View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16930_low_34 (Length: 237)
Name: NF16930_low_34
Description: NF16930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16930_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 14511066 - 14510849
Alignment:
| Q |
3 |
aactcttcgttctcaataggaatcgtatgtgttgagtctggagttcttccacttggtaataatagaattgtaactccacgtatctaaaccgcgaatagnn |
102 |
Q |
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| T |
14511066 |
aactcttcattctcaataggaatcgtatgtgttgagtctcgagttcttccacttggtaataatagaattgtaactccacgtatctaaaccgcgaatagtt |
14510967 |
T |
|
| Q |
103 |
nnnnnnncttcatataaatgtgttcctactaccaccataactatatatgaaaaataaacaacaaacatcacaaagaatatactccatgatcttatcgtat |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14510966 |
tttttttcttcatataaatgtgttcctactaccaccataactatatatgaaaaataaacaacaaacatcacaaagaatatactccatgatcttatcgtat |
14510867 |
T |
|
| Q |
203 |
acacccatatgttcatta |
220 |
Q |
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|||||||||||||||||| |
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| T |
14510866 |
acacccatatgttcatta |
14510849 |
T |
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