View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16930_low_12 (Length: 316)

Name: NF16930_low_12
Description: NF16930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16930_low_12
NF16930_low_12
[»] chr1 (48 HSPs)
chr1 (122-312)||(40122001-40122192)
chr1 (122-308)||(13137780-13137968)
chr1 (122-312)||(50166980-50167171)
chr1 (122-312)||(833970-834163)
chr1 (122-312)||(45644158-45644350)
chr1 (122-312)||(28265359-28265550)
chr1 (122-312)||(196710-196903)
chr1 (122-315)||(23555071-23555265)
chr1 (139-312)||(50169032-50169206)
chr1 (122-312)||(3846921-3847117)
chr1 (121-312)||(1833685-1833877)
chr1 (122-314)||(41361085-41361278)
chr1 (122-292)||(8550584-8550756)
chr1 (122-308)||(10925402-10925590)
chr1 (122-288)||(28223221-28223389)
chr1 (122-315)||(16455790-16455984)
chr1 (120-315)||(927783-927975)
chr1 (122-288)||(28220026-28220194)
chr1 (122-291)||(4552448-4552619)
chr1 (123-312)||(30476247-30476442)
chr1 (158-312)||(3157037-3157195)
chr1 (122-288)||(37559664-37559834)
chr1 (122-312)||(49918522-49918718)
chr1 (122-287)||(31659439-31659606)
chr1 (122-312)||(46065090-46065278)
chr1 (124-312)||(13659153-13659332)
chr1 (124-312)||(15820479-15820659)
chr1 (126-312)||(3189503-3189708)
chr1 (126-312)||(3198320-3198525)
chr1 (126-312)||(3207159-3207364)
chr1 (122-312)||(37503362-37503553)
chr1 (122-312)||(44455332-44455528)
chr1 (162-291)||(8870570-8870698)
chr1 (122-312)||(20762845-20763037)
chr1 (138-315)||(5460076-5460251)
chr1 (121-287)||(13316150-13316318)
chr1 (122-312)||(37282498-37282687)
chr1 (122-287)||(51765601-51765766)
chr1 (122-308)||(3460872-3461060)
chr1 (140-312)||(44646634-44646800)
chr1 (140-312)||(44649992-44650158)
chr1 (162-212)||(36683885-36683935)
chr1 (122-203)||(1050331-1050413)
chr1 (162-315)||(2262824-2262972)
chr1 (230-309)||(16914089-16914168)
chr1 (272-314)||(36683850-36683892)
chr1 (280-312)||(14569087-14569119)
chr1 (158-190)||(20622071-20622103)
[»] chr2 (46 HSPs)
chr2 (122-312)||(723547-723740)
chr2 (122-312)||(34139573-34139766)
chr2 (122-312)||(33162254-33162446)
chr2 (122-311)||(39285012-39285202)
chr2 (158-312)||(11067477-11067630)
chr2 (122-312)||(14633628-14633821)
chr2 (122-312)||(42362520-42362713)
chr2 (122-312)||(24885761-24885953)
chr2 (122-312)||(36773734-36773926)
chr2 (121-312)||(11151394-11151587)
chr2 (122-312)||(36987875-36988071)
chr2 (122-312)||(14202224-14202417)
chr2 (122-315)||(11049723-11049912)
chr2 (121-312)||(2334217-2334413)
chr2 (122-302)||(2838132-2838313)
chr2 (122-288)||(17057169-17057337)
chr2 (122-288)||(17085152-17085320)
chr2 (122-312)||(36317813-36318005)
chr2 (130-288)||(38312440-38312600)
chr2 (122-312)||(6594804-6595001)
chr2 (122-287)||(29868070-29868237)
chr2 (122-312)||(11690673-11690856)
chr2 (141-312)||(45099927-45100103)
chr2 (122-315)||(12123393-12123584)
chr2 (140-312)||(5723074-5723251)
chr2 (122-312)||(36205464-36205660)
chr2 (124-308)||(13121942-13122124)
chr2 (227-315)||(1345636-1345724)
chr2 (141-287)||(4484147-4484294)
chr2 (163-309)||(26353358-26353495)
chr2 (141-312)||(4502952-4503128)
chr2 (121-287)||(32289770-32289938)
chr2 (121-306)||(17489957-17490138)
chr2 (141-287)||(30833550-30833697)
chr2 (232-315)||(7815190-7815273)
chr2 (162-253)||(36191103-36191192)
chr2 (267-309)||(41446315-41446357)
chr2 (122-225)||(1346413-1346518)
chr2 (265-314)||(28672102-28672151)
chr2 (267-315)||(42019821-42019868)
chr2 (144-202)||(4561356-4561415)
chr2 (265-312)||(7596960-7597007)
chr2 (121-195)||(41446426-41446501)
chr2 (122-215)||(41455184-41455278)
chr2 (144-192)||(7815109-7815157)
chr2 (122-170)||(26354127-26354176)
[»] chr5 (37 HSPs)
chr5 (122-314)||(8565748-8565945)
chr5 (124-312)||(538197-538387)
chr5 (122-312)||(5887235-5887430)
chr5 (122-312)||(28750455-28750651)
chr5 (144-288)||(42428253-42428398)
chr5 (122-288)||(42426035-42426203)
chr5 (122-312)||(31183143-31183341)
chr5 (123-312)||(13239924-13240118)
chr5 (122-313)||(16649635-16649827)
chr5 (120-312)||(33831852-33832048)
chr5 (122-315)||(42927060-42927260)
chr5 (122-312)||(30682722-30682919)
chr5 (122-312)||(533941-534127)
chr5 (124-312)||(32636996-32637190)
chr5 (122-283)||(13488406-13488569)
chr5 (158-312)||(37439314-37439470)
chr5 (118-288)||(39468344-39468517)
chr5 (122-288)||(19806563-19806729)
chr5 (151-315)||(16452249-16452411)
chr5 (122-312)||(25412933-25413129)
chr5 (158-287)||(13343262-13343390)
chr5 (122-312)||(30182761-30182957)
chr5 (140-312)||(36073861-36074038)
chr5 (122-287)||(26178088-26178255)
chr5 (122-287)||(16409681-16409846)
chr5 (122-315)||(13695495-13695689)
chr5 (174-285)||(9049209-9049317)
chr5 (122-315)||(30897582-30897770)
chr5 (122-199)||(3075549-3075629)
chr5 (138-287)||(26170968-26171118)
chr5 (122-190)||(9789021-9789092)
chr5 (125-228)||(42309827-42309932)
chr5 (121-190)||(18441440-18441512)
chr5 (280-315)||(30793305-30793340)
chr5 (121-218)||(12102534-12102638)
chr5 (271-314)||(9299754-9299797)
chr5 (122-174)||(40147555-40147610)
[»] chr4 (46 HSPs)
chr4 (122-312)||(46147195-46147387)
chr4 (125-312)||(47038219-47038407)
chr4 (122-312)||(48893443-48893634)
chr4 (122-307)||(36463196-36463382)
chr4 (122-312)||(45686987-45687178)
chr4 (122-312)||(5871992-5872183)
chr4 (124-312)||(52467159-52467350)
chr4 (122-312)||(26175436-26175632)
chr4 (124-312)||(56178438-56178632)
chr4 (122-312)||(34570214-34570410)
chr4 (122-314)||(31474321-31474512)
chr4 (122-312)||(9927258-9927454)
chr4 (122-312)||(52082463-52082659)
chr4 (122-287)||(12743728-12743892)
chr4 (121-315)||(6541986-6542178)
chr4 (182-312)||(36994695-36994824)
chr4 (122-312)||(48143216-48143417)
chr4 (122-287)||(5369881-5370049)
chr4 (122-312)||(12739353-12739546)
chr4 (122-312)||(29254666-29254861)
chr4 (124-315)||(37229531-37229720)
chr4 (122-312)||(52095162-52095358)
chr4 (122-311)||(4588132-4588320)
chr4 (121-312)||(54199707-54199903)
chr4 (121-288)||(37740825-37740995)
chr4 (138-309)||(5207667-5207833)
chr4 (122-315)||(24969834-24970030)
chr4 (178-288)||(5429879-5429989)
chr4 (143-315)||(29056528-29056703)
chr4 (143-312)||(13992112-13992288)
chr4 (141-312)||(48142206-48142372)
chr4 (122-312)||(5350081-5350268)
chr4 (122-200)||(29999628-29999709)
chr4 (124-229)||(5280598-5280703)
chr4 (138-315)||(37754789-37754958)
chr4 (185-288)||(3913777-3913876)
chr4 (166-221)||(51338337-51338392)
chr4 (229-312)||(29999719-29999805)
chr4 (165-304)||(44967677-44967815)
chr4 (231-316)||(39593647-39593732)
chr4 (242-311)||(51337237-51337306)
chr4 (161-227)||(16420843-16420909)
chr4 (265-315)||(21703784-21703834)
chr4 (229-287)||(31495214-31495271)
chr4 (158-190)||(31495142-31495174)
chr4 (121-175)||(21703692-21703746)
[»] chr7 (45 HSPs)
chr7 (120-312)||(41317236-41317430)
chr7 (122-312)||(36146212-36146404)
chr7 (122-312)||(41648814-41649007)
chr7 (122-312)||(8153514-8153705)
chr7 (122-312)||(47675936-47676132)
chr7 (122-312)||(38671025-38671218)
chr7 (122-288)||(14069633-14069801)
chr7 (122-288)||(14379661-14379829)
chr7 (122-312)||(24525306-24525498)
chr7 (120-315)||(31105198-31105392)
chr7 (122-312)||(1113829-1114021)
chr7 (123-288)||(48489631-48489798)
chr7 (119-312)||(495785-495979)
chr7 (121-312)||(19502351-19502548)
chr7 (119-312)||(25616026-25616226)
chr7 (122-312)||(27347989-27348185)
chr7 (122-288)||(18126846-18127015)
chr7 (122-308)||(48491754-48491944)
chr7 (122-315)||(23344142-23344332)
chr7 (122-315)||(26417485-26417685)
chr7 (122-312)||(47673744-47673940)
chr7 (122-287)||(23555242-23555410)
chr7 (125-315)||(23564874-23565061)
chr7 (126-311)||(43864417-43864609)
chr7 (122-288)||(4586361-4586530)
chr7 (122-278)||(30024562-30024714)
chr7 (121-288)||(31732767-31732937)
chr7 (144-315)||(36574347-36574515)
chr7 (122-312)||(29991226-29991422)
chr7 (122-315)||(31519072-31519258)
chr7 (138-314)||(35854086-35854268)
chr7 (144-315)||(4253359-4253527)
chr7 (141-312)||(4178946-4179122)
chr7 (238-312)||(12097789-12097863)
chr7 (161-312)||(40808760-40808909)
chr7 (125-240)||(12096969-12097084)
chr7 (141-315)||(48408975-48409156)
chr7 (141-314)||(25766776-25766956)
chr7 (124-315)||(3904275-3904466)
chr7 (121-202)||(30843285-30843367)
chr7 (172-287)||(39731573-39731687)
chr7 (226-287)||(43504057-43504117)
chr7 (266-316)||(26639494-26639544)
chr7 (122-174)||(6430441-6430496)
chr7 (230-306)||(18396488-18396563)
[»] chr8 (42 HSPs)
chr8 (122-308)||(40321256-40321442)
chr8 (122-312)||(1345176-1345367)
chr8 (122-308)||(5689447-5689635)
chr8 (124-312)||(41366420-41366611)
chr8 (122-312)||(30143512-30143708)
chr8 (122-312)||(6599144-6599333)
chr8 (122-312)||(6674597-6674786)
chr8 (122-314)||(19491503-19491696)
chr8 (122-288)||(12702431-12702602)
chr8 (118-315)||(10015248-10015447)
chr8 (122-303)||(18105876-18106058)
chr8 (162-315)||(1292311-1292463)
chr8 (126-312)||(3303474-3303666)
chr8 (122-312)||(43036595-43036791)
chr8 (122-312)||(4731830-4732026)
chr8 (122-312)||(4743027-4743210)
chr8 (122-312)||(15212958-15213155)
chr8 (139-312)||(42498367-42498546)
chr8 (122-287)||(33352351-33352518)
chr8 (122-312)||(44304028-44304224)
chr8 (122-304)||(8153967-8154147)
chr8 (196-312)||(18141990-18142105)
chr8 (121-312)||(4733878-4734076)
chr8 (158-288)||(27811478-27811608)
chr8 (122-312)||(17982826-17983021)
chr8 (128-309)||(3073686-3073867)
chr8 (140-312)||(34254149-34254326)
chr8 (122-312)||(1746018-1746214)
chr8 (122-283)||(3050925-3051090)
chr8 (140-312)||(34256325-34256502)
chr8 (121-310)||(8965491-8965685)
chr8 (122-312)||(19945158-19945354)
chr8 (122-308)||(32901989-32902175)
chr8 (117-312)||(29796126-29796316)
chr8 (141-312)||(31218430-31218606)
chr8 (121-292)||(11711804-11711972)
chr8 (227-312)||(30291780-30291865)
chr8 (122-261)||(4162692-4162832)
chr8 (120-287)||(2627941-2628110)
chr8 (122-192)||(7493284-7493352)
chr8 (188-302)||(7597798-7597909)
chr8 (122-291)||(3231646-3231821)
[»] chr3 (44 HSPs)
chr3 (122-312)||(29196189-29196382)
chr3 (122-312)||(9666270-9666462)
chr3 (122-309)||(44700284-44700472)
chr3 (122-312)||(31314617-31314808)
chr3 (122-312)||(22834807-22834999)
chr3 (122-315)||(27305519-27305709)
chr3 (121-315)||(21350810-21351002)
chr3 (122-312)||(761019-761211)
chr3 (122-315)||(32891273-32891458)
chr3 (122-312)||(23391712-23391905)
chr3 (122-315)||(51351941-51352132)
chr3 (122-304)||(39153164-39153348)
chr3 (119-315)||(2074880-2075074)
chr3 (122-288)||(40735582-40735750)
chr3 (122-312)||(29811040-29811237)
chr3 (122-308)||(29813239-29813430)
chr3 (122-288)||(40734697-40734865)
chr3 (122-312)||(23410131-23410325)
chr3 (158-287)||(7762467-7762596)
chr3 (122-312)||(19683687-19683884)
chr3 (122-312)||(5236257-5236453)
chr3 (122-312)||(51398986-51399182)
chr3 (122-288)||(9581483-9581652)
chr3 (122-312)||(7764637-7764834)
chr3 (140-312)||(29682531-29682706)
chr3 (121-312)||(37408631-37408828)
chr3 (122-314)||(9635923-9636122)
chr3 (133-312)||(16499201-16499371)
chr3 (122-312)||(5257943-5258139)
chr3 (119-263)||(9634618-9634764)
chr3 (158-312)||(5260161-5260318)
chr3 (226-315)||(53921413-53921502)
chr3 (17-115)||(30224855-30224954)
chr3 (121-287)||(45095365-45095531)
chr3 (122-287)||(23199938-23200102)
chr3 (158-312)||(32744295-32744432)
chr3 (122-196)||(37406981-37407057)
chr3 (122-287)||(23197745-23197903)
chr3 (48-115)||(30231833-30231900)
chr3 (161-316)||(2020328-2020480)
chr3 (123-203)||(53921333-53921413)
chr3 (144-190)||(801388-801436)
chr3 (141-246)||(1312882-1312986)
chr3 (233-312)||(33192003-33192081)
[»] chr6 (25 HSPs)
chr6 (122-315)||(14521478-14521676)
chr6 (124-312)||(3038729-3038919)
chr6 (122-312)||(16569194-16569389)
chr6 (122-304)||(26954091-26954274)
chr6 (122-288)||(28137211-28137378)
chr6 (140-312)||(33160169-33160347)
chr6 (158-288)||(9182869-9182999)
chr6 (138-312)||(5408886-5409065)
chr6 (138-312)||(5413211-5413390)
chr6 (190-312)||(33211060-33211181)
chr6 (122-281)||(16452127-16452288)
chr6 (140-312)||(31404493-31404670)
chr6 (121-312)||(30834332-30834531)
chr6 (144-312)||(5406025-5406195)
chr6 (144-312)||(5410350-5410520)
chr6 (124-315)||(4045587-4045773)
chr6 (122-261)||(2171326-2171468)
chr6 (122-184)||(257245-257308)
chr6 (144-200)||(3072579-3072637)
chr6 (158-190)||(412387-412419)
chr6 (158-193)||(9182828-9182863)
chr6 (159-200)||(6097286-6097327)
chr6 (230-315)||(12221018-12221103)
chr6 (122-174)||(602903-602958)
chr6 (140-192)||(30683713-30683765)
[»] scaffold1668 (1 HSPs)
scaffold1668 (122-312)||(1301-1494)
[»] scaffold0006 (1 HSPs)
scaffold0006 (124-312)||(148914-149093)
[»] scaffold0066 (1 HSPs)
scaffold0066 (122-312)||(20216-20411)
[»] scaffold0016 (1 HSPs)
scaffold0016 (139-287)||(114804-114955)
[»] scaffold0219 (1 HSPs)
scaffold0219 (122-308)||(27250-27433)
[»] scaffold0002 (1 HSPs)
scaffold0002 (122-312)||(434706-434903)
[»] scaffold1519 (1 HSPs)
scaffold1519 (122-280)||(1125-1285)
[»] scaffold0491 (2 HSPs)
scaffold0491 (122-287)||(8534-8699)
scaffold0491 (122-287)||(10960-11125)
[»] scaffold0286 (1 HSPs)
scaffold0286 (122-200)||(11854-11935)
[»] scaffold0053 (1 HSPs)
scaffold0053 (230-314)||(25213-25295)


Alignment Details
Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 40122001 - 40122192
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40122001 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgcgtggagcaaaggaaagtagtaaccaatatctaagtgaacacaagcaacaacaat 40122100  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40122101 aataacaa-cacctagatctaatttagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 40122192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 122 - 308
Target Start/End: Original strand, 13137780 - 13137968
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||| |||||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13137780 tgttgtaaattcggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaa 13137879  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacaca 308  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  13137880 taataac-aacacctagatctaatctagtaatcaaagtgaaaacctcaaaaccacaagcaaaagataaagagagaagagaaacaaacaca 13137968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 50166980 - 50167171
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||| ||| | ||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50166980 tgttgtgaactcgaactcaaaatcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagaaacaacaat 50167079  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50167080 aataacaa-cacctagatctaatctagtaatcaaagtgaaaagttcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 50167171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 833970 - 834163
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  833970 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacaac 834069  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  834070 aataac-aacaccaagatctaatctgggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 834163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 45644158 - 45644350
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaa 218  Q
    ||||||||||||||| |||||||||||| ||||  || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  45644158 tgttgtgaattcggactcaaaatcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaa 45644257  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  45644258 taataacaa-catctagatctaatctagcaatcaaagtgaaaagctcaaaaccacaaacaaaagataaagagagaagagaaacaagcacaccaa 45644350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 28265359 - 28265550
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||| ||||||||| |||||||||||||||||  || |||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  28265359 tgttgggaattcggactcaaaatcacaccaatacaaactatgatgtgtggagtaaaggaaaatagtagccaatatcaaagtgaacacaagcaacaacaat 28265458  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  28265459 aataacaa-catctagatctaatctagtaatcaaagtaaaaagctcaaaaccacaaccaaaagataaagagagaagagaaacaaacacaccaa 28265550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 196710 - 196903
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||| | ||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  196710 tgttgtgaattcgtactcaaattcacaccaatacaaattatgatgtgtggagcaaaggaaaatagtaaccaatatcaaagtgaacacaagcaacaacaat 196809  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  196810 aataac-aacacctacatctaatctagtaatcaaagtgagaagctcaaaaccacaagcaaaagataaagagagaagagagaaaaaaacacaccaa 196903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 23555071 - 23555265
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||| ||||||||  ||  |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||     
T  23555071 tgttgtgaattcggactcaaaatcgcaccaatagaaacaatgatgtgtggagcaaagaaaagtagtaatcaatgtcaaagtaaacacaagcaacaacaac 23555170  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  23555171 aataacaa-cacctagatctaatttaggaatcatagtgaaaagctcaaaaccacaagcaaaacataaagagagaagagaaacaaacgcaccaagaa 23555265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 139 - 312
Target Start/End: Original strand, 50169032 - 50169206
Alignment:
Q  139 caaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctaga 236  Q
    ||||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| |    
T  50169032 caaaatcacaccaatacaaactatgatgtgtgaagcaaatgaaagtagtaaccaatatcaaagtgaacacaaacaacaacaataataacaa-cacctata 50169130  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50169131 tctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 50169206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 3846921 - 3847117
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| ||||||||| || ||||  || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  3846921 tgttgtgaattcggactcaaaatcatactaatacaaactatgatgtgtggagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaat 3847020  T
Q  220 aataacaa--acacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    ||||| ||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  3847021 aataataacaacacctagatctaatatagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 3847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 121 - 312
Target Start/End: Complemental strand, 1833877 - 1833685
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||||||||||||| |||| ||||||||||||  || |||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  1833877 ctgttgtgaattcggactcaatatcacaccaatacaaactatgatctgtggagtaaaggaaagtcgtaaccaatttcaaagtaaacacaagcaacaacaa 1833778  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| | | |||||||||||||||    
T  1833777 taataacaa-cacctagatctaatctagtaatcaaagtgaaaagcacaaaactacaagcaaaagataaagagagaaaataaacaaacacaccaa 1833685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 122 - 314
Target Start/End: Complemental strand, 41361278 - 41361085
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||| ||  |||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||     
T  41361278 tgttgtgaattcggactcaaaactctaaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaatatcaaagtaaacacaagtaacaacaac 41361179  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  41361178 aataacaa-cacctatatctaatctaggaatcaaagtaaaaagctcaaaaccacaaacaaaagataaagtgagaaaagaaacaaacacaccaaga 41361085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 122 - 292
Target Start/End: Original strand, 8550584 - 8550756
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||    
T  8550584 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaa 8550683  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag 292  Q
     |||||| ||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||||||||    
T  8550684 caataac-aacacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcacaagataaagagag 8550756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 10925590 - 10925402
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| ||||||||||| |||||  || |||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| || |||    
T  10925590 tgttgtgaattcggactcaaaatcacaacaatacaaactatgttgtgtggagcaaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatcaa 10925491  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacaca 308  Q
     |||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  10925490 caataacaa-cacctagatctaatctagtaatcaaagggaaaaactcaaaaccacaagcaaaagataaagagagaagataaacaaacaca 10925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 28223221 - 28223389
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| ||| |||||||  || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  28223221 tgttgtgaattcggactcaaaactcagaccaatacaaactatgatgtgtggagcaaacgaaagtagtaaccaatatcaaagtgaacacaagcaacaacaa 28223320  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||    
T  28223321 taataac-aacacctagatctaatctagtaatcaaagtgaaaaacacaaaatcacaagcaaaagataaag 28223389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 16455984 - 16455790
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| ||||||| ||||||||  |||  | ||| |||| |||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  16455984 tgttgtgaattcggactcaaaattacaccaatgaaaacaaagatttgtgtagcaaatgaaagtagtaaccaatatcaaagtaaacgtaagcaacaacaat 16455885  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||| ||  |||||||||||| | |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  16455884 aataacaa-catatagatctaatctggtaatcaaagtgaaaaactcaaaaccacaagtaaaagataaagagagaagagaaacaaatacaccaagaa 16455790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 120 - 315
Target Start/End: Original strand, 927783 - 927975
Alignment:
Q  120 tctgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||| |||| ||||||||||||||||||| ||||| |||||||||     
T  927783 tctgttgtgaattcggactcaaaatcacatcaataaactatgatgtgtggagtaaagggaagtggtaaccaatatcaaagtaatcacaaacaacaacaac 927882  T
Q  220 aataacaaacacctagatctaatctagg-aatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||   |||| || |||||||||| |||  ||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  927883 aa---caaa-acttagatctaatatagataatcaaagtgaaaagttcaaaaccacaaacaaaagataaagagagaagagaaacaaacacacaaagaa 927975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 28220026 - 28220194
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||| ||||| ||| ||||||||||||| ||||| ||||||| |||||||||    
T  28220026 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggaacaaagaaaattagtaaccaatattaaagtgaacacaaacaacaacaa 28220125  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28220126 taataacaa-cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaag 28220194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 291
Target Start/End: Original strand, 4552448 - 4552619
Alignment:
Q  122 tgttgtgaattcggattcaaaat-cacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||| ||||||||| ||||| | ||||||||||  || ||||||| ||| || |||||||||||||||||||| |||||||||||||||| ||||||||    
T  4552448 tgttgcgaattcggactcaaatttcacaccaatacaaactatgatgcgtgaagtaaaggaaagtagtaaccaatttcaaagtaaacacaagtaacaacaa 4552547  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagaga 291  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4552548 taataacaa-cacatagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagaga 4552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 123 - 312
Target Start/End: Original strand, 30476247 - 30476442
Alignment:
Q  123 gttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||||||| | |||||| |||||||||||  || ||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  30476247 gttgtgaattcgaactcaaaactcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaat 30476346  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    |||||| ||||| |||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||  ||||| |||||  ||||||||||||||    
T  30476347 aataac-aacacttagacctaatctaataatcaaagtgaaaagctcaaaaccacaagtaaaagataaaaggagagaagagaggaacaaacacaccaa 30476442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 3157195 - 3157037
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||||  ||||||||||||||||||||||||||||    
T  3157195 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacag-cacctagatctaatctaggaatcaaagt 3157097  T
Q  257 gaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  3157096 gaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 3157037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 37559664 - 37559834
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||||| |||||| |||||||||||  || |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||    
T  37559664 tgttgtgaattcggactcaaaactcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 37559763  T
Q  218 ataataacaaacacctagatct-aatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    | |||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37559764 acaataac-agcacctagatctaaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaag 37559834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 49918718 - 49918522
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||| ||||| || |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||    
T  49918718 tgttgtaaattcagactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaa 49918619  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||| | |||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  49918618 caataac-agcacctatatctaatctaggaatcaaaatgaaaagcacaaatccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 49918522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 31659606 - 31659439
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||||||| |||| ||||||||||||||||||||| | ||||||||||| || |||    
T  31659606 tgttgtgaattcggactcaaaatcacaccaatataaaatatgatgtgtggagaaaagaaaagtagtaaccaatatcaaaatgaacacaagcaataatcaa 31659507  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     |||||||| ||||| |||||||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  31659506 caataacaa-caccttgatctaatctaggaatcaaagtaaaaagcacaaaaccataagcaaaagataaa 31659439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 46065278 - 46065090
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||| ||||| |||  |||  | ||||||||||||||| || ||| ||||||||| |||||||||| |||||||||||||||    
T  46065278 tgttgtgaattcggactcaaaaccacac-aatgaaaacaaagatgtgtggagcaaacgatagttgtaaccaat-tcaaagtaaatacaagcaacaacaat 46065181  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||| |||||||||||||||||  ||| || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46065180 aataacaa-cacctagatctaatctactaat-aatgtgaaaggctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 46065090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 13659153 - 13659332
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataa 221  Q
    ||||||||||||| ||||||||||| |||||  || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||         
T  13659153 ttgtgaattcggactcaaaatcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagtaaacacaagcaataac----- 13659247  T
Q  222 taacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
         |||||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  13659248 -----aacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaagagagaagagaaacaaatacaccaa 13659332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 124 - 312
Target Start/End: Complemental strand, 15820659 - 15820479
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataata 223  Q
    ||||||||||||| |||||| | |||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||         
T  15820659 ttgtgaattcggactcaaaa-ctcaccaataaacttagatgtgtggagcaaaggaaagtagtaactaatatcaaagtaaacacaagcaacaacaa----- 15820566  T
Q  224 acaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
       |||||||||||||||| |||||||||||  |||||||||| || |||||||||  ||||| ||||| |||||||||||||||||||    
T  15820565 --caacacctagatctaatataggaatcaaatagaaaagctcataaacacaagcaatggataaggagagaagagaaacaaacacaccaa 15820479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 312
Target Start/End: Complemental strand, 3189708 - 3189503
Alignment:
Q  126 gtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataata 223  Q
    |||||||||||  ||||||||||||||||  || |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3189708 gtgaattcggacacaaaatcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagtgaacacaagcaacaacaataata 3189609  T
Q  224 aca-------------aacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaaca 306  Q
    | |             |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    |||||  |||||||||||||    
T  3189608 aaacaacaataataataacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaaca 3189509  T
Q  307 caccaa 312  Q
    ||||||    
T  3189508 caccaa 3189503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 312
Target Start/End: Complemental strand, 3198525 - 3198320
Alignment:
Q  126 gtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataata 223  Q
    |||||||||||  ||||||||||||||||  || |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3198525 gtgaattcggacacaaaatcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagtgaacacaagcaacaacaataata 3198426  T
Q  224 aca-------------aacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaaca 306  Q
    | |             |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    |||||  |||||||||||||    
T  3198425 aaacaacaataataataacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaaca 3198326  T
Q  307 caccaa 312  Q
    ||||||    
T  3198325 caccaa 3198320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 312
Target Start/End: Complemental strand, 3207364 - 3207159
Alignment:
Q  126 gtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataata 223  Q
    |||||||||||  ||||||||||||||||  || |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3207364 gtgaattcggacacaaaatcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatttcaaagtgaacacaagcaacaacaataata 3207265  T
Q  224 aca-------------aacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaaca 306  Q
    | |             |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    |||||  |||||||||||||    
T  3207264 aaacaacaataataataacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaaca 3207165  T
Q  307 caccaa 312  Q
    ||||||    
T  3207164 caccaa 3207159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 37503362 - 37503553
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||||||| ||||||||||||     ||||||||||| ||||||||||| || |||    
T  37503362 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagtaaaggaaagtag-----aatatcaaagtgaacacaagcaataatcaa 37503456  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||| ||| |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||  ||||| |||||  ||||||||||||||    
T  37503457 caatatcaa-cacctagatctaatctaggaattaaagtgaaaagcacaaaaccgcaagcaaaagataaagggagagaagagaggaacaaacacaccaa 37503553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 44455528 - 44455332
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||| | |||||||||||||||||  || |||||| ||||||| |||| ||||| ||||||||||||||||| ||||||| ||| || |||    
T  44455528 tgttgtgaattcgtactcaaaatcacaccaatacaaactatgatatgtggagaaaagaaaagtggtaaccaatatcaaagtgaacacaaacaataatcaa 44455429  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag--agagtagaga--aacaaacacaccaa 312  Q
     |||||||  ||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||  |||| |||||  ||||||||||||||    
T  44455428 caataacag-cacctagatctaatctaggaatcaaagtgaaaaacacaaaaccaaaagcaaaagataaaggaagagaagagaggaacaaacacaccaa 44455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 8870570 - 8870698
Alignment:
Q  162 atgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaa 261  Q
    ||||||||| ||||||||||||||||| | ||||||||||| ||||||||| |||||||| || ||| ||||||||| ||||||||||||||||||||||    
T  8870570 atgtgtggaacaaaggaaagtagtaactagtatcaaagtaatcacaagcaaaaacaataaaaaaaaa-acctagatcaaatctaggaatcaaagtgaaaa 8870668  T
Q  262 gctcaaaaccacaagcaaaagataaagaga 291  Q
       |||||||||||||||||||||||||||    
T  8870669 atacaaaaccacaagcaaaagataaagaga 8870698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 20763037 - 20762845
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | |||||||||||||||||  || |||||||||||||||||||||||||| |||||||||||||||| ||  ||||||| || ||    
T  20763037 tgttgtgaattccggtctcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtattaaccaatatcaaagtgaattcaagcaataatca 20762938  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | |||||||||||||||||||     ||||||||||| ||||||||||||||||||||||    |||||  |||||||||||||||||||    
T  20762937 acaataac-agcacctagatctaatctagg-----aagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 20762845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 315
Target Start/End: Complemental strand, 5460251 - 5460076
Alignment:
Q  138 tcaaaatcacaccaataaattatgatgtgtggagcaaa-ggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctaga 236  Q
    ||||||||||| ||||||| |  ||||||| ||| ||| || || ||||||||||||||||| ||| | ||| ||||||||| || |||||||  |||||    
T  5460251 tcaaaatcacaacaataaacttagatgtgtagagtaaaagggaaatagtaaccaatatcaaaataatctcaaacaacaacaacaagaacaaac--ctaga 5460154  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    || |||||||||| |||| || ||||| |||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  5460153 tcgaatctaggaa-caaaatgtaaagcacaaaaccacaagcaaaagataaagagagaatagaaacaaacacaacaagaa 5460076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 13316150 - 13316318
Alignment:
Q  121 ctgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-c 216  Q
    ||||||||||||| | | |||||||||||||||||  || ||| |||||||||||||||||||||||||| ||||| |||||| ||  ||||||| || |    
T  13316150 ctgttgtgaattccggtctcaaaatcacaccaatacgaaatataatgtgtggagcaaaggaaagtagtaatcaataacaaagtgaatgcaagcaataatc 13316249  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    || |||||||  ||||||||||||||||||||||||||||||||| | | ||||||||||||||| |||||    
T  13316250 aacaataacag-cacctagatctaatctaggaatcaaagtgaaaaacac-aaaccacaagcaaaatataaa 13316318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 37282498 - 37282687
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagc-aaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||||||| ||||||||||||||||||| |   ||||||||||| |||| |||||| |||  ||||| ||||||| |||||| | |||||| |    
T  37282498 tgttgtgaattcggactcaaaatcacaccaataaacttaaatgtgtggagcaaaagaaaagtaataattaatatgaaagtaaccacaagtaccaacaaca 37282597  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaag-caaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||  ||||||||||||||||| |||| | ||||||| | ||||||||||||  |||||| ||| |||| |||||||||||| ||||||    
T  37282598 ataacaa--acctagatctaatctagaaatc-aggtgaaaaacgcaaaaccacaagaaaaaagagaaatagagaagagaaacaaacgcaccaa 37282687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 51765766 - 51765601
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| | | ||||| ||||||||||  || ||||||||||||||||||||||||||||||||| ||   |||| |   ||||||| || |||    
T  51765766 tgttgtgaattccg-tacaaaaccacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaattaagtgagtgcaagcaataatcaa 51765668  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     |||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||    
T  51765667 caataacaa-cacctagatctaatctaggaaacaaagtgaaaagcac-aaaccacaagcacaagataaa 51765601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 3461060 - 3460872
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaa----gtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    |||| ||||||| || ||||||| ||||| |||||||  |||| |||||||||||||||     ||||||| ||||||||||| |   ||||||||||||    
T  3461060 tgttttgaattcagactcaaaattacacccataaatttagatgcgtggagcaaaggaaaatatatagtaactaatatcaaagtgacttcaagcaacaaca 3460961  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtg-aaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacaca 308  Q
    | |||| |||  ||||||||||| |||||||||| | ||| ||||   ||||||||||| |||||||||||||||| |||||||||||||||    
T  3460960 acaatatcaa--acctagatctagtctaggaatc-atgtgaaaaaaaacaaaaccacaaacaaaagataaagagagaagagaaacaaacaca 3460872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 44646634 - 44646800
Alignment:
Q  140 aaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatct 239  Q
    |||||||  |||||||| |  |||||||| ||||||||||||||||||||||||| || | || | ||||||||| ||| ||||||||  ||||| ||||    
T  44646634 aaaatcattccaataaacttagatgtgtgtagcaaaggaaagtagtaaccaatattaatgaaacctcaagcaacaccaaaaataacaa--acctaaatct 44646731  T
Q  240 aatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||  ||| ||| |||||||||||| ||||| |||||||||||||||||||    |||||||||||| ||||||    
T  44646732 aacatagaaat-aaagtgaaaagcacaaaatcacaagcaaaagataaaga---aagagaaacaaacgcaccaa 44646800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 44649992 - 44650158
Alignment:
Q  140 aaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatct 239  Q
    |||||||  |||||||| |  |||||||| ||||||| ||||||||||||||||| || | || | ||||||||| ||| ||||||||  ||||| ||||    
T  44649992 aaaatcattccaataaacttagatgtgtgtagcaaagaaaagtagtaaccaatattaatgaaacctcaagcaacaccaaaaataacaa--acctaaatct 44650089  T
Q  240 aatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||  ||| ||| |||||||||||| ||||| |||||||||||||||||||    |||||||||||| ||||||    
T  44650090 aacatagaaat-aaagtgaaaagcacaaaatcacaagcaaaagataaaga---aagagaaacaaacgcaccaa 44650158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 36683935 - 36683885
Alignment:
Q  162 atgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaa 212  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  36683935 atgtgtggagcaaaggaaagtggtaaccaatatcaaagtaaaaacaagcaa 36683885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 1050331 - 1050413
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaa-ggaaagtagtaaccaatatcaaagtaaa 203  Q
    ||||||||||| | | ||||||||||||||||||| || ||||| || || ||| ||||||||||||||||||||||| ||||    
T  1050331 tgttgtgaatttgaactcaaaatcacaccaataaactaagatgtatgaagtaaaaggaaagtagtaaccaatatcaaaataaa 1050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 315
Target Start/End: Original strand, 2262824 - 2262972
Alignment:
Q  162 atgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaa 261  Q
    |||||||||| |||||||  ||| || ||||||||||||||  | ||||| |||||| ||||||  | ||| | ||||||| |||||||| |||||||||    
T  2262824 atgtgtggagtaaaggaac-tagcaatcaatatcaaagtaacaataagcagcaacaacaataac--atacccaaatctaatttaggaatc-aagtgaaaa 2262919  T
Q  262 gctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
     | |||| |||||| |||||| ||||||||| ||| ||||||||| ||||||||    
T  2262920 acccaaatccacaaacaaaag-taaagagagaagaaaaacaaacataccaagaa 2262972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 309
Target Start/End: Original strand, 16914089 - 16914168
Alignment:
Q  230 acctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacac 309  Q
    ||||||||||||  |||||| |||   | ||||| ||||||| |||||||||||||||||||| ||||| ||||||||||    
T  16914089 acctagatctaacttaggaaccaagtgggaaagcacaaaaccgcaagcaaaagataaagagagaagagacacaaacacac 16914168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 36683892 - 36683850
Alignment:
Q  272 acaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  36683892 acaagcaaaagataaagagagaagacaaacaaacacaccaaga 36683850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 14569087 - 14569119
Alignment:
Q  280 aagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||||||||||||||||||||||||||    
T  14569087 aagataaagagagtagagaaacaaacacaccaa 14569119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 20622071 - 20622103
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaacca 190  Q
    |||||||||||||||||||||||||||||||||    
T  20622071 tatgatgtgtggagcaaaggaaagtagtaacca 20622103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 6e-74; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 723547 - 723740
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  723547 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaatcaacaacaat 723646  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  723647 aataacaa-cacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 723740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 34139573 - 34139766
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34139573 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaat 34139672  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  34139673 aataac-aagacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 34139766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 33162254 - 33162446
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaa 218  Q
    ||||||||||||||| ||||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  33162254 tgttgtgaattcggactcaaaatcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaa 33162353  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  33162354 taataacaa-cacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaatagagaagagaaacaaacacaccaa 33162446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 122 - 311
Target Start/End: Complemental strand, 39285202 - 39285012
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata-aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| | |||| ||| ||||||| || ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  39285202 tgttgtgaattcggacttaaaactcataccaatacaactatgatgtgtggagcaaagaaaagtagtaaccaatttcaaagtaaacacaagcaacaacaat 39285103  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacacca 311  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39285102 aataacaa-cacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacacca 39285012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 11067630 - 11067477
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtg 257  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  11067630 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaa-cacctagatctaatctagtaatcaaagtg 11067532  T
Q  258 aaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11067531 aaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 11067477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 14633628 - 14633821
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||| ||| || |||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14633628 tgttgtgatttcagactcaaaatcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaat 14633727  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  14633728 aataac-aacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaatcaaaagataaagagagaatagagaaacaaacacaccaa 14633821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 42362713 - 42362520
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  42362713 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaactcaagcaacaacaat 42362614  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  42362613 aataacaa-cacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 42362520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 24885953 - 24885761
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  24885953 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaaccaatatcaaagtgaacacaagaaacaacaat 24885854  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaac-aaacacaccaa 312  Q
     ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  24885853 gataacaa-cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagaagagaaacaaaacacaccaa 24885761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 36773926 - 36773734
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacac-aagcaacaacaa 218  Q
    |||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||  ||||  ||||||||||||    
T  36773926 tgttgtgaattcggattcaaaatcacaccaatacaaactatgatgtgtggagcaaatgaaagtagtaaccaatatcaaagccaacaagaagcaacaacaa 36773827  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  36773826 taataacaa-cacctagatctaatctagtaataaaaaagaaaagctcaaaaccacaagcaaaagataaagaaagaagagaaacaaacacaccaa 36773734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 121 - 312
Target Start/End: Original strand, 11151394 - 11151587
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    |||||||||||||| | |||||| ||| |||||||  || ||||||||||||||||||  |||||||||| |||||||||||| ||||||||||||||||    
T  11151394 ctgttgtgaattcgaactcaaaactcataccaatacaaactatgatgtgtggagcaaataaaagtagtaatcaatatcaaagtgaacacaagcaacaaca 11151493  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  11151494 ataataacaa-cagctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaaacaaaagataaagagagaagagaaacaaacacaccaa 11151587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 36987875 - 36988071
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||    
T  36987875 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaataatcaa 36987974  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
     |||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    |||||  |||||||||||||||||||    
T  36987975 caataacaa-cacctagatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 36988071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 14202224 - 14202417
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| ||||||||| ||||| |  || |||||| ||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  14202224 tgttgtgaattcggagtcaaaatcataccaacacaaactatgatatgtggagtaaaggaaagtagtaatcaatatcaaagtgaacgcaagcaacaacaat 14202323  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagag--aaacaaacacaccaa 312  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  14202324 aataacaa-cacctagatctaatctagtaatcaaagtgaaaagcttaaaaccacaagcaaaagataaagagagaagagataaacaaacacaccaa 14202417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 11049912 - 11049723
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    |||||||| ||||||  ||||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  11049912 tgttgtgagttcggacgcaaaatcacaccaataaaactatgatgcgtggagcaaaagaaagtagtaaccaatatcaaagtaatcataagcaacaacaata 11049813  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||     |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  11049812 ataa-----acctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaatataaagagagaagagaaacaaacacacaaagaa 11049723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 121 - 312
Target Start/End: Original strand, 2334217 - 2334413
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||| || |||||||||||||||||  || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2334217 ctgttgtgaattcagactcaaaatcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaa 2334316  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||| | ||||||||||||||  ||||||||||||||| |||||||    |||||  |||||||||||||||||||    
T  2334317 taataac-aacacctagatctaatctggtaatcaaagtgaaaacttcaaaaccacaagcacaagataaagggagagaagagagaaacaaacacaccaa 2334413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 122 - 302
Target Start/End: Complemental strand, 2838313 - 2838132
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataa-attatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||| ||||||  ||||| |||||||||||| | | |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||     
T  2838313 tgttgtgagttcggacacaaaactcacaccaataatactttgatgtgtggagtaaaggaaagtagtaaccactatcaaagtaaacacaaacaacaacaac 2838214  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaaca 302  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  2838213 aataacaa-cacctagatataatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagtgagaagagaaaca 2838132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 17057169 - 17057337
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||    
T  17057169 tgttgtgaattcggactcaaaatcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaa 17057268  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
     |||||||  |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  17057269 caataacag-cacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaag 17057337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 17085152 - 17085320
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||    
T  17085152 tgttgtgaattcggactcaaaatcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaa 17085251  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
     |||||||  |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  17085252 caataacag-cacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaag 17085320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 36317813 - 36318005
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||| ||| |||||| |||||||||||  ||  ||||||||| || |||| |||||||||||||||| ||||||||||||||||||||| |||    
T  36317813 tgttgtgaatttggactcaaaactcacaccaatacaaacaatgatgtgtagaacaaatgaaagtagtaaccaatttcaaagtaaacacaagcaacagcaa 36317912  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||||||    
T  36317913 taataacaa-cacctagatttaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagaaagaagataaacaaacacaccaa 36318005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 130 - 288
Target Start/End: Complemental strand, 38312600 - 38312440
Alignment:
Q  130 attcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataaca 226  Q
    ||||||| |||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  38312600 attcggactcaaaatcacaccaatataaacaatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaatcaacaataaca 38312501  T
Q  227 aacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
      ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38312500 g-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaag 38312440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 6594804 - 6595001
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||| ||| |||||||||||||||||  || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| || || |||    
T  6594804 tgttgtgaatttggactcaaaatcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatcaaagtgaacacaagtaataatcaa 6594903  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa-----agagagtagagaaacaaacacaccaa 312  Q
     |||||||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||     |||||  |||||||||||||||||||    
T  6594904 caataacag-cacctagatctaatctagaaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaagggagagaagagagaaacaaacacaccaa 6595001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 29868237 - 29868070
Alignment:
Q  122 tgttgtgaattcggattcaaaat-cacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| ||||| | |||| |||||  || ||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||    
T  29868237 tgttgtgaattcggactcaaatttcacagcaatacaaactatgatgtgtggagcaaagaaaagtagtaatcaattttaaagtaaacacaagcaacaacaa 29868138  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  29868137 taataac-aacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcacaagataaa 29868070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 11690856 - 11690673
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||    
T  11690856 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatatcaa-gtgaacacaagcaataacaa 11690758  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaac-aaacacaccaa 312  Q
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  11690757 ----------cacctagatctaatctaggaattaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaaacacaccaa 11690673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 141 - 312
Target Start/End: Complemental strand, 45100103 - 45099927
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||| | |||||||||    
T  45100103 aaatcacaccaatacgaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataac-agcacctagat 45100005  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    |||||||||||||||||||||||||| | ||| ||||||||||| ||||    |||||  |||||||||||||||||||    
T  45100004 ctaatctaggaatcaaagtgaaaagcac-aaatcacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 45099927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 12123393 - 12123584
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||| ||| |||||| | ||||| |||||||   ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |    
T  12123393 tgttgtgaatttggactcaaaaattacacctataaatttatatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaacctcaaacaacaacaaca 12123492  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||  ||||| ||||||||||| |||| |||||||||   ||||| |||||||||||||||||||||  |||||||||||||| |||||||    
T  12123493 ataacaa--acctatatctaatctagaaatc-aagtgaaaaatacaaaatcacaagcaaaagataaagagataagagaaacaaacacgccaagaa 12123584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 5723074 - 5723251
Alignment:
Q  140 aaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctaga 236  Q
    |||||||||||||||  || ||||||||||||||||||| ||||||||||||||||||||||| | ||||| ||| || ||| |||||| ||||||||||    
T  5723074 aaaatcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatcaaagtgagcacaaacaataatcaacaataac-aacacctaga 5723172  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||  ||||||| | ||||||||||||||||||||    ||||| ||||||||||||||||||||    
T  5723173 tctaatctaggaatcaaaaagaaaagcac-aaaccacaagcaaaagataaaaggagagaatagagaaacaaacacaccaa 5723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 36205464 - 36205660
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | |||||||||||| ||||  || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| || ||    
T  36205464 tgttgtgaattccggtctcaaaatcacactaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaacacaagcaataatca 36205563  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | |||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||    |||||  |||||||||||||||||||    
T  36205564 acaataac-agcacctagatctaatctaggaatcaaagtgaaaagc-agaaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 36205660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 124 - 308
Target Start/End: Complemental strand, 13122124 - 13121942
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataat 222  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||| |||| |||||| ||| |||||||||| |||   ||||||  ||||| |||    
T  13122124 ttgtgaattcggacacaaaatcacaccaataaaactatgatgtgtggagtaaagaaaagtactaatcaatatcaaaataacatcaagcagtaacaacaat 13122025  T
Q  223 aacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacaca 308  Q
    |||||||  |||||| |||||||| |||||| ||||||| |  ||||||||||||||||||||||||||| |||||||||||||||    
T  13122024 aacaaac--ctagatgtaatctagaaatcaa-gtgaaaaacataaaaccacaagcaaaagataaagagagaagagaaacaaacaca 13121942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 1345724 - 1345636
Alignment:
Q  227 aacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||    
T  1345724 aacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaatcataagataaagtgagaagagaaacaaacacaccaagaa 1345636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 4484147 - 4484294
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||| |   ||||||| || ||| |||||| |||||||||||    
T  4484147 aaatcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataac-aacacctagat 4484245  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||||||||    
T  4484246 ctaatctaggaaacaaagtgaaaagc-aaaaaccacaagcacaagataaa 4484294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 163 - 309
Target Start/End: Complemental strand, 26353495 - 26353358
Alignment:
Q  163 tgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaag 262  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||   |||| || ||||||||||     ||||||||||||||     
T  26353495 tgtgtagagcaaaggaaagtagtaaccaatattaaagtaatcacaaggaacaacaataa---caaa-acttagatctaat-----aatcaaagtgaaaaa 26353405  T
Q  263 ctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacac 309  Q
    | |||||||||||||||||||||| ||||| ||||||||||||||||    
T  26353404 cacaaaaccacaagcaaaagataaggagaggagagaaacaaacacac 26353358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 141 - 312
Target Start/End: Original strand, 4502952 - 4503128
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  || ||| |||||||||| ||||||||||||||||||||| |||||| ||  ||||||| || ||| |||||||  |||||||||    
T  4502952 aaatcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacag-cacctagat 4503050  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    |||||||||||| ||||||||||||| ||||| |||||||| |||||||    |||||  |||||||||||||||||||    
T  4503051 ctaatctaggaaacaaagtgaaaagcacaaaa-cacaagcacaagataaaaggagagaagagagaaacaaacacaccaa 4503128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 287
Target Start/End: Complemental strand, 32289938 - 32289770
Alignment:
Q  121 ctgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-c 216  Q
    ||||||||||||| ||| |||||| ||||||||||  || || |||||||||||||||||||||||||||||| || ||||||     ||||||| || |    
T  32289938 ctgttgtgaattccgatctcaaaaccacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagtgggtgcaagcaataatc 32289839  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    || |||||| ||||||||||||||||||||||| |||||||||||||  |||| |||||||| ||||||||    
T  32289838 aacaataac-aacacctagatctaatctaggaaacaaagtgaaaagcataaaa-cacaagcacaagataaa 32289770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 306
Target Start/End: Original strand, 17489957 - 17490138
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaataaat-tatgatgtg--tggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    |||||||||||||||| |||||||  ||||||||||  |||||||||  ||||||||  |||| ||||||||||||||||||||| ||||   |||||||    
T  17489957 ctgttgtgaattcggactcaaaattgcaccaataaaactatgatgtgtgtggagcaagagaaaatagtaaccaatatcaaagtaaccaca---aacaaca 17490053  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaa--agctcaaaaccacaagcaaaagataaagagagtagagaaacaaaca 306  Q
    |||||||     |||||||| |||| |||| ||  ||||||||  | |||||||||||||||||| ||||||||||| |||||||||||||    
T  17490054 ataataa-----acctagatttaatttagggat-taagtgaaaacaactcaaaaccacaagcaaatgataaagagagaagagaaacaaaca 17490138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 30833697 - 30833550
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||||||| ||   | || |   ||||||| || ||| |||||||| |||||||||    
T  30833697 aaatcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccattaattatgtgagtgcaagcaataatcaacaataacaa-cacctagat 30833599  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    |||||||||||| ||||||||||||| | |||||||||||| ||||||||    
T  30833598 ctaatctaggaaacaaagtgaaaagcac-aaaccacaagcacaagataaa 30833550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 315
Target Start/End: Original strand, 7815190 - 7815273
Alignment:
Q  232 ctagatctaatctaggaatcaaagtgaaaag-ctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||||||||||||||||| |||||||  | ||||| | ||||||||||||||||| || ||||||||||||||||||||||    
T  7815190 ctagatctaatctaggaatcaa-gtgaaaaaacacaaaatcgcaagcaaaagataaagaaagaagagaaacaaacacaccaagaa 7815273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 36191103 - 36191192
Alignment:
Q  162 atgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaa 253  Q
    ||||||||||||||| |||  ||||||||||||||||  || | |||||||||| || ||||||||  ||||||||||||||||||||||||    
T  36191103 atgtgtggagcaaagaaaatcagtaaccaatatcaaatcaacctcaagcaacaataacaataacaa--acctagatctaatctaggaatcaa 36191192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 41446357 - 41446315
Alignment:
Q  267 aaaccacaagcaaaagataaagagagtagagaaacaaacacac 309  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  41446357 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 41446315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 1346518 - 1346413
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat-aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||| |||||||| |||||||| || ||| ||| |||| | ||||||||||| |||||||| |||||||||||||  |||||| |||||||| || |||     
T  1346518 tgttctgaattcgaattcaaaactcgcactaatgaaataaagatgtgtggagtaaaggaaaatagtaaccaatatttaagtaatcacaagcagcagcaac 1346419  T
Q  220 aataac 225  Q
    ||||||    
T  1346418 aataac 1346413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 28672151 - 28672102
Alignment:
Q  265 caaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||| ||||    
T  28672151 caaaatcacaagcaaaggataaagagagaagagaaacaaacacacaaaga 28672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 42019821 - 42019868
Alignment:
Q  267 aaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  42019821 aaaccacaggcaaaa-ataaagagagaagagaaacaaacacaccaagaa 42019868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 4561415 - 4561356
Alignment:
Q  144 tcacaccaataaattatgatgtgtggagcaaaggaaa-gtagtaaccaatatcaaagtaa 202  Q
    ||||||||||||| |  |||||||||| |||| |||| ||||||||||||||||||||||    
T  4561415 tcacaccaataaacttagatgtgtggaacaaaagaaaagtagtaaccaatatcaaagtaa 4561356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 7596960 - 7597007
Alignment:
Q  265 caaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||| || ||||||||||||||||||| ||||||| |||||||||||    
T  7596960 caaaaacaaaagcaaaagataaagagagaagagaaataaacacaccaa 7597007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 41446501 - 41446426
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatc 195  Q
    ||||||||||||| || |||||| ||||| ||||||| |   |||||||||||||| |||||||||||||| ||||    
T  41446501 ctgttgtgaattcagactcaaaactcacaacaataaacttaaatgtgtggagcaaaagaaagtagtaaccagtatc 41446426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 41455278 - 41455184
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa 215  Q
    |||||||||||| || |||||| ||||| ||||||| |  ||  ||||||||||| | ||||||||||| |||||||||||  | ||||||||||    
T  41455278 tgttgtgaattcagactcaaaactcacaacaataaacttagacatgtggagcaaaaggaagtagtaaccgatatcaaagtagcctcaagcaacaa 41455184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 7815109 - 7815157
Alignment:
Q  144 tcacaccaataaa-ttatgatgtgtggagcaaaggaaagtagtaaccaat 192  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  7815109 tcacaccaataaacttat-atgtgtagagcaaaggaaagtagtaaccaat 7815157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 26354176 - 26354127
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaat-aaattatgatgtgtgga 170  Q
    |||| |||||||||| |||||||||||||||| ||| |||||||||||||    
T  26354176 tgttatgaattcggactcaaaatcacaccaataaaactatgatgtgtgga 26354127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 6e-71; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 122 - 314
Target Start/End: Original strand, 8565748 - 8565945
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||| |||||||||||||||| ||||  || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  8565748 tgttgtgaatttggattcaaaatcacactaatataaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaacacaagcaacaacaat 8565847  T
Q  220 aataacaa--acacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagag-aaacaaacacaccaaga 314  Q
    ||||| ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  8565848 aataataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaaacaaacacaccaaga 8565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 124 - 312
Target Start/End: Complemental strand, 538387 - 538197
Alignment:
Q  124 ttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    |||||||||| || |||||| |||||||||||  || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  538387 ttgtgaattcagactcaaaactcacaccaatataaactatgatgtgtggagcaaaggaaagtaataaccaatttcaaagtaaacacaagcaacaacaata 538288  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  538287 ataacaa-catctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaagaaacacaccaa 538197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 5887235 - 5887430
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5887235 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatatgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaat 5887334  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccac--aagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||| |||||||| ||||||||||| ||||||| |||||| || ||||||||  |||||||||||||||||||   |||||||||||||||||||    
T  5887335 aataac-aacacctaaatctaatctagtaatcaaaatgaaaaacttaaaaccacaaaagcaaaagataaagagagaagagagaaacaaacacaccaa 5887430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 28750455 - 28750651
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||| ||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  28750455 tgttgtgaatttggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaattttaaagtaaacacaagcaacaacaa 28750554  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||  ||||| |||||  ||||||||||||||    
T  28750555 taataac-aacacctagatctaatctagtaatccaagtgaaaagcacaaaaccacaagcaaaatataaagggagagaagagaggaacaaacacaccaa 28750651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 288
Target Start/End: Original strand, 42428253 - 42428398
Alignment:
Q  144 tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaa 241  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  42428253 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaataataataac-aacacctagatctaa 42428351  T
Q  242 tctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  42428352 tctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 42428398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 42426035 - 42426203
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||| | |||||| |||||| ||||  || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||    
T  42426035 tgttgtgaattcgaactcaaaactcacacaaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatatcaaagtgaacacaagcaacatcaa 42426134  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42426135 taataac-aacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 42426203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 31183341 - 31183143
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  ||  |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| |||    
T  31183341 tgttgtgaattcggactcaaaatcacaccaatacaaaccatgatgtgtggagcaaaggaaagtagtaactaatatcaaagggaacacaagcaacaaaaat 31183242  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaag-----caaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||     ||||||||||||||||   |||||||||||||||||||    
T  31183241 aataac-aacacctatatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaattcaaaagataaagagagaagagagaaacaaacacaccaa 31183143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 123 - 312
Target Start/End: Complemental strand, 13240118 - 13239924
Alignment:
Q  123 gttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    |||||||||||| | |||||||||||| ||||  || |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |    
T  13240118 gttgtgaattcgaactcaaaatcacactaatacaaactatgatgtgtggagtaaaggaaagtagtaaccaattttaaagtaaacacaagcaacaacaaca 13240019  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    |||||  |||||||||||||||||||    
T  13240018 ataac-aacacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 13239924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 313
Target Start/End: Original strand, 16649635 - 16649827
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||| | ||||||||| |||||||  || |||||||||||||||||||||||||||||||||  |||||||| |||||||| |  | ||||    
T  16649635 tgttgtgaattcgaactcaaaatcataccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccacaatcaaagtgaacacaagtagtagcaat 16649734  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaag 313  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||  ||  ||||||||||||||||||||    
T  16649735 aataacaa-cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaacggaaaagagaaacaaacacaccaag 16649827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 120 - 312
Target Start/End: Complemental strand, 33832048 - 33831852
Alignment:
Q  120 tctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    ||||||||||||||||| ||||||| |||| ||||  || |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  33832048 tctgttgtgaattcggactcaaaattacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaacacaagcaataaca 33831949  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtg-aaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    | |||| | | |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||   ||||||||||| |||||||    
T  33831948 acaatagc-agcacctaaatctaatctaggaatcaaagtgaaaaagctcaaagccacaagcaaaagataaagagagaagagagaaacaaaaacaccaa 33831852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 42927260 - 42927060
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||| | ||||||||| |||||   |||  | |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||     
T  42927260 tgttgtgaattcgaactcaaaatcataccaacgaaaacaaagatgtgtggagcaaaggaaagtagcaactaatatcaaagtaaacacaagcaacaacaac 42927161  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccac------aagcaaaagataaagagagtagagaaacaaacacaccaag 313  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||      ||||||||||||| ||||  ||||||||||||||||||||    
T  42927160 aataac-aacacctagatctaatctaggaatcaaagtgaaaaactcaaaaccacaagcaaaagcaaaagataaggagataagagaaacaaacacaccaag 42927062  T
Q  314 aa 315  Q
    ||    
T  42927061 aa 42927060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 30682722 - 30682919
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||| |||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||    
T  30682722 tgttgtgaatacggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 30682821  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    | |||||| ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||  ||||| |||||  ||||||||||||||    
T  30682822 acaataac-aacacctagatctaatctaggaatcaaagtgaaaagcacaaattcacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 30682919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 534127 - 533941
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||    
T  534127 tgttgtgaattcggactcaaaactcacaccaatagaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtagacacaagcaacaataa 534028  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||| |||||      ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||||| |||| |||||||    
T  534027 taataac-aacac------ctaatctagtaatcaaagtgaaaatctcaaaaccacaagcaaaagataaaaagagaagagaagcaaagacaccaa 533941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 124 - 312
Target Start/End: Complemental strand, 32637190 - 32636996
Alignment:
Q  124 ttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    |||||||||||||||||||| |||||||||||  || |||||||||||||| |||||||||||||||| ||| ||| | ||||||||||||||| |||||    
T  32637190 ttgtgaattcggattcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaacaaatttcacactaaacacaagcaacatcaata 32637091  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag----tagagaaacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||| |||     |||||||||||||||||||    
T  32637090 ataacaa-cacctagatctaatctagtaatcaaagtgaaaaactcaaaatcacaagcacaagataaagggagggaagagagaaacaaacacaccaa 32636996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 13488569 - 13488406
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||  |||||||||||  || |||||||||||||| ||||||||||| |||||||| ||||||| ||||||| ||| | |||    
T  13488569 tgttgtgaattcggactcaaatctcacaccaatacaaaatatgatgtgtggagtaaaggaaagtaataaccaatttcaaagtgaacacaatcaatagcaa 13488470  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaaga 283  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  13488469 taataacaa-cacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaaga 13488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 37439470 - 37439314
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtg 257  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||    
T  37439470 tatgatgtgtggagcaaaagaa-gtagtaaccaatttcaaagtaaacacaagcaacaacaataataac-aacacctaggtctaatctagtaatcaaaatg 37439373  T
Q  258 aaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    |||||| |||||||||||||| |||||||    |||||  |||||||||||||||||||    
T  37439372 aaaagcacaaaaccacaagcataagataaagggagagaagagagaaacaaacacaccaa 37439314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 118 - 288
Target Start/End: Original strand, 39468344 - 39468517
Alignment:
Q  118 attctgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaaca 214  Q
    ||||||||||||||||| | |||||| | |||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  39468344 attctgttgtgaattcgaactcaaaacttacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaata 39468443  T
Q  215 a-caataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    | ||| |||||| | |||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||    
T  39468444 atcaacaataac-agcacctagatctaatctagaaatcaaagtgaaaagcacaaaaccacgagcacaagataaag 39468517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 19806729 - 19806563
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||| | ||||||||  || |||||||||||| |||||||||||||||||||||| | ||||| |||| | |||| | ||||    
T  19806729 tgttgtgaattcggactcaaaa-ctcaccaatacaaactatgatgtgtggggcaaaggaaagtagtaaccaattttaaagtgaacataggcaatagcaat 19806631  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  19806630 aataacaa-cacctaaatctaatctagtaatcaaagtgaaaagctaaaaaccacaagcaaaagataaag 19806563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 151 - 315
Target Start/End: Complemental strand, 16452411 - 16452249
Alignment:
Q  151 aataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaat 250  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||| || ||||||||||||||||||||||| ||||      ||||||||||||||||||    
T  16452411 aataaatta-gatgtgtggagtaaaggaaaatagtaaccaatattaacgtaaacacaagcaacaacaataacaacagt----tagatctaatctaggaat 16452317  T
Q  251 caaagtgaaaagctcaaaaccacaagc-aaaagataaag--agagtagagaaacaaacacaccaagaa 315  Q
    |||| |||||||||||||||||||||| |||| ||||||  |||| ||| ||||||||||||||||||    
T  16452316 caaattgaaaagctcaaaaccacaagcaaaaaaataaaggaagagaagataaacaaacacaccaagaa 16452249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 25413129 - 25412933
Alignment:
Q  122 tgttgtgaattc-ggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| || ||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||||| |||| | ||||||||| || ||    
T  25413129 tgttgtgaattccggtttcaaaatcacaccaatacgaactatgatgtgtggagcaaaggaaattagtaatcaatatccaagtgagcacaagcaataatca 25413030  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | |||||| |||||||||||||||||||| ||||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  25413029 acaataac-agcacctatatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 25412933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 13343390 - 13343262
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagt 256  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||  ||||||| || ||| |||||| ||||||||||||||||||||||||||||||    
T  13343390 tatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataac-aacacctagatctaatctaggaatcaaagt 13343292  T
Q  257 gaaaagctcaaaaccacaagcaaaagataaa 287  Q
    ||||||| | ||||||||||||||| |||||    
T  13343291 gaaaagcac-aaaccacaagcaaaatataaa 13343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 30182957 - 30182761
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||||||||||||| |  || |||||||||||||||||||||||||||||||||||| |||||| ||  ||| ||| || ||    
T  30182957 tgttgtgaattccggtctcaaaatcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaaacaataatca 30182858  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| ||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||    |||||  |||||||||||||||||||    
T  30182857 acaataac-aacacctagatctaatctaggaaacaaagtgaaaagcacaaaa-cacaagcacaagataaaaggagagaagagagaaacaaacacaccaa 30182761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 36073861 - 36074038
Alignment:
Q  140 aaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctaga 236  Q
    |||| ||||||||||  || |||||||||||||||||||||||||| ||||||||| |||||| ||  ||||||| || ||| |||||||  ||||||||    
T  36073861 aaaaccacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaataacaaagtgaatgcaagcaataatcaacaataacag-cacctaga 36073959  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| ||||    |||||  |||||||||||||||||||    
T  36073960 tctaatctaggaatcaaagtgaaaagcac-aaatcacaagcaaaacataaaaggagagaagagagaaacaaacacaccaa 36074038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 26178255 - 26178088
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| ||| |||||| ||||||||||  || || |||||||||||||||||||||||||||||| || ||||||     ||||||| || ||    
T  26178255 tgttgtgaattccgatctcaaaaccacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagtgtgtgcaagcaataatca 26178156  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    || ||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||    
T  26178155 atgataacaa-cacctagatctaatctaggaatcaaagtgaaaagcataaaa-cacaagcacaagataaa 26178088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 16409846 - 16409681
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| | | ||||||||||||||||  || ||||||||||||||||||||||||||||||||| || ||||||     ||||||| || |||    
T  16409846 tgttgtgaattccg-tacaaaatcacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaaccactaacaaagtgggtgcaagcaataatcaa 16409748  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     |||||| ||||||||||||||||||||||| |||||||||||||  |||| |||||||| ||||||||    
T  16409747 caataac-aacacctagatctaatctaggaaacaaagtgaaaagcataaaa-cacaagcacaagataaa 16409681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 13695495 - 13695689
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaa-ttatgatgtgtggagcaaaggaaagtagtaaccaatat--caaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||  ||||||||||||  ||||| |||| |||| ||||||||||||||| ||| ||||||||  |||||||| | || ||||||||||    
T  13695495 tgttgtgaattcggtctcaaaatcacacacataaacttat-atgtatggagcaaaggaaagaagttaccaatatatcaaagtaacctcaggcaacaacaa 13695593  T
Q  219 taataacaaacacctagatctaa-tctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
     ||||||||  ||||||||||||   ||| ||||||    |||| | |||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  13695594 caataacaa--acctagatctaacagtagtaatcaagcgaaaaaacacaaaacaacaagcaaaggataaagagagaagagaaacaaacacaccaagaa 13695689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 9049209 - 9049317
Alignment:
Q  174 aaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccac 273  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||  | ||| ||||||| ||| |||  ||||||||| | |||||||||    
T  9049209 aaggaaaatagtaaccaatatcaaagtaaccacaagaaacaacaacaataacaa--atctaaatctaatatagaaat-taagtgaaaaacacaaaaccac 9049305  T
Q  274 aagcaaaagata 285  Q
    ||||||||||||    
T  9049306 aagcaaaagata 9049317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 30897770 - 30897582
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaa-ggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||||| | | ||||||||||||||||| |  |||| |||||| ||| || |||||||||| ||||| ||||||    |||||||||||||||    
T  30897770 tgttgtgaattcgtacttaaaatcacaccaataaacttagatgcgtggagtaaaagggaagtagtaacaaatattaaagtagcatcaagcaacaacaata 30897671  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    | |      || || |||||||||||||| ||| ||| |||||  |||| ||||||||||||||| |||||  | ||||||||||||||||||||    
T  30897670 acag-----acttaaatctaatctaggaaccaa-gtgtaaagcataaaatcacaagcaaaagatagagagaaaacagaaacaaacacaccaagaa 30897582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 3075549 - 3075629
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 199  Q
    ||||||||||||||| | |||| |||||||||||  || |||||||||||||||||||||||||| |||||||||||||||    
T  3075549 tgttgtgaattcggactaaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaag 3075629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 287
Target Start/End: Complemental strand, 26171118 - 26170968
Alignment:
Q  138 tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacaccta 234  Q
    |||||| ||||||||||  || || ||||||||||||||||||||||||||| || || ||||||     ||||||| || | || ||||||| ||||||    
T  26171118 tcaaaaccacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaagcactaacaaagtgtgtgcaagcaataatcgatgataacaa-caccta 26171020  T
Q  235 gatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    |||||||||||||||||||| ||||||||  |||| |||||||| ||||||||    
T  26171019 gatctaatctaggaatcaaaatgaaaagcataaaa-cacaagcacaagataaa 26170968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 9789021 - 9789092
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaacca 190  Q
    |||||||||||| ||| |||||| ||||||||||  || |||||||||||||||||||||||||||||||||    
T  9789021 tgttgtgaattccgatctcaaaaccacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaacca 9789092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 42309827 - 42309932
Alignment:
Q  125 tgtgaattcggattcaaaatcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataat 222  Q
    |||||||| ||| ||||||||||| ||||  |||  | ||||| || |||||||||||||  ||||| |||||| ||||| ||||||||||||||||||     
T  42309827 tgtgaattaggactcaaaatcacatcaatgaaaacaaagatgtatgcagcaaaggaaagtgataacctatatcatagtaatcacaagcaacaacaataac 42309926  T
Q  223 aacaaa 228  Q
    ||||||    
T  42309927 aacaaa 42309932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 18441440 - 18441512
Alignment:
Q  121 ctgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaacca 190  Q
    ||||||||||||| ||| |||||| ||||||||||  || || ||||||||||||||||||||||||||||||    
T  18441440 ctgttgtgaattccgatctcaaaaccacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaacca 18441512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 315
Target Start/End: Complemental strand, 30793340 - 30793305
Alignment:
Q  280 aagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||||||||||||||||||||||||||||||||||    
T  30793340 aagataaagagagtagagaaacaaacacaccaagaa 30793305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 12102638 - 12102534
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaataa-attatgatgtgtggagcaaa-----ggaaagtagtaaccaatatcaaagtaaacacaagcaac 213  Q
    |||||||||||||| |  ||||| |||||||||||| | | ||||||||||||||||     ||||||||  ||||||||||||||||| ||||| ||||    
T  12102638 ctgttgtgaattcgtacccaaaactcacaccaataatactttgatgtgtggagcaaattaaaggaaagtataaaccaatatcaaagtaatcacaaccaac 12102539  T
Q  214 aacaa 218  Q
    |||||    
T  12102538 aacaa 12102534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 9299797 - 9299754
Alignment:
Q  271 cacaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    |||||||||||||||||||||| ||||||| || ||||||||||    
T  9299797 cacaagcaaaagataaagagagaagagaaataagcacaccaaga 9299754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 40147610 - 40147555
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat--aaattatgatgtgtggagcaa 174  Q
    ||||||||||||||| |||||| ||||||||||  ||| |||||||||||||||||    
T  40147610 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaa 40147555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 46147195 - 46147387
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||||||||| |  |||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46147195 tgttgtgaattccgcctcaaaactcacaccaatgcaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaa 46147294  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46147295 taataacaat-acctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 46147387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 125 - 312
Target Start/End: Original strand, 47038219 - 47038407
Alignment:
Q  125 tgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataat 222  Q
    |||||||| ||| |||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| |||    
T  47038219 tgtgaatttggactcaaaatcacaccaatacaaactatgatgtgtggaacaaaggaaagtagtaaccaatatcaaagtaaacacaaacaataacaacaat 47038318  T
Q  223 aacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  47038319 aacaa-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 47038407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 48893443 - 48893634
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  48893443 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacaac 48893542  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||  ||||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  48893543 aataacag-cacctagatctaatccaagaatcaaagtgaaaagcacaaaatcacaagcaaaagataaagagagaagagaaacaaacacaccaa 48893634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 122 - 307
Target Start/End: Original strand, 36463196 - 36463382
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||| ||||  || |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  36463196 tgttgtgaattcggactcaaaatcacactaatacaaactatgatgtgtggagtaaaggaaagtaataaccaatatcaaagtaaacacaagcaacaacaat 36463295  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacac 307  Q
    |||||| |||||||||||||||| | | |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  36463296 aataac-aacacctagatctaatttggtaatcaaagcgaaaaactcaaaaccacaagcaaaagataaagagagaagagaaacaaacac 36463382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 45686987 - 45687178
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaa 218  Q
    |||||||||||| || |||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  45686987 tgttgtgaattcagactcaaaatcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaa 45687086  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  45687087 taataacaa-cacctagatc-aatctagtaatcaaagtgaaaagctcaaaaccacaagcaacagataaagagagaaaagaaacaaacacaccaa 45687178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 5872183 - 5871992
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataa 221  Q
    |||||||||| |||| ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  5872183 tgttgtgaatccggactcaaaatcacaccaatacaaactgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaacaacaataa 5872084  T
Q  222 taacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||   |||||| ||||||||||||    
T  5872083 taac-aacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccaaaagcaaaagatagagagagaagagagaatcaaacacaccaa 5871992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 52467159 - 52467350
Alignment:
Q  124 ttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaa-caacaat 219  Q
    ||||||||||||| |||||| |||||||||||  || ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| || ||||    
T  52467159 ttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtgaagcaaaggaaagtggtaaccaatatcaaagtaaagacaagcaatcatcaat 52467258  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52467259 aataacaa-cacatagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 52467350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 26175436 - 26175632
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  26175436 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaatagcaa 26175535  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  26175536 taataac-aacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 26175632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 56178438 - 56178632
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat-a 220  Q
    ||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||  |    
T  56178438 ttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataataaaca 56178537  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    |||||  |||||||||||||||||||    
T  56178538 ataacaa-cacctagatctaatctaggaatgaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 56178632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 34570214 - 34570410
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| || |||    
T  34570214 tgttgcgaattcggattcaaaatcacaccaatataaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaaatgaacacaaacaataatcaa 34570313  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  34570314 caataacaa-cacctagatctaatctaagaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 34570410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 314
Target Start/End: Complemental strand, 31474512 - 31474321
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| ||||  |||||||||||  ||  |||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||     
T  31474512 tgttgtgaattcggactcaa--tcacaccaatacaaacaatgatgtgtgtagcaaatgaaagtagtaatcaatatcaaagtaaacacaaacaacaacaac 31474415  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    |||||||| |||||||||||||||||||||| |||||||||||| ||||| || |||| |||||||||| ||| |||||||||||||||||||||    
T  31474414 aataacaa-cacctagatctaatctaggaattaaagtgaaaagcacaaaatcaaaagctaaagataaagggagaagagaaacaaacacaccaaga 31474321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 9927258 - 9927454
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||||| |||||| || ||||||||  || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||    
T  9927258 tgttgtgaattcggactcaaaactcgcaccaatataaactatgatgtgtggagcaaaggaaagtagttaccaatatcaaagtaaacacaagcaataatca 9927357  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa---agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||   ||||| ||||| ||||||||||||||    
T  9927358 acaataac-agcacctagatttaatctaggaatcaaagtgaaaagcacaaatccacaagcaaaagataaaggagagaatagaggaacaaacacaccaa 9927454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 52082463 - 52082659
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||    
T  52082463 tgttgtgaattcggactcaaaatcacaccaatacaaattatgatgtgtggaacaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaa 52082562  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagag--aaacaaacacaccaa 312  Q
     |||||| | ||||||||||| ||||||||||||||  |||||||  ||||||||||||||||||||||  ||||| ||||  |||||||||||||||    
T  52082563 caataac-agcacctagatcttatctaggaatcaaaaagaaaagcataaaaccacaagcaaaagataaaaggagagaagagataaacaaacacaccaa 52082659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 12743728 - 12743892
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || |||| |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||    
T  12743728 tgttgtgaattcggactcaaaactcacaccaatacaaactatgttgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaag---caacaa 12743824  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  12743825 taataac-aacacctagatctaatctagtaatcaaagtgaaaagcacaaaactacaagcaaaagataaa 12743892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 121 - 315
Target Start/End: Original strand, 6541986 - 6542178
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaataa-attatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||||   |||| ||||| |||||| | | |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  6541986 ctgttgtgaattcggacataaaactcacatcaataatactttgatgtgtggagcaaaggaaagtaataaccaatatcaaagtaatcacaagcaacaacaa 6542085  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||   |||| ||||||||||||||||||||| |||||||||| | ||||| |||||| ||||||||||||||  ||||||||||||||||||||||    
T  6542086 taa---caaa-acctagatctaatctaggaattaaagtgaaaaacacaaaatcacaagaaaaagataaagagataagagaaacaaacacaccaagaa 6542178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 36994824 - 36994695
Alignment:
Q  182 tagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaa 281  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  36994824 tagtaatcaatttcaaagtaaacacaagcaacaacaataataacaa-cacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaa 36994726  T
Q  282 gataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||||| |||||||||||||| ||||    
T  36994725 gataaagagagaagagaaacaaacacgccaa 36994695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 48143417 - 48143216
Alignment:
Q  122 tgttgtgaattc-ggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| ||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||    
T  48143417 tgttgtgaattccggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 48143318  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtg----aaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacac 309  Q
    | |||||| |||||||||||||||||||||||||||||||    |||||| ||||| ||||||||||||||||    |||||  ||||||||||||||||    
T  48143317 acaataac-aacacctagatctaatctaggaatcaaagtgaaaaaaaagcacaaaatcacaagcaaaagataaaaggagagaagagagaaacaaacacac 48143219  T
Q  310 caa 312  Q
    |||    
T  48143218 caa 48143216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 5369881 - 5370049
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | |||||||||||||||||  || |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| || ||    
T  5369881 tgttgtgaattccggtctcaaaatcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatca 5369980  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    | |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5369981 acaataacag-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaa 5370049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 12739353 - 12739546
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||       
T  12739353 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaagaaagtagtaaccaatttcaaagtaaacacaagcaataa--- 12739449  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    ||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  12739450 taataacaa-cacctagatctaatcaagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 12739546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 29254861 - 29254666
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||||||||||||  | |||||||||| ||||  || ||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| ||||    
T  29254861 tgttgtgaattcggaacttaaaatcacactaatacaaactatgatgtgtggagcaaag-aaagtagtaaccaatattaaagtgaacacaaacaacgacaa 29254763  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    ||||| ||||| ||||||||||||||    
T  29254762 taataacaa-cacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaatggagagaatagaggaacaaacacaccaa 29254666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 124 - 315
Target Start/End: Original strand, 37229531 - 37229720
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataat 222  Q
    ||||||||||||| ||||||| | |||||||||  |||| |||||||||||| || ||||||||||||||||||||||||  |||||||| ||||| |||    
T  37229531 ttgtgaattcggactcaaaataaaaccaataaaactatgttgtgtggagcaatgggaagtagtaaccaatatcaaagtaacaacaagcaataacaacaat 37229630  T
Q  223 aacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||| |||  ||||||||||| ||||||| |||||||||||| |||||||| ||| ||||||||||||||| |||||||||||||| |||||||    
T  37229631 aaccaac--ctagatctaatttaggaat-aaagtgaaaagcacaaaaccataagtaaaagataaagagagaagagaaacaaacacgccaagaa 37229720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 52095162 - 52095358
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || ||||| ||||||| |||||||||||||||| |||||||||||| |||||||| || || |||    
T  52095162 tgttgtgaattcggactcaaaatcacaccaatacaaactatgacgtgtggaacaaaggaaagtagtaatcaatatcaaagtgaacacaagtaataatcaa 52095261  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
     |||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||||    |||||  |||||||||||||||||||    
T  52095262 caataacaa-cacctagatctaatctaggagtcaaagagaaaagcacaaaaccacaaggaaaagataaaaggagagaagagagaaacaaacacaccaa 52095358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 311
Target Start/End: Complemental strand, 4588320 - 4588132
Alignment:
Q  122 tgttgtgaattcggattcaaaa--tcacaccaataa-attatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| ||||||  |||||||||||| | | ||||||||||||||||||||| ||||||||| |||||||| || ||||| |||||||||    
T  4588320 tgttgtgaattcggactcaaaaactcacaccaataatactttgatgtgtggagcaaaggaaaatagtaaccactatcaaagcaatcacaaacaacaacaa 4588221  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacacca 311  Q
    |||   |||| ||| | ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||    
T  4588220 taa---caaa-accaatatctaatataggaatcaaagtgaaaagcacaaaatcacaagcaaaagataaagagagaggagaaacaaacacacca 4588132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 121 - 312
Target Start/End: Original strand, 54199707 - 54199903
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||||||| |||||||||||||||||  ||  ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| || ||    
T  54199707 ctgttgtgaattcggactcaaaatcacaccaatacaaacgatgatgtatggagcaaaggaaagtagtaaccagtatcaaagtgaacacaagcaataatca 54199806  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa-gagagtagaga--aacaaacacaccaa 312  Q
      |||||||  ||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||| ||||| |||||  ||||||||||||||    
T  54199807 gcaataacat-cacctagatctaatctaagaatcaaagtgaaaagcacaaatccacaagcaaaatataaaggagagaagagaggaacaaacacaccaa 54199903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 121 - 288
Target Start/End: Complemental strand, 37740995 - 37740825
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-c 216  Q
    ||||||| |||||||| |||||| |||||||||||  || |||||||||||||||| ||||||||||||| |||||||||||| |||| || ||| || |    
T  37740995 ctgttgtaaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcacaggaaagtagtaatcaatatcaaagtgaacagaatcaataatc 37740896  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    || |||||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  37740895 aacaataacag-cacctagatctaatgtaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaag 37740825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 309
Target Start/End: Original strand, 5207667 - 5207833
Alignment:
Q  138 tcaaaatcacaccaata-aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctaga 236  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||||   |||||||||||| | |||||||||||||||  ||     |||||||    
T  5207667 tcaaaatcacaccaatataaatatggtgtgtggagcaaaggaaagtagtaattgatatcaaagtaacctcaagcaacaacaatatcaa-----acctaga 5207761  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacac 309  Q
    |||||| |||||||||| ||||||||| |||||||||| |||| ||||||| |||| ||||||||||| ||||    
T  5207762 tctaatttaggaatcaa-gtgaaaagcacaaaaccacatgcaacagataaatagagaagagaaacaaatacac 5207833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 24970030 - 24969834
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||| | ||||||||||||  ||  |||  | |||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||     
T  24970030 tgttgtgaattcgaactcaaaatcacactgatgaaaacaaagatgtgtg-agcaaaggaaagtagtaaccaatatcaaaataatcacaaccaacaacaag 24969932  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaag---ctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    || |  | ||||||||||||||||||  |||| |||||||||    |||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||    
T  24969931 aa-agtagacacctagatctaatctactaatctaagtgaaaaaaaactcaaaaccataagcaaacgataaagtgagaagagaaacaaacacaccaagaa 24969834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 288
Target Start/End: Complemental strand, 5429989 - 5429879
Alignment:
Q  178 aaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaag 276  Q
    |||||||||| |||||||||||| ||||||| ||| || ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5429989 aaagtagtaatcaatatcaaagtgaacacaaacaataatcaacaataacag-cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaag 5429891  T
Q  277 caaaagataaag 288  Q
     |||||||||||    
T  5429890 taaaagataaag 5429879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 315
Target Start/End: Complemental strand, 29056703 - 29056528
Alignment:
Q  143 atcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacac----ctagatc 238  Q
    |||||| ||||||| |  || |||||||| |||||||| |||||| |||||||||| ||| | |||| |||||||| ||||| ||| |     |||||||    
T  29056703 atcacaacaataaacttagaagtgtggagaaaaggaaaatagtaatcaatatcaaaataacctcaagtaacaacaacaataaaaaaaaaaaaactagatc 29056604  T
Q  239 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||||||||||||| ||||||| | ||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  29056603 taatctaggaatcaa-gtgaaaaacacaaaaccacaaacaaaagataaagagaaaagagaaacaaacacaccaagaa 29056528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 312
Target Start/End: Original strand, 13992112 - 13992288
Alignment:
Q  143 atcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatct 239  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||| |   ||||||| || ||| |||||| | |||||||||||    
T  13992112 atcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataac-agcacctagatct 13992210  T
Q  240 aatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagataa-----agagagtagagaaacaaacacaccaa 312  Q
    |||||||| ||||||||||||||| | ||| ||||||| |||||||||     |||||  |||||||||||||||||||    
T  13992211 aatctaggtatcaaagtgaaaagcac-aaatcacaagcaaaaagataaaagggagagaagagagaaacaaacacaccaa 13992288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 312
Target Start/End: Original strand, 48142206 - 48142372
Alignment:
Q  141 aaatcacaccaataaa--ttatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatc 238  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||| |||||||   ||| ||||| ||| |||||||| || | |        
T  48142206 aaatcacaccaataaaactta-gatgtgtggagcaaaggaaagtaataaccaatattaaagtaacatcaaacaacagcaacaataacaa-caacaa---- 48142299  T
Q  239 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||| ||||||| |   ||||||||| |||||||||||||||| |||||||||||||||||||    
T  48142300 taatctaggaatcaa-gtgaaaaacattaaaccacaatcaaaagataaagagagaagagaaacaaacacaccaa 48142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 5350268 - 5350081
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||||||| |||||  ||||||||||||| |  | |||||| || |||||||||||||||||||||| ||| |||   || | |||||||| |    
T  5350268 tgttgtgaattcggactcaaatctcacaccaataaacttaggtgtgtgaagtaaaggaaagtagtaaccaatataaaa-taacatcacgtaacaacaaca 5350170  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||  |||||||| ||  ||||||||| ||||||| | ||| || |||| |||||||||| ||||| |||||||||||||||||||    
T  5350169 ataacaaac--ctagatctcatacaggaatcaa-gtgaaaaacacaagactacaaacaaaagataacgagagaagagaaacaaacacaccaa 5350081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 29999628 - 29999709
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 200  Q
    |||||||||||| | | |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  29999628 tgttgtgaattccggtctcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 29999709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 5280598 - 5280703
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataata 223  Q
    |||||||||||   |||||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||||||| ||| | | |||||| |||| ||||    
T  5280598 ttgtgaattcgagctcaaaatcactccaataaatttagatgtgtggagtaaaggtaagtagtaaccaatatcaaaataacctcgagcaacgacaacaata 5280697  T
Q  224 acaaac 229  Q
    ||||||    
T  5280698 acaaac 5280703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 37754789 - 37754958
Alignment:
Q  138 tcaaaatcacaccaataaattatgatgtgtggagcaaagga-aagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctaga 236  Q
    ||||||||| ||||||||| |  ||||||||||||||| || || || |||||||||||||| ||| | ||||||||||||| |         |||||||    
T  37754789 tcaaaatcaaaccaataaacttagatgtgtggagcaaaagagaattattaaccaatatcaaattaacctcaagcaacaacaacag--------acctaga 37754880  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||||||||| ||||| ||  ||||| ||||||||||| || ||||||||||||| ||| |||||||||||| |||||    
T  37754881 tctaatctagggatcaa-gtataaagcccaaaaccacaaacataagataaagagagaagaaaaacaaacacactaagaa 37754958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 3913876 - 3913777
Alignment:
Q  185 taaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagat 284  Q
    |||||||||||||||||||||||||||| |||||||| | ||     ||| |||||||||||||||||||||||||||   ||||||||||| ||||||     
T  3913876 taaccaatatcaaagtaaacacaagcaataacaataagagcat----ctatatctaatctaggaatcaaagtgaaaagtataaaaccacaagtaaaagaa 3913781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 51338392 - 51338337
Alignment:
Q  166 gtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataa 221  Q
    |||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||    
T  51338392 gtggagcaaatgaaagtagtaatcaatatcaaagtagtcacaagcaacaacaataa 51338337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 29999719 - 29999805
Alignment:
Q  229 cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||||||||||| ||||| | | ||||||||||||||||| ||    |||||  |||||||||||||||||||    
T  29999719 cacctagatctaatctaggaatcaaagagaaaaacac-aaaccacaagcaaaagacaaaaggagagaagagagaaacaaacacaccaa 29999805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 304
Target Start/End: Original strand, 44967677 - 44967815
Alignment:
Q  165 tgtggagca-aaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaagc 263  Q
    ||||||||| || |||||||||||| ||||||||||||| | ||||||||||||| | ||| |||||  || ||||||||||  |||| ||||| ||| |    
T  44967677 tgtggagcataaagaaagtagtaactaatatcaaagtaacctcaagcaacaacaacactaataaaca--tatatctaatctaaaaatc-aagtgtaaaac 44967773  T
Q  264 tcaaaaccacaagcaaaa-gataaagagagtagagaaacaaa 304  Q
     ||||||||||| |||||  ||||||||||  ||||||||||    
T  44967774 acaaaaccacaatcaaaattataaagagagaggagaaacaaa 44967815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 39593647 - 39593732
Alignment:
Q  231 cctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaat 316  Q
    |||||||||||||||| || ||||   |||||| ||||||| ||||||||||||||  ||||  |||| |||||||||||||||||    
T  39593647 cctagatctaatctagaaaccaaatgtaaaagcacaaaaccgcaagcaaaagataagaagagaggagacacaaacacaccaagaat 39593732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 51337306 - 51337237
Alignment:
Q  242 tctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacacca 311  Q
    ||||||||||  |||||| ||| ||||| ||||||||||||||||| |||| ||| ||||||||||||||    
T  51337306 tctaggaatcggagtgaagagcacaaaatcacaagcaaaagataaaaagagaagataaacaaacacacca 51337237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 16420843 - 16420909
Alignment:
Q  161 gatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaa 227  Q
    ||||||||||| ||| | ||||||||||| |||||||||||  | ||||||||||||| ||||||||    
T  16420843 gatgtgtggagtaaaaggaagtagtaaccgatatcaaagtagcctcaagcaacaacaacaataacaa 16420909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 21703784 - 21703834
Alignment:
Q  265 caaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||| ||||||    
T  21703784 caaaatcacaagcaaaatataaagagagaagagaaacaaacacatcaagaa 21703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 31495214 - 31495271
Alignment:
Q  229 cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    ||||||||||||||||||||| |||||||||||||  |||| |||||||| ||||||||    
T  31495214 cacctagatctaatctaggaaacaaagtgaaaagcataaaa-cacaagcacaagataaa 31495271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 31495142 - 31495174
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaacca 190  Q
    |||||||||||||||||||||||||||||||||    
T  31495142 tatgatgtgtggagcaaaggaaagtagtaacca 31495174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 21703692 - 21703746
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaa 175  Q
    |||||||||||||| | ||||||||||| ||||||| |  |||||||||||||||    
T  21703692 ctgttgtgaattcgaactcaaaatcacagcaataaacttagatgtgtggagcaaa 21703746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 4e-69; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 120 - 312
Target Start/End: Original strand, 41317236 - 41317430
Alignment:
Q  120 tctgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaac 216  Q
    ||||||||||||||| | |||||  |||||||||||  || |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41317236 tctgttgtgaattcgaactcaaatctcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaac 41317335  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  41317336 aataataacaa-cacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaggagaaacaaacacaccaa 41317430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 36146212 - 36146404
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaa 218  Q
    ||||||||||||||| ||||||| |||| ||||  || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  36146212 tgttgtgaattcggactcaaaattacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaa 36146311  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  36146312 taataacaa-catctagatctaatctagtaatcaaagtgaaaagctaaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 36146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 41648814 - 41649007
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||     
T  41648814 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatatcaaagtgaacacaagcaataacaac 41648913  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  41648914 aatagcag-cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 41649007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 8153705 - 8153514
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||| ||||||||| |||||||||||| ||||  || ||||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  8153705 tgttgggaattcggactcaaaatcacactaatacaaactatgatgcgtggagcaaaggaaagtagtaatcaatatcaaagtgagcacaagcaacaacaat 8153606  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||| ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  8153605 aataacaa-cacctagatctgatctaataatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaataaacacaccaa 8153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 47675936 - 47676132
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||||||||||||  ||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47675936 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaa 47676035  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  47676036 taataac-aacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaatggagagaagagaggaacaaacacaccaa 47676132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 38671025 - 38671218
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||| ||||||| || |||||||| |||||||||||| |||||    
T  38671025 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaacaaaaatcaaagtgaacacaagcaacgacaat 38671124  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa--agagagtagagaaacaaacacaccaa 312  Q
    ||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  |||||  |||||||||||||||||||    
T  38671125 aatgacaa-cacctagatcaaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaggagagaagagagaaacaaacacaccaa 38671218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 14069633 - 14069801
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||    
T  14069633 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaacacaagcaacaataa 14069732  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14069733 taataac-aacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaag 14069801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 14379661 - 14379829
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||    
T  14379661 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaacacaagcaacaataa 14379760  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14379761 taataac-aacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaag 14379829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 24525306 - 24525498
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaa 218  Q
    ||||||||||||  ||||||||||||| |||||  || |||||| |||| ||||||| |||||||||| ||||||||||| ||||| |||||||||||||    
T  24525306 tgttgtgaattcaaattcaaaatcacatcaatacaaactatgatatgtgtagcaaagaaaagtagtaatcaatatcaaagcaaacaacaagcaacaacaa 24525405  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24525406 taataacaa-cacctagatcaaatttagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 24525498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 120 - 315
Target Start/End: Original strand, 31105198 - 31105392
Alignment:
Q  120 tctgttgtgaattcggattcaaaa-tcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    ||||||||||||||| |  ||||| |||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  31105198 tctgttgtgaattcgaacacaaaactcacaccaataaaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagtaaacacaagcaacaaca 31105297  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||     |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||    
T  31105298 ataa----caacaccaagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaaagataaggagagaagagaaacaaacagaccaagaa 31105392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 1114021 - 1113829
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||||||||| || |||||| ||||| |||||  || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  1114021 tgttgtgaattccgaatcaaaactcacatcaatacaaactatgatgtgtggagcaaaggaaagtggtaactaatatcaaagtaaacacaagcaataacaa 1113922  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
     ||||| || |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  1113921 caataataa-cacctagatctaatctaggaatcaaaatgaaaaacacaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 1113829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 123 - 288
Target Start/End: Complemental strand, 48489798 - 48489631
Alignment:
Q  123 gttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caat 219  Q
    |||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| || |||     
T  48489798 gttgtgaattcggactcaaaatcacaccaataccaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacatgagcaataatcaac 48489699  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48489698 aataacaa-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaag 48489631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 119 - 312
Target Start/End: Original strand, 495785 - 495979
Alignment:
Q  119 ttctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaac 216  Q
    ||||| ||| |||| ||| |||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  495785 ttctgctgtaaatttggactcaaaatcacactaatacaaattatgatatgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaaacaataac 495884  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    || |||||| |||||||||||||||||||||||||||||||||||    |||| ||||||||| |||||||||||| | |||||||||||||||||    
T  495885 aacaataac-aacacctagatctaatctaggaatcaaagtgaaaaatagaaaatcacaagcaagagataaagagagaaaagaaacaaacacaccaa 495979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 121 - 312
Target Start/End: Complemental strand, 19502548 - 19502351
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    ||||||||||||| || |||||| |||||| ||||  || ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19502548 ctgttgtgaattcagactcaaaactcacactaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaatacaagcaacaaca 19502449  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| || ||||    |||||  |||||||||||||||||||    
T  19502448 ataataac-aacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcacaaaataaagggagagaagagagaaacaaacacaccaa 19502351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 119 - 312
Target Start/End: Complemental strand, 25616226 - 25616026
Alignment:
Q  119 ttctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa- 215  Q
    ||||||||||||| || | |||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||     
T  25616226 ttctgttgtgaatacgtactcaaaatcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataat 25616127  T
Q  216 caataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag-----tagagaaacaaacacacc 310  Q
    ||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||      |||||||||||||||||    
T  25616126 caacaataacaa-cacctagatctaatctaggaatcgaagtgaaaagcacaaaaccacaagcacaagataaagagagaagaagagagaaacaaacacacc 25616028  T
Q  311 aa 312  Q
    ||    
T  25616027 aa 25616026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 27348185 - 27347989
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| || |||    
T  27348185 tgttgtgaattcggactcaaaatcacacaaatacaaattatgatgtgtggagcaaaggaaagtagcaaccaatatcaaagtgaacacaaacaataatcaa 27348086  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||||  ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  27348085 caataacag-cacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaagtgagagaagagaggaacaaacacaccaa 27347989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 18127015 - 18126846
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||||| |||||| |||||||||||  || |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| || ||    
T  18127015 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatca 18126916  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18126915 agaataacaa-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaag 18126846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 48491944 - 48491754
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||||||||||||||||||||||||  || ||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||| || |||    
T  48491944 tgttgtgaattcggattcaaaatcacaccaataccaactataatgtgcggagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaa 48491845  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagagaaacaaacaca 308  Q
     |||||||| | |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||  ||||| |||| ||||||||||    
T  48491844 caataacaa-cgcctagatctaatataggaatcaaaatgaaaagcacaaaaccacaagcaaaagataaagggagagaagaggaacaaacaca 48491754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 23344332 - 23344142
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    |||||||||||| ||  |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||       
T  23344332 tgttgtgaattcagacccaaaatcacatcaataaaactatgatgtgtggagcaaaggaaagtagtaaccaatatccaagtaaccacaagcaacaaca--- 23344236  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||| |||||||| ||||||| ||||||||||||||| | ||||||| |||| || |||||||||||| ||||||||| ||||||||||||    
T  23344235 ataacaaa-acctagatttaatctacgaatcaaagtgaaaaacacaaaaccgcaagaaagagataaagagagaagagaaacatacacaccaagaa 23344142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 26417685 - 26417485
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||||| |||||| |||||||||||  || |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| || ||    
T  26417685 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatatgtggagtaaaggaaagtagtaaccaatatcaaagtaaccacaagcaataatca 26417586  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaag 313  Q
    | |||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| |||||  |||||||||||||||    
T  26417585 acaataacag-cacctagatataatctatgaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaag 26417487  T
Q  314 aa 315  Q
    ||    
T  26417486 aa 26417485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 47673744 - 47673940
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||| ||||||||||  ||||| |||||||||||  || ||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||||||    
T  47673744 tgttatgaattcggacacaaaactcacaccaatacaaactatgatgtgtggaacaaaagaaagtagtaaccaatatcaaagtgaacacaaacaacaacaa 47673843  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  47673844 taataac-aacacctagatctaatctagtaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 47673940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 23555410 - 23555242
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||    
T  23555410 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 23555311  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    | |||||| |||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||||    
T  23555310 acaataac-aacacctagatctaatctaggaatcaaagtaaaaaacacaataccacaagcaaaagataaa 23555242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 125 - 315
Target Start/End: Original strand, 23564874 - 23565061
Alignment:
Q  125 tgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataa 224  Q
    ||||||||| || |||||||||||| ||||||    |||||||||||  ||| |||||||| |||||||||||||||| ||||||||||||||||||       
T  23564874 tgtgaattcagactcaaaatcacactaataaacatagatgtgtggagtgaagaaaagtagtgaccaatatcaaagtaaccacaagcaacaacaataa--- 23564970  T
Q  225 caaacacctagatctaatctaggaatcaaagtgaaaagctcaaaa-ccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||| ||||||||||||||||| |||||||||||||| | ||||| |||||||||||||||||| |||| ||||||||||||||||||||||    
T  23564971 caaa-acctagatctaatctagaaatcaaagtgaaaatcacaaaaaccacaagcaaaagataaatagagaagagaaacaaacacaccaagaa 23565061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 311
Target Start/End: Complemental strand, 43864609 - 43864417
Alignment:
Q  126 gtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataa 221  Q
    ||||||||||| |||||| |||||||||||  || |||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||| ||    
T  43864609 gtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtggtaatcaatatcaaagtgaacacaagcaataatcaacaa 43864510  T
Q  222 taacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacacca 311  Q
    |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||  |||||||||||||    
T  43864509 taacag-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacacca 43864417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 4586530 - 4586361
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||  ||||||||||  ||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||| || ||    
T  4586530 tgttgtgaattcggactcaaatctcacaccaatgtaaactatgatgtgtggagcaaaggaaagtggtaaccaatttcaaagtgaacacaagcaataataa 4586431  T
Q  219 t-aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
      |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  4586430 acaataacaa-cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaag 4586361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 30024562 - 30024714
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||| |||||||| ||||||||| |||||||  || |||||||     | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30024562 tgttgtaaattcggactcaaaatcataccaatataaactatgatg-----aacaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaat 30024656  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagca 278  Q
    |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  30024657 aataac-aacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagca 30024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 121 - 288
Target Start/End: Original strand, 31732767 - 31732937
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-c 216  Q
    |||||||||||||||| |||||| |||||||| ||  || |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| || |    
T  31732767 ctgttgtgaattcggactcaaaactcacaccagtacaaactatgatgtgtggagcaaatgaaagtagtaaccaatttcaaagtgaacacaagcaataatc 31732866  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    || |||||||| |   |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31732867 aacaataacaacctt-tagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaag 31732937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 144 - 315
Target Start/End: Original strand, 36574347 - 36574515
Alignment:
Q  144 tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatc 243  Q
    ||||||||||||| |  |||||||||| ||||||||| || |||||||||||||||||| | || || ||||||| ||||||||  || |||||||||||    
T  36574347 tcacaccaataaacttagatgtgtggatcaaaggaaaatattaaccaatatcaaagtaatctcaggccacaacaacaataacaa--acttagatctaatc 36574444  T
Q  244 taggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||| ||||||||| | |||||||||||| ||||||||||||||| ||| ||||||||||| ||||||    
T  36574445 taggaatc-aagtgaaaaacacaaaaccacaagaaaaagataaagagagaagaaaaacaaacacatcaagaa 36574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 29991422 - 29991226
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||| |||||||||||  || ||||||||||||||||||| ||||||||||||||||||||||| | |||||| || || ||    
T  29991422 tgttgtgaattccgttctcaaagtcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaaccaatatcaaagtgagcacaagtaataatca 29991323  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| |||||||||||||||| |||||||||||| ||||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  29991322 acaataac-aacacctagatctaatataggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 29991226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 31519258 - 31519072
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat-aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||| ||| |||||| |||| ||||| ||| || |||||||||||||||  ||| ||||||  |||||||| |||| || ||||| |||||||    
T  31519258 tgttgtgaatttggactcaaaactcacgccaatgaaaataagatgtgtggagcaaataaaaatagtaattaatatcaatgtaatcataagcagcaacaat 31519159  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||||| || ||||||||||||||||||||||    
T  31519158 aataacaa-cacctagatctaatctaggaatcaaagtgaaaag--------cacaagcaaaagataaagaaagaagagaaacaaacacaccaagaa 31519072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 314
Target Start/End: Complemental strand, 35854268 - 35854086
Alignment:
Q  138 tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacaccta 234  Q
    |||||||||||| ||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| |||||| | ||||||    
T  35854268 tcaaaatcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatcaacaataac-agcaccta 35854170  T
Q  235 gatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa-----agagagtagagaaacaaacacaccaaga 314  Q
    ||||||||||||||| |||||||||||||  |||| |||||||| |||||||     |||||  |||||||||||||||||||||    
T  35854169 gatctaatctaggaagcaaagtgaaaagcataaaa-cacaagcacaagataaaagggagagaagagagaaacaaacacaccaaga 35854086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 315
Target Start/End: Original strand, 4253359 - 4253527
Alignment:
Q  144 tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatc 243  Q
    ||||||||||||| |  |||||||| |||||| ||||||| |||||||||||||||||| | || |||||||||||||||  ||| |||||||||||||     
T  4253359 tcacaccaataaacttagatgtgtgtagcaaaagaaagtattaaccaatatcaaagtaacctcaggcaacaacaataata--aaaaacctagatctaata 4253456  T
Q  244 taggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||| |||| ||| ||||||  ||||| |||||||||| ||||||||| | ||||||||||||||||||||||    
T  4253457 tagaaatc-aagcgaaaagtacaaaagcacaagcaaacgataaagagtgaagagaaacaaacacaccaagaa 4253527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 312
Target Start/End: Complemental strand, 4179122 - 4178946
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||| ||   |||||| || ||| |||||| | |||||||||    
T  4179122 aaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgtaagcaataatcaacaataac-agcacctagat 4179024  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    |||||||||||||||||||||||| | | ||||||||||||||| ||||    |||||  |||||||||||||||||||    
T  4179023 ctaatctaggaatcaaagtgaaaaacac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 4178946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 12097789 - 12097863
Alignment:
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12097789 ctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 12097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 161 - 312
Target Start/End: Complemental strand, 40808909 - 40808760
Alignment:
Q  161 gatgtgtggagcaaa-ggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaa 259  Q
    ||||||||||||||| ||||||||||||| ||||||||||||  | ||||||||||||||||||||  | |||||| | ||||||||| | | ||||| |    
T  40808909 gatgtgtggagcaaaaggaaagtagtaacaaatatcaaagtattctcaagcaacaacaataataac--agacctaggtttaatctagg-acccaagtgta 40808813  T
Q  260 aagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    || | ||||||||||||||||||||| |||||| | |||||||||||||||||    
T  40808812 aaacacaaaaccacaagcaaaagatatagagagaaaagaaacaaacacaccaa 40808760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 12096969 - 12097084
Alignment:
Q  125 tgtgaattcggattcaaaatcacacca-ataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataata 223  Q
    |||||||||||| |||||||||||||| ||||| |||||||  ||||  |||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  12096969 tgtgaattcggactcaaaatcacaccatataaactatgatgcttggaataaaggaaagtagtaaccaatatcaaagtgaacacaatcaacaacaataaca 12097068  T
Q  224 acaaacacctagatcta 240  Q
    || ||||||||||||||    
T  12097069 ac-aacacctagatcta 12097084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 315
Target Start/End: Complemental strand, 48409156 - 48408975
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||| |   ||||||| || ||| |||||| | |||||||||    
T  48409156 aaatcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataac-agcacctagat 48409058  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagataa-----agagagtagagaaacaaacacaccaagaa 315  Q
    |||||||||| ||||||||||||||| | ||| ||||||| |||||||||     |||||  ||||||||||||||||||||||    
T  48409057 ctaatctaggtatcaaagtgaaaagcac-aaatcacaagcaaaaagataaaagggagagaagagagaaacaaacacaccaagaa 48408975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 141 - 314
Target Start/End: Original strand, 25766776 - 25766956
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  || ||||||||||||||||||| |||||||||||||||| |||||| | | ||||||| || ||| |||||| | |||||||||    
T  25766776 aaatcacaccaatacgaaatatgatgtgtggagcaaagaaaagtagtaaccaataacaaagtgagcgcaagcaataatcaacaataac-agcacctagat 25766874  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagataa-----agagagtagagaaacaaacacaccaaga 314  Q
    |||||||||| ||||||||||||| | | ||| ||||||| |||||||||     ||||| ||||||||||||||||||||||    
T  25766875 ctaatctaggtatcaaagtgaaaaacac-aaatcacaagcaaaaagataaaagggagagaatagagaaacaaacacaccaaga 25766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 315
Target Start/End: Original strand, 3904275 - 3904466
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataat- 222  Q
    ||||||||| | | ||||||| ||||| |||||||  ||||||||||| ||| | | ||||||| |||||||||||||| | |||||||| |||| |||     
T  3904275 ttgtgaatttgaactcaaaatgacacctataaatttagatgtgtggagtaaaaggaggtagtaatcaatatcaaagtaaccgcaagcaacgacaacaata 3904374  T
Q  223 aacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    || ||| ||||| |||| || |||||| | ||||| ||||  | ||||||||| ||||||||||||| |  ||||||||||||| ||||||||    
T  3904375 aaaaaaaacctacatctgatataggaa-ccaagtgtaaagaacgaaaccacaaccaaaagataaagatataagagaaacaaacataccaagaa 3904466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 30843285 - 30843367
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagc-aaaggaaagtagtaaccaatatcaaagtaa 202  Q
    ||||||||||||| || ||||||||||||||||||| |  || ||||||||| ||||||||||||||||||||||||||||||    
T  30843285 ctgttgtgaattcagaatcaaaatcacaccaataaacttagaagtgtggagcaaaaggaaagtagtaaccaatatcaaagtaa 30843367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 39731687 - 39731573
Alignment:
Q  172 caaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaac 270  Q
    ||||| |||||||||||||||| ||||||     ||||||| || ||| |||||||| ||||||||||||||||||||| ||||||||||||| | ||||    
T  39731687 caaagaaaagtagtaaccaataacaaagtgggtgcaagcaataatcaacaataacaa-cacctagatctaatctaggaaacaaagtgaaaagcac-aaac 39731590  T
Q  271 cacaagcaaaagataaa 287  Q
    |||||||| ||||||||    
T  39731589 cacaagcacaagataaa 39731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 43504057 - 43504117
Alignment:
Q  226 aaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    ||||| ||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||    
T  43504057 aaacagctagatctaatctaggaatcaaagtgaaaagcataaaa-cacaagcacaagataaa 43504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 26639544 - 26639494
Alignment:
Q  266 aaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaat 316  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||    
T  26639544 aaaaccacaagcaaaaggtaaagagataagagaaacaaacgcaccaagaat 26639494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 6430496 - 6430441
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat--aaattatgatgtgtggagcaa 174  Q
    ||||||||||||||| |||||| ||||||||||  ||| |||||||||||||||||    
T  6430496 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaa 6430441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 306
Target Start/End: Complemental strand, 18396563 - 18396488
Alignment:
Q  230 acctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaaca 306  Q
    |||||||| ||||||||||| ||| |  |||| ||||||| |||||| | ||| ||||||||| |||||||||||||    
T  18396563 acctagatttaatctaggaaccaagggtaaaa-ctcaaaatcacaagtagaaggtaaagagagaagagaaacaaaca 18396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 40321442 - 40321256
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacacca-ataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    |||||||||||| || |||||||||||| | | ||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  40321442 tgttgtgaattccgactcaaaatcacacaatacaaactatgatatgtggagcaaaggaaagtagcaatcaatatcaaagtaaacacaagcaacaacaata 40321343  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacaca 308  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40321342 ataacaa-cacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacaca 40321256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 1345176 - 1345367
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||||||||||||||||||||||| ||||  ||  || || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1345176 tgttgtgaattcggattcaaaatcacacaaatacaaacaataatctgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaaacaacaacaat 1345275  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||| || |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  1345276 aataataa-cacctagatctaatctagtaatcaaagtgaaaatctcaaaatcacaagcaaaagataaagagagaagagaaacaaacacaccaa 1345367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 5689635 - 5689447
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaa 218  Q
    |||||||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5689635 tgttgtgaattccgactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaa 5689536  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacaca 308  Q
    ||||||||| || ||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  5689535 taataacaa-catctaaatctaatttagtaatcaaagtgaaaagctcaaaaccacaagtaaaagataaagagagaagagaaacaaacaca 5689447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 41366420 - 41366611
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataa 221  Q
    ||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  41366420 ttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacaacaa 41366519  T
Q  222 taacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa-gagagtagagaaac-aaacacaccaa 312  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| | ||| |||||||| |||||||||||    
T  41366520 taac-aacacctagatctaatataggaatcaaagtgaaaagcacaaaaccacaaacaaaagataaatgggagaagagaaacaaaacacaccaa 41366611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 30143708 - 30143512
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| || |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||    
T  30143708 tgttgtgaattcagactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaa 30143609  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  30143608 caataacaa-cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 30143512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 6599333 - 6599144
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||| |||||||   ||||||||    
T  6599333 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaa---acaacaat 6599237  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaac-aaacacaccaa 312  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  6599236 aataacaa-cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagaaaaagataaagggagaagagaaacaaaacacaccaa 6599144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 6674786 - 6674597
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||| |||||||   ||||||||    
T  6674786 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgaacacaa---acaacaat 6674690  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaac-aaacacaccaa 312  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  6674689 aataacaa-cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagaaaaagataaagggagaagagaaacaaaacacaccaa 6674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 122 - 314
Target Start/End: Original strand, 19491503 - 19491696
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||| ||  |||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||     
T  19491503 tgttgtgaattcggactcaaaactctaaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaatatcaaagtaaacacaagtaacaacaac 19491602  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  19491603 aataacaa-cacctatatctaatctaggaatcaaagtaaaaagctcaaaaccacaaacaaaagataaagtgagaaaagaaacaaacacaccaaga 19491696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 12702431 - 12702602
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| ||||||||||| |||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12702431 tgttgtgaattcggactcaaaatcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 12702530  T
Q  220 aataacaa--acacctagatctaatctag-gaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||||  |||||||||||||||||||  |||||||||||||| | |||||||||||||| |||||||||    
T  12702531 aataacaacgacacctagatctaatctagaaaatcaaagtgaaaaacacaaaaccacaagcacaagataaag 12702602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 118 - 315
Target Start/End: Complemental strand, 10015447 - 10015248
Alignment:
Q  118 attctgttgtgaattcggattcaaaa-tcacaccaat--aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaaca 214  Q
    ||||||||||||||||||||| |||| | ||||||||  |||  | ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |    
T  10015447 attctgttgtgaattcggatttaaaacttacaccaatgaaaacaaagatgtgtggagcagaggaaagtaataaccaatatcaaagtgaacacaagcaaaa 10015348  T
Q  215 acaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    |||||||||||||  ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  10015347 acaataataacaat-acctagatctaatttagtaatcaaagtgaaaagttcaaaaccacaagcaaaagataaggagagaagagaaacaaatacaccaaga 10015249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 18105876 - 18106058
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||| ||||||| || |||||||||||| ||||  || |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  18105876 tgttatgaattcagactcaaaatcacactaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatattaaagtaaacacaagcaataacaac 18105975  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaa 303  Q
    |||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| ||||||||||    
T  18105976 aataacat-cacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcaaaagataaagagagaagagaaacaa 18106058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 162 - 315
Target Start/End: Original strand, 1292311 - 1292463
Alignment:
Q  162 atgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaa 261  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||||| |  ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  1292311 atgtggggagcaaagaaaagtagtaaacaatatcaaagtaaacacaagtagtaacaacaataacaa-cacctagatctaatctaggaatcaaagtgaaaa 1292409  T
Q  262 gctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  1292410 gctcaaaaccacgagcaaaagataaggagagaagagaaacaaacacaccaagaa 1292463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 126 - 312
Target Start/End: Original strand, 3303474 - 3303666
Alignment:
Q  126 gtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataat 222  Q
    ||||||||||| |||||  |||||||||||  || ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  3303474 gtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtggtaaccaatatcaaaacaaacacaagcaacaacaataat 3303573  T
Q  223 aacaaacacctagatctaatctagg----aatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||  ||||||||||||||||||||    |||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  3303574 aac-tacacctagatctaatctaggaatcaatcaaagtgaaaagtacaaaatcacaagcaaaagataaagagagaagagaaacaaacacaccaa 3303666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 43036791 - 43036595
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||| |||||| ||| |||||| |||||||||||  ||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43036791 tgttatgaatttggactcaaaactcacaccaatacaaaaaatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaa 43036692  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    ||| ||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  43036691 taacaac-accacctagatctaatctagtaaccaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 43036595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 4732026 - 4731830
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||| | |||||||||||||||||  ||  ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| || |||    
T  4732026 tgttgtgaattcgaactcaaaatcacaccaatacaaacaatgatgtgtggagcaaaggaaagtagtaaccgatatcaaagtgaacacaaacaataatcaa 4731927  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  4731926 caataacag-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 4731830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 4743027 - 4743210
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||||| |||||  |||||||||||  || ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||    
T  4743027 tgttgtgaattcggactcaaatctcacaccaatacaaactataatgtgtggagcaaaggaaagtggtaaccaataccaaagtaaacacaagcaataacaa 4743126  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
              ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  4743127 ----------cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcgaaagataaagagagaagagaaacaaacacaccaa 4743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 15213155 - 15212958
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||    
T  15213155 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatca 15213056  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    | |||||||  ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  15213055 acaataacag-caccttgatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 15212958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 139 - 312
Target Start/End: Complemental strand, 42498546 - 42498367
Alignment:
Q  139 caaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaac-aataataacaaacacctag 235  Q
    ||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||  || |||||||| |||||||    
T  42498546 caaaatcacaccaatacaaaatatgatgtgtggagcaaaggaaagtagcaaccaatatcaaagtgaacacaagcaataattaacaataacaa-cacctag 42498448  T
Q  236 atctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtaga--gaaacaaacacaccaa 312  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||| |||  ||||||||||||||||    
T  42498447 atctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagggaaacaaacacaccaa 42498367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 33352518 - 33352351
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||| | |||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| || |||    
T  33352518 tgttgtgaattcgtactcaaaatcacaccaatataaattatgatatgtggagcaaaggaaagtaataaccaatatcaaagtgaacacaagcaataatcaa 33352419  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     |||||| |||||||| ||||||||||| |||||||||||||| | |||| ||||||||||||||||||    
T  33352418 caataac-aacacctaaatctaatctagaaatcaaagtgaaaaacacaaatccacaagcaaaagataaa 33352351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 44304224 - 44304028
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaataaat--tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| || ||    
T  44304224 tgttgtgaattccgttctcaaaatcacaccaatacatactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagcacaagcaataatca 44304125  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  44304124 acaataac-aacacctagatctaatctagaaatcaaagtgaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 44304028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 122 - 304
Target Start/End: Complemental strand, 8154147 - 8153967
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||||||  |||||||||||| ||||||  ||||||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8154147 tgttgtgaattcgggctcaaaatcacactaataaaactatgatgtgtgaagtaaaggaaagtagtaatcaatatcaaagtaaccacaagcaacaacaata 8154048  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaa 304  Q
    |||||||  |||||||| |||||||||||| |||||||||| | |||||  ||| |||||||||||| | || |||||||||||    
T  8154047 ataacaa--acctagatgtaatctaggaat-aaagtgaaaaacacaaaattacatgcaaaagataaacaaagaagagaaacaaa 8153967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 18142105 - 18141990
Alignment:
Q  196 aaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtag 295  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18142105 aaagtaaacacaagcaacaataataataacaa-cacctacatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagcag 18142007  T
Q  296 agaaacaaacacaccaa 312  Q
    |||||||| ||||||||    
T  18142006 agaaacaagcacaccaa 18141990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 121 - 312
Target Start/End: Complemental strand, 4734076 - 4733878
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaataaatt---atgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-c 216  Q
    |||||||||||||||||||||||| ||||||||| |     |||||||||||||||||||||||||||||||||||||||| | ||||||||||| || |    
T  4734076 ctgttgtgaattcggattcaaaattacaccaatacaaaccaatgatgtgtggagcaaaggaaagtagtaaccaatatcaaaatgaacacaagcaataatc 4733977  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag--agagtagaga--aacaaacacaccaa 312  Q
    || |||||| |||||||||||| ||| |||||| |||| |||||||| |||||||||||| |||||||||||  |||| |||||  ||||||||||||||    
T  4733976 aacaataac-aacacctagatcaaatgtaggaaacaaaatgaaaagcacaaaaccacaaggaaaagataaaggtagagaagagaggaacaaacacaccaa 4733878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 27811608 - 27811478
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagt 256  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||| |||||||| |||||||||||||| |||||||||||||    
T  27811608 tatgatgtgtggaggaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaa-cacctagatctaatttaggaatcaaagt 27811510  T
Q  257 gaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||| ||||| ||||||||||||||||||    
T  27811509 gaaaagcacaaaatcacaagcaaaagataaag 27811478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 17983021 - 17982826
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| |||   ||||||||||||||  || |||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| || |||    
T  17983021 tgttgtgaattccgatctcaaatcacaccaatacaaactatgatgtgtggagcaaaggaacgtagtaaccaataacaaagtgaacacaagcaataatcaa 17982922  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
     |||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    |||||  |||||||||||||||||||    
T  17982921 caataac-agcacctagatctaatctaggaatcaaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 17982826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 128 - 309
Target Start/End: Original strand, 3073686 - 3073867
Alignment:
Q  128 gaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacaca---agcaacaacaataataa 224  Q
    ||||||||| |||||| |||||||||||| ||| || ||||||||||||||||||| |||||| ||||||||||| ||||   |||| |||||| || ||    
T  3073686 gaattcggactcaaaaacacaccaataaactatcatatgtggagcaaaggaaagtaataaccagtatcaaagtaaccacaatgagcagcaacaacaacaa 3073785  T
Q  225 caaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacac 309  Q
    |||  |||||||| |||||||||||| |||||||| ||  |||||||||||||||||||||||||||  ||||||||||||||||    
T  3073786 caa--acctagatttaatctaggaat-aaagtgaagagtacaaaaccacaagcaaaagataaagagataagagaaacaaacacac 3073867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 34254149 - 34254326
Alignment:
Q  140 aaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctaga 236  Q
    |||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || ||| |||||| | ||||||||    
T  34254149 aaaaacacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataac-agcacctaga 34254247  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  34254248 tctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 34254326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 1746018 - 1746214
Alignment:
Q  122 tgttgtgaatt-cggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||| |||  |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||| || ||    
T  1746018 tgttgtgaatttcggtctcaaaatcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataacaaagtgaacacaagcaataatca 1746117  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | |||||||||||||||||||||||||||| |||||| | ||||||||||||||| ||||    |||||  |||||||||||||||||||    
T  1746118 acaataac-agcacctagatctaatctaggaatcaaagtcaaaagcgc-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 1746214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 3050925 - 3051090
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagcaacaac 216  Q
    ||||||||||| ||| |||||  |||||||||||||| ||||||||||||| |||| |||||||||||||  ||||    ||| || |||||||||||||    
T  3050925 tgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 3051024  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaaga 283  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  3051025 aataataac-aacacctagatctaatctagaaattaaagtgaaaagctcaaaaccacaagcataaga 3051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 34256325 - 34256502
Alignment:
Q  140 aaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctaga 236  Q
    |||| ||||||||||  || ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| || ||| |||||| | ||||||||    
T  34256325 aaaaacacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagcacaagcaataatcaacaataac-agcacctaga 34256423  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  34256424 tctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 34256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 121 - 310
Target Start/End: Original strand, 8965491 - 8965685
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||||||||| | |||||||||||||||||||  ||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||||||     
T  8965491 ctgttgtgaattcgaactcaaaatcacaccaataaaactatgatgcgtggagcaa-ggaacgtagtaaccaatatcaaagtaaccacaagcaacaacaac 8965589  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtg--------aaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacacc 310  Q
    ||||||||  |||||||| ||||||||||||| |||||        ||||   ||||||||||| |||||||||||||||| | |||||||||||||||    
T  8965590 aataacaa--acctagatttaatctaggaatc-aagtgaaaaaaaaaaaaaaacaaaaccacaaacaaaagataaagagagaaaagaaacaaacacacc 8965685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 19945158 - 19945354
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | |||||||||||||||||  || | |||||||||||||||||||||||||||||||||| |||||| ||  ||||||| || ||    
T  19945158 tgttgtgaattccggtctcaaaatcacaccaatacaaactttgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 19945257  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | ||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||    |||||  |||||||||||||||||||    
T  19945258 acaataac-agcacctagatctaatctaggaatcgaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 19945354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 308
Target Start/End: Original strand, 32901989 - 32902175
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaagga-aagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||||||| ||||||||| ||||||||| |  ||||||||||||||| || |||||||||| |||||||||| || | ||| ||||||||| |    
T  32901989 tgttgtgaattcggactcaaaatcagaccaataaacttagatgtgtggagcaaaagagaagtagtaactaatatcaaagcaacctcaaacaacaacaaca 32902088  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagat-aaagag-agtagagaaacaaacaca 308  Q
    | |||||  |||||||||||||||||||| | ||||||||| | |||||||| ||||||||||| |||||| || |||||||||||||||    
T  32902089 acaacaa--acctagatctaatctaggaa-ccaagtgaaaaacacaaaaccaaaagcaaaagataaaagagaagaagagaaacaaacaca 32902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 29796126 - 29796316
Alignment:
Q  117 tattctgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaac 216  Q
    ||||||||||||||||| || |||| |||||||||||||||| |||||||||||||||| | ||||| |||||| ||||||||||  | | |||||||||    
T  29796126 tattctgttgtgaattcagactcaacatcacaccaataaattttgatgtgtggagcaaaaggaagtaataaccagtatcaaagtattctcgagcaacaac 29796225  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||||   | ||||| |||||||| |||  ||||| ||||| ||||| || |||||||||||||| |||| ||| |||| ||||||||||    
T  29796226 aataataacaa--tcttagatttaatctagtaat-taagtgtaaagcacaaaatcataagcaaaagataaa-agagaagataaac-aacacaccaa 29796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 141 - 312
Target Start/End: Complemental strand, 31218606 - 31218430
Alignment:
Q  141 aaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagat 237  Q
    ||||||||||||||  || ||||||||||||||||||||||||||| |||||||| |||||| ||  ||||||| || ||| |||||| | |||||||||    
T  31218606 aaatcacaccaatataaactatgatgtgtggagcaaaggaaagtagcaaccaataacaaagtgaatgcaagcaataatcaacaataac-agcacctagat 31218508  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    |||||||||||| ||||||||||||| ||||| || ||||| |||||||    |||||  |||||||||||||||||||    
T  31218507 ctaatctaggaaacaaagtgaaaagcacaaaa-cataagcacaagataaaaggagagaagagagaaacaaacacaccaa 31218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 11711804 - 11711972
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagc-aaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||||||||||| ||||||| ||||||||||| |  |||||||||||| ||||||||||||||||||| || ||||||| | |||| ||||||||     
T  11711804 ctgttgtgaattcggactcaaaattacaccaataaacttagatgtgtggagcaaaaggaaagtagtaaccaagataaaagtaacctcaagaaacaacaac 11711903  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag 292  Q
    ||| ||||  ||||||||||||| ||||||| | |||| |||||  |||||||||| |||| |||||||||||    
T  11711904 aat-acaa--acctagatctaatataggaat-agagtgtaaagcataaaaccacaaacaaaggataaagagag 11711972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 30291865 - 30291780
Alignment:
Q  227 aacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||| ||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30291865 aacatctaaatctaatctagtaatcaaagtggaaagttcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 30291780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 4162832 - 4162692
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaatta-tgatgtgtggagcaaaggaaagtagtaaccaat----atcaaagtaaacacaagcaacaac 216  Q
    ||||||||||||||| ||||||||| |||| ||||  | ||||||| ||||||||| ||| | |||||||||    |||||||||| ||||| |||||||    
T  4162832 tgttgtgaattcggactcaaaatcataccagtaaaacaatgatgtgaggagcaaagaaaaatggtaaccaattaatatcaaagtaatcacaaacaacaac 4162733  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaa 261  Q
    |||||||| |    |||||||||||||||||||||||||||||||    
T  4162732 aataataaaa----cctagatctaatctaggaatcaaagtgaaaa 4162692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 2628110 - 2627941
Alignment:
Q  120 tctgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa- 215  Q
    |||||||||||||| ||| || ||| ||||||||||  || || |||||||||||||||||||||||||||||| || ||||||     ||||||| ||     
T  2628110 tctgttgtgaattccgatctcgaaaccacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaacaaagtgggtgcaagcaaaaaa 2628011  T
Q  216 -caataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     ||| |||||| ||||||||||||||||||||||| | |||||||||||  |||| |||||||| ||||||||    
T  2628010 tcaacaataac-aacacctagatctaatctaggaaac-aagtgaaaagcataaaa-cacaagcacaagataaa 2627941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 7493352 - 7493284
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaat 192  Q
    |||||||||||||||  ||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||    
T  7493352 tgttgtgaattcgga--caaaatcacaccaataaaactatgatgtgtggagcaaagg-aagtagtaatcaat 7493284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 302
Target Start/End: Complemental strand, 7597909 - 7597798
Alignment:
Q  188 ccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    ||||||||||||||| |  |||||||| ||| ||||||||||   |||||||||| |||||| ||| ||| ||| | |||||| | || |||||||||||    
T  7597909 ccaatatcaaagtaacctgaagcaacaccaacaataacaaact--tagatctaatttaggaaccaa-gtgtaaaacacaaaacgataaacaaaagataaa 7597813  T
Q  288 gagagtagagaaaca 302  Q
    ||||| |||||||||    
T  7597812 gagagaagagaaaca 7597798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 291
Target Start/End: Original strand, 3231646 - 3231821
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaattatgatgtgtggagcaaag-gaaagtagtaaccaatatcaaagtaaacac-----aagcaaca 214  Q
    ||||||||||||||| || ||  ||||||||||||| |  ||||||||||| |||  |||||||||||| ||||||||||||| | |     || |||||    
T  3231646 tgttgtgaattcggactctaatctcacaccaataaacttggatgtgtggagtaaaatgaaagtagtaactaatatcaaagtaacctcaaacaaaccaaca 3231745  T
Q  215 acaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctc--aaaaccacaagcaaaagataaagaga 291  Q
    |||| ||||||||  | |||||| |||||| |||||| ||||| ||| | |  ||||||| ||||||||||||||||||    
T  3231746 acaacaataacaa--atctagatataatcttggaatc-aagtgtaaaacacaaaaaaccataagcaaaagataaagaga 3231821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 29196189 - 29196382
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaaca 217  Q
    ||||||||||||||| |||||  |||||||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  29196189 tgttgtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaaca 29196288  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29196289 ataataacaa-cacctagatctaatctggtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 29196382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 9666270 - 9666462
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaa 218  Q
    ||||||||||||||| |||||||||||||||||  || |||||| ||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||    
T  9666270 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatctgtggagcaaaggaaagtagtaaccaatatcaaagcaaataacaagcaactacaa 9666369  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9666370 taataacaa-cacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagataagagaaacaaacacaccaa 9666462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 122 - 309
Target Start/End: Original strand, 44700284 - 44700472
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||| |||||||||| |||||||||||||||||  || |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44700284 tgttttgaattcggactcaaaatcacaccaatacaaactatgatgcatggagcaaagaaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 44700383  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacac 309  Q
    |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  44700384 aataacaa-cacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaggataaagagagaagagaaacaaacacac 44700472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 31314808 - 31314617
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||||| | || |||||||||||||||||  || |||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  31314808 tgttgtgaataccgactcaaaatcacaccaatacaaactatgatgtatggagcaaaggaaagtaataactaatattaaagtaaacacaagcaacaacaat 31314709  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31314708 aataacaa-cacctaaatataatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 31314617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 22834807 - 22834999
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||     
T  22834807 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaggtaataacaac 22834906  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaa-caaacacaccaa 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  || |||||||  |||||||||||    
T  22834907 aataacaa-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaggaagaagagaaagaaaacacaccaa 22834999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 27305519 - 27305709
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataa 221  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||    
T  27305519 tgttgtgaattcggactcaaaatcacaccaataaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaacaacaagcaacaacaacaa 27305618  T
Q  222 taacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||| |  ||||||||||||||||||| | |||||||||| | ||||||||||| ||||||||||| |||| |||||||||||||||| |||||    
T  27305619 taacca--acctagatctaatctaggagt-aaagtgaaaaacacaaaaccacaaacaaaagataaatagagaagagaaacaaacacacaaagaa 27305709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 121 - 315
Target Start/End: Original strand, 21350810 - 21351002
Alignment:
Q  121 ctgttgtgaattcggattcaaaa-tcacaccaat-aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||||||||||||| |||||| |||||||||| |||| | |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21350810 ctgttgtgaattcggactcaaaactcacaccaatgaaataaagatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtaaacacaaacaacaacaa 21350909  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||| ||||    | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  21350910 taacaaca----cttagatctaatctaggaatcaaagtgaaaagctcataaccacaagcataagataaagtgagaagagaaacaaacacaccaagaa 21351002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 761211 - 761019
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| ||||| |||||||||||  || |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||     
T  761211 tgttgtgaattcggactcaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaactcaagcaataacaac 761113  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  761112 aatagcag-cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 761019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 32891458 - 32891273
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat-aaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    |||||||| |||||| |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  32891458 tgttgtgacttcggactcaaaactcacaccaatgaaactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtaaacacaagcaacaacaa- 32891360  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
             |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  32891359 ---------cacctagatctaatataggaatcaaagtgaaaaactcaaaaccacaagcaaaagataaggagagaagagaaacaaacacaccaagaa 32891273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 23391712 - 23391905
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||||||||||| |  ||||| |||||||||||  || |||||||||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||    
T  23391712 tgttgtgaattcgaacacaaaactcacaccaatacaaactatgatgtgtggagaaaaggaaagtaataaccaatatcaaagtgaacacaagaaacaacaa 23391811  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtg-aaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||| |||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  23391812 taataac-aacacctagatctaatctagtaatcaaagtgaaaaaacacaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 23391905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 51351941 - 51352132
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaataa-attatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||||||| ||||||||||| |||||| | || |||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||| |    
T  51351941 tgttgtgaattcggactcaaaatcacatcaataatactacgatgtgtggagcaaaggaaagtggtaaccaatatcaaagtaatcacaagcagcagcaaca 51352040  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||||  ||||||||||||||||||||||||| |||||| | |||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  51352041 ataacaa--acctagatctaatctaggaatcaaa-tgaaaaacacaaaaccacaagtaaaagataaagagagaagagaaacaaacacatcaagaa 51352132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 122 - 304
Target Start/End: Original strand, 39153164 - 39153348
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    ||||| ||||||||  |||||| |||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||    
T  39153164 tgttgagaattcgggctcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaacacaagcggcagcaa 39153263  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaa 304  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  39153264 taataacaa-cacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaagggagaagagaaacaaa 39153348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 2074880 - 2075074
Alignment:
Q  119 ttctgttgtgaattcggattcaaaatcacaccaataaat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    ||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |    
T  2074880 ttctgttgtgaattcggacccaaaatcacaccaataaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaaataaccacaagcaacaata 2074979  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    | ||||| ||  ||| |||| ||||||||||| | ||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  2074980 acaataataa--acccagatttaatctaggaaac-aagtgaaaaacacaaaaccacaagcaaaagataaagagagaagagaaataaacacacccagaa 2075074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 40735750 - 40735582
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||    
T  40735750 tgttgtgaattcggtatcaaaatcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatcaa 40735651  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
     |||||| | |||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||    
T  40735650 caataac-agcacctagatctaatataggaaccaaagtgaaaagcacaaatccacaagcaaaagataaag 40735582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 29811237 - 29811040
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||| | |||||| |||||||||||  || |||||| |||||||||||||||||||||||||||| ||||||  ||||||||||| || ||    
T  29811237 tgttgtgaattcgaactcaaaactcacaccaatacaaaatatgatttgtggagcaaaggaaagtagtaaccaatttcaaagagaacacaagcaataatca 29811138  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
    | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  29811137 acaataacag-cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagatgaacaaacacaccaa 29811040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 29813430 - 29813239
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    ||||||||||||||| |||||| |||||||||||  || ||||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||| || ||    
T  29813430 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaactaatatcaaagtgaacacaaacaataatca 29813331  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagaga--aacaaacaca 308  Q
    | |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||  ||||||||||    
T  29813330 acaataacag-cacctagatctaatctaagaatcaaagtgaaaagctcaaaaccacaaccaaaagataaagggagaagagaggaacaaacaca 29813239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 40734865 - 40734697
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||  |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||  ||    
T  40734865 tgttgtgaattcggtctcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagaaataataaa 40734766  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
     |||||| | ||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  40734765 aaataac-agcacctagatctaatctaggaatcaaagtgcaaagcacaaatccacaagcaaaagataaag 40734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 23410131 - 23410325
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaa 218  Q
    |||||||||||||||  ||||| ||||| |||||  || ||||||||||||| |||||||||||||||||  |||||||||| |||||||||||||| ||    
T  23410131 tgttgtgaattcggacacaaaactcacatcaatacaaactatgatgtgtggatcaaaggaaagtagtaacatatatcaaagtgaacacaagcaacaaaaa 23410230  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagt--gaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    || |||| |||||||||||||||||||| |||||||||   |||| |||||||||||||||||||||||||||||| | | |||||||||||||||    
T  23410231 tattaac-aacacctagatctaatctagtaatcaaagtaaaaaaaactcaaaaccacaagcaaaagataaagagagaatataaacaaacacaccaa 23410325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 7762596 - 7762467
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| || || ||| |||||||| |||||||||||||| |||||||||||||    
T  7762596 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagtaataatcaacaataacaa-cacctagatctaatttaggaatcaaagt 7762498  T
Q  257 gaaaagctcaaaaccacaagcaaaagataaa 287  Q
    ||||||| |||||||||||||||||||||||    
T  7762497 gaaaagcacaaaaccacaagcaaaagataaa 7762467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 19683687 - 19683884
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||| |||||||||||  || |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||    
T  19683687 tgttgtgaattccggtctcaaactcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 19683786  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||    |||||  |||||||||||||||||||    
T  19683787 acaataac-agcacctagatctaatctaggaataaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 19683884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 5236257 - 5236453
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||||||| | ||||||||||||| | |||||||||| ||||||||||| || |||    
T  5236257 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagtacaggaaagtagtaatcgatatcaaagtgaacacaagcaataatcaa 5236356  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||  | | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  5236357 caataa-gagctcctagatctaatctaggaatcaaagtgaaaagcacaaatccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 5236453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 51399182 - 51398986
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    ||||||||||||||| ||||||||| |||||||  || |||||||| |||||||||||||||||| || |||||||||||| | ||| ||||| || |||    
T  51399182 tgttgtgaattcggactcaaaatcataccaatacaaactatgatgtatggagcaaaggaaagtagaaaacaatatcaaagtgagcactagcaataatcaa 51399083  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  51399082 caataacag-cacctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 51398986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 9581652 - 9581483
Alignment:
Q  122 tgttgtgaattc-ggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| ||| |||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| || ||    
T  9581652 tgttgtgaattccggactcaaaatcacaccaatataaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatca 9581553  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    | |||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||    
T  9581552 acaataac-agcacctagatctaatctatgaatcaaagtgaaaagcacaaaaccacaagcacaaaataaag 9581483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 7764834 - 7764637
Alignment:
Q  122 tgttgtgaattc-ggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| ||| ||||||  |||||||||  || ||||||||||| || |||||||||||||||||||||||||||| ||||||||||| || ||    
T  7764834 tgttgtgaattccggactcaaaactacaccaatacaaactatgatgtgtgaagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 7764735  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||||  |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||    |||||  |||||||||||||||||||    
T  7764734 acaataacag-cacctagatctaatcttggaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaa 7764637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 140 - 312
Target Start/End: Complemental strand, 29682706 - 29682531
Alignment:
Q  140 aaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagat 237  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||| ||| || ||||| || |||||||| ||||| |||| ||  |||||||||    
T  29682706 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaatcaaaattaaagtgaatacaagcaataacaacaatagcag-cacctagat 29682608  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagagaaacaaacacaccaa 312  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||  ||||  ||||||||| |||||||||    
T  29682607 ctaacctaggaatcaaagtgaaaaactcaaaaccacaagcaaaagataaagggagaagagagaaacatacacaccaa 29682531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 121 - 312
Target Start/End: Complemental strand, 37408828 - 37408631
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||||||  ||||| ||||| |||||  || ||||||||||||||||||||||||||||||||||||| ||||| | ||||| ||| || ||    
T  37408828 ctgttgtgaattcggcctcaaagtcacatcaatacaaaatatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagcacaaacaataatca 37408729  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||||  ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||    |||||  |||||||||||||||||||    
T  37408728 acaataacag-cacctagatctaatctaggaatcaaagtgaaaagcactaaatcacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 37408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 314
Target Start/End: Original strand, 9635923 - 9636122
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||    
T  9635923 tgttgtgaattccggtctcaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatca 9636022  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa---gagag--tagagaaacaaacacaccaa 312  Q
    | |||||| | |||||||||||||||||||||||||||||||||||   ||| |||||||| ||||||||   |||||   |||||||||||||||||||    
T  9636023 acaataac-agcacctagatctaatctaggaatcaaagtgaaaagc-ataaatcacaagcacaagataaaagggagagcagagagaaacaaacacaccaa 9636120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 133 - 312
Target Start/End: Complemental strand, 16499371 - 16499201
Alignment:
Q  133 cggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaaca 230  Q
    |||| ||||||||||| |||||  || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||          ||    
T  16499371 cggactcaaaatcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagtaaacacaagcaataacaa----------ca 16499282  T
Q  231 cctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||| ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16499281 cctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaagagagaagagaaacaaatacaccaa 16499201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 5257943 - 5258139
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||| |||||||||||  || |||||||||||||||||||||||||||||||||||| |||||| ||  ||||||| || ||    
T  5257943 tgttgtgaattccggtctcaaagtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatca 5258042  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    | |||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    |||||  |||||||||||||||||||    
T  5258043 acaataac-agcacctagatctaatctaggaatcaaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 5258139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 9634618 - 9634764
Alignment:
Q  119 ttctgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa 215  Q
    ||||||||||||||| | | |||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  9634618 ttctgttgtgaattccggtctcaaaatcacaccaatacaaactatgat-tgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataa 9634716  T
Q  216 -caataataacaaacacctagatctaatctaggaatcaaagtgaaaagc 263  Q
     ||| |||||| | |||||||||||||||||||||||||||||||||||    
T  9634717 tcaacaataac-agcacctagatctaatctaggaatcaaagtgaaaagc 9634764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 5260161 - 5260318
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagt 256  Q
    |||||||||||||||||||||||||||||||||||| |||||| |   ||||||| || ||| |||||| |||||||||||||||| |||||||||||||    
T  5260161 tatgatgtgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaacaataac-aacacctagatctaatttaggaatcaaagt 5260259  T
Q  257 gaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||| | ||||||||||||||| ||||    |||||  |||||||||||||||||||    
T  5260260 gaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 5260318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 53921413 - 53921502
Alignment:
Q  226 aaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||    
T  53921413 aaacatcttgatctaatctaggaatcaaagtgaaaagctcaaaaccacaaacaaaatataaagagagaagagaaacaaacacactaagaa 53921502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 30224954 - 30224855
Alignment:
Q  17 aaataagtctcatcaagctagaacgacatgaaaattttcattttcatttggaagaaaa-ttatctatatagagcgagaaataatctaaatcatactctag 115  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |  ||||||| ||||||||||||||    
T  30224954 aaataagtctcatcaatctggaacgacatgaaaattttcattttcatttggaagaaaatttatctagatagagcaaataataatcaaaatcatactctag 30224855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 287
Target Start/End: Complemental strand, 45095531 - 45095365
Alignment:
Q  121 ctgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||||  || |||||||||| |||||  || |||||||||| |||||||||||||||||||||||||||||||| | ||||||||| || ||    
T  45095531 ctgttgtgaattct-atacaaaatcacatcaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatca 45095433  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
    | |||||| | ||| ||||||||||||| ||||||||| | ||| | | |||||||||||||||||||||    
T  45095432 acaataac-agcacatagatctaatctatgaatcaaagagtaaaacac-aaaccacaagcaaaagataaa 45095365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 23199938 - 23200102
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| | | ||||| ||||||||||  || |||||| ||||||||||||||||||||||||||||| |||||| |   ||||||| || |||    
T  23199938 tgttgtgaattccg-tacaaaaccacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaataacaaagtgagtgcaagcaataatcaa 23200036  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     ||||  |||||||||||||||||||||||| |||| |||||| | | |||||||||||| ||||||||    
T  23200037 caata--aaacacctagatctaatctaggaaacaaaatgaaaaacac-aaaccacaagcataagataaa 23200102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 32744295 - 32744432
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtg 257  Q
    |||||||| ||||||||  |||||||||||||||| |||||         |||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  32744295 tatgatgtatggagcaatagaaagtagtaaccaatttcaaa---------agcaacaacaatgataacaa-cacctagatctaatctagaaatcaaagtg 32744384  T
Q  258 aaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |       ||||||||||||||||||||||||||   ||||||||||||||||||    
T  32744385 a-------aaaaccacaagcaaaagataaagagatatgagaaacaaacacaccaa 32744432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 37407057 - 37406981
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatca 196  Q
    ||||||||||||||  ||||| |||||||| ||  || |||||||||||||||||||||||||||||||||||||||    
T  37407057 tgttgtgaattcggcctcaaagtcacaccactacaaaatatgatgtgtggagcaaaggaaagtagtaaccaatatca 37406981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 23197745 - 23197903
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| | | ||||| ||||||||||  || |||||| |||||||||||||||||||||||||||||  ||||      ||||||| || |||    
T  23197745 tgttgtgaattccg-tacaaaaccacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaataataaag------caagcaataatcaa 23197837  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     ||||  |||||| ||||||||||||||||| |||| |||||| | | |||||||||||| ||||||||    
T  23197838 caata--aaacacatagatctaatctaggaaacaaaatgaaaaacac-aaaccacaagcacaagataaa 23197903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 30231900 - 30231833
Alignment:
Q  48 aaattttcattttcatttggaagaaaattatctatatagagcgagaaataatctaaatcatactctag 115  Q
    |||||| ||||||||||||||||||||||||||| ||||| | |  ||||||| ||||||||||||||    
T  30231900 aaatttccattttcatttggaagaaaattatctagatagatcaaataataatcaaaatcatactctag 30231833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 316
Target Start/End: Complemental strand, 2020480 - 2020328
Alignment:
Q  161 gatgtgtggagcaaag--gaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtga 258  Q
    |||||||||||||||   ||||||||||||| |||||||||||  | | ||||||||||||||  |     | |||||| ||||||||||| |||    |    
T  2020480 gatgtgtggagcaaaaatgaaagtagtaaccgatatcaaagtagcctcgagcaacaacaataacca-----atctagatttaatctaggaaccaagtata 2020386  T
Q  259 aaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaat 316  Q
    ||||| ||||| |||||||| ||||||||||||| |  ||||||||||||| ||||||    
T  2020385 aaagcgcaaaatcacaagcagaagataaagagagaattgaaacaaacacactaagaat 2020328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 53921333 - 53921413
Alignment:
Q  123 gttgtgaattcggattcaaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaa 203  Q
    ||||||||||| |||||||||||||||||||||    |||||| ||||||||| |||| || |||| ||||| ||||||||    
T  53921333 gttgtgaattcagattcaaaatcacaccaataatacttgatgtttggagcaaaagaaaataataactaatattaaagtaaa 53921413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 801436 - 801388
Alignment:
Q  144 tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaacca 190  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||    
T  801436 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca 801388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 1312882 - 1312986
Alignment:
Q  141 aaatcacaccaataaa-ttatgatgtgtggagcaaa-ggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagatc 238  Q
    |||||||||||||||| |||| | | |||||||||| || ||||||| ||||||||||||||||   ||| ||||||| ||||||||||  || ||||||    
T  1312882 aaatcacaccaataaacttat-acgcgtggagcaaaagggaagtagtgaccaatatcaaagtaacatcaaacaacaacgataataacaa--acttagatc 1312978  T
Q  239 taatctag 246  Q
    ||||||||    
T  1312979 taatctag 1312986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 33192081 - 33192003
Alignment:
Q  233 tagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |||||||||| |||||| ||  ||| ||||| ||||||||||| |||||||||||  ||| | |||||||||||||||||    
T  33192081 tagatctaatgtaggaaccag-gtgtaaagcacaaaaccacaaacaaaagataaatcgagaaaagaaacaaacacaccaa 33192003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 14521478 - 14521676
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat-aaattatgatgtgtggagcaaaggaaagta----gtaaccaatatcaaagtaaacacaagcaacaa 215  Q
    ||||||||||||||| |||||| |||||||||| ||| ||||||||||||||||||| ||||||    ||||||||| ||||||||||||||||||||||    
T  14521478 tgttgtgaattcggactcaaaactcacaccaatgaaactatgatgtgtggagcaaagaaaagtacgtagtaaccaatttcaaagtaaacacaagcaacaa 14521577  T
Q  216 caataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| | ||||| ||||||||||||||    
T  14521578 caataacaacaa-cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcataagataaagtgagaaaagaaataaacacaccaagaa 14521676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 3038729 - 3038919
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaaca-caagcaacaacaata 220  Q
    ||||||||||| | ||||||||| |||||||  || |||||||||| ||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||    
T  3038729 ttgtgaattcgaactcaaaatcagaccaatacaaactatgatgtgtcgagcaaaggaaagtaataaccaatatcaaagcaaacaacaagtaacaacaata 3038828  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    ||||||| |||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  3038829 ataacaa-cacctagatctaatatagtaatcaaagtgaaaagttcaaaaccacaagcaaaagataaagagagaaaagaaacaaacacaccaa 3038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 16569389 - 16569194
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata---aattatgatgtgtggagcaaa-ggaaagtagtaaccaatatcaaagtaaacacaagcaacaaca 217  Q
    ||||||||||||||| |||||||||||||||||   || |||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||| ||||    
T  16569389 tgttgtgaattcggactcaaaatcacaccaatattcaactatgatgtgtggagcaaaaggaaagtagtaaccaaaatcaaagtgaactcaagcaataaca 16569290  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagag--tagagaaacaaacacaccaa 312  Q
    | |||| ||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  16569289 acaatagcag-cacctagatctaatctagaaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 16569194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 122 - 304
Target Start/End: Original strand, 26954091 - 26954274
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||||||||||| |||||||||||||||| |||||||||||| ||| || |||||     
T  26954091 tgttgtgaattcggactcaaaatcacaccaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatttcaaagtaaacataagaaataacaac 26954190  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaa 304  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||| |||||||||||    
T  26954191 aataacag-cacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagaaaaatgtaaagagagaagagaaacaaa 26954274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 28137211 - 28137378
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaat 219  Q
    ||||||||||||||  |||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |     
T  28137211 tgttgtgaattcggtctcaaaatcacaccaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacgac 28137310  T
Q  220 aataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 288  Q
    |||||| ||||| |||||||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  28137311 aataac-aacacatagatctaatataggaatcaaagtgaaaagcacataaccacaagcaaaagataaag 28137378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 33160169 - 33160347
Alignment:
Q  140 aaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaaacacctagat 237  Q
    ||||||| |||||||  || ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||    
T  33160169 aaaatcataccaatacaaactatgatgtgtggagcaaaggaaaatagtaaccaatttcaaagtaaatacaagcaacaacaatattaac-aacacctagat 33160267  T
Q  238 ctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa-----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||     |||||  |||||||||||||||||||    
T  33160268 ctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaaggagagaagagagaaacaaacacaccaa 33160347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 158 - 288
Target Start/End: Original strand, 9182869 - 9182999
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatctaatctaggaatcaaagt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||    
T  9182869 tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaa-cacctagatctaatctaggaatcaaagt 9182967  T
Q  257 gaaaagctcaaaaccacaagcaaaagataaag 288  Q
    ||||||  ||||||||||||||||||||||||    
T  9182968 gaaaagtacaaaaccacaagcaaaagataaag 9182999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 312
Target Start/End: Original strand, 5408886 - 5409065
Alignment:
Q  138 tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacaccta 234  Q
    ||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || ||| |||||| ||||||||    
T  5408886 tcaaagtcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataac-aacaccta 5408984  T
Q  235 gatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  5408985 gatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 5409065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 312
Target Start/End: Original strand, 5413211 - 5413390
Alignment:
Q  138 tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacaccta 234  Q
    ||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || ||| |||||| ||||||||    
T  5413211 tcaaagtcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataac-aacaccta 5413309  T
Q  235 gatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  5413310 gatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 5413390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 33211060 - 33211181
Alignment:
Q  190 aatatcaaagtaaacacaagcaacaacaataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaaga 289  Q
    ||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  33211060 aatattaaagtaaacacaagcaataacaacaataataa-cacctagatctaatctaggaatcaaagtgaaaatcacaaaaccacaagcaaaagataaaga 33211158  T
Q  290 gagtagagaaacaaacacaccaa 312  Q
    ||| ||||||||||||| |||||    
T  33211159 gagaagagaaacaaacataccaa 33211181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 16452127 - 16452288
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| ||| |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||| |||||| || |||||||| || ||    
T  16452127 tgttgtgaattccgatctcaaaatcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataacaaagtgaatacaagcaataatca 16452226  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaa 281  Q
    | |||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  16452227 acaataac-atcacctagatctaatctaggaatcaaagtgaaaagcac-aaaccacaagcaaaa 16452288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 140 - 312
Target Start/End: Original strand, 31404493 - 31404670
Alignment:
Q  140 aaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctaga 236  Q
    |||||||| ||||||  || ||||||||||||||||||||||| |||||| |||||||||||| | ||||||||| || ||| |||||| | ||||||||    
T  31404493 aaaatcactccaatacgaactatgatgtgtggagcaaaggaaaatagtaatcaatatcaaagtgagcacaagcaataatcaacaataac-agcacctaga 31404591  T
Q  237 tctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||||||||    |||||  |||||||||||||||||||    
T  31404592 tctaatctaggaatcaaagaggaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 31404670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 312
Target Start/End: Original strand, 30834332 - 30834531
Alignment:
Q  121 ctgttgtgaatt-cggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-c 216  Q
    |||||||||||| |||  |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||| ||  ||||||| || |    
T  30834332 ctgttgtgaatttcggtctcaaaatcacaccaatacgaaatatgatgtgtggagcaaaggaaaatagtaaccaataacaaagtgaatgcaagcaataatc 30834431  T
Q  217 aataataacaaacacctagatctaatctaggaatcaaagtgaaaagctca-aaaccacaagcaaaagataaa--gagagtagag--aaacaaacacacca 311  Q
    || |||||| | ||||||||||||||||| |||||||||||||||   || ||||||||||||||| |||||  ||||| ||||  ||||||||||||||    
T  30834432 aacaataac-agcacctagatctaatctatgaatcaaagtgaaaaaaacacaaaccacaagcaaaatataaaaggagagaagagataaacaaacacacca 30834530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 312
Target Start/End: Original strand, 5406025 - 5406195
Alignment:
Q  144 tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatcta 240  Q
    |||||||||||  || |||||||||||||| |||| ||||||||||||||||| ||||| | ||||||||| || |||||||    | ||||||||||||    
T  5406025 tcacaccaatacaaactatgatgtgtggagtaaagaaaagtagtaaccaatattaaagtgagcacaagcaataatcaataat----agcacctagatcta 5406120  T
Q  241 atctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||| ||||||| | ||||||||| ||||||||||    |||||  |||||||||||||||||||    
T  5406121 atctaggaatcaaagagaaaagcac-aaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaa 5406195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 312
Target Start/End: Original strand, 5410350 - 5410520
Alignment:
Q  144 tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacacctagatcta 240  Q
    |||||||||||  || |||||||||||||| |||| ||||||||||||||||| ||||| | ||||||||| || |||||||    | ||||||||||||    
T  5410350 tcacaccaatacaaactatgatgtgtggagtaaagaaaagtagtaaccaatattaaagtgagcacaagcaataatcaataat----agcacctagatcta 5410445  T
Q  241 atctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagtagagaaacaaacacaccaa 312  Q
    ||||||||||||||| ||||||| | ||||||||| ||||||||||    |||||  |||||||||||||||||||    
T  5410446 atctaggaatcaaagagaaaagcac-aaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaa 5410520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 315
Target Start/End: Complemental strand, 4045773 - 4045587
Alignment:
Q  124 ttgtgaattcggattcaaaat-cacaccaataaa-ttatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataa 221  Q
    ||||||||| ||| ||||||| |||||||||||  |||| ||||||| ||  || ||||||||||||||||||||||||||   ||| ||| |||| ||     
T  4045773 ttgtgaatttggactcaaaattcacaccaataatcttat-atgtgtgaagttaaagaaagtagtaaccaatatcaaagtaacttcaaacaataacactag 4045675  T
Q  222 taacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
     ||     |||||||||||||||| ||||||| |||||||   ||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  4045674 caa-----acctagatctaatctaagaatcaa-gtgaaaaaaacaaaaccacgagtaaaagataaagagagaagagaaacaaacacaccaagaa 4045587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 2171326 - 2171468
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||| |||||||||||  || ||||||||||||||||||||||||||||||||| || ||||||     ||||||| || ||    
T  2171326 tgttgtgaattccggtctcaaagtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccactaacaaagtgtgtgcaagcaataatca 2171425  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaa 261  Q
    | |||||| | |||||||||||||||||||||||||||||||||    
T  2171426 acaataac-agcacctagatctaatctaggaatcaaagtgaaaa 2171468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 257245 - 257308
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata-aattatgatgtgtggagcaaaggaaagtag 184  Q
    ||||||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  257245 tgttgtgaattcgaactcaaaatcacaccaatataattataatgtgtggagcaaaggaaagtag 257308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 3072579 - 3072637
Alignment:
Q  144 tcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 200  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||| || ||||||    
T  3072579 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaacaaagt 3072637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 412419 - 412387
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaacca 190  Q
    |||||||||||||||||||||||||||||||||    
T  412419 tatgatgtgtggagcaaaggaaagtagtaacca 412387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 9182828 - 9182863
Alignment:
Q  158 tatgatgtgtggagcaaaggaaagtagtaaccaata 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  9182828 tatgatgtgtggagtaaaggaaagtagtaaccaata 9182863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 6097286 - 6097327
Alignment:
Q  159 atgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 200  Q
    |||||||||||||||| ||||||||||||||| || ||||||    
T  6097286 atgatgtgtggagcaacggaaagtagtaaccactaacaaagt 6097327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 315
Target Start/End: Original strand, 12221018 - 12221103
Alignment:
Q  230 acctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaagaa 315  Q
    ||||| |||||||||| ||| |||  | | |||| |||||| ||| |||||||||||||| |  ||||||| ||||||||||||||    
T  12221018 acctaaatctaatctacgaaccaagcttagaagcacaaaactacacgcaaaagataaagatataagagaaataaacacaccaagaa 12221103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 602903 - 602958
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaat--aaattatgatgtgtggagcaa 174  Q
    ||||||||||||||| |||||| ||||||||||  ||| |||||||||||||||||    
T  602903 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaa 602958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 30683713 - 30683765
Alignment:
Q  140 aaaatcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaat 192  Q
    ||||||||||| |||||||  |||||||||||||||  |||||||||| ||||    
T  30683713 aaaatcacacccataaatttagatgtgtggagcaaaaaaaagtagtaatcaat 30683765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 1301 - 1494
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaata-aat-tatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt-aaacacaagcaacaaca 217  Q
    ||||||||||||| |  ||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||||| || ||||    
T  1301 tgttgtgaattcgaacacaaaactcacaccaatacaatctatgatgtgtggagcaaaggaaagtagtaatcaatattaaagttaaacacaagtaataaca 1400  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
    |  ||||||  |||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  1401 acgataacag-cacctagatctaatctaggaattaaagtgaaaaacataaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 148914 - 149093
Alignment:
Q  124 ttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataa 221  Q
    ||||||||||||| ||||||||||| |||||  || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||         
T  148914 ttgtgaattcggactcaaaatcacatcaatacaaactataatgtgtggagcaaaggaaagtagtaaccaacatcaaagtaaacacaagcaataac----- 149008  T
Q  222 taacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaa 312  Q
         |||||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  149009 -----aacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaagagagaagagaaacaaatacaccaa 149093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 20216 - 20411
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaac-aa 218  Q
    ||||||||||||||| ||||  ||| |||||||  || |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| ||  ||    
T  20216 tgttgtgaattcggactcaac-tcataccaatacaaactatgatgtgtggagcaaaggaaggtagtaaccaatgtcaaagtgaacacaagcaataattaa 20314  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagtagaga--aacaaacacaccaa 312  Q
     |||||||  ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||| |||||  ||||||||||||||    
T  20315 caataacag-cacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 20411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 139 - 287
Target Start/End: Complemental strand, 114955 - 114804
Alignment:
Q  139 caaaatcacaccaata---aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caataataacaaacaccta 234  Q
    ||||||||||||||||   || |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || ||| |||||||| ||||||    
T  114955 caaaatcacaccaatacaaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaagtgaacacaatcaataatcaacaataacaa-caccta 114857  T
Q  235 gatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     |||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  114856 tatctaatctaggaatcaaagtgaaaagcacaaaacaacaagaaaaagataaa 114804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 308
Target Start/End: Original strand, 27250 - 27433
Alignment:
Q  122 tgttgtgaattcggattcaaaa-tcacaccaataaattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaata 220  Q
    ||||||||||||||| |||||  ||||| ||||||| |  || |||||||| ||||||| |||||||||||||| ||||||| | |||||| ||| ||||    
T  27250 tgttgtgaattcggactcaaatctcacatcaataaacttagaagtgtggagaaaaggaa-gtagtaaccaatatgaaagtaacctcaagcagcaaaaata 27348  T
Q  221 ataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacaca 308  Q
    |||||||||   ||||   |||||||||||||| ||||||| | |||||||||||||||||| ||||||||| ||||||| |||||||    
T  27349 ataacaaact--tagaagaaatctaggaatcaa-gtgaaaaacacaaaaccacaagcaaaaggtaaagagagaagagaaataaacaca 27433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 434903 - 434706
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||| |||||||||||  || ||||||||||||||||||||||||||||||||| ||| |||||     ||| ||| || ||    
T  434903 tgttgtgaattccgttctcaaagtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccattattaaagtgttttcaatcaataatca 434804  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataa-----agagagtagagaaacaaacacaccaa 312  Q
    | |||||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||     |||||  |||||||||||||||||||    
T  434803 acaataacag-cacctagatctaatctaggaatcaaagtgaaaagcacaaaa-cacaagcacaagataaaagggagagaagagagaaacaaacacaccaa 434706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 1285 - 1125
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-ca 217  Q
    |||||||||||| | | ||||| |||||||||||  || ||||||||||||| ||||||| |||||||||||||  ||| || ||  ||||||| || ||    
T  1285 tgttgtgaattccggtctcaaagtcacaccaatacgaactatgatgtgtggaacaaaggatagtagtaaccaatgacaatgtgaatgcaagcaataatca 1186  T
Q  218 ataataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaa 280  Q
    | |||||||  ||||||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  1185 acaataacac-cacctagatctaatctaggtatcaaagtgaaaagcac-aaaccacaagcaaa 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 8534 - 8699
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| | | ||||| ||||||||||  || ||||||  |||||||||||||||||||||||||||  | ||||     ||||||| || |||    
T  8534 tgttgtgaattctg-tacaaaaccacaccaatacaaagtatgatacgtggagcaaaggaaagtagtaaccaatgactaagtgggtgcaagcaataatcaa 8632  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     |||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||    
T  8633 caataacaa-cacctagatctaatctaggaaacaaagtgaaaagcac-aaaccacaagcacaagataaa 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 10960 - 11125
Alignment:
Q  122 tgttgtgaattcggattcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaa-caa 218  Q
    |||||||||||| | | ||||| ||||||||||  || |||||| ||||||||||||||||||||||||||||  | ||||     ||||||| || |||    
T  10960 tgttgtgaattccg-tacaaaaccacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaatgactaagtgggtgcaagcaataatcaa 11058  T
Q  219 taataacaaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 287  Q
     |||||||| ||||||||||||||||||||| ||||||||||| | | |||||||||||| ||||||||    
T  11059 caataacaa-cacctagatctaatctaggaaacaaagtgaaaaacac-aaaccacaagcacaagataaa 11125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 11935 - 11854
Alignment:
Q  122 tgttgtgaattcggat-tcaaaatcacaccaata--aattatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagt 200  Q
    |||||||||||| | | ||||| |||||||||||  || ||||||||||||||||||||||||||||||||| || ||||||    
T  11935 tgttgtgaattccggtctcaaagtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccactaacaaagt 11854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 25295 - 25213
Alignment:
Q  230 acctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagtagagaaacaaacacaccaaga 314  Q
    ||||||||||||||||| || ||| ||| ||||| |||| ||| ||||||||||||||  ||| ||||||| ||||||| |||||    
T  25295 acctagatctaatctagtaaccaa-gtgtaaagcacaaa-ccaaaagcaaaagataaattgaggagagaaataaacacagcaaga 25213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University