View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16930_high_20 (Length: 263)

Name: NF16930_high_20
Description: NF16930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16930_high_20
NF16930_high_20
[»] chr8 (35 HSPs)
chr8 (17-172)||(6354726-6354882)
chr8 (114-165)||(36366110-36366161)
chr8 (107-165)||(12958780-12958838)
chr8 (114-167)||(24915253-24915306)
chr8 (109-165)||(10839769-10839825)
chr8 (114-165)||(35011223-35011274)
chr8 (114-165)||(44796353-44796404)
chr8 (117-166)||(10184636-10184685)
chr8 (118-167)||(16448873-16448922)
chr8 (105-166)||(34711083-34711144)
chr8 (114-166)||(7693118-7693170)
chr8 (113-161)||(15726849-15726897)
chr8 (117-165)||(42786378-42786426)
chr8 (114-165)||(6899431-6899482)
chr8 (114-165)||(22429546-22429597)
chr8 (114-165)||(24177983-24178034)
chr8 (120-167)||(38298585-38298632)
chr8 (120-167)||(43932133-43932180)
chr8 (113-167)||(8453678-8453732)
chr8 (109-166)||(13831445-13831503)
chr8 (118-172)||(14578514-14578568)
chr8 (114-167)||(5031475-5031528)
chr8 (117-166)||(6354662-6354710)
chr8 (109-166)||(7693039-7693096)
chr8 (122-167)||(24599753-24599798)
chr8 (117-166)||(24915184-24915233)
chr8 (114-166)||(6899504-6899556)
chr8 (114-166)||(8793804-8793856)
chr8 (114-166)||(12958860-12958912)
chr8 (114-166)||(15720210-15720262)
chr8 (114-166)||(22429619-22429671)
chr8 (114-166)||(24822808-24822860)
chr8 (114-162)||(32575182-32575230)
chr8 (114-166)||(40483294-40483346)
chr8 (114-166)||(44796426-44796478)
[»] scaffold0110 (1 HSPs)
scaffold0110 (117-166)||(1617-1666)
[»] chr5 (24 HSPs)
chr5 (114-167)||(27488358-27488411)
chr5 (117-166)||(11142448-11142497)
chr5 (114-167)||(15968322-15968375)
chr5 (113-165)||(38394438-38394490)
chr5 (114-165)||(22731344-22731395)
chr5 (118-167)||(35349497-35349546)
chr5 (114-166)||(29299368-29299420)
chr5 (109-165)||(36286065-36286121)
chr5 (118-169)||(28499793-28499844)
chr5 (114-165)||(29031122-29031173)
chr5 (117-167)||(1138301-1138351)
chr5 (117-159)||(8235469-8235511)
chr5 (114-168)||(12115087-12115141)
chr5 (117-167)||(36434762-36434812)
chr5 (116-165)||(1015241-1015290)
chr5 (117-165)||(26327549-26327598)
chr5 (114-166)||(1015167-1015219)
chr5 (114-166)||(1138229-1138281)
chr5 (102-166)||(6499980-6500044)
chr5 (114-166)||(15968395-15968447)
chr5 (114-166)||(22731270-22731322)
chr5 (114-158)||(26163972-26164016)
chr5 (117-169)||(35463963-35464015)
chr5 (114-166)||(36417132-36417184)
[»] chr2 (65 HSPs)
chr2 (114-167)||(20555269-20555322)
chr2 (116-167)||(11030276-11030327)
chr2 (114-165)||(45571041-45571092)
chr2 (114-165)||(45574708-45574759)
chr2 (114-165)||(45578375-45578426)
chr2 (114-165)||(45582042-45582093)
chr2 (114-165)||(45585709-45585760)
chr2 (114-165)||(45589376-45589427)
chr2 (114-165)||(45593043-45593094)
chr2 (114-165)||(45596710-45596761)
chr2 (114-165)||(45600377-45600428)
chr2 (114-165)||(45604044-45604095)
chr2 (114-165)||(45607711-45607762)
chr2 (114-165)||(45611378-45611429)
chr2 (114-165)||(45615045-45615096)
chr2 (121-167)||(7833300-7833346)
chr2 (116-165)||(4063285-4063334)
chr2 (113-166)||(43135042-43135094)
chr2 (114-166)||(12486077-12486129)
chr2 (120-167)||(4755479-4755526)
chr2 (114-165)||(45034409-45034460)
chr2 (114-167)||(7943523-7943577)
chr2 (115-165)||(11794461-11794511)
chr2 (101-166)||(5559598-5559663)
chr2 (113-166)||(41153196-41153249)
chr2 (111-159)||(3365367-3365415)
chr2 (114-166)||(5109374-5109426)
chr2 (114-166)||(41205575-41205627)
chr2 (114-165)||(4044660-4044711)
chr2 (118-165)||(15384442-15384489)
chr2 (119-166)||(31943651-31943698)
chr2 (120-159)||(44283625-44283664)
chr2 (112-166)||(7256408-7256462)
chr2 (117-167)||(9152463-9152513)
chr2 (138-168)||(20218625-20218655)
chr2 (118-172)||(27279498-27279552)
chr2 (109-166)||(3838424-3838481)
chr2 (116-165)||(3838503-3838552)
chr2 (113-166)||(4044585-4044638)
chr2 (117-162)||(9121279-9121324)
chr2 (114-167)||(37076229-37076282)
chr2 (114-167)||(38983083-38983136)
chr2 (117-166)||(43713988-43714037)
chr2 (114-166)||(3037810-3037862)
chr2 (114-166)||(4063356-4063408)
chr2 (117-165)||(5559377-5559425)
chr2 (114-166)||(15384511-15384563)
chr2 (102-166)||(28249018-28249082)
chr2 (114-166)||(32457224-32457276)
chr2 (132-172)||(36452468-36452508)
chr2 (127-159)||(41119974-41120006)
chr2 (114-166)||(45034482-45034534)
chr2 (114-166)||(45571114-45571166)
chr2 (114-166)||(45574781-45574833)
chr2 (114-166)||(45578448-45578500)
chr2 (114-166)||(45582115-45582167)
chr2 (114-166)||(45585782-45585834)
chr2 (114-166)||(45589449-45589501)
chr2 (114-166)||(45593116-45593168)
chr2 (114-166)||(45596783-45596835)
chr2 (114-166)||(45600450-45600502)
chr2 (114-166)||(45604117-45604169)
chr2 (114-166)||(45607784-45607836)
chr2 (114-166)||(45611451-45611503)
chr2 (114-166)||(45615118-45615170)
[»] chr3 (27 HSPs)
chr3 (116-167)||(49885392-49885443)
chr3 (114-167)||(45010834-45010887)
chr3 (114-165)||(5177851-5177902)
chr3 (114-166)||(12747782-12747834)
chr3 (114-166)||(33371945-33371997)
chr3 (114-172)||(27108550-27108609)
chr3 (113-167)||(43448968-43449022)
chr3 (117-166)||(8987743-8987792)
chr3 (113-166)||(51723388-51723441)
chr3 (114-166)||(19649664-19649716)
chr3 (114-166)||(48593227-48593279)
chr3 (124-166)||(4980069-4980111)
chr3 (137-167)||(19996070-19996100)
chr3 (121-167)||(44664200-44664246)
chr3 (117-167)||(52864965-52865015)
chr3 (113-167)||(54537453-54537507)
chr3 (117-166)||(28043451-28043500)
chr3 (119-172)||(29290794-29290847)
chr3 (109-166)||(29457846-29457903)
chr3 (116-165)||(29457925-29457974)
chr3 (138-167)||(32711286-32711315)
chr3 (118-167)||(42225577-42225626)
chr3 (113-166)||(43449043-43449096)
chr3 (114-166)||(379081-379133)
chr3 (114-166)||(28406478-28406530)
chr3 (117-165)||(33371875-33371923)
chr3 (114-166)||(33808395-33808446)
[»] chr1 (37 HSPs)
chr1 (114-167)||(49944844-49944897)
chr1 (105-166)||(15343022-15343083)
chr1 (113-166)||(34146889-34146942)
chr1 (114-167)||(38738015-38738068)
chr1 (102-166)||(49184238-49184302)
chr1 (114-165)||(43929431-43929482)
chr1 (117-168)||(45848953-45849004)
chr1 (113-167)||(519917-519971)
chr1 (117-167)||(44939150-44939200)
chr1 (117-166)||(25021245-25021294)
chr1 (116-169)||(25021313-25021366)
chr1 (114-167)||(38040360-38040413)
chr1 (117-169)||(5368852-5368904)
chr1 (117-165)||(6793608-6793656)
chr1 (115-167)||(23923406-23923458)
chr1 (114-166)||(50155383-50155435)
chr1 (107-162)||(26823141-26823196)
chr1 (118-169)||(34890264-34890315)
chr1 (114-165)||(47678341-47678392)
chr1 (114-165)||(47844545-47844596)
chr1 (119-164)||(11386170-11386216)
chr1 (116-167)||(38590150-38590203)
chr1 (121-166)||(1811276-1811321)
chr1 (114-167)||(7375553-7375606)
chr1 (117-166)||(8971242-8971291)
chr1 (117-166)||(15285521-15285570)
chr1 (114-167)||(24305749-24305802)
chr1 (114-167)||(29892214-29892267)
chr1 (116-165)||(33018254-33018303)
chr1 (116-165)||(34662695-34662744)
chr1 (131-172)||(50105684-50105725)
chr1 (114-166)||(26760184-26760236)
chr1 (114-166)||(26924298-26924350)
chr1 (114-166)||(28359007-28359059)
chr1 (124-164)||(35533569-35533609)
chr1 (114-166)||(37515175-37515227)
chr1 (114-166)||(47678267-47678319)
[»] chr4 (43 HSPs)
chr4 (114-166)||(30191907-30191959)
chr4 (114-165)||(3043803-3043854)
chr4 (114-165)||(20745417-20745468)
chr4 (120-167)||(24100776-24100823)
chr4 (120-167)||(24100888-24100935)
chr4 (116-166)||(43117939-43117989)
chr4 (109-166)||(21554193-21554250)
chr4 (116-169)||(26066382-26066435)
chr4 (114-167)||(41116573-41116626)
chr4 (114-167)||(55190750-55190803)
chr4 (114-166)||(45828500-45828552)
chr4 (114-166)||(53225729-53225781)
chr4 (114-165)||(2643619-2643670)
chr4 (114-165)||(20459326-20459377)
chr4 (120-167)||(27587330-27587377)
chr4 (114-165)||(42804267-42804318)
chr4 (114-165)||(43020767-43020818)
chr4 (114-165)||(47866047-47866098)
chr4 (116-162)||(16412247-16412293)
chr4 (114-166)||(42169128-42169180)
chr4 (114-166)||(48361063-48361115)
chr4 (114-165)||(20956901-20956952)
chr4 (120-167)||(36196449-36196496)
chr4 (116-166)||(3043876-3043926)
chr4 (122-172)||(3345396-3345446)
chr4 (120-166)||(29686485-29686531)
chr4 (120-166)||(32645575-32645621)
chr4 (116-166)||(34226400-34226450)
chr4 (117-167)||(44111829-44111879)
chr4 (109-166)||(36132641-36132698)
chr4 (114-167)||(48195901-48195954)
chr4 (113-166)||(55292197-55292250)
chr4 (138-166)||(1140900-1140928)
chr4 (114-166)||(4698708-4698760)
chr4 (114-166)||(8347656-8347708)
chr4 (114-162)||(8826779-8826827)
chr4 (114-166)||(20459252-20459304)
chr4 (113-165)||(27841842-27841893)
chr4 (114-166)||(37991497-37991549)
chr4 (118-166)||(39993123-39993171)
chr4 (114-166)||(43020840-43020892)
chr4 (114-166)||(47866120-47866172)
chr4 (113-165)||(48373428-48373480)
[»] chr7 (26 HSPs)
chr7 (107-166)||(31903035-31903094)
chr7 (114-167)||(8566165-8566218)
chr7 (114-167)||(36245460-36245513)
chr7 (117-166)||(41850610-41850659)
chr7 (109-165)||(4826768-4826824)
chr7 (118-162)||(32811798-32811842)
chr7 (114-165)||(27231919-27231970)
chr7 (114-165)||(32811463-32811514)
chr7 (113-167)||(28677401-28677455)
chr7 (117-166)||(31227507-31227556)
chr7 (113-166)||(32811388-32811441)
chr7 (114-166)||(28020012-28020064)
chr7 (120-167)||(45123329-45123376)
chr7 (112-166)||(31227577-31227631)
chr7 (114-167)||(10007660-10007713)
chr7 (114-167)||(11668099-11668152)
chr7 (121-166)||(16861530-16861575)
chr7 (114-167)||(30869270-30869323)
chr7 (114-167)||(40142857-40142910)
chr7 (114-166)||(1366606-1366658)
chr7 (117-165)||(1366680-1366728)
chr7 (118-166)||(2610202-2610250)
chr7 (114-166)||(4826846-4826898)
chr7 (114-166)||(29365706-29365758)
chr7 (138-166)||(40362005-40362033)
chr7 (119-167)||(45441520-45441568)
[»] chr6 (15 HSPs)
chr6 (117-166)||(7649813-7649862)
chr6 (114-165)||(2810090-2810141)
chr6 (115-165)||(1837045-1837095)
chr6 (114-166)||(1158330-1158382)
chr6 (114-166)||(10283379-10283431)
chr6 (118-166)||(12450366-12450414)
chr6 (127-167)||(33128849-33128889)
chr6 (116-167)||(3064896-3064947)
chr6 (120-167)||(9343137-9343184)
chr6 (114-166)||(766512-766564)
chr6 (114-166)||(2810163-2810215)
chr6 (113-157)||(2937090-2937134)
chr6 (117-162)||(7649888-7649935)
chr6 (113-165)||(8646764-8646816)
chr6 (114-166)||(28630838-28630890)
[»] scaffold0242 (1 HSPs)
scaffold0242 (109-165)||(16513-16569)
[»] scaffold0027 (1 HSPs)
scaffold0027 (120-166)||(5499-5545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (138-166)||(423333-423361)


Alignment Details
Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 6354882 - 6354726
Alignment:
Q  17 ataagtgacaaacatttgtacgtggaggatatctctggtttaacaacaaaatattgaggagttttatttttt-aagcaataaatgttatttcatccaatc 115  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  6354882 ataagtgacagacatttgcacgtggaggatatctctgatttaacaacaaaatattgaggagttttatttttttaagcaataaatattacttcatccaatc 6354783  T
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtatccgatc 172  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6354782 ctatttataagaaataattaattttttagattcattgaataatttatgtattcgatc 6354726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 36366161 - 36366110
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  36366161 tcctatttataagaaaaagttaattttttagattcattcaataattgatgta 36366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 12958780 - 12958838
Alignment:
Q  107 catccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||| ||||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  12958780 catccgatcctatttataagaaaaagttaactttttagattcattcaataattgatgta 12958838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 24915306 - 24915253
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  24915306 tcctatttatatgaaaaaattaactttttagattcattaaataattgatgtatc 24915253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 10839769 - 10839825
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||| |||||||||||||||| |||| | |||||||||||||||||||||| |||||    
T  10839769 tccagtcctatttataagaaaaaattgactttttagattcattgaataattaatgta 10839825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 35011223 - 35011274
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  35011223 tcctatttataagaaaaagttaattttttagattcattcaataattaatgta 35011274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 44796353 - 44796404
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  44796353 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 44796404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 10184685 - 10184636
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| |||  | |||||||||||||||||||||||||||||    
T  10184685 tatttataagaaaaaatcgactttttagattcattgaataattgatgtat 10184636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 16448922 - 16448873
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatc 16448873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 34711083 - 34711144
Alignment:
Q  105 ttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||| || ||||||||| ||| |||| | |||||||||||||||| ||||||||||||    
T  34711083 ttcatccagtcttatttataaaaaaaaattgactttttagattcattgagtaattgatgtat 34711144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 7693170 - 7693118
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | |||||||||||||||| ||||| ||||||    
T  7693170 tcctatttataagaaaaaattgactttttagattcattgagtaattaatgtat 7693118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 15726897 - 15726849
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattga 161  Q
    ||||||||||||||||| |||| | |||||||||||||||| |||||||    
T  15726897 atcctatttataagaaaaaattgactttttagattcattgagtaattga 15726849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 42786378 - 42786426
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  42786378 tatttataagaaaaagttaactttttagattcattcaataattgatgta 42786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 6899431 - 6899482
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||| ||||||||| |||||||||||||    
T  6899431 tcctatttataagaaaaatttaacttttgagattcattcaataattgatgta 6899482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 22429546 - 22429597
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | ||||||||||||||| ||| ||||||| |||||    
T  22429546 tcctatttataagaaaaagttaattttttagatttattcaataattaatgta 22429597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 24177983 - 24178034
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||| ||||||||    
T  24177983 tcctatttataagaaaaagttaactttttagattcattcaatatttgatgta 24178034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 38298632 - 38298585
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||| |||| ||||||||| |||||||||||||| |||||||    
T  38298632 ttataagaaacaattgattttttaggttcattgaataattaatgtatc 38298585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 43932180 - 43932133
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||| |||| | |||||||||||||||||||||| |||||||    
T  43932180 ttataagaaacaattgactttttagattcattgaataattaatgtatc 43932133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 8453732 - 8453678
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||| | || ||||||||||| |||||| |||||||| ||||    
T  8453732 atcctatttataagaaaaatttgattttttagatacattgagtaattgatatatc 8453678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 13831503 - 13831445
Alignment:
Q  109 tccaatcctatttataagaaataa-ttaattttttagattcattgaataattgatgtat 166  Q
    |||| |||||||||||||||| || || | |||||||||||||| ||||||||||||||    
T  13831503 tccagtcctatttataagaaaaaaattgactttttagattcattaaataattgatgtat 13831445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 14578514 - 14578568
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtatccgatc 172  Q
    ||||||||| || ||||||| |||||| |||||||||||||| ||||||| ||||    
T  14578514 atttataagcaaaaattaatattttaggttcattgaataattaatgtatctgatc 14578568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 5031475 - 5031528
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | |||| |||||| ||||||| | |||||||||||||    
T  5031475 tcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatc 5031528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 6354662 - 6354710
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  6354662 tatttataagaaataatgaatttttt-gatttattgaataattaatgtat 6354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 7693039 - 7693096
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||||||| | || | ||||| ||||||||| |||| ||||||||    
T  7693039 tccaatcctatttataagaaacattttacttttttgattcattgcataaatgatgtat 7693096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 24599798 - 24599753
Alignment:
Q  122 ataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||| |||| ||||||||||||||||| |||| |||||||||    
T  24599798 ataagaaacaattgattttttagattcattgtataactgatgtatc 24599753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 24915184 - 24915233
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||| || |||| ||||||| |||||||| ||||||||||||||    
T  24915184 tatttataagtaacaatttatttttttgattcattaaataattgatgtat 24915233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 6899556 - 6899504
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  6899556 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 6899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 8793856 - 8793804
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||||| || | ||||| ||||||||| |||| ||||||||    
T  8793856 tcctatttataagaaatatttgacttttttgattcattgcataaatgatgtat 8793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 12958912 - 12958860
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  12958912 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 12958860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 15720210 - 15720262
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||||| |||||||| | || || ||||||||||||    
T  15720210 tcctatttataagaaaaaattaactttttagacttatagagtaattgatgtat 15720262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 22429671 - 22429619
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  22429671 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 22429619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 24822860 - 24822808
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | |||||||||| |||| |||||| ||||||    
T  24822860 tcctatttataagaaaaaattgactttttagatttattgtataattaatgtat 24822808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 32575182 - 32575230
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgat 162  Q
    ||||||||| |||||| | |||| |||||||||||||| ||||||||||    
T  32575182 tcctatttacaagaaaaagttaactttttagattcattcaataattgat 32575230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 40483294 - 40483346
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||||| |||| |||||  |||||||| |||| ||||||||    
T  40483294 tcctatttataagaaatatttaacttttttaattcattgcataaatgatgtat 40483346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 44796478 - 44796426
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  44796478 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 44796426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 1666 - 1617
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1666 tatttataagaaaaaattaattttttagattcattgaataattgatgtat 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 27488358 - 27488411
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  27488358 tcctatttataagaaaaaattaattttttagattcattcaataattgatgtatc 27488411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 11142497 - 11142448
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  11142497 tatttataagaaacaattcatttttttgattcattgaataattgatgtat 11142448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 15968322 - 15968375
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||| |||||||    
T  15968322 tcctatttataagaaaaagttaattttttagattcattcaataattaatgtatc 15968375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 38394438 - 38394490
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||| |||||    
T  38394438 atcctatttataagaaaaaattgactttttagattcattgaataattaatgta 38394490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 22731395 - 22731344
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  22731395 tcctatttataagaaaaagttaattttttagattcattaaataattaatgta 22731344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 35349546 - 35349497
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||| |||||||| | |||||||||||||||| |||||||||||||    
T  35349546 atttataaaaaataattgactttttagattcattgagtaattgatgtatc 35349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 29299368 - 29299420
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | || |||||||||||||||||| | ||||||||||    
T  29299368 tcctatttataagaaaaatttgattttttagattcattgagtgattgatgtat 29299420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 36286065 - 36286121
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||| |||||||||||||||| || ||||||| ||||||||| |||| |||||||    
T  36286065 tccaattctatttataagaaatacttgatttttttgattcattgcataaatgatgta 36286121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 28499793 - 28499844
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtatccg 169  Q
    ||||||||| || || |||||||||||||||||||||||| | |||||||||    
T  28499793 atttataagcaaaaaataattttttagattcattgaataactaatgtatccg 28499844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 29031173 - 29031122
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| || ||||||||||    
T  29031173 tcctatttataagaaaaagttaactttttagattcattcaacaattgatgta 29031122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 1138351 - 1138301
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||| |||| |||||||| ||||||| ||||||| |||||||    
T  1138351 tatttataagaaaaaattgattttttaaattcattaaataattaatgtatc 1138301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 8235511 - 8235469
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataatt 159  Q
    ||||||||||||| |||| |||||||||||| |||||||||||    
T  8235511 tatttataagaaaaaattgattttttagatttattgaataatt 8235469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 12115141 - 12115087
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatcc 168  Q
    ||||||||||| |||| ||| ||||||||||||||||||  |||||| |||||||    
T  12115141 tcctatttataggaaacaatcaattttttagattcattgcttaattgttgtatcc 12115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 36434812 - 36434762
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||| | |||| |||||||||||||| | |||||||||||||    
T  36434812 tatttataagaaaaatttaactttttagattcattaagtaattgatgtatc 36434762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 1015290 - 1015241
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||| | |||| |||||||||||||| |||||| ||||||    
T  1015290 ctatttataagaaaaagttaactttttagattcattcaataatcgatgta 1015241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 26327549 - 26327598
Alignment:
Q  117 tatttataagaaataa-ttaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||| || |||| |||||||||||||| |||||||||||||    
T  26327549 tatttataagaaaaaaattaactttttagattcattcaataattgatgta 26327598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 1015167 - 1015219
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  1015167 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 1015219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 1138229 - 1138281
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | ||||| |||| ||||||||||| ||||||    
T  1138229 tcctatttataagaaacaatttacttttttgatttattgaataattaatgtat 1138281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 6499980 - 6500044
Alignment:
Q  102 tatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||| |||| ||| ||||||||||||| |||| |  ||||||||| ||| ||||||||||||||    
T  6499980 tattttatccgatcatatttataagaaacaattgacattttagatttattaaataattgatgtat 6500044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 15968447 - 15968395
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  15968447 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 15968395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 22731270 - 22731322
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  22731270 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 22731322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 26163972 - 26164016
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataat 158  Q
    |||||||||||||||| |||| | |||||||||| ||||||||||    
T  26163972 tcctatttataagaaacaattgactttttagatttattgaataat 26164016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 35463963 - 35464015
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatccg 169  Q
    |||||||||| || || ||||||||||| |||||||||||| | |||||||||    
T  35463963 tatttataagcaaaaaataattttttaggttcattgaataactaatgtatccg 35464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 36417184 - 36417132
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | ||||||||| |||| ||||||| ||||||    
T  36417184 tcctatttataagaaacaatttactttttagatacattaaataatttatgtat 36417132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 20555269 - 20555322
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20555269 tcctatttataagaaaaaattaattttttagatacattgaataattgatgtatc 20555322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 11030327 - 11030276
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  11030327 ctatttataagaaaaaattaactttttagattcattgagtaattgatgtatc 11030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45571041 - 45571092
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45571041 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45571092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45574708 - 45574759
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45574708 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45578375 - 45578426
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45578375 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45578426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45582042 - 45582093
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45582042 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45585709 - 45585760
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45585709 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45585760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45589376 - 45589427
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45589376 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45589427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45593043 - 45593094
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45593043 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45593094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45596710 - 45596761
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45596710 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45596761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45600377 - 45600428
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45600377 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45604044 - 45604095
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45604044 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45607711 - 45607762
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45607711 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45607762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45611378 - 45611429
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45611378 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45611429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45615045 - 45615096
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45615045 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45615096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 7833300 - 7833346
Alignment:
Q  121 tataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  7833300 tataagaaacaatcaattttttagattcattgaataattgatgtatc 7833346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 4063285 - 4063334
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  4063285 ctatttataagaaaaagttaattttttagattcattcaataattgatgta 4063334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 43135042 - 43135094
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  43135042 atcctatttataagaaa-aattaattttttagattcattaaataattgacgtat 43135094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 12486129 - 12486077
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| |||||| |||| | |||||||||||||||||||||||||||||    
T  12486129 tcctatttacaagaaacaattgactttttagattcattgaataattgatgtat 12486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 4755479 - 4755526
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  4755479 ttataagaaacaattaattttttagattcattaaataattaatgtatc 4755526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 45034409 - 45034460
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  45034409 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 45034460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 7943577 - 7943523
Alignment:
Q  114 tcctatttataagaaataa-ttaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| || || | ||||||||||||||||||||||||||||||    
T  7943577 tcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatc 7943523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 11794461 - 11794511
Alignment:
Q  115 cctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||| |||||    
T  11794461 cctatttataagaaaaaattgattttttagatttattgaataattaatgta 11794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 5559663 - 5559598
Alignment:
Q  101 ttatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||| ||| ||||||||||||||| ||| || ||||||| ||||||||| |||| ||||||||    
T  5559663 ttatttcctccgatcctatttataagacatatttgatttttttgattcattgcataaatgatgtat 5559598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 41153249 - 41153196
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||| | || | |||||||||||||||| ||||||||||||    
T  41153249 atcctatttataagaaaaagttgactttttagattcattgagtaattgatgtat 41153196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 3365415 - 3365367
Alignment:
Q  111 caatcctatttataagaaataattaattttttagattcattgaataatt 159  Q
    |||||||  ||||||||||||||| ||||||| ||||||||||||||||    
T  3365415 caatccttattataagaaataattgatttttttgattcattgaataatt 3365367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 5109374 - 5109426
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | |||| |||||||||||||||| ||||| ||||||    
T  5109374 tcctatttataagaaaaagttaactttttagattcattgagtaattaatgtat 5109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 41205627 - 41205575
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||| ||||||||||||||||||  ||| ||||||| ||||||    
T  41205627 tcctatttataagagataattaattttttagatatattaaataatttatgtat 41205575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 4044711 - 4044660
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | | || |||||||||||||| |||||||||||||    
T  4044711 tcctatttataagaaaaagtaaaatttttagattcattcaataattgatgta 4044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 15384442 - 15384489
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||| |||||| |||||||||| ||| |||||||||||||    
T  15384442 atttataagaaaaaattaactttttagatttatttaataattgatgta 15384489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 31943698 - 31943651
Alignment:
Q  119 tttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||| |||||||||| | ||||||||||||||||| |||||||||||    
T  31943698 tttatgagaaataatttactttttagattcattgaacaattgatgtat 31943651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 44283664 - 44283625
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataatt 159  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  44283664 ttataagaaataattgactttttagattcattgaataatt 44283625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 7256462 - 7256408
Alignment:
Q  112 aatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| || ||||||||||||| |||||||||||| | ||||||||||| ||||    
T  7256462 aatccttttaataagaaataattcattttttagattaagtgaataattgacgtat 7256408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 9152513 - 9152463
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||| |||||| |||| | |||||||||||||||| |||||||||||||    
T  9152513 tatttacaagaaacaattgactttttagattcattgagtaattgatgtatc 9152463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Complemental strand, 20218655 - 20218625
Alignment:
Q  138 tttttagattcattgaataattgatgtatcc 168  Q
    |||||||||||||||||||||||||||||||    
T  20218655 tttttagattcattgaataattgatgtatcc 20218625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 27279498 - 27279552
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtatccgatc 172  Q
    ||||||||| || || ||||||||||| |||||||||||| | ||||||||||||    
T  27279498 atttataagcaaaaaataattttttaggttcattgaataactaatgtatccgatc 27279552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 3838424 - 3838481
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||| |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  3838424 tccagtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 3838481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 3838552 - 3838503
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||| | |||| |||||||||||||| ||| |||||||||    
T  3838552 ctatttataagaaaaagttaactttttagattcattcaatgattgatgta 3838503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 4044585 - 4044638
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  4044585 atcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 4044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 9121324 - 9121279
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgat 162  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  9121324 tatttataataaacaattaattttttagattcataaaataattgat 9121279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 37076282 - 37076229
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| |||  | |||||||||| |||| ||||||||||||||    
T  37076282 tcctatttataagaaacaatcgactttttagatttattggataattgatgtatc 37076229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 38983136 - 38983083
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||| ||| | || |||||||||||||||||  |||||||||||||    
T  38983136 tcctatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatc 38983083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 43713988 - 43714037
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| |||| ||||||| |||||||||||||| | ||||||    
T  43713988 tatttataagaaacaattgatttttttgattcattgaataaattatgtat 43714037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 3037862 - 3037810
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| || |||||| || | |||||||||||||||||||||||| ||||||    
T  3037862 tcctatatacaagaaacaaatgattttttagattcattgaataatttatgtat 3037810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 4063408 - 4063356
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  4063408 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 4063356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 5559377 - 5559425
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||| | || | |||||||||||||||| |||||||||||    
T  5559377 tatttataagaaaaatttgactttttagattcattgagtaattgatgta 5559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 15384563 - 15384511
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  15384563 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 15384511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 28249082 - 28249018
Alignment:
Q  102 tatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| |||| | |||||||||||||| | || | |||||||||||||| ||||||| ||||||    
T  28249082 tatttcctccagttctatttataagaaaaagttgactttttagattcattaaataattaatgtat 28249018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 32457224 - 32457276
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||||| || | ||||| ||||||||| |||| ||||||||    
T  32457224 tcctatttataagaaatatttgacttttttgattcattgcataaatgatgtat 32457276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 36452508 - 36452468
Alignment:
Q  132 attaattttttagattcattgaataattgatgtatccgatc 172  Q
    |||| |||| |||||||||||||||||||||||||| ||||    
T  36452508 attagttttctagattcattgaataattgatgtatctgatc 36452468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 41119974 - 41120006
Alignment:
Q  127 aaataattaattttttagattcattgaataatt 159  Q
    |||||||| ||||||||||||||||||||||||    
T  41119974 aaataattgattttttagattcattgaataatt 41120006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45034534 - 45034482
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45034534 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45034482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45571166 - 45571114
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45571166 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45571114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45574833 - 45574781
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45574833 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45574781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45578500 - 45578448
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45578500 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45578448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45582167 - 45582115
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45582167 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45582115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45585834 - 45585782
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45585834 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45585782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45589501 - 45589449
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45589501 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45589449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45593168 - 45593116
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45593168 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45593116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45596835 - 45596783
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45596835 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45596783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45600502 - 45600450
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45600502 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45604169 - 45604117
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45604169 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45604117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45607836 - 45607784
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45607836 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45607784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45611503 - 45611451
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45611503 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45611451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45615170 - 45615118
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  45615170 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 45615118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 49885392 - 49885443
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  49885392 ctatttataagaaaaaattaattttttagattcattcaataattgatgtatc 49885443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 45010887 - 45010834
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  45010887 tcctatttataagagaaaattaattttttagatttattgaataattgatgtatc 45010834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 5177902 - 5177851
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  5177902 tcctatttataagaaaaaattaactttttagattcattcaataattgatgta 5177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 12747834 - 12747782
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  12747834 tcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtat 12747782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 33371997 - 33371945
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  33371997 tcctatatataagaaataatttatttttttgattcattgaatagttgatgtat 33371945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 27108609 - 27108550
Alignment:
Q  114 tcctatttataagaaat-aattaattttttagattcattgaataattgatgtatccgatc 172  Q
    |||||||||||| |||| ||||||||||||| ||||||| ||||||| ||||||||||||    
T  27108609 tcctatttataaaaaatcaattaattttttaaattcattaaataatttatgtatccgatc 27108550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 43448968 - 43449022
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||| | || |||||||||||||||||| |||||||| ||||    
T  43448968 atcctatttataagaaaaagttgattttttagattcattgagtaattgatatatc 43449022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 8987743 - 8987792
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| |||||||||||||||||||| |||||||||| | ||||||    
T  8987743 tatttataataaataattaattttttagatgcattgaataacttatgtat 8987792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 51723388 - 51723441
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||| | || |||||||||||||||||| ||||| ||||||    
T  51723388 atcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat 51723441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 19649716 - 19649664
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| |||||| | || |||||||||||||||||| ||||||||||||    
T  19649716 tcctatttacaagaaacatttgattttttagattcattgagtaattgatgtat 19649664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 48593279 - 48593227
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| || |||||| || |||||||||||||||||||||||||| ||||||    
T  48593279 tcctatatacaagaaacaagtaattttttagattcattgaataatttatgtat 48593227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 4980111 - 4980069
Alignment:
Q  124 aagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||| |||||||||||||||||||||| || |||||    
T  4980111 aagaaataattcattttttagattcattgaataactggtgtat 4980069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 167
Target Start/End: Original strand, 19996070 - 19996100
Alignment:
Q  137 ttttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||||||||||||||||||    
T  19996070 ttttttagattcattgaataattgatgtatc 19996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 44664200 - 44664246
Alignment:
Q  121 tataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||| |||||||| ||||||||| |||||||||||||| |||||||    
T  44664200 tataaaaaataattgattttttaggttcattgaataattaatgtatc 44664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 52864965 - 52865015
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||| ||||| | |||| |||||||||||||||| |||||||||||||    
T  52864965 tatttatgagaaaaatttaactttttagattcattgagtaattgatgtatc 52865015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 54537453 - 54537507
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||| | || | |||| ||||||||||| |||||||||||||    
T  54537453 atcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatc 54537507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 28043500 - 28043451
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||  ||| ||| |||||||||||||||||||| ||||||    
T  28043500 tatttataagaaactattgattatttagattcattgaataattaatgtat 28043451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 29290794 - 29290847
Alignment:
Q  119 tttataagaaataattaattttttagattcattgaataattgatgtatccgatc 172  Q
    ||||||||||| |||| | ||||||||||||||||| || ||||||||| ||||    
T  29290794 tttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatc 29290847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 29457846 - 29457903
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||| |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  29457846 tccagtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 29457903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 29457974 - 29457925
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||| | |||| |||||||||||||| ||| |||||||||    
T  29457974 ctatttataagaaaaagttaactttttagattcattcaatgattgatgta 29457925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 32711315 - 32711286
Alignment:
Q  138 tttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||||||||||||||||    
T  32711315 tttttagattcattgaataattgatgtatc 32711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 42225577 - 42225626
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||| |||||| |||||||||||||||| |||||||||||  |||||||    
T  42225577 atttacaagaaaaaattaattttttagatacattgaataatgtatgtatc 42225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 43449096 - 43449043
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||||| || ||||||| | ||||||| |||| ||||||||    
T  43449096 atcctatttataagaaatatttgatttttttggttcattgtataaatgatgtat 43449043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 379081 - 379133
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| |||| | |||||||||||||||| |||| ||||||| ||||||    
T  379081 tcctatttacaagagacaattaattttttagatacattaaataatttatgtat 379133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 28406478 - 28406530
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| |||||| |||| | ||||||||||| |||||||||| ||||||    
T  28406478 tcctatttacaagaaacaattgactttttagattcgttgaataattaatgtat 28406530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 33371875 - 33371923
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||| | ||||||||||| ||| ||| |||||||||||||    
T  33371875 tatttataagaaaaagttaattttttaaatttattcaataattgatgta 33371923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 33808446 - 33808395
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | |||||| ||| ||||||||||||||||||    
T  33808446 tcctatttataagaaa-aattgactttttaaattaattgaataattgatgtat 33808395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 49944844 - 49944897
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  49944844 tcctatttataagaaaaatttaactttttagattcattgaataattgatgtatc 49944897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 15343083 - 15343022
Alignment:
Q  105 ttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||| ||||||||||||||||||| || ||||||| ||||||||| |||| ||||||||    
T  15343083 ttcatcctatcctatttataagaaatatttgatttttttgattcattgcataaatgatgtat 15343022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 34146942 - 34146889
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||    
T  34146942 atcctatttataagaaaaaattgatttttttgattcattgaataattaatgtat 34146889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 38738068 - 38738015
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  38738068 tcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatc 38738015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 49184238 - 49184302
Alignment:
Q  102 tatttcatccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| |||| |||||||||||| |||||||| |||||||| ||||||| ||||||| ||||||    
T  49184238 tatttcctccagtcctatttataaaaaataatttattttttaaattcatttaataattaatgtat 49184302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 43929482 - 43929431
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  43929482 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 45848953 - 45849004
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatcc 168  Q
    ||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    
T  45848953 tatttataagaaacaattaactttttatattcatttaataattgatgtatcc 45849004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 519971 - 519917
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||||||||||    
T  519971 atcctatttataagaaaattttaactttttagattcattgagtaattgatgtatc 519917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 44939200 - 44939150
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||| | |||| |||||||||||||||||| |||||||||||||    
T  44939200 tatttataagagaaaattgattttttagattcattgagtaattgatgtatc 44939150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 25021245 - 25021294
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| || | | |||||||||||||||||||||||||||||    
T  25021245 tatttataagaaacaaatgactttttagattcattgaataattgatgtat 25021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 25021366 - 25021313
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtatccg 169  Q
    ||||||| |||||| |||| | |||||||||| |||||||||||||||||||||    
T  25021366 ctatttacaagaaacaattgactttttagatttattgaataattgatgtatccg 25021313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 38040413 - 38040360
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | || | |||||||||||||||| |||||||||||||    
T  38040413 tcctatttataagaaaaatttgactttttagattcattgattaattgatgtatc 38040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 5368904 - 5368852
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatccg 169  Q
    |||||||||| || |||||| ||||||||| |||||||||||| |||||||||    
T  5368904 tatttataagcaaaaattaactttttagatgcattgaataattaatgtatccg 5368852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 6793608 - 6793656
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||| | ||||||||||| ||||||||||||||| |||||    
T  6793608 tatttataagaaaaagttaattttttaaattcattgaataattaatgta 6793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 23923406 - 23923458
Alignment:
Q  115 cctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||| | || | ||||||||||| ||||||||||||||||||    
T  23923406 cctatttataagaaaaatttgaatttttagattcgttgaataattgatgtatc 23923458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 50155435 - 50155383
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | || | |||||||||||||||| ||||||||||||    
T  50155435 tcctatttataagaaaaagttgactttttagattcattgagtaattgatgtat 50155383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 26823141 - 26823196
Alignment:
Q  107 catccaatcctatttataagaaataattaattttttagattcattgaataattgat 162  Q
    ||||| ||||||||||||| ||| |||||| |||||| ||| ||||||||||||||    
T  26823141 catccgatcctatttataataaaaaattaactttttaaatttattgaataattgat 26823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 34890315 - 34890264
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtatccg 169  Q
    |||||||||||| || || | ||||||||||||||||||||| |||||||||    
T  34890315 atttataagaaaaaaatactattttagattcattgaataattaatgtatccg 34890264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 47678392 - 47678341
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||| ||||||||| |||||||||||||    
T  47678392 tcctatttataagaaaaatttaacttttgagattcattcaataattgatgta 47678341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 47844545 - 47844596
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||| ||||||||| |||||||||||||    
T  47844545 tcctatttataagaaaaatttaacttttgagattcattcaataattgatgta 47844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 11386170 - 11386216
Alignment:
Q  119 tttataagaaataattaatttt-ttagattcattgaataattgatgt 164  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  11386170 tttataagaaaaaattgatttttttagattcattgaataattgatgt 11386216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 38590203 - 38590150
Alignment:
Q  116 ctatttataagaaataa--ttaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||| ||  |||| |||||||||||||||| |||||||||||||    
T  38590203 ctatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatc 38590150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 1811321 - 1811276
Alignment:
Q  121 tataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| || |||| |||||||||||||||| ||||||||||||||    
T  1811321 tataagcaaaaattcattttttagattcattaaataattgatgtat 1811276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 7375606 - 7375553
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| |||| | |||||||||||||||  ||||| |||||||    
T  7375606 tcctatttataagaaaaaattgactttttagattcattgtgtaattaatgtatc 7375553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 8971242 - 8971291
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| |||||| || ||||||||||||| ||||| ||||||    
T  8971242 tatttataagaaaaaattaagttgttagattcattgagtaattaatgtat 8971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 15285570 - 15285521
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||| | | || |||||||||||| ||||||||||||||||||    
T  15285570 tatttataagagacacttgattttttagattgattgaataattgatgtat 15285521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 24305802 - 24305749
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||| |||||| | ||||||||||| ||| ||||| |||||||||||||    
T  24305802 tcctatttagaagaaaaatttaattttttaaatttattgagtaattgatgtatc 24305749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 29892267 - 29892214
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||| |||| |||| | |||||||||||||| |||||||||| ||||    
T  29892267 tcctatttataggaaacaattgactttttagattcattcaataattgatatatc 29892214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 33018254 - 33018303
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||| | || |||||||| |||||||| ||||||||||||    
T  33018254 ctatttataagaaacatttgattttttaaattcattgcataattgatgta 33018303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 34662695 - 34662744
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||| ||| | |||| |||||||||||||| |||||||||||||    
T  34662695 ctatttataaaaaaaagttaactttttagattcattcaataattgatgta 34662744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 50105684 - 50105725
Alignment:
Q  131 aattaattttttagattcattgaataattgatgtatccgatc 172  Q
    ||||||||||||||||||||||||||||  ||||||| ||||    
T  50105684 aattaattttttagattcattgaataatcaatgtatctgatc 50105725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 26760184 - 26760236
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | || | ||||| |||||||||||||| ||||||||    
T  26760184 tcctatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26760236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 26924350 - 26924298
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | || | ||||| |||||||||||||| ||||||||    
T  26924350 tcctatttataagaaacatttgacttttttgattcattgaataaatgatgtat 26924298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 28359059 - 28359007
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| || | | |||||| ||||||||||||||| ||||||    
T  28359059 tcctatttataagaaaaaaatgaatttttaaattcattgaataattaatgtat 28359007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 35533569 - 35533609
Alignment:
Q  124 aagaaataattaattttttagattcattgaataattgatgt 164  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  35533569 aagaaattatttattttttagatttattgaataattgatgt 35533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 37515227 - 37515175
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | |||| |||||||||||||| | ||||| ||||||    
T  37515227 tcctatttataagaaaaatttaactttttagattcattaagtaattaatgtat 37515175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 47678267 - 47678319
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  47678267 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 47678319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 30191907 - 30191959
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  30191907 tcctatttataagaaaaaattgattttttagattcattgagtaattgatgtat 30191959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 3043803 - 3043854
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  3043803 tcctatttataagaaaaagttaattttttagattcattcaataattgatgta 3043854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 20745468 - 20745417
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  20745468 tcctatttataagaaaaagttaattttttagattcattcaataattgatgta 20745417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 24100776 - 24100823
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  24100776 ttataagaaataattaactttttagattcattgaataattaatgtatc 24100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 24100935 - 24100888
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  24100935 ttataagaaataattaactttttagattcattgaataattaatgtatc 24100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 43117989 - 43117939
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  43117989 ctatttataagaaaaaattgattttttacattcattgaataattgatgtat 43117939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 21554250 - 21554193
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||||| ||||||    
T  21554250 tccaatcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat 21554193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 26066382 - 26066435
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtatccg 169  Q
    ||||||||||||||||||| | |||  |||||||||||||||||||||||||||    
T  26066382 ctatttataagaaataattgactttcaagattcattgaataattgatgtatccg 26066435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 41116573 - 41116626
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  41116573 tcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatc 41116626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 55190803 - 55190750
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| |||| |||||||| ||||||| |||||||||||||||    
T  55190803 tcctatttataagaaaaaattgattttttatattcattcaataattgatgtatc 55190750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45828552 - 45828500
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  45828552 tcctatttataagaaaaaattgattttttagattcattgagtaattaatgtat 45828500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 53225781 - 53225729
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | |||||||||||||||||||||| ||||||    
T  53225781 tcctatttataagaaaaaattgactttttagattcattgaataattaatgtat 53225729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 2643619 - 2643670
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| |||||    
T  2643619 tcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 20459377 - 20459326
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  20459377 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 20459326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 27587377 - 27587330
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  27587377 ttataagaaataatttattttttaggttcattgaataattaatgtatc 27587330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 42804267 - 42804318
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  42804267 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 42804318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 43020767 - 43020818
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  43020767 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43020818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 47866047 - 47866098
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  47866047 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 47866098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 16412247 - 16412293
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgat 162  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||    
T  16412247 ctatttataagaaaaaattgactttttagattcattgaataattgat 16412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 42169180 - 42169128
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | || | |||||||||| ||||||||||||||||||    
T  42169180 tcctatttataagaaaaatttgactttttagatttattgaataattgatgtat 42169128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 48361063 - 48361115
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | || | |||||||||||||||| ||||||||||||    
T  48361063 tcctatttataagaaaaatttgactttttagattcattgagtaattgatgtat 48361115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 20956901 - 20956952
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||| |||   ||||||||||||||||||| |||||||||||||    
T  20956901 tcctatttataaaaaaatgttaattttttagattcattcaataattgatgta 20956952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 36196496 - 36196449
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||| |||| ||||||||||||||| |||||||| |||||||    
T  36196496 ttataagaaaaaattgattttttagattcatagaataattaatgtatc 36196449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 3043926 - 3043876
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||| ||||||||| |||| ||||||| ||||||||||||| |||||||||    
T  3043926 ctatatataagaaacaatttatttttttgattcattgaatagttgatgtat 3043876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 3345446 - 3345396
Alignment:
Q  122 ataagaaataattaattttttagattcattgaataattgatgtatccgatc 172  Q
    |||||| |||||| | ||||||| |||||||||||||||||||||| ||||    
T  3345446 ataagacataattcactttttaggttcattgaataattgatgtatctgatc 3345396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 29686531 - 29686485
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  29686531 ttataagaaacaattaattttttaaattcattgtataattaatgtat 29686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 32645621 - 32645575
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||| || || |||| ||||||||||||||||||||||||||||    
T  32645621 ttataagcaaaaaataatgttttagattcattgaataattgatgtat 32645575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 34226400 - 34226450
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||| ||| |||| | ||||| |||||||||||||||||||||||    
T  34226400 ctatttataataaacaatttacttttttgattcattgaataattgatgtat 34226450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 44111879 - 44111829
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||| | || | |||||||||||||||| |||||||||||||    
T  44111879 tatttataagaaaaagttgactttttagattcattgagtaattgatgtatc 44111829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 36132641 - 36132698
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||| |||||||||||||||||| || | ||||| ||||||||| |||| ||||||||    
T  36132641 tccagtcctatttataagaaatatttgacttttttgattcattgtataaatgatgtat 36132698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 48195901 - 48195954
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| || ||| |||||| ||||||||| ||||||| |||||    
T  48195901 tcctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatc 48195954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 55292250 - 55292197
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||| |||||| |||| ||||||||||| |||| ||||||| ||||||    
T  55292250 atcctatttacaagaaacaatttattttttagatacattaaataatttatgtat 55292197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 1140900 - 1140928
Alignment:
Q  138 tttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||||||||||||||||    
T  1140900 tttttagattcattgaataattgatgtat 1140928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 4698760 - 4698708
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| || ||| |||| ||||||||||| |||||||||||| ||||||    
T  4698760 tcctatttacaataaacaattgattttttagatacattgaataatttatgtat 4698708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 8347656 - 8347708
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | || | |||||||||||||||| | ||||||||||    
T  8347656 tcctatttataagaaaaatttgactttttagattcattgagtgattgatgtat 8347708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 8826827 - 8826779
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgat 162  Q
    |||||||| || |||| |||| | |||||||||||||||||||||||||    
T  8826827 tcctatttgtatgaaaaaatttactttttagattcattgaataattgat 8826779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 20459252 - 20459304
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  20459252 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 20459304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 27841842 - 27841893
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||| ||| | ||||||||||||||||||| ||||||| |||||    
T  27841842 atcctatttataaaaaa-agttaattttttagattcattcaataattaatgta 27841893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 37991497 - 37991549
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| | |||| ||||| ||||||||| |||| ||||||||    
T  37991497 tcctatttataagaaacatttaaattttttgattcattgtataaatgatgtat 37991549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 39993171 - 39993123
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| || || ||| |||||||||||||||||||||| ||||||    
T  39993171 atttataagtaaaaaataactttttagattcattgaataattaatgtat 39993123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 43020892 - 43020840
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  43020892 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 43020840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 47866172 - 47866120
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  47866172 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 47866120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 48373428 - 48373480
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||| |||||| |||| |||||| || |||||||||||||| |||||    
T  48373428 atcctatttacaagaaacaattgatttttgaggttcattgaataatttatgta 48373480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 31903094 - 31903035
Alignment:
Q  107 catccaatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||  |||||| |||||||||||||||||| |||||||||||||| ||||||    
T  31903094 catccaatccttattataaaaaataattaattttttaggttcattgaataattaatgtat 31903035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 8566218 - 8566165
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | || |||||||||||||||||| |||||||||||||    
T  8566218 tcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatc 8566165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 36245513 - 36245460
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| |||| | |||||||||||||||| |||||||||||||    
T  36245513 tcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatc 36245460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 41850610 - 41850659
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  41850610 tatttataagaaaaagttaattttttagattcattgaataattaatgtat 41850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 4826768 - 4826824
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||| |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  4826768 tccagtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 4826824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 32811842 - 32811798
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgat 162  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||    
T  32811842 atttataagaaaaaattaattttttagattcattgagtaattgat 32811798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 27231970 - 27231919
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | |||| |||||||||||||| |||||||||||||    
T  27231970 tcctatttataagaaaaagttaactttttagattcattcaataattgatgta 27231919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 32811514 - 32811463
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||||||| | ||||||||||||||||||| | |||||||||||    
T  32811514 tcctatttataagaaaaagttaattttttagattcattcagtaattgatgta 32811463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 28677455 - 28677401
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||| |||| | |||||||||| ||||| |||||||||||||    
T  28677455 atcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatc 28677401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 31227507 - 31227556
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| | ||||||||||||||||||| |||| |||||||||    
T  31227507 tatttataagaaaaagttaattttttagattcattcaatagttgatgtat 31227556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 32811388 - 32811441
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||| ||||||||| |||| | ||||| |||||||||||||||||||||||    
T  32811388 atcctatatataagaaacaatttacttttttgattcattgaataattgatgtat 32811441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 28020012 - 28020064
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  28020012 tcctatttataagaaacaatttacttttttgattcattgaatagttgatgtat 28020064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 45123376 - 45123329
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||| ||||| ||||||||| |||| |||||||||    
T  45123376 ttataagaaataattaacttttttgattcattgtataagtgatgtatc 45123329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 31227631 - 31227577
Alignment:
Q  112 aatcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  31227631 aatcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 31227577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 10007713 - 10007660
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | || | ||||||||||||||| |||||| |||||||    
T  10007713 tcctatttataagaaaaagttgactttttagattcattgtataattaatgtatc 10007660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 11668152 - 11668099
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||||| | || | |||||| ||||||||| |||||||||||||    
T  11668152 tcctatttataagaaaaatttgactttttacattcattgattaattgatgtatc 11668099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 16861530 - 16861575
Alignment:
Q  121 tataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||| ||| |||| | |||||||||||||||||||||||||||||    
T  16861530 tataaaaaacaattgactttttagattcattgaataattgatgtat 16861575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 30869323 - 30869270
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||   || | |||||||||||||||| |||||||||||||    
T  30869323 tcctatttataagaaaattttgactttttagattcattgagtaattgatgtatc 30869270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 40142910 - 40142857
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||| ||||||||| |||| |||||||||||| |||| |||||| |||||||    
T  40142910 tcctatgtataagaaaaaattgattttttagatttattgtataattaatgtatc 40142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 1366606 - 1366658
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  1366606 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 1366658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 1366728 - 1366680
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||| ||||| | |||| |||||||||||||| |||||||||||||    
T  1366728 tatttatcagaaaaagttaactttttagattcattcaataattgatgta 1366680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 2610202 - 2610250
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||| | || |||||||| ||||||||| ||||||||||||    
T  2610202 atttataagaaaaatttgattttttaaattcattgagtaattgatgtat 2610250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 4826898 - 4826846
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | ||||| ||||||||||||| |||||||||    
T  4826898 tcctatatataagaaacaatttacttttttgattcattgaatagttgatgtat 4826846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 29365758 - 29365706
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| ||||||||| |||| | |||||||||||||||| ||||| ||||||    
T  29365758 tcctatatataagaaaaaattgactttttagattcattgagtaattaatgtat 29365706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 40362005 - 40362033
Alignment:
Q  138 tttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||||||||||||||||    
T  40362005 tttttagattcattgaataattgatgtat 40362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 45441568 - 45441520
Alignment:
Q  119 tttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||| ||| |||||| |||||||||||| |||||||||| ||||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatc 45441520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 7649813 - 7649862
Alignment:
Q  117 tatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  7649813 tatttataataaataattatctttttagattcattgaataattgatgtat 7649862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 2810090 - 2810141
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||||||||||| ||| | ||||||||||||||||||| |||||||||||||    
T  2810090 tcctatttataaaaaaaagttaattttttagattcattcaataattgatgta 2810141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 1837095 - 1837045
Alignment:
Q  115 cctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||||| | ||||||||||||||| ||| |||||||||||||    
T  1837095 cctatttataagaaaaagttaattttttagatttattcaataattgatgta 1837045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 1158382 - 1158330
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| ||||||||||| | |||||| || |||||||||||||||||||    
T  1158382 tcctatttacaagaaataattgactttttaaatacattgaataattgatgtat 1158330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 10283431 - 10283379
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||| || ||||||||||||| ||| ||||| ||||||||||||    
T  10283431 tcctatttataagcaaaaattaattttttaaatttattgagtaattgatgtat 10283379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 12450366 - 12450414
Alignment:
Q  118 atttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||  |||| ||||| |||||||||||||||||||||||    
T  12450366 atttataagaaatgtttaactttttggattcattgaataattgatgtat 12450414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 33128849 - 33128889
Alignment:
Q  127 aaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  33128849 aaataattaattttttagattcatttaataattaatgtatc 33128889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 3064896 - 3064947
Alignment:
Q  116 ctatttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    |||||||||||||| |||||  ||||||||||||||| |||||| |||||||    
T  3064896 ctatttataagaaaaaattatctttttagattcattgtataattaatgtatc 3064947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 9343137 - 9343184
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtatc 167  Q
    ||||||||||||||| | ||||||||||||| |||||||| |||||||    
T  9343137 ttataagaaataattgactttttagattcatagaataattaatgtatc 9343184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 766564 - 766512
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||| |||| |||||| ||||||||||| |||| ||||||| ||||||    
T  766564 tcctatttacaagagataatttattttttagatacattaaataatttatgtat 766512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 2810215 - 2810163
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||| |||||||||||||| | |||||  |||||||||||| |||||||||    
T  2810215 tcctatatataagaaataatttacttttttcattcattgaatagttgatgtat 2810163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 2937090 - 2937134
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataa 157  Q
    ||||||||||||||||| | |||| ||||||||||||||| ||||    
T  2937090 atcctatttataagaaacatttaactttttagattcattgcataa 2937134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 7649935 - 7649888
Alignment:
Q  117 tatttataagaaataattaatttttt--agattcattgaataattgat 162  Q
    ||||| ||||||||||||||||||||  | ||||||||||||||||||    
T  7649935 tatttctaagaaataattaattttttttaaattcattgaataattgat 7649888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 8646816 - 8646764
Alignment:
Q  113 atcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    ||||||||||||||||| | |||  |||||||||| ||| |||||||||||||    
T  8646816 atcctatttataagaaaaagttatctttttagatttatttaataattgatgta 8646764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 28630890 - 28630838
Alignment:
Q  114 tcctatttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    |||||||||||||||| |||| | ||||||||||||||| |||| | ||||||    
T  28630890 tcctatttataagaaacaattgactttttagattcattgcataaattatgtat 28630838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 16513 - 16569
Alignment:
Q  109 tccaatcctatttataagaaataattaattttttagattcattgaataattgatgta 165  Q
    |||| ||||||||| |||||| | ||||||||||||||||||| |||||||||||||    
T  16513 tccagtcctatttacaagaaaaagttaattttttagattcattcaataattgatgta 16569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 5545 - 5499
Alignment:
Q  120 ttataagaaataattaattttttagattcattgaataattgatgtat 166  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||    
T  5545 ttataagaaataattgactttttagattcattgaataattaatgtat 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 423361 - 423333
Alignment:
Q  138 tttttagattcattgaataattgatgtat 166  Q
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T  423361 tttttagattcattgaataattgatgtat 423333  T

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