View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16929_high_55 (Length: 216)
Name: NF16929_high_55
Description: NF16929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16929_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 3144704 - 3144550
Alignment:
| Q |
1 |
aacatgaaactaacctgacaaacttgccatcagattgaagtgcatcaggctttgaacccaacttcataaacttcannnnnnnnnnnnnnnnnncttgaaa |
100 |
Q |
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| T |
3144704 |
aacatgaaactaacctgacaaacttgccatcagattgaagtgcatcaggctttgaacccaacttcataaacttca-tttttgtttctttttttcttgaaa |
3144606 |
T |
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| Q |
101 |
accaaacaaagaaagtagggtcacgtatgttgagaagtaagacagtgaaagaaagc |
156 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
3144605 |
accaaacaaagaaagtaggatcacgtatgttgagaagtaagacagtgaaagaaagc |
3144550 |
T |
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