View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16930_low_15 (Length: 304)

Name: NF16930_low_15
Description: NF16930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16930_low_15
NF16930_low_15
[»] chr2 (7 HSPs)
chr2 (22-294)||(13890472-13890751)
chr2 (22-294)||(14030597-14030876)
chr2 (240-273)||(13027441-13027474)
chr2 (241-273)||(17615434-17615466)
chr2 (241-273)||(27929158-27929190)
chr2 (241-273)||(37850815-37850847)
chr2 (241-273)||(42274301-42274333)
[»] chr5 (5 HSPs)
chr5 (241-277)||(3405539-3405575)
chr5 (241-273)||(41139289-41139321)
chr5 (244-273)||(21837202-21837231)
chr5 (241-273)||(4123098-4123130)
chr5 (241-273)||(4123688-4123720)
[»] chr3 (6 HSPs)
chr3 (241-273)||(40325826-40325858)
chr3 (240-273)||(34995794-34995827)
chr3 (244-273)||(53517787-53517816)
chr3 (244-273)||(54268857-54268886)
chr3 (241-273)||(42367327-42367359)
chr3 (241-273)||(45406926-45406958)
[»] chr1 (6 HSPs)
chr1 (241-273)||(2059607-2059639)
chr1 (241-273)||(2207175-2207207)
chr1 (241-273)||(10896228-10896260)
chr1 (241-273)||(13501467-13501499)
chr1 (241-273)||(28254395-28254427)
chr1 (241-273)||(43505030-43505062)
[»] chr4 (6 HSPs)
chr4 (240-270)||(54019858-54019888)
chr4 (241-273)||(3862488-3862520)
chr4 (241-273)||(3871245-3871277)
chr4 (241-273)||(18093210-18093242)
chr4 (241-273)||(26415498-26415530)
chr4 (241-273)||(39656736-39656768)
[»] scaffold0125 (1 HSPs)
scaffold0125 (244-273)||(21753-21782)
[»] chr8 (4 HSPs)
chr8 (240-273)||(6243478-6243511)
chr8 (241-274)||(34427230-34427263)
chr8 (244-273)||(41590340-41590369)
chr8 (241-273)||(36610800-36610832)
[»] chr7 (4 HSPs)
chr7 (244-273)||(1544478-1544507)
chr7 (244-273)||(37540049-37540078)
chr7 (241-273)||(18059267-18059299)
chr7 (241-273)||(36039517-36039549)
[»] scaffold1037 (1 HSPs)
scaffold1037 (241-273)||(605-637)
[»] scaffold1031 (1 HSPs)
scaffold1031 (241-273)||(723-755)
[»] scaffold0011 (1 HSPs)
scaffold0011 (241-273)||(235023-235055)
[»] chr6 (2 HSPs)
chr6 (241-273)||(12482018-12482050)
chr6 (241-273)||(16736652-16736684)


Alignment Details
Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 294
Target Start/End: Original strand, 13890472 - 13890751
Alignment:
Q  22 gcgggaacctctcaattgtattcatatacatcatattaatctaaccattcatttcatgccacttgtctctcttcttgatatattttttacaagnnnnnnn 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||  ||           
T  13890472 gcgggaacctatcaattgtattcatatacatcatattaatctaaccattcatttcatgccacttg--tctcttcttcaaatatttttta-tagaaaaatt 13890568  T
Q  122 nnnnnngtttaaatatgtttttattcc-tatggaattaacaacttttaagtttagtccttcttgtaaaatnnnnnnnngttcagtccttacnnnnnnnnc 220  Q
            |||||||| |||||| ||| ||| ||||||| |||| ||||||||||||||||||||||||         ||| |||||||||             
T  13890569 aaaaaaagttaaatatatttttagtccttatagaattaagaactattaagtttagtccttcttgtaaaaaaaaaaaaagtttagtccttacaaaaaaaat 13890668  T
Q  221 tatatgtaattttagtcc---------ataaatttgtttaattatccttaaacttttaaattataacattataaacggttcat 294  Q
    ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13890669 tatatgtaattttagtccccattaagactaaatttgtttaattatccttaaacttttaaattataacattataaaaggttcat 13890751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 294
Target Start/End: Original strand, 14030597 - 14030876
Alignment:
Q  22 gcgggaacctctcaattgtattcatatacatcatattaatctaaccattcatttcatgccacttgtctctcttcttgatatattttttacaagnnnnnnn 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||  ||           
T  14030597 gcgggaacctatcaattgtattcatatacatcatattaatctaaccattcatttcatgccacttg--tctcttcttcaaatatttttta-tagaaaaatt 14030693  T
Q  122 nnnnnngtttaaatatgtttttattcc-tatggaattaacaacttttaagtttagtccttcttgtaaaatnnnnnnnngttcagtccttacnnnnnnnnc 220  Q
            |||||||| |||||| ||| ||| ||||||| |||| ||||||||||||||||||||||||         ||| |||||||||             
T  14030694 aaaaaaagttaaatatatttttagtccttatagaattaagaactattaagtttagtccttcttgtaaaaaaaaaaaaagtttagtccttacaaaaaaaat 14030793  T
Q  221 tatatgtaattttagtcc---------ataaatttgtttaattatccttaaacttttaaattataacattataaacggttcat 294  Q
    ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14030794 tatatgtaattttagtccccattaagactaaatttgtttaattatccttaaacttttaaattataacattataaaaggttcat 14030876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 13027441 - 13027474
Alignment:
Q  240 taaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||||||||||||| |||||||    
T  13027441 taaatttgtttaattatccttaaactcttaaatt 13027474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 17615466 - 17615434
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  17615466 aaatttgtttaattatgcttaaacttttaaatt 17615434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 27929158 - 27929190
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  27929158 aaatttgtttaattatacttaaacttttaaatt 27929190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 37850847 - 37850815
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  37850847 aaatttgtttaattatgcttaaacttttaaatt 37850815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 42274301 - 42274333
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  42274301 aaatttgtttaattatccttaaactcttaaatt 42274333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 3405539 - 3405575
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaattataa 277  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3405539 aaatttgtttaattatccttaaacttttgaattataa 3405575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 41139321 - 41139289
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||||||||||||||||||||    
T  41139321 aaatttgtttaattatccttaaacttttaaatt 41139289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Complemental strand, 21837231 - 21837202
Alignment:
Q  244 tttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||||||    
T  21837231 tttgtttaattatccttaaacttttaaatt 21837202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 4123098 - 4123130
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||| |||||||||    
T  4123098 aaatttgtttaattatccttaaaattttaaatt 4123130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 4123720 - 4123688
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||||||||||||| ||||||    
T  4123720 aaatttgtttaattatccttaaacttctaaatt 4123688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 40325858 - 40325826
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||||||||||||||||||||    
T  40325858 aaatttgtttaattatccttaaacttttaaatt 40325826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 34995827 - 34995794
Alignment:
Q  240 taaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||||||||||||| |||||||    
T  34995827 taaatttgtttaattatccttaaactattaaatt 34995794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Original strand, 53517787 - 53517816
Alignment:
Q  244 tttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||||||    
T  53517787 tttgtttaattatccttaaacttttaaatt 53517816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Original strand, 54268857 - 54268886
Alignment:
Q  244 tttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||||||    
T  54268857 tttgtttaattatccttaaacttttaaatt 54268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 42367327 - 42367359
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  42367327 aaatttgtttaattatgcttaaacttttaaatt 42367359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 45406958 - 45406926
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  45406958 aaatttgtttaattatccttaaactcttaaatt 45406926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 2059639 - 2059607
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||||||||||||||||||||    
T  2059639 aaatttgtttaattatccttaaacttttaaatt 2059607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 2207175 - 2207207
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  2207175 aaatttgtttaattatacttaaacttttaaatt 2207207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 10896260 - 10896228
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  10896260 aaatttgtttaattatgcttaaacttttaaatt 10896228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 13501499 - 13501467
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  13501499 aaatttgtttaattatccttaaactcttaaatt 13501467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 28254427 - 28254395
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  28254427 aaatttgtttaattatgcttaaacttttaaatt 28254395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 43505062 - 43505030
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  43505062 aaatttgtttaattatccttaaactcttaaatt 43505030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 270
Target Start/End: Complemental strand, 54019888 - 54019858
Alignment:
Q  240 taaatttgtttaattatccttaaacttttaa 270  Q
    |||||||||||||||||||||||||||||||    
T  54019888 taaatttgtttaattatccttaaacttttaa 54019858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 3862488 - 3862520
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  3862488 aaatttgtttaattatccttaaactcttaaatt 3862520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 3871245 - 3871277
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  3871245 aaatttgtttaattatccttaaactcttaaatt 3871277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 18093242 - 18093210
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  18093242 aaatttgtttaattatgcttaaacttttaaatt 18093210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 26415498 - 26415530
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||| |||||    
T  26415498 aaatttgtttaattatccttaaactttgaaatt 26415530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 39656768 - 39656736
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||||||||||||| ||||||    
T  39656768 aaatttgtttaattatccttaaacttctaaatt 39656736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Original strand, 21753 - 21782
Alignment:
Q  244 tttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||||||    
T  21753 tttgtttaattatccttaaacttttaaatt 21782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 6243478 - 6243511
Alignment:
Q  240 taaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||| ||||||||||||||||    
T  6243478 taaatttgtttaattatgcttaaacttttaaatt 6243511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Original strand, 34427230 - 34427263
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatta 274  Q
    |||||||||||||| |||||||||||||||||||    
T  34427230 aaatttgtttaattttccttaaacttttaaatta 34427263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Original strand, 41590340 - 41590369
Alignment:
Q  244 tttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||||||    
T  41590340 tttgtttaattatccttaaacttttaaatt 41590369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 36610800 - 36610832
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  36610800 aaatttgtttaattatgcttaaacttttaaatt 36610832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Original strand, 1544478 - 1544507
Alignment:
Q  244 tttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||||||    
T  1544478 tttgtttaattatccttaaacttttaaatt 1544507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Complemental strand, 37540078 - 37540049
Alignment:
Q  244 tttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||||||||    
T  37540078 tttgtttaattatccttaaacttttaaatt 37540049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 18059299 - 18059267
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  18059299 aaatttgtttaattatccttaaactcttaaatt 18059267  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 36039517 - 36039549
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  36039517 aaatttgtttaattatgcttaaacttttaaatt 36039549  T

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Target: scaffold1037 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1037
Description:

Target: scaffold1037; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 637 - 605
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  637 aaatttgtttaattatgcttaaacttttaaatt 605  T

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Target: scaffold1031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1031
Description:

Target: scaffold1031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 755 - 723
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  755 aaatttgtttaattatgcttaaacttttaaatt 723  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 235023 - 235055
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    |||||||||||||||| ||||||||||||||||    
T  235023 aaatttgtttaattatgcttaaacttttaaatt 235055  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 12482050 - 12482018
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  12482050 aaatttgtttaattatccttaaactcttaaatt 12482018  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 16736652 - 16736684
Alignment:
Q  241 aaatttgtttaattatccttaaacttttaaatt 273  Q
    ||||||||||||||||||||||||| |||||||    
T  16736652 aaatttgtttaattatccttaaactcttaaatt 16736684  T

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