View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1693-Insertion-1 (Length: 388)
Name: NF1693-Insertion-1
Description: NF1693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1693-Insertion-1 |
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Alignment Details
Target: chr8 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 7 - 382
Target Start/End: Complemental strand, 9973807 - 9973432
Alignment:
| Q |
7 |
agaaacgatttgactgggatcttagcaggttgaactataaagatgtgaggaaatttgcaattctacgcggcttgtgtcacaaggtactggagtctggaaa |
106 |
Q |
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| T |
9973807 |
agaaacgatttgactgggatcttagcaggttgaactataaagatgtgcggaaatttgcaattctacgcggcttgtgtcacaaggtactggagtctggaaa |
9973708 |
T |
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| Q |
107 |
ttgttaatagttgataaaaactctggtttctgttattacttgctcttgcattacagattacgttgttatgaagtaatatactgtgccagattttgtgatt |
206 |
Q |
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| T |
9973707 |
ttgttaatagttgataaaaactctggtttctgttattacttgctcttgcattacagattacgttgttatgaagtaatatactgtgccagattttgtgatt |
9973608 |
T |
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| Q |
207 |
cattttgacaagtatttgttggttggttataagttcagttactataaaagtagatagggacctgttgaggtattaggtaagctgaattttgcactttaat |
306 |
Q |
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| T |
9973607 |
cattttggcaagtatttgttggttggttataagttcagttactataaaagtagatagggacctgttgaggtattaggtaagctgaattttacactttaat |
9973508 |
T |
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| Q |
307 |
attgtcaccgtatacattaaagaaaatgagtttgagttttacttctctgtgaagttgaagtagcctcaagtaatta |
382 |
Q |
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| T |
9973507 |
attgtcaccgtacacattaaagaaaatgagtttgagttttacttctctgtgaagttgaaatagcctcaagtaatta |
9973432 |
T |
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