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 33698422 - 33698293
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| | |||| ||||| ||| |||| | |||||||||||||||||||| ||||||||||||||||    
T  33698422 ggtactattttatcgttggcatctttaacatgcaaacagagttgccgatatcatgcgatagtcttaagtgttacactttgtggggtgttacacttaaaac 33698323  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||||||||||||||    
T  33698322 aaggtaggat-aaaattagattaagtgtatt 33698293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 46297671 - 46297801
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  46297671 tactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaacaa 46297770  T
Q  192 gataggataaaaattagattaagtgtattttt 223  Q
    | |||||| ||| || ||||||||||| ||||    
T  46297771 ggtaggat-aaagtttgattaagtgtagtttt 46297801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 11467093 - 11466964
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||| |||||||||| || |||||| ||||| | ||| |||||| |||||||| | |||||||||||||||||||| || |||||||||||||    
T  11467093 ggtactattttgtcgttggtatcttaaacatgcaaacagagttgttgatatcatgtgatagtcttaagtgttacactttgtggggtattacacttaaaac 11466994  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||||||||||||||    
T  11466993 aaggtaggat-aaaattagattaagtgtatt 11466964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 25580001 - 25579876
Alignment:
Q  97 ttttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagatag 196  Q
    |||||||||||| || ||||||||| ||||| | |||||||||| |||| ||| | |||||||||||||||||||| |||||||||| |||||||| |||    
T  25580001 ttttatcgttggcatctttaacatgcaaacagagttgctgatatcatgtaatagtcttaagtgttacactttgtggggtgttacactaaaaacaaggtag 25579902  T
Q  197 gataaaaattagattaagtgtattttt 223  Q
    ||| |||||||||||||||||||||||    
T  25579901 gat-aaaattagattaagtgtattttt 25579876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 36012409 - 36012277
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataa-ttgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaa 187  Q
    |||||||||||||||||||| || |||||||||||||||  | |||||||||| || ||||| | |||||||||||| |||||||  ||||||||| |||    
T  36012409 cggtactattttatcgttggcatctttaacatggaaacaagagttgctgatatcatttgatagtcttaagtgttacattttgtgggatgttacactgaaa 36012310  T
Q  188 acaagataggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||||||||| |||||||    
T  36012309 acaaggtaggataaaaattagattaggtgtatt 36012277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 52040830 - 52040956
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||| ||||| || ||||||||||||||    
T  52040830 gtactattttatcgttgacatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactatgtggggtattacacttaaaaca 52040929  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  52040930 aggtaggat-aaaattagattaagtgta 52040956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 39282919 - 39282794
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||| ||||  || ||||||| | ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||||    
T  39282919 tactattttattgttgacatctttaacaggcaaacatatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttgaaacaa 39282820  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | |||||| ||||||||||||||||||    
T  39282819 ggtaggat-aaaattagattaagtgta 39282794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 2008200 - 2008073
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||     
T  2008200 gtactattttatcgttgtcatctttaacatgcaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgtggagtg-tacacttaaaacg 2008102  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||| ||||    
T  2008101 aggtaggat-aaaattagattaagtatatt 2008073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 32373738 - 32373610
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||| ||| ||||| | |||||||||| |||||||| | |||||||| |||||||||||  ||||||||||||||||    
T  32373738 gtactattttatcgttgacatctttaatatgcaaacagagttgctgatatcatgtgatagtcttaagtgtcacactttgtgggatgttacacttaaaaca 32373639  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||||||||    
T  32373638 aggtaggat-aaaattagattaagtgtatt 32373610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 24708023 - 24708135
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||  | |||||||||||||||||||| ||||||||||| |||||    
T  24708023 gtactattttatcgttggcatctttaacatgcaaacaaatttgatgatattatgtgattgttttaagtgttacactttgtggggtgttacacttgaaaca 24708122  T
Q  191 agataggataaaa 203  Q
    || ||||||||||    
T  24708123 aggtaggataaaa 24708135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 46994568 - 46994695
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| || || || |||| |||| ||||||||||| ||||||||||||||| | |||||||||||| ||||||| | |||||||||| |||    
T  46994568 ggtactattttattgtcggaatctttagcatgcaaacataattgatgatattatgtgatagtcttaagtgttacattttgtggggcgttacacttataac 46994667  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  46994668 aaggtaggat-aaaattagattaagtgta 46994695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 35844572 - 35844466
Alignment:
Q  113 tttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagatta 212  Q
    ||||||||||||||| | || ||||||| |||||||| | |||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||    
T  35844572 tttaacatggaaacaaagttactgatatcatgtgata-tcttaagtgttacactttgtagggtgttacacttaaaactaggtaggataaaaattagatta 35844474  T
Q  213 agtgtatt 220  Q
    ||||||||    
T  35844473 agtgtatt 35844466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 54828609 - 54828735
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||| |||||||||||  ||||||| ||| ||||||||| ||||| | ||||||||||||||||||||  ||||||||||| || |    
T  54828609 gtactattttatagttggaatttttaacatacaaacatagttgatgatattatttgatagttttaagtgttacactttgtgggatgttacacttataata 54828708  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  54828709 aggtaggat-aaaattagattaagtgta 54828735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 22622626 - 22622757
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||  ||||| | ||| ||||||||||||||| | ||||||||||| |||||||| ||||||||||| |||||    
T  22622626 gtactattttatcgttgacatctttaacatccaaacagatttgatgatattatgtgatagtcttaagtgttacgctttgtggggtgttacacttgaaaca 22622725  T
Q  191 agataggataaaaattagattaagtgtattttt 223  Q
    || || ||| |||||||||||||||||| ||||    
T  22622726 aggtatgat-aaaattagattaagtgtagtttt 22622757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 37157976 - 37157849
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaaca-taattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| |||| || ||||||||  ||||| || ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||| |||     
T  37157976 gtactattttatcattggcatctttaacatacaaacaatatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttgaaat 37157877  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  37157876 aaggtaggat-aaaattagattaagtgta 37157849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 42505982 - 42506109
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || |||||||||  ||||   ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| | |    
T  42505982 ggtactattttatcgttggaatctttaacatgcgaacaacgttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttatagc 42506081  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  42506082 aaggtaggat-aaaattagattaagtgta 42506109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 53229064 - 53229186
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||||| | ||| ||||| ||||||||| | |||||||||||||||||||| | ||||||||||||| ||| |    
T  53229064 tattttatcgttggcatctttaacatgcaaacaaagttgatgatactatgtgatagtcttaagtgttacactttgtggggagttacacttaaaataaggt 53229163  T
Q  195 aggataaaaattagattaagtgta 218  Q
    ||||| ||||||||||||| ||||    
T  53229164 aggat-aaaattagattaactgta 53229186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 1089962 - 1089849
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggag-tgttacacttaaaac 189  Q
    |||||||||||||||||| || ||||||||| ||| | | ||| |||| |||||||||| | |||||||||||||||||||| | |||||||||||||||    
T  1089962 gtactattttatcgttggcatctttaacatgcaaatagagttgttgatgttatgtgatagtcttaagtgttacactttgtggggatgttacacttaaaac 1089863  T
Q  190 aagataggataaaa 203  Q
    ||| ||||||||||    
T  1089862 aaggtaggataaaa 1089849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 7327390 - 7327518
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||| | | ||| |||||| |||||||| | |||||||||||||||||||| ||||||||||  ||| |    
T  7327390 gtactattttatcgttggcatctttaacatgcaaatagagttgttgatatcatgtgatagtcttaagtgttacactttgtggggtgttacactagaaaga 7327489  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||||||||||| || ||||||||||||    
T  7327490 aggtaggataaaaa-taaattaagtgtatt 7327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 33378693 - 33378817
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| ||| |||||| |||| | |||||| ||||||||  ||| |||||||||||||||||    
T  33378693 gtactattttatcgttgacatctttaacatgcaaacatagttgatgagattatgcgatagtcttaagtattacacttcttggggtgttacacttaaaaca 33378792  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || |||||| ||||||||||||||||    
T  33378793 aggtaggat-aaaattagattaagtg 33378817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 43348525 - 43348397
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||| | | ||| |||||| |||||||| | |||||||| ||||||| |||  ||||||||||||||||    
T  43348525 gtactattttatcgttgacatctttaacatgcaaatagagttgttgatatcatgtgatagtcttaagtgtcacactttatgggatgttacacttaaaaca 43348426  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||||||||    
T  43348425 aggtaggat-aaaattagattaagtgtatt 43348397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 21009709 - 21009836
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||| ||  ||| ||||||||||||||| | |||||||||||||||||| ||||||||  |||| |||    
T  21009709 ggtactattttatcgttggaatctttaacatgcaaatattgttgatgatattatgtgatagtcttaagtgttacactttgtagagtgttatgcttagaac 21009808  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||| ||||||||||    
T  21009809 aagttatgat-aaaattatattaagtgta 21009836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 22445972 - 22446098
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||||||||||||||||||||| ||||| ||| ||| ||| ||| ||||||||| ||||| | || ||||||| || |||| ||||||||||||||||||    
T  22445972 ggtactattttatcgttggtatctttaatatgcaaaaatagttgatgatattatatgatagtcttgagtgttatacattgt-gagtgttacacttaaaac 22446070  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||  |||||| ||||||||||||||||||    
T  22446071 aatgtaggat-aaaattagattaagtgta 22446098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 26941168 - 26941294
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||| ||||| | |||||||||||||||| ||  || |||| |||| ||||    
T  26941168 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattatatgatagttttaagtgttacactttatgaggtattacgcttataaca 26941267  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  26941268 aggtaggat-aaaattagattaagtgta 26941294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 3362523 - 3362402
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||| ||||||||||||  || ||||||||| ||||| | ||| |||| |||||||||| | |||||||||||||||||||| ||||| ||||||||| |    
T  3362523 gtacaattttatcgttgacatctttaacatgcaaacagagttgatgatgttatgtgatagtcttaagtgttacactttgtggggtgtttcacttaaaata 3362424  T
Q  191 agataggataaaaattagattaa 213  Q
    || |||||| |||||||||||||    
T  3362423 aggtaggat-aaaattagattaa 3362402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 48355208 - 48355083
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||| || || || ||||||||| ||||| | ||| ||||||||||||||| | ||||||||||||||||||||  ||||||| ||| |||||    
T  48355208 tactattttattgtcggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggtatgttacatttataacaa 48355109  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | |||||| ||||||||| ||||||||    
T  48355108 ggtaggat-aaaattagactaagtgta 48355083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 4761555 - 4761683
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgt-ggagtgttacacttaaaa 188  Q
    ||||||||||||| || || || ||||||||| ||| ||| ||| ||||||||||||||| | |||||||||| ||||||| || |||||| ||||| ||    
T  4761555 ggtactattttattgtcggaatctttaacatgcaaatatagttgatgatattatgtgatagtcttaagtgttatactttgtgggggtgttatacttataa 4761654  T
Q  189 caagataggataaaaattagattaagtgta 218  Q
    |||| |||||| ||||||||||||||||||    
T  4761655 caaggtaggat-aaaattagattaagtgta 4761683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 29164077 - 29163958
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||| | || ||||||||| ||||| | |||||||||| ||||||         |||||||||||||||| |||||||||||||||||    
T  29164077 gtactattttatcgttagcatctttaacatgcaaacagagttgctgatatcatgtga---------gtgttacactttgtggggtgttacacttaaaaca 29163987  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||||||||    
T  29163986 aggtaggat-aaaattagattaagtgtatt 29163958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 37203337 - 37203209
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaaca-taattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    |||||||||||||| |||  || ||||||||  ||||| || ||| ||||||||||||||| | |||||||||||||||||||| ||| |||||| ||||    
T  37203337 ggtactattttatcattgacatctttaacatacaaacaatatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgatacactaaaaa 37203238  T
Q  189 caagataggataaaaattagattaagtgta 218  Q
     ||| |||||| ||||||||||||||||||    
T  37203237 taaggtaggat-aaaattagattaagtgta 37203209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 11835579 - 11835667
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtattttt 223  Q
    |||||| |||||||| | |||| ||||||||||||| |  |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  11835579 tgatatcatgtgatagtcttaattgttacactttgtaggttgttacacttaaaacaaggtaggataaatattagattaagtgtattttt 11835667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 20373152 - 20373263
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||| |||  | |||| |||| ||||    
T  20373152 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgatagttttaagtgttacactttatgggatattacgcttataaca 20373251  T
Q  191 agataggataaa 202  Q
    || |||||||||    
T  20373252 aggtaggataaa 20373263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 24488872 - 24488998
Alignment:
Q  93 actattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaag 192  Q
    |||||||||| ||||| || ||||||||| ||| | | ||| ||||||| ||||||| | ||||||||||||| |||||  ||||||||||||||||||     
T  24488872 actattttattgttggcatctttaacatgcaaatagagttgatgatattgtgtgatagtcttaagtgttacaccttgtgaggtgttacacttaaaacaat 24488971  T
Q  193 ataggataaaaattagattaagtgtatt 220  Q
     || ||| ||||||||||||||||||||    
T  24488972 gtaagat-aaaattagattaagtgtatt 24488998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 40552167 - 40552293
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||| |||  |||||||||||| ||||||  |||||| |||| ||||    
T  40552167 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgacaatcctaagtgttacacgttgtgggatgttacgcttataaca 40552266  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||| ||||||||||    
T  40552267 agctaagat-aaaattaaattaagtgta 40552293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 21193883 - 21193746
Alignment:
Q  84 acttacgg-tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatatt-aagtgttacactttgtggagtgttaca 181  Q
    |||||||| ||||||||||||||  | || ||||||||| ||||| | |||||||||| || ||||| | || ||||||||  |||| ||||||||||||    
T  21193883 acttacggctactattttatcgtgagaatctttaacatgcaaacagagttgctgatatcatatgatagtctttaagtgttatcctttatggagtgttaca 21193784  T
Q  182 cttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||| |||||| ||||||||||||| ||||||    
T  21193783 cttaaaacaaggtaggat-aaaattagattaaatgtatt 21193746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 54506074 - 54505949
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||| | | | | ||||||||||||||| | |||||||||||||||||| ||||||||  |||| |||||    
T  54506074 tactattttatcgttggaatctttaacatgcaaataaagtagatgatattatgtgatagtcttaagtgttacactttgtagagtgttatgcttagaacaa 54505975  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | || ||| ||||||| ||||||||||    
T  54505974 ggtatgat-aaaattatattaagtgta 54505949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 3655114 - 3655238
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||| ||| || ||||||||| ||||| |  || |||||| |||||||| | |||||||||||| ||||||| ||||||| |||  |||||| |    
T  3655114 tattttatcgatggaatctttaacatgcaaacagagctgatgatatcatgtgatagttttaagtgttacattttgtggtgtgttacgcttctaacaaggt 3655213  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||||||||||    
T  3655214 aggat-aaaattagattaagtgtatt 3655238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 14586579 - 14586706
Alignment:
Q  83 gacttacggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacac 182  Q
    ||||||| |||||||||||||||||| || ||||||||| ||||||| ||| |||||| ||  ||         |||||||||||||||| |||||||||    
T  14586579 gacttaccgtactattttatcgttggcatctttaacatgcaaacatagttgttgatatcatacga---------gtgttacactttgtggggtgttacac 14586669  T
Q  183 ttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||||||| |||||| ||| ||||||||||||||||    
T  14586670 ttaaaacaaggtaggat-aaagttagattaagtgtatt 14586706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 11357289 - 11357365
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    ||||||||||||||||||||| ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||    
T  11357289 gtactattttatcgttggtatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactt 11357365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 38591965 - 38591840
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    |||| |||||||||||  || ||| ||||| ||| | | ||| ||||||||||||||| | |||||||| ||  ||||||| || |||||||| ||||||    
T  38591965 tacttttttatcgttgtcatctttgacatgcaaatagatttgatgatattatgtgatagtcttaagtgtcacgttttgtggggtattacacttgaaacaa 38591866  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    |||||||| ||||||||||||||||||    
T  38591865 gataggat-aaaattagattaagtgta 38591840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 22451236 - 22451112
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||  || ||||||||| ||||||| ||| |||||||||  |||| | |||| ||||||||||  ||| |||||||||||||||||    
T  22451236 gtactattttattgttgacatctttaacatgcaaacatagttgatgatattatacgatagtgttaaatgttacacttactggggtgttacacttaaaaca 22451137  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || || | | ||||||||||||||||    
T  22451136 aggtaaggt-aaaattagattaagtg 22451112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 4015727 - 4015616
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||| |||||| || ||||||||| ||||| | ||| |||||  ||| |||| | |||||||| ||||||||||| |||||||||||||||||    
T  4015727 gtactattttaccgttggcatctttaacatgcaaaca-agttgttgatacaatgcgatagtcttaagtgtgacactttgtggggtgttacacttaaaaca 4015629  T
Q  191 agataggataaaa 203  Q
    |  ||||||||||    
T  4015628 atgtaggataaaa 4015616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 43975800 - 43975920
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaaca---taattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaa 187  Q
    |||||||||||||||||| || ||||||||| |||||   || ||| |||||||||| ||||       |||||||||||| ||| ||||||||||||||    
T  43975800 gtactattttatcgttggcatctttaacatgtaaacaacatagttgatgatattatgcgata-------gtgttacactttctggggtgttacacttaaa 43975892  T
Q  188 acaagataggataaaaattagattaagtg 216  Q
    |||||||| ||| ||||||||||||||||    
T  43975893 acaagataagat-aaaattagattaagtg 43975920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 53176282 - 53176196
Alignment:
Q  131 ttgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    |||||||||| |||||||| | ||||||||||||||||||||||||||| | ||||||  || | |||| ||||||||||||||||||    
T  53176282 ttgctgatatcatgtgatagtcttaagtgttacactttgtggagtgttatatttaaaatgaggttggat-aaaattagattaagtgta 53176196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 51212955 - 51213015
Alignment:
Q  157 gtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    |||||||||||||||| |||||||||||| |||||| |||||| ||||||| ||||||||||    
T  51212955 gtgttacactttgtggggtgttacacttataacaaggtaggat-aaaattatattaagtgta 51213015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 29099766 - 29099730
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||||||||||||    
T  29099766 ttagggagcttctacggtgcagtcatgaaactgactt 29099730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 40936241 - 40936165
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    |||||||||||||||||| || ||||||||| ||||  | ||||| |||| |||||||| | |||||||||||||||    
T  40936241 gtactattttatcgttggcatctttaacatgcaaacggagttgctaatatcatgtgatagtcttaagtgttacactt 40936165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 44186485 - 44186540
Alignment:
Q  167 ttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtattttt 223  Q
    |||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  44186485 ttgtggggtgttacatttaaaacaaggtaggataaaa-ttagattaagtgtattttt 44186540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 29099615 - 29099495
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||| | || ||||||||| ||||| | |||||||||| |||||| |         |||||||||||||| |||||||||||||||     
T  29099615 ggtactattttatcgttagcatctttaacatgcaaacagagttgctgatatcatgtgaaa---------gttacactttgtggggtgttacacttaaaat 29099525  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    |||  | ||| ||||||| ||||||||||||    
T  29099524 aaggcacgat-aaaattaaattaagtgtatt 29099495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 36012557 - 36012523
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||||||||||    
T  36012557 agggagcttctacggtgcagtcatgaaactgactt 36012523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 4015875 - 4015842
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||||||||||||    
T  4015875 gggagcttctacggtgcagtcatgaaactgactt 4015842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 21194023 - 21193990
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||||||||||||    
T  21194023 gggagcttctacggtgcagtcatgaaactgactt 21193990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 47481790 - 47481702
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgtta 179  Q
    |||||||||||||||||  || ||||| ||| ||| | | ||  ||||||||||||||| | |||||||||||||||||| | ||||||    
T  47481790 gtactattttatcgttgaaatctttaatatgcaaatagagtttatgatattatgtgatagtcttaagtgttacactttgtagggtgtta 47481702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 11467228 - 11467193
Alignment:
Q  52 tagggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||| ||||||||||    
T  11467228 tagggagcttctacggtgcagtcatcaaactgactt 11467193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 27480270 - 27480350
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataa----ttgctgatattatgtgataatattaagtgttacactt 167  Q
    |||||||||||||||||| || ||||||||| |||||||     ||| |||||||||| |||| | |||||||||||||||    
T  27480270 gtactattttatcgttggcatctttaacatgcaaacatatatagttgatgatattatgcgatagtcttaagtgttacactt 27480350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 37158126 - 37158091
Alignment:
Q  52 tagggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||| |||||||||||    
T  37158126 tagggagcttctacggtgcagtcaggaaactgactt 37158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 37203485 - 37203451
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||| |||||||||||    
T  37203485 agggagcttctacggtgcagtcaggaaactgactt 37203451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 33378545 - 33378578
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||| |||||||||||    
T  33378545 gggagcttctacggtgcagtcaggaaactgactt 33378578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 11357059 - 11357139
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtgg 172  Q
    |||||||||||| |||| || ||||||||  || || | ||| ||||||||| ||||| | || |||||||||||||||||    
T  11357059 tactattttatcattggcatatttaacatacaaccagagttgatgatattatatgatagtcttgagtgttacactttgtgg 11357139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 39283067 - 39283035
Alignment:
Q  55 ggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||| |||||||||||    
T  39283067 ggagcttctacggtgcagtcaggaaactgactt 39283035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 36642267 - 36642135
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    |||||||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||| | |||||||||||||||||| | |||||||||||||||    
T  36642267 cggtactattttatcgttggcatctttaacatggaaacagagttgctggtatcatgtgatagtcttaagtgttacactttgtagggtgttacacttaaaa 36642168  T
Q  189 caagataggata-aaaattagattaagtgtatt 220  Q
    |||| ||||||| ||||||||||||||||||||    
T  36642167 caaggtaggataaaaaattagattaagtgtatt 36642135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 3177216 - 3177088
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||  || ||||||||| ||||||| ||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  3177216 gtactattttatagttgacatctttaacatgcaaacatagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaaca 3177117  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || || ||| ||||||||||||||||||||    
T  3177116 aggtaagat-aaaattagattaagtgtatt 3177088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 17071662 - 17071789
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||||||     
T  17071662 ggtactattttatcgttggaatctttaacatgcaaacaaatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttaaaat 17071761  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  17071762 aaggtaggat-aaaattagattaagtgta 17071789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 41961118 - 41960991
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||| |||||||||||||| || ||||||||| ||||  | ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  41961118 ggtattattttatcgttggcatctttaacatgcaaaccgatttgatgatattatgtgataatcttaagtgttacactttgtggggtgttacacttgaaac 41961019  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  41961018 aaggtaggat-aaaattagattaagtgta 41960991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 4167195 - 4167071
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||  ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  4167195 tattttatcgttgacatctttaacatacaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacacttaaaacaaggt 4167096  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||| ||||||    
T  4167095 aggat-aaaattagattaaatgtatt 4167071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 2325303 - 2325430
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||||||     
T  2325303 ggtactattttatcgttgtaatctttaacatgcaaacaaatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttaaaat 2325402  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  2325403 aaggtaggat-aaaattagattaagtgta 2325430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 17054021 - 17054147
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| |  ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||||||     
T  17054021 ggtactattttatcgttggaacctttaacatgcaaacaaatttgatgatattatgtgatagtnttaagtgttacactttgtggggtgttacgcttaaaat 17054120  T
Q  190 aagataggataaaaattagattaagtgt 217  Q
    ||| |||||| |||||||||||||||||    
T  17054121 aaggtaggat-aaaattagattaagtgt 17054147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 41465778 - 41465655
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||||||||| |||||||||| |||| | |||||||||||||||| ||  |||||||||||||||||    
T  41465778 gtactattttatcgttggcatctttaacatgcaaacataattgatgatattatgcgatagtcttaagtgttacactttctgaggtgttacacttaaaaca 41465679  T
Q  191 agataggataaaaattagattaagt 215  Q
    || ||| || |||||||||||||||    
T  41465678 aggtagaat-aaaattagattaagt 41465655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 44286225 - 44286098
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||| | || ||||||||| ||||| | ||| |||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  44286225 tactattttatcgttagcatatttaacatgcaaacaaagttgttgatatcatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaacaa 44286126  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | ||| || ||||||||||||||||||||    
T  44286125 ggtagaat-aaaattagattaagtgtatt 44286098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 4264002 - 4264131
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgt-gataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||||||||||| ||||| || ||||||||| ||||| | |||||||||| |||| |||| | |||||||||||||||||||| |||||| |||||||||    
T  4264002 gtactattttattgttggcatctttaacatgcaaacagagttgctgatatcatgttgatagtcttaagtgttacactttgtggggtgttaaacttaaaac 4264101  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||||||||||||||    
T  4264102 aaggtaggat-aaaattagattaagtgtatt 4264131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 44913941 - 44913812
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgt-ggagtgttacacttaaaac 189  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||| || ||||||||||||||||    
T  44913941 gtactattttatcgttggcatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtgggggtgttacacttaaaac 44913842  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||  || ||| ||||||||||||||||||||    
T  44913841 aatgtatgat-aaaattagattaagtgtatt 44913812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 4763909 - 4763777
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||| | || ||||||||| ||| | ||||| ||||||||||||||| | |||||||||||||||||||| ||| ||||||| ||||    
T  4763909 ggtactattttatcgttagcatctttaacatgcaaaaagaattgatgatattatgtgatagtcttaagtgttacactttgtggggtgctacacttgaaac 4763810  T
Q  190 aagataggataaaaattagattaagtgtattttt 223  Q
    ||| ||| || |||||||||||||||||| ||||    
T  4763809 aaggtagaat-aaaattagattaagtgtagtttt 4763777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 4478641 - 4478518
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    |||||||||||| |||| || ||||||||||||||| | ||| |||||| ||||||||   |||||||||||||||||||     |||||||||||||||    
T  4478641 tactattttatcattggcatctttaacatggaaacagagttggtgatatcatgtgatagacttaagtgttacactttgtg-----ttacacttaaaacaa 4478547  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | |||||||||||||||||||||||||||    
T  4478546 ggtaggataaaaattagattaagtgtatt 4478518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 26357853 - 26357729
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||| | ||||||||||||| | |||||||||||| |||||||  |||||||||| ||||||    
T  26357853 tactattttatcgttggcatctttaacatgcaaacacatttgataatattatgtgatagttttaagtgttacaatttgtgggatgttacacttgaaacaa 26357754  T
Q  192 gataggataaaaattagattaagtgt 217  Q
    | |||||| |||||||||||||||||    
T  26357753 ggtaggat-aaaattagattaagtgt 26357729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 29242063 - 29242195
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||| ||||||||  || ||||||||  || || | ||| ||||||||||||||| | ||| |||||||||||||||| ||||||||||||||||    
T  29242063 ggtactattgtatcgttgacatctttaacatacaaccagagttgatgatattatgtgatagtcttaggtgttacactttgtggggtgttacacttaaaac 29242162  T
Q  190 aagataggataaaaattagattaagtgtattttt 223  Q
    ||| |||||| |||||||||||||||||| ||||    
T  29242163 aaggtaggat-aaaattagattaagtgtagtttt 29242195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 31570660 - 31570788
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| |||||| |||||| | | |||||||||||| ||||||| |||||||||||||||||    
T  31570660 gtactattttatcgttggcatctttaacatgtaaacagagttgttgatatcatgtgacagtcttaagtgttacattttgtggggtgttacacttaaaaca 31570759  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    |  || ||| ||||||||||||||||||||    
T  31570760 atgtaagat-aaaattagattaagtgtatt 31570788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 18258214 - 18258341
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||| | | |||||||||| |||||||| | |||||||||||||||| ||| ||||||||||||||| ||    
T  18258214 tactattttatcgttgggatctttaacatgcaaagagagttgctgatatcatgtgatagtcttaagtgttacactttatggggtgttacacttaaaaaaa 18258313  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
      |||||| ||||||||||||||| ||||    
T  18258314 tgtaggat-aaaattagattaagtttatt 18258341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 218
Target Start/End: Original strand, 43648174 - 43648297
Alignment:
Q  94 ctattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaaga 193  Q
    ||||||||||||||  || ||||||||||||||| | ||| ||||||||||||||| | |||||||||| ||||||||  |||||||||||| ||||||     
T  43648174 ctattttatcgttgaaatctttaacatggaaacaaagttgatgatattatgtgatagtcttaagtgttatactttgtgtggtgttacacttataacaagg 43648273  T
Q  194 taggataaaaattagattaagtgta 218  Q
    || ||| ||||||||||||||||||    
T  43648274 tatgat-aaaattagattaagtgta 43648297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 35959173 - 35959062
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| ||||||||||||||| | |||| ||||||||||||||| ||||||| |||| ||||    
T  35959173 gtactattttatcgttgaaatctttaacatgcaaacatagttgatgatattatgtgatagtcttaactgttacactttgtggggtgttacgcttataaca 35959074  T
Q  191 agataggataaa 202  Q
    || |||||||||    
T  35959073 aggtaggataaa 35959062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 33709158 - 33709286
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| |||  || ||||||||| ||||| | |||||||||| ||| |||| | |||||||| ||||||||| | |||||||||||||||||    
T  33709158 gtactattttatcattgacatctttaacatgcaaacagagttgctgatatcatgcgatagtcttaagtgtgacactttgtagggtgttacacttaaaaca 33709257  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| |||||||||||||| |||||    
T  33709258 aggtaggat-aaaattagattaagcgtatt 33709286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 45327997 - 45327873
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||  |||||||||| |||| | ||| |||||||||||| ||  |||||||||||||||||    
T  45327997 gtactattttatcgttgacatctttaacatgcaaacatagtttatgatattatgcgatagtcttatgtgttacactttctgaggtgttacacttaaaaca 45327898  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || |||||| ||||||||||||||||    
T  45327897 aggtaggat-aaaattagattaagtg 45327873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 19424576 - 19424682
Alignment:
Q  113 tttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagatta 212  Q
    ||||||||| ||||| | |||||||||| |||||||| | |||| ||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||    
T  19424576 tttaacatgcaaacagagttgctgatatcatgtgatagtcttaaatgttacactttgtggggtgttacacttaaaacaaggtaagat-aaaattagatta 19424674  T
Q  213 agtgtatt 220  Q
    || |||||    
T  19424675 agcgtatt 19424682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 33550913 - 33551038
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| |||||||||  | || | |||||||||||||||||||| ||||||| |||||||||    
T  33550913 gtactattttatcgttgaaatctttaacatgcaaacatagttgatgatattatacg-tagtcttaagtgttacactttgtggggtgttacgcttaaaaca 33551011  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    |  |||||| ||||||||||||||||||    
T  33551012 acgtaggat-aaaattagattaagtgta 33551038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 33902319 - 33902231
Alignment:
Q  115 taacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaa 203  Q
    ||||||||||||| | ||  ||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  33902319 taacatggaaacagagttaatgatattatgtgatactattaagtgttacactttgtggggtgctacccttaaaacaaggtaggataaaa 33902231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 19314121 - 19314000
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||| ||  || ||||||||| ||||||| |||||||||| ||||||||       |||||||||||||||| |||||||||||||||||    
T  19314121 gtactattttatcgctgacatctttaacatgcaaacatagttgctgatatcatgtgata-------gtgttacactttgtggggtgttacacttaaaaca 19314029  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||| | |||||| |||||||||||||    
T  19314028 aggtagggt-aaaattcgattaagtgtatt 19314000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 31862129 - 31862003
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| || || ||  |||||||| ||||| | ||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||    
T  31862129 gtactattttattgtcggaatccttaacatgcaaacagacttgatgatattatgtgataattttaagtgttacactttgtggggtgttacgcttataaca 31862030  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    |  || | | ||||||||||||||||||    
T  31862029 atgtatg-ttaaaattagattaagtgta 31862003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 19289248 - 19289375
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||| |||||||| || || || ||||||||| | ||| | ||| ||||||||||||||| | ||||||||||||||||||||  ||||||| ||| |||    
T  19289248 ggtattattttattgtcggaatctttaacatgcacacagagttgatgatattatgtgatagtcttaagtgttacactttgtgggatgttacatttataac 19289347  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||  |||||| ||||||||||||||||||    
T  19289348 aatgtaggat-aaaattagattaagtgta 19289375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 33660304 - 33660422
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||  || ||||||||| ||||| | |||||||||| |||||          |||||||||||||||| ||||||||||||||||||    
T  33660304 tactattttatcgttgacatctttaacatgcaaacaaagttgctgatatcatgtgg---------gtgttacactttgtggggtgttacacttaaaacaa 33660394  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | |||||| ||||||||||||||||||||    
T  33660395 ggtaggat-aaaattagattaagtgtatt 33660422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 37905983 - 37905857
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgt--ggagtgttacacttaaaacaag 192  Q
    ||||||||| |||| || ||||||||| ||||| | ||  |||||||||| |||| | ||||||||||||||||||  || ||||||| |||| ||||||    
T  37905983 tattttatcattggaatctttaacatgcaaacagagttaatgatattatgcgatagttttaagtgttacactttgtggggggtgttacgcttataacaag 37905884  T
Q  193 ataggataaaaattagattaagtgtatt 220  Q
     |||||| ||||||||||||||||||||    
T  37905883 gtaggat-aaaattagattaagtgtatt 37905857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 11366306 - 11366419
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||| | ||||||   ||| |||    
T  11366306 ggtactattttatcgttgaaatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttatgtttagaac 11366405  T
Q  190 aagataggataaaa 203  Q
    |||||| |||||||    
T  11366406 aagatatgataaaa 11366419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 18494207 - 18494334
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | | | |||||| |||||||| | |||||||| || |||||| |||  |||||||||| |||    
T  18494207 gtactattttatcgttggcatctttaacatgcaaacagagtcgttgatatcatgtgatagtcttaagtgtgactctttgt-gaggtttacacttaataca 18494305  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| |||||||||| |||||||||    
T  18494306 aggtaggat-aaaattagatcaagtgtatt 18494334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 7006864 - 7006940
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    |||||||||||||||||| || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||    
T  7006864 gtactattttatcgttggcatctttaacatgcaaacagagttgctgatatcatgtgatattcttaagtgttacactt 7006940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 27349930 - 27349993
Alignment:
Q  156 agtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||    
T  27349930 agtgttacactttgtggggtgttacacttaaaacaaggttggat-aaaattagattaagtgtatt 27349993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 39167295 - 39167417
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||  ||||| | ||| ||||||||||||||| |      |||||||||||||||  ||||||||||||||||    
T  39167295 gtactattttatcgttgacatctttaacatacaaacagagttgatgatattatgtgatagt------tgttacactttgtgggatgttacacttaaaaca 39167388  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||  || ||||||||| ||||||||||    
T  39167389 aggtataat-aaaattagaataagtgtatt 39167417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 13711737 - 13711632
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||| ||| || ||||||||| | ||| | |||||||||| |||| ||| | |||| | ||| ||||| ||| ||||||||||||||||    
T  13711737 ggtactattttatcgctggcatctttaacatgcatacagagttgctgatatcatgtcatagtcttaactattatactttatggggtgttacacttaaaac 13711638  T
Q  190 aagata 195  Q
    | ||||    
T  13711637 atgata 13711632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 41463779 - 41463876
Alignment:
Q  94 ctattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||  || ||||||||| ||||| | ||| |||||| |||||||| | |||| ||||||| ||||||  |||||||| |||||||||    
T  41463779 ctattttatcgttgacatctttaacatgcaaacagagttgttgatatcatgtgatagtcttaaatgttacattttgtgaggtgttacaattaaaacaa 41463876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 43770775 - 43770893
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||| ||||| || ||||||||| ||||| | |||||||||| ||||||         |||||||||||||||  ||||||||||||||||||    
T  43770775 tactattttattgttggcatctttaacatgcaaacagagttgctgatatcatgtga---------gtgttacactttgtgaggtgttacacttaaaacaa 43770865  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    |  ||||| ||||||| ||||||| ||||    
T  43770866 ggcaggat-aaaattaaattaagtatatt 43770893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 33660154 - 33660188
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||||||||||    
T  33660154 agggagcttctacggtgcagtcatgaaactgactt 33660188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 27349728 - 27349764
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27349728 ttagggagcttctacagtgcagtcatgaaactgactt 27349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 7006929 - 7006975
Alignment:
Q  173 agtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||    
T  7006929 agtgttacacttaaaacaaggtatgat-aaaattagattaagtgtatt 7006975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 5881806 - 5881688
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||  || ||||||||| ||||| ||||| |||||| ||||||         |||||||||||||||  || ||||||||||||||    
T  5881806 gtactattttattgttgacatctttaacatgcaaacaaaattgttgatatcatgtga---------gtgttacactttgtgaggtattacacttaaaaca 5881716  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || || |||  |||||||||||| ||||||    
T  5881715 aggtatgat--aaattagattaaatgtatt 5881688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 82
Target Start/End: Original strand, 5874574 - 5874603
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaact 82  Q
    ||||||||||||||||||||||||||||||    
T  5874574 agggagcttctacggtgcagtcatgaaact 5874603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 19424420 - 19424453
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||| ||||||||||    
T  19424420 gggagcttctacggtgcagtcatcaaactgactt 19424453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 19500841 - 19500922
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtgg 172  Q
    ||||||||||||||||   || ||||||||| ||| | | ||| | ||||||||||||| | |||||||||||| |||||||    
T  19500841 gtactattttatcgttaacatctttaacatgtaaatagagttgataatattatgtgatagtcttaagtgttacattttgtgg 19500922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 9355735 - 9355861
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  9355735 gtactattttatcgttggcatctttaacatgcaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacacttaaaaca 9355834  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || ||||||  |||||||||||||||||    
T  9355835 aggtaggat-gaaattagattaagtgta 9355861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 6546772 - 6546643
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||  ||||| | |||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  6546772 ggtactattttatcgttggcatctttaacatacaaacagagttgctgatatcatgtgataatattaagtgttatactttgtggggtgttacacttaaaac 6546673  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||||||| ||||||    
T  6546672 aaggtaggat-aaaattagattaaatgtatt 6546643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 21991889 - 21991760
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||||    
T  21991889 ggtactattttatcgttgacatctttaacatgcaaacaaagttgctgatatcatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaac 21991790  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||||||||||||||    
T  21991789 aaggtaggat-aaaattagattaagtgtatt 21991760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 15612667 - 15612796
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||||||||||||| |||| || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||||    
T  15612667 ggtactattttatcattggcatctttaacatgcaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaac 15612766  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||| ||||||||||||    
T  15612767 aaggtaggat-aaaattaaattaagtgtatt 15612796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 15672675 - 15672799
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||  ||| | | ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |    
T  15672675 tattttatcgttggcatctttaacattcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtggagtgttacacttaaaacaaggt 15672774  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||||||||||    
T  15672775 aggat-aaaattagattaagtgtatt 15672799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 27283997 - 27283873
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||| | ||||||||||||| | |||||||||||||||||||| |||||||||||| |||    
T  27283997 ggtactattttatcgttggaatctttaacatgcaaacatagttgataatattatgtgatagttttaagtgttacactttgtggggtgttacacttataac 27283898  T
Q  190 aagataggataaaaattagattaagt 215  Q
    ||| |||||| |||||||||||||||    
T  27283897 aaggtaggat-aaaattagattaagt 27283873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 38258798 - 38258673
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| |||    
T  38258798 ggtactattttatcgttggaatctttaacatgcaaacaaagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttataac 38258699  T
Q  190 aagataggataaaaattagattaagtg 216  Q
    ||| |||||| ||||||||||||||||    
T  38258698 aaggtaggat-aaaattagattaagtg 38258673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 43686288 - 43686164
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||  ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  43686288 tattttatcgttgacatctttaacatacaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacacttaaaacaaggt 43686189  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||| ||||||    
T  43686188 aggat-aaaattagattaaatgtatt 43686164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 5657390 - 5657521
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||||| |||||||||| ||| |||| | |||||| |||||||||||||  ||||||||||||||||    
T  5657390 gtactattttatcgttggcatctttaacatgcaaacatagttgctgatatcatgcgatagtcttaagtattacactttgtgggctgttacacttaaaaca 5657489  T
Q  191 agataggataaaaattagattaagtgtattttt 223  Q
    |  |||||| ||||||| |||||||||||||||    
T  5657490 aagtaggat-aaaattaaattaagtgtattttt 5657521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 23111444 - 23111316
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||||||| ||| ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||||||||    
T  23111444 gtactattttatcgttgttatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttaaaaca 23111345  T
Q  191 agataggata-aaaattagattaagtgta 218  Q
    |  || |||| ||||||||||||||||||    
T  23111344 aagtatgatataaaattagattaagtgta 23111316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 37703408 - 37703533
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||  || ||||||||| ||||||| ||| ||||||||||||||| | ||||||| ||||||||||||  |||||||||||||| ||    
T  37703408 tactattttatcgttgacatctttaacatgcaaacatagttgatgatattatgtgatagtcttaagtggtacactttgtgggatgttacacttaaaataa 37703507  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    |||| ||| ||||||||||||||||||    
T  37703508 gatatgat-aaaattagattaagtgta 37703533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 41764987 - 41765111
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||| |||||||| || ||||||||| ||||||| ||| ||||||||||||||| | |||||||||||||||| ||| |||||||||||||||||    
T  41764987 gtactatttcatcgttggcatctttaacatgcaaacatagttgatgatattatgtgatagtcttaagtgttacactttctggggtgttacacttaaaaca 41765086  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || || ||  ||||||||||||||||    
T  41765087 aggta-gagtaaaattagattaagtg 41765111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 18797580 - 18797453
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| || || || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||  |||||||||||| |||    
T  18797580 ggtactattttattgtcggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtgaggtgttacacttataac 18797481  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  18797480 aaggtaggat-aaaattagattaagtgta 18797453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 4583167 - 4583043
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    ||||| |||||||  || ||||||||  ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||  |    
T  4583167 tatttgatcgttgacatctttaacatacaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacacttaaaacaaagt 4583068  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||| ||||||    
T  4583067 aggat-aaaattagattaaatgtatt 4583043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 8861537 - 8861409
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||||||||||| ||||||||| ||| | | |||||||||| |||||||  | || |||||||||||||| || ||||||||||||||| |    
T  8861537 gtactattttatcgttggtatctttaacatgcaaagagagttgctgatatcatgtgatggtcttgagtgttacactttgcggggtgttacacttaaaata 8861438  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||| ||||||    
T  8861437 aggtaggat-aaaattagattaaatgtatt 8861409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 32820962 - 32821074
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| |||||||||| |||| | |||||||||||||||| ||| ||||||| |||||||||    
T  32820962 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgcgatagtcttaagtgttacactttatggggtgttacgcttaaaaca 32821061  T
Q  191 agataggataaaa 203  Q
    || ||||||||||    
T  32821062 aggtaggataaaa 32821074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 11071456 - 11071336
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||| |||||||||||||   | |||||||||  |||| | ||| ||||||||||||||||| |||||||||||||||||||| || |||||||||||||    
T  11071456 ggtattattttatcgttg---tctttaacatgcgaacaaagttgatgatattatgtgataatcttaagtgttacactttgtggggtattacacttaaaac 11071360  T
Q  190 aagataggataaaaattagattaag 214  Q
    ||| |||||| ||||||||||||||    
T  11071359 aaggtaggat-aaaattagattaag 11071336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 37347272 - 37347148
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    |||||||||||| |||| || ||||||||| ||||| | ||| |||||||||||| || | ||||||||||||||||||||||| |||||||||||||||    
T  37347272 tactattttatcattggcatctttaacatgcaaacagagttgatgatattatgtggtagtcttaagtgttacactttgtggagt-ttacacttaaaacaa 37347174  T
Q  192 gataggataaaaattagattaagtgta 218  Q
      || ||| ||||||||||||||||||    
T  37347173 tgtatgat-aaaattagattaagtgta 37347148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 32432704 - 32432576
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||| ||| |||||   ||| ||||||||||||||| | |||||||||||| ||||||| ||||||||||||||| |    
T  32432704 gtactattttatcgttggcatctttaatatgcaaacagtgttgatgatattatgtgatagtcttaagtgttacattttgtggggtgttacacttaaaata 32432605  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||| ||||| ||||||    
T  32432604 aggtaggat-aaaattatattaactgtatt 32432576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 37704387 - 37704283
Alignment:
Q  113 tttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagatta 212  Q
    ||||||||| ||||| | ||| ||||||||| ||||| | |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||    
T  37704387 tttaacatgcaaacagagttgatgatattatatgatagtcttaagtgttacactttgtggggtgttacacttaaaacaaggtaggat-aaaattaaatta 37704289  T
Q  213 agtgta 218  Q
    ||||||    
T  37704288 agtgta 37704283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 44598914 - 44598790
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||| ||||| | ||| |||||| |||||||| | ||| |||||||||||||||| ||||||||||||||||||| |    
T  44598914 tattttatcgttgtcatctttaacatgcaaacagagttgttgatatcatgtgatagtcttaggtgttacactttgtggggtgttacacttaaaacaaggt 44598815  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    || || ||||||||||||| ||||||    
T  44598814 agaat-aaaattagattaaatgtatt 44598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 48928206 - 48928330
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||| |||||||| |||||||||||| ||||||| ||| |||||||||| |||| | |||||  ||||||||| ||  |||||||||||||||||    
T  48928206 gtactatttcatcgttggcatttttaacatgcaaacatagttgatgatattatgcgatagtcttaagcattacactttctgaggtgttacacttaaaaca 48928305  T
Q  191 agataggataaaaattagattaagtg 216  Q
    |  |||||| ||||||||||||||||    
T  48928306 atgtaggat-aaaattagattaagtg 48928330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 48928473 - 48928597
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| |||||||||||| ||||||| ||| |||||||||| |||| | |||||  ||||||||| ||  ||||||||||||||| |    
T  48928473 gtactattttatcgttggcatttttaacatgcaaacatagttgatgatattatgcgatagtcttaagcattacactttctgaggtgttacacttaaaata 48928572  T
Q  191 agataggataaaaattagattaagtg 216  Q
    |  |||||| ||||||||||||||||    
T  48928573 atgtaggat-aaaattagattaagtg 48928597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 7335046 - 7334920
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| || || || ||||||||  |||| || ||| ||||||||| ||||||| |||||||||||||| ||||| |||||||||||| |||    
T  7335046 ggtactattttattgtcggaatctttaacattcaaac-tagttgatgatattatctgataatcttaagtgttacactctgtggggtgttacacttataac 7334948  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  7334947 aaggtaggat-aaaattagattaagtgta 7334920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 10481866 - 10481735
Alignment:
Q  83 gacttacgg-tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttaca 181  Q
    ||||||||| ||||||||||| ||||| || ||| ||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||||| ||||||||    
T  10481866 gacttacggatactattttattgttggaatctttgacatgcaaagagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttaca 10481767  T
Q  182 cttaaaacaagataggataaaaattagattaag 214  Q
    |||| |||||| || ||| ||||||||||||||    
T  10481766 cttataacaaggtaagat-aaaattagattaag 10481735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 25691457 - 25691584
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    ||||||||||||   || |||||| || ||||| | |||||||||| |||||||| | |||||||| ||||||||||| ||||||||||||||| ||| |    
T  25691457 tattttatcgttaacatctttaacgtgcaaacagagttgctgatatcatgtgatagtcttaagtgtgacactttgtggggtgttacacttaaaataaggt 25691556  T
Q  195 aggataaaaattagattaagtgtattttt 223  Q
    ||||| ||||||||||||| |||||||||    
T  25691557 aggat-aaaattagattaaatgtattttt 25691584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 30055780 - 30055653
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || |||||||||  ||||   ||| ||||||||||||||| | |||||||||||||||||| | ||||||| |||| | |    
T  30055780 ggtactattttatcgttggaatctttaacatgcgaacaacgttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttacgcttatagc 30055681  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  30055680 aaggtaggat-aaaattagattaagtgta 30055653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 31578977 - 31579099
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||| | | |||||| ||||| |||||| |    
T  31578977 tattttatcgttggaatctttaacatgcaaataaagttgatgatattatgtgatagtcttaagtgttacactttatagggtgttatacttataacaaggt 31579076  T
Q  195 aggataaaaattagattaagtgta 218  Q
    ||||| ||||||||||||||||||    
T  31579077 aggat-aaaattagattaagtgta 31579099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 37110126 - 37109998
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| |||||||||||| || | |||||||||||||||||||| ||||||| |||| ||||    
T  37110126 gtactattttatcgttgaaatctttaacatgcaaacagagttgatgatattatgtggtagtcttaagtgttacactttgtggggtgttacgcttataaca 37110027  T
Q  191 ag--ataggataaaaattagattaagtgta 218  Q
    ||  ||||||| ||||||| ||||||||||    
T  37110026 aggtataggat-aaaattatattaagtgta 37109998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 26588037 - 26588121
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||| |||||||| | || ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  26588037 tgatatcatgtgatagtcttgagtgttacactttgtggggtgttacacttaaaacaaggtaggat-aaaattagattaagtgtatt 26588121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 43925349 - 43925225
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||  |||||||| ||| || |||||  ||||| ||||||||||||| |    
T  43925349 tattttatcgttggcatctttaacatgcaaacagagttgatgatattatgtgattgtattaagtattaaacgttgtgaggtgttgcacttaaaacaaggt 43925250  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    | ||| ||||||||||||||||||||    
T  43925249 atgat-aaaattagattaagtgtatt 43925225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 10359123 - 10359235
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||| ||||||||||  || ||||||||| ||||| | ||| || | |||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  10359123 gtactaatttatcgttgacatctttaacatgcaaacagagttgatgttgttatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaaca 10359222  T
Q  191 agataggataaaa 203  Q
    || || |||||||    
T  10359223 aggtatgataaaa 10359235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 12165994 - 12165876
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||  || ||||||||| ||||| | |||||||||||||||||         |||||||||||||||| ||||||||||||||||||    
T  12165994 tactattttatcgttgtcatctttaacatgcaaacagagttgctgatattatgtga---------gtgttacactttgtggggtgttacacttaaaacaa 12165904  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | ||| || ||||||||||||||||||||    
T  12165903 ggtagaat-aaaattagattaagtgtatt 12165876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 24211994 - 24211867
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | ||| |||||||||||||| |  ||||||||||| |||    
T  24211994 ggtactattttatcgttggaatctttaacatgcaaataaagttgatgatattatgtgatagtcttaggtgttacactttgtaggatgttacacttagaac 24211895  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||| ||||||||||    
T  24211894 aaggtatgat-aaaattatattaagtgta 24211867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 17842493 - 17842621
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| |||||||||||| || | ||||||||||||||||||||  |||||| |||| ||||    
T  17842493 gtactattttatcgttgaaatctttaacatgcaaacagagttgatgatattatgtggtagtcttaagtgttacactttgtgggatgttacgcttataaca 17842592  T
Q  191 ag--ataggataaaaattagattaagtgta 218  Q
    ||  ||||||| ||||||| ||||||||||    
T  17842593 aggtataggat-aaaattatattaagtgta 17842621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 22687447 - 22687363
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||| ||| |||| | || ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  22687447 tgatatcatgagatagtcttgagtgttacactttgtggggtgttacacttaaaacaaggtaggat-aaaattagattaagtgtatt 22687363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 27421313 - 27421417
Alignment:
Q  115 taacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaag 214  Q
    ||||||| ||||| | |||||||||| ||  |||| | ||||||||||||||||||||  |||||||||||||| ||| |||||| ||||||||||||||    
T  27421313 taacatgcaaacagagttgctgatatcatacgatagtcttaagtgttacactttgtgggatgttacacttaaaataaggtaggat-aaaattagattaag 27421411  T
Q  215 tgtatt 220  Q
    ||||||    
T  27421412 tgtatt 27421417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 33688171 - 33688299
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| |||  || |||||| || ||||| | |||||||||| || ||||| | || | ||||||||||| |||||||||||||||||||||    
T  33688171 gtactattttatcattgacatctttaacttgcaaacagagttgctgatatcatatgatagtcttgaatgttacactttatggagtgttacacttaaaaca 33688270  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    |  || ||| ||||||||||||||||||||    
T  33688271 aagtatgat-aaaattagattaagtgtatt 33688299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 35353360 - 35353259
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||| ||| ||| |||||||||| |||| | |||||||||||| ||| ||| |||||||||||||||||    
T  35353360 gtactattttatcgttgacatctttaacatgcaaatatagttgatgatattatgagatagtcttaagtgttacattttctggggtgttacacttaaaaca 35353261  T
Q  191 ag 192  Q
    ||    
T  35353260 ag 35353259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 44413346 - 44413414
Alignment:
Q  149 aatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||||    
T  44413346 aatagtaagtgttacactttgtggggtgttacacttaaaacaaggtatgat-aaaattagattaagtgta 44413414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 46481038 - 46481138
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||  ||||||||||||||| | |||||||||||||||| ||   ||||||||||||||||    
T  46481038 gtactattttatcgttgacatctttaacatgcaaacaaagttaatgatattatgtgatagtcttaagtgttacactttatgagatgttacacttaaaaca 46481137  T
Q  191 a 191  Q
    |    
T  46481138 a 46481138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 31520651 - 31520726
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    ||||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||    
T  31520651 tactattttatcgttggcatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactt 31520726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 32593115 - 32593191
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    ||||||||||| |||||  || ||||||||| ||||||| ||| |||||||||| |||| | |||||||||||||||    
T  32593115 gtactattttaacgttgacatctttaacatgcaaacatagttgatgatattatgcgatagtcttaagtgttacactt 32593191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 26980557 - 26980482
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    ||||||||||||||||  || ||||||||| ||| | | |||||||||| |||||||| | |||||||||||||||    
T  26980557 tactattttatcgttgacatctttaacatgcaaatagagttgctgatatcatgtgatagtcttaagtgttacactt 26980482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 29173773 - 29173699
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    ||||||||||||||||| ||||| |||||| ||||| | ||| ||||||||||||||| | |||||||| ||||||    
T  29173773 tactattttatcgttggcatttt-aacatgcaaacagagttgatgatattatgtgatagtcttaagtgtaacactt 29173699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 6546919 - 6546886
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||||||||||||    
T  6546919 gggagcttctacggtgcagtcatgaaactgactt 6546886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 15612520 - 15612553
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||||||||||||    
T  15612520 gggagcttctacggtgcagtcatgaaactgactt 15612553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 38053714 - 38053637
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    ||||||||||||| ||||| || ||||||||  ||| | | ||| ||||||||||||||| | |||||||||||||||    
T  38053714 ggtactattttattgttggaatctttaacatccaaatagagttgatgatattatgtgatagtcttaagtgttacactt 38053637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 26980493 - 26980447
Alignment:
Q  173 agtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  26980493 agtgttacacttaaaacaaggtagaat-aaaattagattaagtgtatt 26980447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 29173710 - 29173664
Alignment:
Q  173 agtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  29173710 agtgtaacacttaaaacaaggtaggat-aaaattagattaagtgtatt 29173664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 26980707 - 26980673
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||| ||||||||||||||||||||||    
T  26980707 agggagcttctaaggtgcagtcatgaaactgactt 26980673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 44411453 - 44411507
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgata 149  Q
    |||||||||||||| || ||||||||| ||||| | ||| |||||||||||||||    
T  44411453 tattttatcgttggcatctttaacatgcaaacaaagttgatgatattatgtgata 44411507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 31520715 - 31520759
Alignment:
Q  173 agtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||    
T  31520715 agtgttacacttaaaacaaggtatgat-aaaattagattaagtgta 31520759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 32432851 - 32432819
Alignment:
Q  55 ggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||| |||||||||||    
T  32432851 ggagcttctacggtgcagtcaggaaactgactt 32432819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 35934175 - 35934044
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    |||||||||||||| ||||  || ||||||||||||||| | |||||||||| |||||||| | |||||||||||||||||| | |||||||||||||||    
T  35934175 cggtactattttattgttgacatctttaacatggaaacaaagttgctgatatcatgtgatagtcttaagtgttacactttgtagggtgttacacttaaaa 35934076  T
Q  189 caagataggataaaaattagattaagtgtatt 220  Q
    |||| ||||||||||| |||||||||||||||    
T  35934075 caaggtaggataaaaactagattaagtgtatt 35934044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 699426 - 699301
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||| ||    
T  699426 tactattttatcgttggcatctttaacatgcaaacatagttgatgatattatgtgatagtcttaagtattacactttgtggagtgttacacttaaaataa 699327  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | || ||| ||||||||||||||||||    
T  699326 ggtatgat-aaaattagattaagtgta 699301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 31786543 - 31786668
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| || || | ||| ||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  31786543 ggtactattttatcgttggcatctttaacatgcaatcagagttgatgatattatgtgatagttttaagtgttacactttgtagggtgttacacttaaaac 31786642  T
Q  190 aagataggataaaaattagattaagtg 216  Q
    |||||||||| ||||||||||||||||    
T  31786643 aagataggat-aaaattagattaagtg 31786668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 23116119 - 23116246
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||    
T  23116119 ggtactattttatcgttgacatctttaacatgcaaacagatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttgaaac 23116218  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  23116219 aaggtaggat-aaaattagattaagtgta 23116246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 21088668 - 21088792
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||  ||||||| ||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| |    
T  21088668 tattttatcgttggcatctttaacatacaaacatagttgatgatattatgtgataatcttaagtgttacactttgtgggatgttacacttaaaacaaggt 21088767  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||| ||||||||| ||||||    
T  21088768 aggat-aaagttagattaaatgtatt 21088792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 36867035 - 36866911
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||  ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  36867035 tattttatcgttgacatctttaacatacaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacacttaaaacaaggt 36866936  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||| ||||||    
T  36866935 aggat-aaaattagattaaatgtatt 36866911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 40133658 - 40133534
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||  ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  40133658 tattttatcgttgacatctttaacatacaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacacttaaaacaaggt 40133559  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||| ||||||    
T  40133558 aggat-aaaattagattaaatgtatt 40133534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 27318385 - 27318511
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| ||||||| |    
T  27318385 gtactattttatcgttgaaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttaaaata 27318484  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  27318485 aggtaggat-aaaattagattaagtgta 27318511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 19120137 - 19120008
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||  | |||||||||| |||||||| | |||||||||||||||||||| |||||| |||||||||    
T  19120137 ggtactattttatcgttggcatctttaacatgcaaacggagttgctgatatcatgtgatagtcttaagtgttacactttgtggggtgttatacttaaaac 19120038  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||||| ||||| ||||    
T  19120037 aaggtaggat-aaaattagagtaagtttatt 19120008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 22981069 - 22980944
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||  ||||||||||||||| | |||||||||||| ||||||  ||||||||||||||||||    
T  22981069 tactattttatcgttggcatctttaacatgcaaacagagtttatgatattatgtgatagtcttaagtgttacattttgtgaggtgttacacttaaaacaa 22980970  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | |||||| ||||||||||||||||||    
T  22980969 ggtaggat-aaaattagattaagtgta 22980944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 25500823 - 25500952
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||  ||| | | |||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||    
T  25500823 ggtactattttatcgttggcatctttaacatctaaagaaagttgctgatatcatgtgatgatcttaagtgttacactttgtggggtgttacacttaaaac 25500922  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| |||||| ||||||| ||||||| ||||    
T  25500923 aaggtaggat-aaaattaaattaagtttatt 25500952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 38528135 - 38528259
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||||||| ||| ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||    
T  38528135 gtactattttatcgttgatatctttaacatgtaaatagatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttgaaaca 38528234  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || || ||| ||||||||||||||||    
T  38528235 aggtaagat-aaaattagattaagtg 38528259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 22255460 - 22255333
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||| ||| | |||||||||||||||||||  ||||||| |||| |||    
T  22255460 ggtactattttatcgttggaatatttaacatgcaaacatagttgatgatattatgtaatagttttaagtgttacactttgtgtggtgttacgcttataac 22255361  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    || ||||| | ||||||||||||||||||    
T  22255360 aaaataggct-aaaattagattaagtgta 22255333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 30969223 - 30969350
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||| ||||  || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||||||  ||||||||||||||||||    
T  30969223 tactattttattgttgacatctttaacatgcaaacaaagttgctgatatcatgtgatagtcttaagtgttacactttgtgaggtgttacacttaaaacaa 30969322  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
      |||||| ||||||||||||||||||||    
T  30969323 agtaggat-aaaattagattaagtgtatt 30969350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 5830169 - 5830043
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| ||||    
T  5830169 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacgcttataaca 5830070  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||| ||||||||||||    
T  5830069 aggtaagat-aaaatgagattaagtgta 5830043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 23954692 - 23954813
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| ||||| |||||| ||||| | ||| ||||||||||||||| | |||||||||||| ||||||  ||||||||||||||||||| |    
T  23954692 tattttatcgttggcatttt-aacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacattttgtgaggtgttacacttaaaacaaggt 23954790  T
Q  195 aggataaaaattagattaagtgta 218  Q
    ||||| ||||||||||||||||||    
T  23954791 aggat-aaaattagattaagtgta 23954813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 5837833 - 5837704
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||| ||||||  || ||||||||| ||| | | |||||||||| |||||||| | |||||||||||||||||||| || |||||||||||||    
T  5837833 ggtactattttgtcgttgtcatctttaacatgcaaagagagttgctgatatcatgtgatagtcttaagtgttacactttgtggggtattacacttaaaac 5837734  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||  ||||||  |||||||||||||||||||    
T  5837733 aatgtaggat-taaattagattaagtgtatt 5837704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 13956259 - 13956384
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| | ||| ||||||||| ||||| | ||||||||||| |||||| | ||||||||||| ||||    
T  13956259 ggtactattttatcgttggcatctttaacatgcaaacaaatttgatgatattatatgatagtcttaagtgttacgctttgtagggtgttacacttgaaac 13956358  T
Q  190 aagataggataaaaattagattaagtg 216  Q
    ||||||  || ||||||||||||||||    
T  13956359 aagataaaat-aaaattagattaagtg 13956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 33908510 - 33908386
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||  ||||||| |||  ||||||||| |||| | |||||||||||||||| ||| |||||||| ||||||||    
T  33908510 gtactattttatcgttggcatctttaacatacaaacatagttgacgatattatgcgatagtcttaagtgttacactttctggggtgttacatttaaaaca 33908411  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || || ||| ||||||||||||||||    
T  33908410 aggtatgat-aaaattagattaagtg 33908386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 2888342 - 2888469
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||||||| ||| ||||||||| ||||| | |||||||||||||||| |||| ||||| |||| ||||    
T  2888342 ggtactattttatcgttgacatctttaacatgcaaacatatttgatgatattatctgatagtcttaagtgttacactttatggaatgttaaacttgaaac 2888441  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| ||  || ||||||||||||||||||    
T  2888442 aaggtaaaat-aaaattagattaagtgta 2888469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 36860697 - 36860574
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacactt-aaaacaaga 193  Q
    |||||||||||||  || ||||||||  ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||| |||| |||     
T  36860697 tattttatcgttgacatctttaacatacaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacacttaaaaaaaagg 36860598  T
Q  194 taggataaaaattagattaagtgta 218  Q
    |||||| ||||||||||||| ||||    
T  36860597 taggat-aaaattagattaaatgta 36860574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 7208762 - 7208888
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | |||   ||||||||||||| | |||||||||||||||||||  |||||||  ||| ||||    
T  7208762 gtactattttatcgttggaatctttaacatgcaaacagagttgaaaatattatgtgatagtcttaagtgttacactttgtgaggtgttacgtttataaca 7208861  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  7208862 aggtaggat-aaaattagattaagtgta 7208888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 12910588 - 12910506
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    ||||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  12910588 tgatattatgtgatagtcttaggtgttacactttgtggggtgttacacttaaaacaaggtaggat-aaaattagattaagtgta 12910506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 26268329 - 26268223
Alignment:
Q  113 tttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagatta 212  Q
    ||||||||| ||||||| |||||||||| |||||||| | |||||||||||||||||||  ||||||||||||||||||| || ||| |||||| |||||    
T  26268329 tttaacatgcaaacatagttgctgatatcatgtgatagtcttaagtgttacactttgtgcggtgttacacttaaaacaaggtatgat-aaaatttgatta 26268231  T
Q  213 agtgtatt 220  Q
    | ||||||    
T  26268230 attgtatt 26268223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 8437243 - 8437120
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||  ||||| | ||| | ||||||||||||||| ||||||||||||| |||||| ||||   |||||||||    
T  8437243 ggtactattttatcgttggcatctttaacattcaaacagagttgatcatattatgtgataatcttaagtgttacacattgtggggtgtataacttaaaac 8437144  T
Q  190 aagataggataaaaattagattaag 214  Q
    |||  ||||| ||||||||||||||    
T  8437143 aaggcaggat-aaaattagattaag 8437120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 9200500 - 9200382
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | |||||||||| ||||||         ||||||||||||||||| |||||||||||||||||    
T  9200500 tactattttatcgttggcatctttaacatgcaaacagagttgctgatatcatgtga---------gtgttacactttgtggaatgttacacttaaaacaa 9200410  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | |||||| ||||||||||||| ||||||    
T  9200409 ggtaggat-aaaattagattaaatgtatt 9200382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 14919431 - 14919557
Alignment:
Q  96 attttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagata 195  Q
    ||||||| ||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||| ||||| ||||||  |||||||||||| || ||| ||    
T  14919431 attttattgttggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtattacaatttgtgaggtgttacacttataataaggta 14919530  T
Q  196 ggataaaaattagattaagtgtattttt 223  Q
    |||| |||||||||||||||||| ||||    
T  14919531 ggat-aaaattagattaagtgtagtttt 14919557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 15992436 - 15992566
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    |||||||||||||||||||| || ||||||||| ||||| | || ||||||| ||| |||| | |||||||| ||||||||||| ||||| |||| |||     
T  15992436 cggtactattttatcgttggcatctttaacatgcaaacagagttcctgatatcatgcgatagtcttaagtgtgacactttgtggggtgttgcactcaaat 15992535  T
Q  189 caagataggataaaaattagattaagtgtatt 220  Q
    |||| ||| || |||||||||| |||||||||    
T  15992536 caaggtagaat-aaaattagatcaagtgtatt 15992566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 35504642 - 35504516
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| | ||||||||||||| | |||||||||||||||||||| ||||||| |||| || |    
T  35504642 gtactattttatcgttgaaatctttaacatgcaaacagatttgataatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttataata 35504543  T
Q  191 agataggataaaaattagattaagtgta 218  Q
     | |||||| ||||||| ||||||||||    
T  35504542 tggtaggat-aaaattatattaagtgta 35504516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 35511380 - 35511501
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| |     |||||||| ||||||| ||||||||||| |||||    
T  35511380 gtactattttatcgttggcatctttaacatgcaaacagatttgatgatattatgtgatagt-----gtgttacattttgtggggtgttacacttgaaaca 35511474  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || | |||| ||||||||||||||||||    
T  35511475 aggttggat-aaaattagattaagtgta 35511501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 35826384 - 35826503
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||  ||||| ||||| |||||||||||||||||||||| |||||||||    
T  35826384 gtactattttatcgttgaaatctttaacatgcaaacagagttgatgatattatg--ataatcttaagggttacactttgtggagtgttacgcttaaaaca 35826481  T
Q  191 agataggataaaaattagattaa 213  Q
    |  ||| || |||||||||||||    
T  35826482 atgtagaat-aaaattagattaa 35826503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 8741783 - 8741912
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatatt-atgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||||||||||||||||  || ||||||||| ||||| | ||||| ||| | |||||||| | |||||||||||||||||| | ||||||||||||||||    
T  8741783 gtactattttatcgttgacatctttaacatgcaaacagagttgctcataatcatgtgatagtcttaagtgttacactttgtagggtgttacacttaaaac 8741882  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| || ||  ||||||||||||| ||||||    
T  8741883 aaggtatga-caaaattagattaattgtatt 8741912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 32563417 - 32563298
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || | ||||||| ||||| | |||||||||| ||||||         ||||||||||||||||  ||||||||||||||||    
T  32563417 gtactattttatcgttggcatctataacatgcaaacagagttgctgatatcatgtga---------gtgttacactttgtgggctgttacacttaaaaca 32563327  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||||||||    
T  32563326 aggtaggat-aaaattagattaagtgtatt 32563298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 6824400 - 6824505
Alignment:
Q  113 tttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagatta 212  Q
    ||||||||| ||||| | ||||| ||||  ||||||| | |||||||||||||||||||| |||||||| |||||||||| || ||| ||||||||||||    
T  6824400 tttaacatgcaaacagagttgct-atatcttgtgatagtcttaagtgttacactttgtggggtgttacatttaaaacaaggtatgat-aaaattagatta 6824497  T
Q  213 agtgtatt 220  Q
    ||||||||    
T  6824498 agtgtatt 6824505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 22973980 - 22974106
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| || |  || ||||||||| ||||| | ||| | ||||||||| ||| | |||||||||||| ||||||  ||||||| |||| ||||    
T  22973980 gtactattttattgtcgaaatctttaacatgcaaacagagttgataatattatgtaatagtcttaagtgttacattttgtgaggtgttacgcttataaca 22974079  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    ||||||||| ||||||||||||||||||    
T  22974080 agataggat-aaaattagattaagtgta 22974106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 31705510 - 31705636
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| |||| || ||||||||| ||||| | ||| ||||||||||||||  | |||||||||||| ||||||   |||||| |||| ||||    
T  31705510 gtactattttatctttggaatctttaacatgcaaacagagttgatgatattatgtgatggtcttaagtgttacattttgtgagatgttacgcttataaca 31705609  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||||||||||||||    
T  31705610 aggtatgat-aaaattagattaagtgta 31705636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 27330581 - 27330453
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||| ||||||| ||||  || ||||||||| ||| | | |||||||||| ||| |||| | |||||||| ||||||  ||| |||||||||||||||||    
T  27330581 gtaccattttattgttgaaatctttaacatgcaaatagagttgctgatatcatgcgatagtcttaagtgtgacacttcatggggtgttacacttaaaaca 27330482  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||| || ||||||||||||||||||||    
T  27330481 aggtagaat-aaaattagattaagtgtatt 27330453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 39573052 - 39572968
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||| |||||||| | |  |||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||    
T  39573052 tgatatcatgtgatagtctcgagtgttacactttgtgggatgttacacttaaaacaaggtaggat-aaaattagattaagtgtatt 39572968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 17157929 - 17158023
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacactta 185  Q
    |||||||||||||||||  || |||| |||| ||||| | ||| | ||||||||||||  | |||||||||||||||||||| ||||||||||||    
T  17157929 gtactattttatcgttgaaatctttatcatgcaaacagagttgataatattatgtgatggtcttaagtgttacactttgtggggtgttacactta 17158023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 22019896 - 22019781
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||| | | |||||||||| ||||||         |||||| ||||||||| ||||||||||||||| ||| |    
T  22019896 tattttatcgttggcatctttaacatgcaaatagagttgctgatatcatgtga---------gtgttatactttgtggggtgttacacttaaaataaggt 22019806  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||||||||||||||||    
T  22019805 aggat-aaaattagattaagtgtatt 22019781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 25669853 - 25669735
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| |||||| ||||||         ||||||||||| ||||||||||||||||||||||    
T  25669853 gtactattttatcgttgacatctttaacatgcaaacagagttgatgatatcatgtga---------gtgttacactt-gtggagtgttacacttaaaaca 25669764  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    |  |||||| ||||||||||||||||||||    
T  25669763 aagtaggat-aaaattagattaagtgtatt 25669735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 7693442 - 7693379
Alignment:
Q  156 agtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||||||||| ||||||||||||||||||| || ||| |||||||||||||| |||||    
T  7693442 agtgttacactttgtggggtgttacacttaaaacaaggtaagat-aaaattagattaagcgtatt 7693379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 24886364 - 24886288
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    |||||||||||| ||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||    
T  24886364 gtactattttattgttggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactt 24886288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 1429059 - 1429136
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    ||||||||||||||||||| || ||||||||| ||| | | ||  ||||||||||||||| | |||||||||||||||    
T  1429059 ggtactattttatcgttggcatctttaacatgcaaataaagtttatgatattatgtgatagtcttaagtgttacactt 1429136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 15724765 - 15724637
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||  || ||||||||| ||||| | ||| |||||| || ||||| | |||| || ||||||||| || |||||| |||||||| |    
T  15724765 gtactattttatagttgacatctttaacatgtaaacaaagttgttgatatcatatgatagtcttaattgatacactttggggcgtgttatacttaaaata 15724666  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||| || ||||||| ||||||||||||    
T  15724665 aggtagaat-aaaattaaattaagtgtatt 15724637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 28416490 - 28416553
Alignment:
Q  156 agtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||||||||| ||||||||||||||| |||  || || ||||||||||||||||||||    
T  28416490 agtgttacactttgtggggtgttacacttaaaataaggcagaat-aaaattagattaagtgtatt 28416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 42342942 - 42342880
Alignment:
Q  156 agtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||||||||| || |||||||||||||||| || ||| ||||||||||||||||||||    
T  42342942 agtgttacactttgtggtgtattacacttaaaacaag-taagat-aaaattagattaagtgtatt 42342880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 25889648 - 25889587
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataat 151  Q
    ||||||||||||| |||||||| ||||||||| ||||| | ||| ||||||||||| |||||    
T  25889648 ggtactattttattgttggtatctttaacatgcaaacagagttgatgatattatgtcataat 25889587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 42343146 - 42343113
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||||||||||||    
T  42343146 gggagcttctacggtgcagtcatgaaactgactt 42343113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 9200659 - 9200619
Alignment:
Q  44 atattagttagggagcttctacggtgcagtcatgaaactga 84  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  9200659 atattaattaaggagcttctacggtgcagtcatgaaactga 9200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 26269237 - 26269201
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||| ||||||||||||||||||||||||||||    
T  26269237 ttagggagtttctacggtgcagtcatgaaactgactt 26269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 14409239 - 14409297
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgata 149  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| |||||||||| ||||    
T  14409239 gtactattttatcgttgacatctttaacatgcaaacatagttgatgatattatgcgata 14409297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 19120285 - 19120251
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||| ||||||||||||||||||||||    
T  19120285 agggagcttctaaggtgcagtcatgaaactgactt 19120251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 22020049 - 22020015
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||| |||||||||||||||||||||||||||||    
T  22020049 agggaacttctacggtgcagtcatgaaactgactt 22020015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 25500676 - 25500706
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactga 84  Q
    |||||||||||||||||||||||||||||||    
T  25500676 gggagcttctacggtgcagtcatgaaactga 25500706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 27330730 - 27330696
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||| ||||||    
T  27330730 agggagcttctacggtgcagtcatgaaattgactt 27330696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 28416300 - 28416334
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||||| |||||||    
T  28416300 agggagcttctacggtgcagtcatgaagctgactt 28416334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 35511231 - 35511265
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||| |||||||||||    
T  35511231 agggagcttctacggtgcagtcaggaaactgactt 35511265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 1429125 - 1429169
Alignment:
Q  173 agtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  1429125 agtgttacacttaaaacaaggtaggat-aaaattagattaaatgta 1429169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 11898240 - 11898207
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||| |||||||||||    
T  11898240 gggagcttctacggtgcagtcaggaaactgactt 11898207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 38527984 - 38528017
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactga 84  Q
    ||||||||||||||||||||||||| ||||||||    
T  38527984 ttagggagcttctacggtgcagtcaggaaactga 38528017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 5112256 - 5112334
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagt 215  Q
    ||||||||||||| | | |||||||||  ||||||||| || |||||||||||||| | || ||| |||||||||||||||    
T  5112256 tgatattatgtgaaagtcttaagtgttgtactttgtggggt-ttacacttaaaacatggtatgat-aaaattagattaagt 5112334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 39573235 - 39573203
Alignment:
Q  55 ggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||| |||||||||||||    
T  39573235 ggagcttctacggtgcagttatgaaactgactt 39573203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 12186 - 12058
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | |||||||||| ||| |||| | |||||||| ||||||||||| |||||||||||||||||    
T  12186 gtactattttatcgttggcatctttaacatgcaaacagagttgctgatatcatgcgatagtcttaagtgtgacactttgtggggtgttacacttaaaaca 12087  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    ||||||||| ||||||||||||||||||||    
T  12086 agataggat-aaaattagattaagtgtatt 12058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 12332 - 12300
Alignment:
Q  55 ggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||| ||||    
T  12332 ggagcttctacggtgcagtcatgaaacttactt 12300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 17173567 - 17173439
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  17173567 gtactattttatcgttggcatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaaca 17173468  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    |  |||||| ||||||||||||||||||||    
T  17173467 atgtaggat-aaaattagattaagtgtatt 17173439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 35020970 - 35021100
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||    
T  35020970 tactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttaaaacaa 35021069  T
Q  192 gataggataaaaattagattaagtgtattttt 223  Q
    | |||||| |||||||||||||||||| ||||    
T  35021070 ggtaggat-aaaattagattaagtgtagtttt 35021100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 7703787 - 7703658
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || |||||| || ||||| | |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  7703787 ggtactattttatcgttggcatctttaacgtgcaaacagagttgctgatatcatgtgatagtcttaagtgtgacactttgtggagtgttacacttaaaac 7703688  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| ||| || ||||||||||||||||||||    
T  7703687 aaggtagaat-aaaattagattaagtgtatt 7703658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 17167990 - 17167862
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  17167990 gtactattttatcgttggcatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaaca 17167891  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    |  |||||| ||||||||||||||||||||    
T  17167890 atgtaggat-aaaattagattaagtgtatt 17167862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 28002920 - 28003044
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| ||||||||||||||| | |||||||||||||||| ||| |||||||||||||||||    
T  28002920 gtactattttatcgttgacatctttaacatgcaaacatagttgatgatattatgtgatagttttaagtgttacactttctggggtgttacacttaaaaca 28003019  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || |||||| ||||||||||||||||    
T  28003020 aggtaggat-aaaattagattaagtg 28003044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 47254017 - 47253889
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||| || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||||||| |||||||||||||||||    
T  47254017 gtactattttattgttggcatctttaacatgcaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaaca 47253918  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||| ||||||||||||    
T  47253917 aggtaggat-aaaattaaattaagtgtatt 47253889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 55241039 - 55241167
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||||||| || |||||||| | |||||||||||||||||||  |||||||||||||||||    
T  55241039 gtactattttatcgttggcatctttaacatgcaaacagagttgctgacatcatgtgatagtcttaagtgttacactttgtgaggtgttacacttaaaaca 55241138  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || || ||| ||||||||||||||||||||    
T  55241139 aggtatgat-aaaattagattaagtgtatt 55241167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 35025530 - 35025642
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||||| ||| |||||||||| |||| | |||||||||||||||| ||| |||| ||||||||||||    
T  35025530 gtactattttatcgttggcatctttaacatgcaaacatagttgatgatattatgcgatagtcttaagtgttacactttctggggtgtgacacttaaaaca 35025629  T
Q  191 agataggataaaa 203  Q
    |||||||||||||    
T  35025630 agataggataaaa 35025642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 55477825 - 55477951
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | || |||||||||| |||||| |||||||||||| ||||    
T  55477825 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttcagtgttacacgttgtggggtgttacacttataaca 55477924  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  55477925 agttaggat-aaaattagattaagtgta 55477951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 1815579 - 1815466
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||    
T  1815579 ggtactattttatcgttggaatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacccttaaaac 1815480  T
Q  190 aagataggataaaa 203  Q
    ||| ||||||||||    
T  1815479 aaggtaggataaaa 1815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 33341675 - 33341547
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||||||  |||||||||||||||||    
T  33341675 gtactattttatcgttgacatctttaacatgcaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgtgaggtgttacacttaaaaca 33341576  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||| ||||||| ||||    
T  33341575 aggtaggat-aaaattatattaagtatatt 33341547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 36493624 - 36493748
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||| |||||||||||| || | ||||||||||||||||||||||| |||||||||||||||    
T  36493624 tactattttatcgttggcatctttaacatgcaaacagagttgatgatattatgtggtagtcttaagtgttacactttgtggagt-ttacacttaaaacaa 36493722  T
Q  192 gataggataaaaattagattaagtgta 218  Q
      || ||| ||||||||||||||||||    
T  36493723 tgtatgat-aaaattagattaagtgta 36493748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 4934135 - 4934262
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||||||| ||| ||||||||| ||||| | |||||||||||||||||||  |||||  |||||||||    
T  4934135 ggtactattttatcgttgtcatctttaacatgcaaacatagttgatgatattatatgatagtcttaagtgttacactttgtgaggtgttggacttaaaac 4934234  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| ||| || ||||||||||||||||||    
T  4934235 aaggtagaat-aaaattagattaagtgta 4934262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 34948033 - 34948159
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagt--gttacactttgtggagtgttacacttaaaacaag 192  Q
    |||||||||||||| || ||||||||| ||||| | ||| |||||| |||||||| | ||||||  |||||||||||||| ||||| ||||| |||||||    
T  34948033 tattttatcgttggcatctttaacatgcaaacagagttgttgatatcatgtgatagtcttaagtacgttacactttgtggggtgttgcactttaaacaag 34948132  T
Q  193 ataggataaaaattagattaagtgtatt 220  Q
    ||||||| ||||||||||||||||||||    
T  34948133 ataggat-aaaattagattaagtgtatt 34948159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 37663674 - 37663801
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || |||||||||  ||||   ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| | |    
T  37663674 ggtactattttatcgttggaatctttaacatgcgaacaacgttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttatagc 37663773  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  37663774 aaggtaggat-aaaattagattaagtgta 37663801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 25700991 - 25701117
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggag-tgttacacttaaaaca 190  Q
    ||||||||||||||||   | ||||||||| ||||| | ||| |||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  25700991 tactattttatcgttgacttctttaacatgcaaacaaagttgatgatgttatgtgataatcttaagtgttacactttgtggggatgttacacttaaaaca 25701090  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||| ||||||    
T  25701091 aggtaggat-aaaattagatttagtgta 25701117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 54499170 - 54499300
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    |||||| ||||||||||||| ||||| |||||||||||| | || || |||| |||||||| | ||||  |||||||||||| | |||||||||||||||    
T  54499170 cggtaccattttatcgttggcatttt-aacatggaaacagagttactaatatcatgtgatagtcttaaaagttacactttgtagggtgttacacttaaaa 54499268  T
Q  189 caagataggataaaaattagattaagtgtatt 220  Q
    |||| || ||||||||||||||||||| ||||    
T  54499269 caaggtatgataaaaattagattaagtatatt 54499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 37288005 - 37287875
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgt-ggagtgttacacttaaaac 189  Q
    |||||||||||||||||| || || |||||| ||||| | |||||||||| ||||| || | |||||||||||| ||||| || | ||||||||||||||    
T  37288005 gtactattttatcgttggcatcttcaacatgcaaacaaagttgctgatatcatgtgctagtcttaagtgttacattttgtgggggcgttacacttaaaac 37287906  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||  |||| ||||||||||||||||||||||    
T  37287905 aaagtaggttaaaaattagattaagtgtatt 37287875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 37775935 - 37775816
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||||||||||| ||||||||| ||||| | |||||||||| ||||||         |||||||||||||||| |||||||||||||||||    
T  37775935 gtactattttatcgttggtatctttaacatgcaaacaaagttgctgatatcatgtga---------gtgttacactttgtggggtgttacacttaaaaca 37775845  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||| || ||||||||||||||||||||    
T  37775844 aggtagaat-aaaattagattaagtgtatt 37775816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 46888091 - 46888222
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||  | ||| ||||||||||||||| |  ||||||||||  ||||||| ||||||||||| ||||    
T  46888091 ggtactattttatcgttggcatctttaacatgcaaaccgatttgatgatattatgtgatagt-ctaagtgttacgttttgtggggtgttacacttgaaac 46888189  T
Q  190 aagataggataaaaattagattaagtgtattttt 223  Q
    ||| |||||| |||||||||||||||||| ||||    
T  46888190 aaggtaggat-aaaattagattaagtgtagtttt 46888222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 32579723 - 32579600
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  |||||||||||| ||||||| ||| |||||||||  |||| | ||||| |||||||||| ||  || ||||||||||||||    
T  32579723 gtactattttatcgttgacatttttaacatgcaaacatagttgatgatattataagatagtcttaagagttacactttctgaggtcttacacttaaaaca 32579624  T
Q  191 agataggataaaaattagattaagt 215  Q
    || |||||| |||||||||||||||    
T  32579623 aggtaggat-aaaattagattaagt 32579600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 25184390 - 25184264
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| || || |||||||||||| ||||| | ||| | ||||||||||||| | |||||||||||||||||||  ||||||| |||| ||||    
T  25184390 gtactattttattgtcggaatttttaacatgcaaacagagttgataatattatgtgatagtcttaagtgttacactttgtgaggtgttacgcttataaca 25184291  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| |||||||||| |||||||    
T  25184290 aggtaggat-aaaattagatcaagtgta 25184264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 38012131 - 38012005
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||| ||||||||| || ||||||| ||| ||||||||||||||| | ||||| |||||||||| |||  ||||||||||||||||    
T  38012131 gtactattttattgttggcatttttaacgtgcaaacatagttgatgatattatgtgatagtcttaagcgttacactttctgggatgttacacttaaaaca 38012032  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || ||  || ||||||| ||||||||||    
T  38012031 aggtataat-aaaattaaattaagtgta 38012005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 34361425 - 34361557
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||| | | ||| |||||||||||||||   |||||||||||||||||| | ||||||| |||| |||    
T  34361425 ggtactattttatcgttggaatctttaacatgcaaatagagttgatgatattatgtgatagctttaagtgttacactttgtagggtgttacgcttagaac 34361524  T
Q  190 aagataggataaaaattagattaagtgtattttt 223  Q
    ||| || ||| ||||||| |||||||||| ||||    
T  34361525 aaggtatgat-aaaattatattaagtgtaatttt 34361557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 50697520 - 50697392
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatgg-aaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    ||||||||||||||||||| || |||||||| | ||||| | ||| ||||||||||||||| | ||||||||| |||||||||  ||||||| |||| ||    
T  50697520 ggtactattttatcgttggaatctttaacattgcaaacagagttgatgatattatgtgatagtcttaagtgttgcactttgtgtggtgttacgcttataa 50697421  T
Q  189 caagataggataaaaattagattaagtgta 218  Q
    |||| |||||| ||||||| ||||||||||    
T  50697420 caaggtaggat-aaaattatattaagtgta 50697392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 3042896 - 3042770
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||| | ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| || |    
T  3042896 gtactattttatcgttgaaatctttaacaagcaaacaaagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttataata 3042797  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||| ||||||||||    
T  3042796 aggtatgat-aaaattatattaagtgta 3042770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 19440582 - 19440708
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| |||| || ||||||||| ||||| | ||| ||||||||||| ||||  ||||| ||||||| |||||| ||||||| |||| ||||    
T  19440582 gtactattttatcattggaatctttaacatgcaaacagagttgatgatattatgttataaacttaagggttacacgttgtggggtgttacgcttataaca 19440681  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||||||||||||||    
T  19440682 agctaagat-aaaattagattaagtgta 19440708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 50764997 - 50764906
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacac 182  Q
    |||||||||||||||||  || |||||| || ||||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||||||    
T  50764997 gtactattttatcgttgacatctttaacttgcaaacatagttgctgatatcatgtgataatattgagtgtttcactttgtggggtgttacac 50764906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 5047900 - 5048020
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||| || ||||||||| ||||||| ||  |||||| |||||||| | |||||||||||| |||| || || ||||||||||||||    
T  5047900 gtactattttattgttggcatctttaacatgcaaacatagtttatgatatcatgtgatagtcttaagtgttacattttgcgg-gtattacacttaaaaca 5047998  T
Q  191 agataggataaaaattagattaa 213  Q
    || |||||| |||||||||||||    
T  5047999 aggtaggat-aaaattagattaa 5048020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 23761349 - 23761221
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||| |||||||||||||||| |||||| || ||||| | |||||||||| ||| |||| | |||| ||| ||||||| ||  ||||||||||||||||    
T  23761349 ggtacaattttatcgttggtatctttaacgtgcaaacagagttgctgatatcatgcgatagtcttaaatgtgacactttatgaggtgttacacttaaaac 23761250  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||| || ||| ||||||||||||||||||||    
T  23761249 aaggta-gat-aaaattagattaagtgtatt 23761221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 30002575 - 30002694
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | |||||||||| ||||||         |||||||||||||||| ||||||||||||||| |    
T  30002575 gtactattttatcgttgacatctttaacatgcaaacagagttgctgatatcatgtga---------gtgttacactttgtggggtgttacacttaaaata 30002665  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||||||||    
T  30002666 aggtaggat-aaaattagattaagtgtatt 30002694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 879481 - 879608
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| ||  | || ||||||||| ||||| | ||| ||||||||||||||| | |||| ||||||||||||||  ||||||| |||| |||    
T  879481 ggtactattttattgtcagaatctttaacatgcaaacaaagttgatgatattatgtgatagtcttaaatgttacactttgtgaggtgttacgcttataac 879580  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| |||||||||||| |||||    
T  879581 aaggtaggat-aaaattagattatgtgta 879608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 6864308 - 6864200
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||| ||||||||||||| ||||||| |||| |||||| |    
T  6864308 tattttatcgttgtaatctttaacatgcaaacaaagttgatgatattatgtgatagtcttaagtattacactttgtggggtgttacgcttataacaaggt 6864209  T
Q  195 aggataaaa 203  Q
    | |||||||    
T  6864208 atgataaaa 6864200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 19089386 - 19089513
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || |||||||||  ||||   ||| ||||||||||||||| | |||||||||||||||||| | ||||||| | || | |    
T  19089386 ggtactattttatcgttgaaatctttaacatgcgaacaacgttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttacgcatatagc 19089485  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  19089486 aaggtaggat-aaaattagattaagtgta 19089513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 32912513 - 32912640
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||  ||| | | ||| ||||||||||||||| | |||||||||||||||||| | ||||||| |||| |||    
T  32912513 ggtactattttatcgttgaaatctttaacatacaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttacgcttagaac 32912612  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||| ||||||||||    
T  32912613 aaggtatgat-aaaattatattaagtgta 32912640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 33816452 - 33816543
Alignment:
Q  93 actattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacactt 184  Q
    |||||||||||||||  || ||||||||| ||||||| ||| |||||||||| |||| | |||||||||||||||||||| || ||||||||    
T  33816452 actattttatcgttgacatctttaacatgcaaacatagttgatgatattatgcgatagtcttaagtgttacactttgtggggtattacactt 33816543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 46884045 - 46884168
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    |||||||||||| |||| |||||||||||| ||||| ||||  ||||||||||||||| | |||||||||||| ||||||   |||||  |||| |||||    
T  46884045 tactattttatctttggaatttttaacatgcaaacaaaatttatgatattatgtgatagt-ttaagtgttacattttgtgagatgtta-gcttataacaa 46884142  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    |||| ||| ||||||||||||||||||    
T  46884143 gatatgat-aaaattagattaagtgta 46884168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 17272241 - 17272113
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||  || ||||| ||| ||| | | |||||||||| ||| |||| | |||||||| ||||||  ||| |||||||||||||||||    
T  17272241 gtactattttattgttgaaatctttaatatgcaaatagagttgctgatatcatgcgatagtcttaagtgtgacacttcatggggtgttacacttaaaaca 17272142  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||| || ||||||||||||||||||||    
T  17272141 aggtagaat-aaaattagattaagtgtatt 17272113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 42200007 - 42199880
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||| |||||||||||||| || ||||||||| ||| | | ||  ||||||||||||||| | |||||||||||||||||| | ||||||  |||| |||    
T  42200007 ggtattattttatcgttggaatctttaacatgcaaatagagtttatgatattatgtgatagtcttaagtgttacactttgtagggtgttatgcttagaac 42199908  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||| ||||||||||    
T  42199907 aaggtatgat-aaaattatattaagtgta 42199880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 49376244 - 49376158
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgt 177  Q
    |||||||||||||||||  || ||||||||  ||||| | ||| ||||||||||||||||| ||||||||||||| |||||| ||||    
T  49376244 gtactattttatcgttgacatctttaacatccaaacaaagttgatgatattatgtgataatcttaagtgttacacattgtggggtgt 49376158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 4598255 - 4598141
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||||| | |||||||||| ||||||         |||||||||||||||| |||||||||||||||||||      
T  4598255 tattttatcgttggcatctttaacatgaaaacagagttgctgatatcatgtga---------gtgttacactttgtggggtgttacacttaaaacaag-c 4598166  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    ||||| ||||||| ||||||||||||    
T  4598165 aggat-aaaattaaattaagtgtatt 4598141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 7152137 - 7152218
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtg 171  Q
    ||||||||||||||||||  || ||||||||| ||||| | ||| |||| |||||||||| |||||||||||| ||||||||    
T  7152137 ggtactattttatcgttgacatatttaacatgcaaacagagttgatgatgttatgtgatagtattaagtgttatactttgtg 7152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 9139460 - 9139396
Alignment:
Q  153 ttaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    |||||||||||||||||| | |||||||| |||||||||| |||||| ||||||||||||||||||    
T  9139460 ttaagtgttacactttgtagggtgttacagttaaaacaaggtaggat-aaaattagattaagtgta 9139396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 29584134 - 29584262
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||| ||||||| ||||  || ||||||||| ||| | | |||||||||| ||| |||| | |||||||| ||||||  ||| |||| ||||||||||||    
T  29584134 gtaccattttattgttgaaatctttaacatgcaaatagagttgctgatatcatgcgatagtcttaagtgtgacacttcatggggtgtaacacttaaaaca 29584233  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||| || ||||||||||||||||||||    
T  29584234 aggtagaat-aaaattagattaagtgtatt 29584262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 32592305 - 32592242
Alignment:
Q  156 agtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  32592305 agtgttacactttgtggggtgttacacttaaaacaaggtaggat-aaaattaaattaaatgtatt 32592242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 27396886 - 27396765
Alignment:
Q  98 tttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagatagg 197  Q
    ||||||||||  || ||||||||| |||||   |||||||||| ||| |||  | |||||||| ||||||| |||  |||||||||||||||||| |||     
T  27396886 tttatcgttgacatctttaacatgcaaacagcgttgctgatatcatgcgatggtcttaagtgtgacactttatgggatgttacacttaaaacaaggtaga 27396787  T
Q  198 ataaaaattagattaagtgtatt 220  Q
    || ||||||| ||||||||||||    
T  27396786 at-aaaattaaattaagtgtatt 27396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 33816536 - 33816591
Alignment:
Q  160 ttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtg 216  Q
    ||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  33816536 ttacactttctggggtgttacacttaaaacaaggtaggat-aaaattagattaagtg 33816591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 39398115 - 39398058
Alignment:
Q  162 acactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    ||||||||||| ||||||||||||||| |||  ||||| ||||||||||||||||||||    
T  39398115 acactttgtggggtgttacacttaaaataaggcaggat-aaaattagattaagtgtatt 39398058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 4598407 - 4598374
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||||||||||||    
T  4598407 gggagcttctacggtgcagtcatgaaactgactt 4598374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 4205412 - 4205376
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4205412 ttagggagcttctacggtgcagtcaagaaactgactt 4205376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 29583983 - 29584019
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29583983 ttagggagcttctacggtgcagtcatgaaattgactt 29584019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 17272390 - 17272355
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactta 88  Q
    |||||||||||||||||||||||||||| |||||||    
T  17272390 agggagcttctacggtgcagtcatgaaattgactta 17272355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 87
Target Start/End: Complemental strand, 7703931 - 7703901
Alignment:
Q  57 agcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||||||    
T  7703931 agcttctacggtgcagtcatgaaactgactt 7703901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 23431981 - 23431947
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||| |||||||||||||||||||||    
T  23431981 agggagcttctacagtgcagtcatgaaactgactt 23431947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 34361276 - 34361310
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||| |||||||||||    
T  34361276 agggagcttctacggtgcagtcaggaaactgactt 34361310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 19440434 - 19440467
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||| |||||||||||    
T  19440434 gggagcttctacggtgcagtcaggaaactgactt 19440467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 49376392 - 49376359
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||| |||||||||||    
T  49376392 gggagcttctacggtgcagtcaggaaactgactt 49376359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 32912362 - 32912398
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  32912362 ttagggagcttttacggtgcagtcaggaaactgactt 32912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 37776082 - 37776050
Alignment:
Q  55 ggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||| ||||||    
T  37776082 ggagcttctacggtgcagtcatgaaattgactt 37776050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 411 - 283
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||| ||| ||||||||||||||| |    
T  411 gtactattttatcgttggcatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttatggggtgttacacttaaaata 312  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    ||||||||| ||||||||||||| ||||||    
T  311 agataggat-aaaattagattaaatgtatt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 408337 - 408463
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||| ||||||| | ||||||||| |||||||||  ||||||| |||| ||||    
T  408337 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattgtgtgatagtcttaagtgttccactttgtgaggtgttacgcttataaca 408436  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  408437 aggtaggat-aaaattagattaagtgta 408463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 94330 - 94417
Alignment:
Q  130 attgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    |||| ||||||||||| ||| | |||||||||||||||||||| ||||||||||| ||||||| ||| || ||||||| ||||||||||    
T  94330 attgatgatattatgtaatagtcttaagtgttacactttgtggggtgttacacttgaaacaagctagaat-aaaattaaattaagtgta 94417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 4e-34; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 4318729 - 4318858
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||| |||||||  || ||||||||| ||||| | |||||||||| |||||||| | |||||||||||||||| | | |||||||||||||||||    
T  4318729 gtactatttcatcgttgacatctttaacatgaaaacagagttgctgatatcatgtgatagtcttaagtgttacactttatagggtgttacacttaaaaca 4318828  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||||||||||||||||||||||||    
T  4318829 aggtaggataaaaattagattaagtgtatt 4318858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 7234942 - 7235066
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| |||||||||||| ||||||| ||| |||||||||| |||| | ||||| |||||||||| ||| |||||||||||||||||    
T  7234942 gtactattttatcgttggcatttttaacatgcaaacatagttgatgatattatgcgatagtcttaagcgttacactttctggggtgttacacttaaaaca 7235041  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || |||||| ||||||||||||||||    
T  7235042 aggtaggat-aaaattagattaagtg 7235066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 30353265 - 30353393
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  |||||||||||| ||||| | |||||||||| |||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  30353265 gtactattttatcgttgacatttttaacatgcaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgtgggatgttacacttaaaaca 30353364  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    ||  | ||| ||||||||||||||||||||    
T  30353365 aggcatgat-aaaattagattaagtgtatt 30353393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 3879846 - 3879974
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| |||||||| ||||||||    
T  3879846 gtactattttatcgttgacatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacatttaaaaca 3879945  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||| ||||| ||||    
T  3879946 aggtaggat-aaaattagaataagtatatt 3879974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 21017019 - 21017147
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |    
T  21017019 gtactattttatcgttgacatatttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaata 21017118  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    |  |||||| ||||||||||||||| ||||    
T  21017119 acgtaggat-aaaattagattaagtttatt 21017147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 20768359 - 20768236
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||||||| |||||||||| ||| || |||||||||||||||| |||  ||||||||||||||||    
T  20768359 gtactattttatcgttgacatctttaacatgcaaacataattgatgatattatgcgatgatcttaagtgttacactttatgggatgttacacttaaaaca 20768260  T
Q  191 agataggataaaaattagattaagt 215  Q
    |  |||||| |||||||||||||||    
T  20768259 aagtaggat-aaaattagattaagt 20768236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 8513507 - 8513382
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    ||||||||||||||| |||| || ||||||||||||||| | |||||||||| |||||||| | |||||||||||||||||| | |||      ||||||    
T  8513507 cggtactattttatcattggcatctttaacatggaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgtagggtg------ttaaaa 8513414  T
Q  189 caagataggataaaaattagattaagtgtatt 220  Q
    |||| ||||||||||||||||| |||||||||    
T  8513413 caaggtaggataaaaattagatcaagtgtatt 8513382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 15491884 - 15491768
Alignment:
Q  99 ttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagatagga 198  Q
    |||||||| | || ||||||||  ||||| |||||||||||| |||||||| | |||||||||||| ||||||| ||||||||||||||| ||| |||||    
T  15491884 ttatcgttagcatctttaacatccaaacagaattgctgatatcatgtgatatttttaagtgttacattttgtggggtgttacacttaaaataaggtagga 15491785  T
Q  199 taaaaattagattaagtg 216  Q
    | ||||||||||||||||    
T  15491784 t-aaaattagattaagtg 15491768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 1946111 - 1945985
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||| | ||||||| |||| ||||    
T  1946111 gtactattttatcgttggaatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttacgcttagaaca 1946012  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||| ||||||||||    
T  1946011 aggtatgat-aaaattatattaagtgta 1945985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 6091088 - 6091221
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatatt-aagtgttacactttgtggagtgttacacttaaaa 188  Q
    ||||||||||||||||| | || ||||| ||| ||||| | ||| ||||||||||||||| | || |||||||||||||||| | ||||||| |||||||    
T  6091088 ggtactattttatcgtttgaatctttaatatgcaaacagagttgatgatattatgtgatagtctttaagtgttacactttgttgggtgttacgcttaaaa 6091187  T
Q  189 caagataggataaaaattagattaagtgtattttt 223  Q
    |||| || ||| |||||||||||||||||| ||||    
T  6091188 caaggtatgat-aaaattagattaagtgtagtttt 6091221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 29182441 - 29182312
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgt-ggagtgttacacttaaaac 189  Q
    |||||||||||||||||| || |||||| || ||| | | |||||||||| |||||||| | |||||||||||||||| | || |||||||||||||||     
T  29182441 gtactattttatcgttggcatctttaacctgcaaatagagttgctgatatcatgtgatagtcttaagtgttacactttatgggggtgttacacttaaaat 29182342  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    | | |||||| ||||||||||||||||||||    
T  29182341 atggtaggat-aaaattagattaagtgtatt 29182312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 6089181 - 6089067
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||||||||| | |||||||||| |||||||| | |||||||||| || |||| |||||      |||||||    
T  6089181 ggtactattttatcgttggcatctttaacatggaaacagagttgctgatatcatgtgatagtcttaagtgttataccttgtagagtg------ttaaaac 6089088  T
Q  190 aagataggataaaaattagat 210  Q
    ||| |||||||||||||||||    
T  6089087 aaggtaggataaaaattagat 6089067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 5627669 - 5627542
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||| | | ||| ||||||||||||||| | |||||| ||||||||||| | ||||||  |||| |||    
T  5627669 ggtactattttatcgttgaaatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtattacactttgtagggtgttatgcttagaac 5627570  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||| ||||||||||    
T  5627569 aaggtatgat-aaaattatattaagtgta 5627542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 7055166 - 7055248
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgta 218  Q
    ||||||||||||||| | |||||||||||||||||| | |||||||||||| |||||| || ||| ||||||| ||||||||||    
T  7055166 tgatattatgtgatagttttaagtgttacactttgtagcgtgttacacttagaacaaggtatgat-aaaattatattaagtgta 7055248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 33892919 - 33893038
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||| || ||||||||| ||||  | |||||||||| ||||||         |||||||||||||||| |||||| || |||||||    
T  33892919 gtactattttattgttggcatctttaacatgcaaactgagttgctgatatcatgtga---------gtgttacactttgtggggtgttatacataaaaca 33893009  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || |||||| ||||||||||||||||||||    
T  33893010 aggtaggat-aaaattagattaagtgtatt 33893038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 5627820 - 5627787
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactga 84  Q
    ||||||||||||||||||||||||| ||||||||    
T  5627820 ttagggagcttctacggtgcagtcaggaaactga 5627787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 1946260 - 1946228
Alignment:
Q  55 ggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||| |||||||||||    
T  1946260 ggagcttctacggtgcagtcaggaaactgactt 1946228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 238420 - 238544
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||  ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  238420 tattttatcgttggcatctttaacatacaaacatagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaacaaggt 238519  T
Q  195 aggataaaaattagattaagtgtatt 220  Q
    || || ||||||||||||||||||||    
T  238520 agaat-aaaattagattaagtgtatt 238544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 15383207 - 15383080
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| | ||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| |||    
T  15383207 ggtactattttatcgttggaatctttaacatgcatacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacgcttataac 15383108  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  15383107 aaggtaggat-aaaattagattaagtgta 15383080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 39393659 - 39393528
Alignment:
Q  89 cggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaa 188  Q
    ||||||||||||||| |||| || ||||||||||||||| | ||||| |||| || ||||| | |||||||||||||||||| |  ||||||||||||||    
T  39393659 cggtactattttatcattggcatctttaacatggaaacagagttgctaatatcatatgatagtcttaagtgttacactttgtaggatgttacacttaaaa 39393560  T
Q  189 caagataggataaaaattagattaagtgtatt 220  Q
    |||| ||||||||||||||||| |||||||||    
T  39393559 caaggtaggataaaaattagatgaagtgtatt 39393528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 27227389 - 27227514
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||  || ||||||||| ||||||| ||| |||||| |||||||| | ||||||||| |||||||||| ||||||||||||||||||    
T  27227389 tactattttatcgttgacatctttaacatgcaaacatagttgatgatatcatgtgatagtcttaagtgttgcactttgtggggtgttacacttaaaacaa 27227488  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | |||||| ||||||||||||||||||    
T  27227489 ggtaggat-aaaattagattaagtgta 27227514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 2960020 - 2959896
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||| | |||||||||||| |||||||  |||||||||| ||||||    
T  2960020 tactattttatcgttggcatctttaacatgcaaacatatttgatgatattatgtgatagtcttaagtgttacaatttgtgggatgttacacttgaaacaa 2959921  T
Q  192 gataggataaaaattagattaagtgt 217  Q
    | |||||| |||||||||||||||||    
T  2959920 ggtaggat-aaaattagattaagtgt 2959896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 7078967 - 7079094
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||| |||||| |||||||| | |||||| ||| ||||||||| ||||||||||||||||||    
T  7078967 tactattttatcgttggcatctttaacatgcaaacagagttgttgatatcatgtgatagtcttaagtcttatactttgtggggtgttacacttaaaacaa 7079066  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | |||||| ||||||||||||||||||||    
T  7079067 ggtaggat-aaaattagattaagtgtatt 7079094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 30326859 - 30326986
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||||||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| |||||| |    
T  30326859 tattttatcgttggaatctttaacatgcaaacatagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacgcttataacaaggt 30326958  T
Q  195 aggataaaaattagattaagtgtattttt 223  Q
    ||||| ||||| |||||||||||| ||||    
T  30326959 aggat-aaaatgagattaagtgtagtttt 30326986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 32267308 - 32267181
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||| ||||| || ||||||||| ||||| | ||| ||||||||||||||| | || ||||||||||||||||||||||||| |||| |||    
T  32267308 ggtactattttatagttggaatatttaacatgcaaacaaagttgatgatattatgtgatagtcttgagtgttacactttgtggagtgttacgcttataac 32267209  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  32267208 aaggtaggat-aaaattagattaagtgta 32267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 8222401 - 8222275
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| ||||    
T  8222401 gtactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgatagttttaagtgttacactttgtggggtgttacgcttataaca 8222302  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||| ||||||||||||    
T  8222301 aggtaggat-aaaatgagattaagtgta 8222275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 25160905 - 25160779
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||| ||||||||| |||||||||||| ||||    
T  25160905 gtactattttatcgttggaatctttaacatgcaaacaaagttgatgatattatgtgatagttttaagtgttatactttgtggggtgttacacttataaca 25160806  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||| ||||||||||||    
T  25160805 aggtaggat-aaaatgagattaagtgta 25160779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 27532884 - 27533011
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || |||||| || ||||| |||||||||||| |||||||| | || ||||||||||||||||  |||||||||||||||||    
T  27532884 gtactattttatcgttggcatctttaacttgcaaacagaattgctgatatcatgtgatagtcttgagtgttacactttgtgaggtgttacacttaaaaca 27532983  T
Q  191 agataggataaaaattagattaagtgtatt 220  Q
    || ||||||||||  | |||||||||||||    
T  27532984 aggtaggataaaa--ttgattaagtgtatt 27533011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 32216324 - 32216216
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||||| | ||  ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  32216324 tattttatcgttggaatctttaacatgcaaacagagtttatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaacaaggt 32216225  T
Q  195 aggataaaa 203  Q
    |||||||||    
T  32216224 aggataaaa 32216216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 47279461 - 47279334
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||| ||||| || ||||||||| ||||||| ||| |||||| |||||||| | |||||||||||||||| |||  ||||||| |||||||||    
T  47279461 tactattttattgttggcatctttaacatgcaaacatagttgttgatatcatgtgatagtcttaagtgttacactttatgggatgttacaattaaaacaa 47279362  T
Q  192 gataggataaaaattagattaagtgtatt 220  Q
    | |||||| ||||||||||||||||||||    
T  47279361 ggtaggat-aaaattagattaagtgtatt 47279334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 15752298 - 15752176
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||| ||||||| |||||||||||| ||||| | ||  ||||||||||||||| | |||||||||||||||| ||| ||||||| ||||||||||| |    
T  15752298 tattttgtcgttggaatttttaacatgcaaacagagttaatgatattatgtgatactcttaagtgttacactttatggggtgttacgcttaaaacaaggt 15752199  T
Q  195 aggataaaaattagattaagtgta 218  Q
    ||||| ||||||||||||||||||    
T  15752198 aggat-aaaattagattaagtgta 15752176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 16415919 - 16415793
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||| ||||| | ||||| || ||||||||||||||    
T  16415919 gtactattttatcgttggcatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtattacaatatgtggggtattacacttaaaaca 16415820  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  16415819 aggtaggat-aaaattagattaagtgta 16415793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 38823488 - 38823359
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    |||| |||||||||||||| || | ||||||| ||||| | |||||||||| |||||||| | |||||||||||||||||| | |||||||||||||||     
T  38823488 ggtattattttatcgttggcatctctaacatgcaaacagagttgctgatatcatgtgatagtcttaagtgttacactttgttgggtgttacacttaaaat 38823389  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||  |||||| ||||||||||||||||||||    
T  38823388 aaagtaggat-aaaattagattaagtgtatt 38823359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 4330554 - 4330430
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| |||  || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||| ||||||| |||||||||||||||||    
T  4330554 gtactattttatctttgacatctttaacatgcaaaaagagttgatgatattatgtgatagtcttaagtgttacattttgtggggtgttacacttaaaaca 4330455  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || |||||| ||||||||||||||||    
T  4330454 aggtaggat-aaaattagattaagtg 4330430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 33725503 - 33725627
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| |||||||||| |||| | |||| ||||||||||| ||| |||||||||||||||||    
T  33725503 gtactattttatcgttgacatctttaacatgcaaacatagttgatgatattatgcgatagtcttaaatgttacactttctggggtgttacacttaaaaca 33725602  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || |||| | ||||||||||||||||    
T  33725603 aggtagggt-aaaattagattaagtg 33725627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 40885086 - 40884962
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    ||||||||||||| | || || ||||||||| ||||||| ||| |||||||||| |||| | ||||||||||||||||  ||| ||||||||||||||||    
T  40885086 gtactattttatcatcggcatctttaacatgcaaacatagttgatgatattatgcgatagtcttaagtgttacacttttcggaatgttacacttaaaaca 40884987  T
Q  191 agataggataaaaattagattaagtg 216  Q
    ||||||||| |||| |||||||||||    
T  40884986 agataggat-aaaactagattaagtg 40884962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 9902956 - 9903083
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||| ||||||| ||||||||||| ||||    
T  9902956 ggtactattttatcgttgtcatctttaacatgcaaacaaatttgatgatattatgtgatagtcttaagtgttacattttgtggggtgttacacttgaaac 9903055  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||  || ||| ||||||||||||||||||    
T  9903056 aatgtaagat-aaaattagattaagtgta 9903083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 10181910 - 10182037
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||| ||| ||||  || ||||||||  || || | ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  10181910 ggtactattgtattgttgtcatctttaacatacaaccagagttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacacttaaaac 10182009  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| |||||| ||||||||||||||||||    
T  10182010 aaggtaggat-aaaattagattaagtgta 10182037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 22170980 - 22170858
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||||||| |||||||| || ||||||| |    
T  22170980 tattttatcgttgacatctttaacatgcaaacagatttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacatttgaaacaaggt 22170881  T
Q  195 aggataaaaattagattaagtgta 218  Q
    |||||  |||||||||||||||||    
T  22170880 aggat-gaaattagattaagtgta 22170858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 51129132 - 51129006
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | |||| ||||||||||||||| |||||||||||| ||||    
T  51129132 gtactattttatcgttgaaatctttaacatgcaaacagagttgatgatattatgtgatagttttaattgttacactttgtggggtgttacacttataaca 51129033  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || || ||| ||||||| ||||||||||    
T  51129032 aggtatgat-aaaattatattaagtgta 51129006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 15168369 - 15168248
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||||| ||| |||||||||| ||||   |||||||||||||||| ||  |||||||||||||||||    
T  15168369 gtactattttatcgttgacatctttaacatgcaaacatagttgatgatattatgcgatagccttaagtgttacactttctgaggtgttacacttaaaaca 15168270  T
Q  191 agataggataaaaattagattaa 213  Q
    || |||||| |||||||||||||    
T  15168269 aggtaggat-aaaattagattaa 15168248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 37451557 - 37451432
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | |||||||||||||||| ||  |||||||||||| |||||    
T  37451557 tactattttatcgttggaatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttacactttttgaggtgttacacttataacaa 37451458  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | |  ||| ||||||||||||||||||    
T  37451457 ggtcagat-aaaattagattaagtgta 37451432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 192
Target Start/End: Original strand, 47682396 - 47682498
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||||||| ||| ||||||||| ||||| | |||||||||||||||||||  ||||||||||||||||    
T  47682396 ggtactattttatcgttgacatctttaacatgcaaacatagttgatgatattatatgatagtcttaagtgttacactttgtgaggtgttacacttaaaac 47682495  T
Q  190 aag 192  Q
    |||    
T  47682496 aag 47682498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 1359837 - 1359922
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagt 175  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||    
T  1359837 ggtactattttatcgttggaatctttaacatgcaaacatagttgatgatattatatgataatcttaagtgttacactttgtggagt 1359922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 42721290 - 42721186
Alignment:
Q  113 tttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagatta 212  Q
    ||||||||| ||||| | ||| |||||||| |||||||| |||||||||| ||||||||| || |||||||||||||||| |||||| ||||||||||||    
T  42721290 tttaacatgcaaacaaagttgatgatattacgtgataatcttaagtgttatactttgtggggtattacacttaaaacaaggtaggat-aaaattagatta 42721192  T
Q  213 agtgta 218  Q
    ||||||    
T  42721191 agtgta 42721186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 27267104 - 27267228
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||  || ||||||||| ||||| | ||| ||||||||||||||| | ||||||||| |||||||||| |||||||||| |||||||    
T  27267104 tactattttatcgttgacatctttaacatgcaaacagagttgatgatattatgtgatagtcttaagtgttgcactttgtggggtgttacactcaaaacaa 27267203  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | |||  |  |||||||||||||||||    
T  27267204 ggtagatt--aaattagattaagtgta 27267228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 18422918 - 18422798
Alignment:
Q  97 ttttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagatag 196  Q
    |||||||||||| || ||||||||| ||||  |  || ||||||||||||||| | |||||||||||||||||||| ||||||| | || |||||| |||    
T  18422918 ttttatcgttggaatctttaacatgcaaacggaggtgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcatataacaaggtag 18422819  T
Q  197 gataaaaattagattaagtgta 218  Q
    ||| ||||||||||||||||||    
T  18422818 gat-aaaattagattaagtgta 18422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 1547508 - 1547421
Alignment:
Q  135 tgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaaattagattaagtgtattttt 223  Q
    |||||| |||||||| | || ||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  1547508 tgatatcatgtgatagttttgagtgttacactttgtggggtgttacacttaaaacaaagtaggat-aaaattagattaagtgtattttt 1547421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 41926430 - 41926310
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||| ||||| || ||||||||| ||||| | ||| ||||||||| | ||||      ||||||||||||||||||||||||||||||||||    
T  41926430 gtactattttattgttggcatctttaacatgcaaacagagttgatgatattatttaataa------gtgttacactttgtggagtgttacacttaaaaca 41926337  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    |  |||||| ||||||||||||||||||    
T  41926336 aagtaggat-aaaattagattaagtgta 41926310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 3309427 - 3309292
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtgga-----gtgttacactt 184  Q
    ||||||||||||||||||| || ||||||||  ||||| | |||||||||| || ||||| | ||||||||||||||| ||| |     |||||||| ||    
T  3309427 ggtactattttatcgttggcatctttaacatacaaacagagttgctgatatcatttgatagtcttaagtgttacacttagtgtagtgaggtgttacattt 3309328  T
Q  185 aaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||||  |||| ||||||||||||||||||||||    
T  3309327 aaaacaaagtaggttaaaaattagattaagtgtatt 3309292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 19899672 - 19899798
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||| | ||||||| |||| ||||    
T  19899672 gtactattttatcgttggaatctttaacatgcaaatagagttggtgatattatgtgatagtcttaagtgttacactttgtagggtgttacgcttagaaca 19899771  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    |  || ||| ||||||| ||||||||||    
T  19899772 atgtatgat-aaaattatattaagtgta 19899798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 3535197 - 3535077
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||| || ||||||||| ||||| | |||||||||| ||||         |||||||||||||||||| ||||||||||||||||    
T  3535197 ggtactattttatcgttggcatctttaacatgcaaacagagttgctgatatcatgt---------aagtgttacactttgtggggtgttacacttaaaac 3535107  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    |||  ||||| ||||||||||||| ||||||    
T  3535106 aaggcaggat-aaaattagattaaatgtatt 3535077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 27563809 - 27563934
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||| | || ||||||||| ||||| | ||| ||| ||||| ||||| | ||||||||| | |||||||| || ||| |||||||||||    
T  27563809 tactattttatcgtttgcatctttaacatgcaaacagagttgatgaaattatatgatagtcttaagtgttcctctttgtggggtattatacttaaaacaa 27563908  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | |||||| ||||||||||||||||||    
T  27563909 ggtaggat-aaaattagattaagtgta 27563934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 34012286 - 34012406
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| |     |||||||| ||||||| ||||||||||| ||||||    
T  34012286 tactattttatcgttggcatctttaacatgcaaacagatttgatgatattatgtgatagt-----gtgttacattttgtggggtgttacacttgaaacaa 34012380  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | | |||| ||||||||||||||||||    
T  34012381 ggttggat-aaaattagattaagtgta 34012406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 38759784 - 38759694
Alignment:
Q  113 tttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagataggataaaa 203  Q
    ||||||||| ||||||| ||| ||||||||| ||||| | | |||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  38759784 tttaacatgcaaacatagttggtgatattatctgatagtctcaagtgttacactttgtggggtgttacacttaaaataagatatgataaaa 38759694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 23999621 - 23999494
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||||||||||  || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||| | ||||||  |||| |||    
T  23999621 ggtactattttatcgttgaaatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttatgcttagaac 23999522  T
Q  190 aagataggataaaaattagattaagtgta 218  Q
    ||| || ||| ||||||| ||||||||||    
T  23999521 aaggtatgat-aaaattatattaagtgta 23999494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 27763215 - 27763340
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||||||||| || ||||||||| ||| | | ||| | ||||||||||||| | |||||| ||||||||||| | ||||||| |||| ||| |    
T  27763215 tactattttatcgttggaatctttaacatgcaaatagagttgattatattatgtgatagtcttaagtattacactttgtagggtgttacgcttagaacta 27763314  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | || ||| ||||||||||||||||||    
T  27763315 ggtatgat-aaaattagattaagtgta 27763340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 48620902 - 48620782
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaac 189  Q
    ||||||||||  ||||||| || ||||||||| ||||| | |||||||||| ||||||         |||||||||||||||| ||||||||||||||||    
T  48620902 ggtactatttattcgttggcatctttaacatgcaaacagagttgctgatatcatgtga---------gtgttacactttgtggggtgttacacttaaaac 48620812  T
Q  190 aagataggataaaaattagattaagtgtatt 220  Q
    ||  |||||| ||||||||||||||||||||    
T  48620811 aaagtaggat-aaaattagattaagtgtatt 48620782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 28769927 - 28769799
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgt-ggagtgttacacttaaaa 188  Q
    ||||||||||||||||||  || ||||||||| ||||| |  || ||||||||||||||| | ||||| |||||||||||| || |||||||  ||| ||    
T  28769927 ggtactattttatcgttgaaatctttaacatgcaaacagaggtgatgatattatgtgatagtcttaagcgttacactttgtgggggtgttacgtttataa 28769828  T
Q  189 caagataggataaaaattagattaagtgta 218  Q
    |||| || ||| ||||||||||||||||||    
T  28769827 caaggtatgat-aaaattagattaagtgta 28769799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 30254692 - 30254573
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||| || ||||||||| ||||| | ||| || |||||||||| | | |||||||||||||||| | | ||||||  |||| |||||| |    
T  30254692 tattttatcgttggaatctttaacatgcaaacagagttgatgttattatgtgacagtcttaagtgttacactttatagggtgttatgcttataacaaggt 30254593  T
Q  195 aggataaaaattagattaagt 215  Q
    ||||| |||||||||||||||    
T  30254592 aggat-aaaattagattaagt 30254573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 10922999 - 10922874
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaa 191  Q
    ||||||||||| ||  | || ||||||||| ||||| | ||| ||||||||||||| | | |||||||||||||||||||  ||||||| |||| |||||    
T  10922999 tactattttattgtcagaatctttaacatgcaaacagagttgatgatattatgtgacagtcttaagtgttacactttgtgaggtgttacccttataacaa 10922900  T
Q  192 gataggataaaaattagattaagtgta 218  Q
    | || ||| ||||| ||||||||||||    
T  10922899 ggtatgat-aaaataagattaagtgta 10922874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 46931683 - 46931593
Alignment:
Q  90 ggtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttac 180  Q
    ||||||||||||||||||  || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||| | |||||||    
T  46931683 ggtactattttatcgttgaaatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttac 46931593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 14758305 - 14758190
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || ||||||||| ||||||| ||| |||||||||| |||| | ||||         ||| ||| |||||||||||||||||    
T  14758305 gtactattttatcgttggcatctttaacatgcaaacatagttgatgatattatgcgatagtcttaa---------tttctggggtgttacacttaaaaca 14758215  T
Q  191 agataggataaaaattagattaagtg 216  Q
    || |||||| ||||||||||||||||    
T  14758214 aggtaggat-aaaattagattaagtg 14758190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 31621452 - 31621580
Alignment:
Q  91 gtactattttatcgttggtattt-----ttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacactta 185  Q
    |||||||||||||||||| || |     |||||||| ||||||| ||| |||||||||| |||| | |||||||| |||| || ||| || || ||||||    
T  31621452 gtactattttatcgttggcatctttaacttaacatgcaaacatagttgttgatattatgcgatagtcttaagtgtcacac-ttctggggtattgcactta 31621550  T
Q  186 aaacaagataggataaaaattagattaagtg 216  Q
    ||||||| |||||| ||||||||||||||||    
T  31621551 aaacaaggtaggat-aaaattagattaagtg 31621580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 28564690 - 28564810
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaagat 194  Q
    |||||||||||||  || ||||||||| ||||| | ||| |||||||||||||||   ||||||||||||||||  || ||||||  |||| ||||||      
T  28564690 tattttatcgttgaaatctttaacatgcaaacagagttgatgatattatgtgata--gttaagtgttacactttacggggtgttatgcttataacaaggc 28564787  T
Q  195 aggataaaaattagattaagtgta 218  Q
    | ||| ||||||||||||||||||    
T  28564788 atgat-aaaattagattaagtgta 28564810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 48353814 - 48353735
Alignment:
Q  92 tactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtgg 172  Q
    ||||||||||||||||  || ||||||||| ||||| | |||||||||| |||||||| | || |||||||||||||||||    
T  48353814 tactattttatcgttgacatctttaacatgcaaacagagttgctgatatcatgtgatagtctt-agtgttacactttgtgg 48353735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 48621011 - 48620977
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||||||||||||||||    
T  48621011 agggagcttctacggtgcagtcatgaaactgactt 48620977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 48353966 - 48353933
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactga 84  Q
    ||||||||||||||||||||||||||||||||||    
T  48353966 ttagggagcttctacggtgcagtcatgaaactga 48353933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 31963040 - 31963005
Alignment:
Q  52 tagggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||| |||||||||||||    
T  31963040 tagggagcttctacggtgcagttatgaaactgactt 31963005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 14758454 - 14758420
Alignment:
Q  53 agggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||| |||||||||||    
T  14758454 agggagcttctacggtgcagtcacgaaactgactt 14758420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 27532737 - 27532767
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactga 84  Q
    |||||||||||||||||||||||||||||||    
T  27532737 gggagcttctacggtgcagtcatgaaactga 27532767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 11742338 - 11742382
Alignment:
Q  175 tgttacacttaaaacaagataggataaaaattagattaagtgtatt 220  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||    
T  11742338 tgttacacttaaaacaaggtaagat-aaaattagattaagtgtatt 11742382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 34012137 - 34012170
Alignment:
Q  54 gggagcttctacggtgcagtcatgaaactgactt 87  Q
    |||||||||||||||||||||| |||||||||||    
T  34012137 gggagcttctacggtgcagtcaggaaactgactt 34012170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 11742271 - 11742347
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactt 167  Q
    |||||||||||||||||  || ||||||||  ||| | | |||||||||| |||||||| | |||| ||||||||||    
T  11742271 gtactattttatcgttgacatctttaacatacaaagagagttgctgatatcatgtgatagtcttaattgttacactt 11742347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 32267458 - 32267422
Alignment:
Q  51 ttagggagcttctacggtgcagtcatgaaactgactt 87  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  32267458 ttagggagcttctacggtgcagtcaggaaattgactt 32267422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 267558 - 267435
Alignment:
Q  95 tattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatatt-aagtgttacactttgtggagtgttacacttaaaacaaga 193  Q
    |||||||||||||| || ||||||||| ||||| | ||| ||||||||||||||| | || ||||||||||||||||||  ||||||| ||||||||||     
T  267558 tattttatcgttggcatctttaacatgcaaacaaagttgatgatattatgtgatagtctttaagtgttacactttgtgggatgttacatttaaaacaagg 267459  T
Q  194 taggataaaaattagattaagtgta 218  Q
    |||||| ||||||||||||||||||    
T  267458 taggat-aaaattagattaagtgta 267435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 8164 - 8038
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||| || |||||||||  ||||   ||| ||||||||||||||| | |||||||||||||||||||| ||||||| |||| | ||    
T  8164 gtactattttatcgttggaatctttaacatgcgaacaacgttgatgatattatgtgatagtcttaagtgttacactttgtggggtgttacgcttatagca 8065  T
Q  191 agataggataaaaattagattaagtgta 218  Q
    || |||||| ||||||||||||||||||    
T  8064 agttaggat-aaaattagattaagtgta 8038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 145926 - 146050
Alignment:
Q  93 actattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaacaag 192  Q
    |||||||||||||||| || ||||||||| ||| | | ||| ||||||||||||||| | |||||||||||||||||| | ||||||  |||| ||||||    
T  145926 actattttatcgttggaatctttaacatgcaaatagagttgatgatattatgtgatagtcttaagtgttacactttgtagggtgttatgcttagaacaag 146025  T
Q  193 ataggataaaaattagattaagtgta 218  Q
     || ||| ||||||| ||||||||||    
T  146026 gtatgat-aaaattatattaagtgta 146050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 44233 - 44122
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| |||||||||||||||   |||||||||||||||||||| ||||||  |||| ||||    
T  44233 gtactattttatcgttgaaatctttaacatgcaaacaaagttgatgatattatgtgatagc-ttaagtgttacactttgtggggtgttaagcttataaca 44135  T
Q  191 agataggataaaa 203  Q
    ||||| |||||||    
T  44134 agatatgataaaa 44122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 154554 - 154665
Alignment:
Q  91 gtactattttatcgttggtatttttaacatggaaacataattgctgatattatgtgataatattaagtgttacactttgtggagtgttacacttaaaaca 190  Q
    |||||||||||||||||  || ||||||||| ||||| | ||| |||||||||||||| |  |||||||||||||||||||| ||||||  |||| ||||    
T  154554 gtactattttatcgttgaaatctttaacatgcaaacaaagttgatgatattatgtgat-agcttaagtgttacactttgtggggtgttaagcttataaca 154652  T
Q  191 agataggataaaa 203  Q
    ||||| |||||||    
T  154653 agatatgataaaa 154665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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